BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007002
(622 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255562314|ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
gi|223538602|gb|EEF40205.1| DNA gyrase subunit B, putative [Ricinus communis]
Length = 732
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/622 (87%), Positives = 592/622 (95%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNA+DEAQAGYAS ++V L +DNSVS++DNGRGIP DLHP
Sbjct: 111 MYIGSTGPRGLHHLVYEILDNAIDEAQAGYASRVDVILHSDNSVSISDNGRGIPTDLHPV 170
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGGS+SGYSVSGGLHGVGLSVVNALSE LEVTVWRDGMEY Q
Sbjct: 171 TKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEGLEVTVWRDGMEYRQ 230
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG PVT L CH L V+S+DRQGT +RFWPDK+VFTTAI+FD+NTIAGR+RELAFLNP
Sbjct: 231 RYSRGNPVTILMCHSLAVESRDRQGTCVRFWPDKEVFTTAIEFDYNTIAGRVRELAFLNP 290
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
KLTI L+KED+DPEKNQY+EYF+AGGL EYV+WLNTDKKPLHDVVGF K++DGITID+AL
Sbjct: 291 KLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLNTDKKPLHDVVGFGKEIDGITIDMAL 350
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDT+LGYANSIRTIDGGTHI+G KASLTRTLNSLGKKSK +K+KDI+LSGEHV
Sbjct: 351 QWCSDAYSDTILGYANSIRTIDGGTHIDGFKASLTRTLNSLGKKSKIIKEKDINLSGEHV 410
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCI+SV+VP+PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS
Sbjct: 411 REGLTCIVSVKVPSPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 470
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAK+AR+LVRQKSVLR+SSLPGKLADCSST PEESEIFIVEGDSAGGSAKQG
Sbjct: 471 LNALKAALAAKKARELVRQKSVLRTSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQG 530
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIII
Sbjct: 531 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII 590
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LF+EGCIYVGVPPLYKVERGKQV YCYD+AELKK+
Sbjct: 591 LTDADVDGAHIRTLLLTFFFRYQKALFEEGCIYVGVPPLYKVERGKQVYYCYDEAELKKL 650
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+SSFP NA Y+IQRFKGLGEMMP+QLWETT++PEQR+LKQLV+EDAAEANVVFSSLMGAR
Sbjct: 651 RSSFPQNASYNIQRFKGLGEMMPLQLWETTMDPEQRLLKQLVVEDAAEANVVFSSLMGAR 710
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ++A VN+D LDI
Sbjct: 711 VDVRKELIQSSARAVNIDLLDI 732
>gi|224086827|ref|XP_002307976.1| predicted protein [Populus trichocarpa]
gi|222853952|gb|EEE91499.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/622 (85%), Positives = 583/622 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS I V L +DNS+S+ DNGRGIP DLH
Sbjct: 32 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASKINVVLHSDNSISITDNGRGIPTDLHQV 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGGS+SGYSVSGGLHGVGLSVVNALSE LEVTVWRDG EY Q
Sbjct: 92 TKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEELEVTVWRDGKEYQQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG PVTTL C+ L +SKD++GTRIRFWPDK+VFTT IQFD+NT+ GR+RELAFLNP
Sbjct: 152 KYSRGNPVTTLMCYELSAESKDQKGTRIRFWPDKEVFTTEIQFDYNTVGGRVRELAFLNP 211
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
KL I+L+KED+DPEKNQY+E+F+AGGL EYV WLNTDKK LHDVV FRK+VDGI ID+AL
Sbjct: 212 KLAISLKKEDNDPEKNQYDEHFYAGGLIEYVNWLNTDKKSLHDVVSFRKEVDGIAIDMAL 271
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDT+LGYANSIRT+DGGTHI+GVKASLTRTLN+ GKKSK +KDKDISLSGEHV
Sbjct: 272 QWCSDAYSDTILGYANSIRTVDGGTHIDGVKASLTRTLNNFGKKSKVIKDKDISLSGEHV 331
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCIISV+VP+PEFEGQTKTRLGNPEVRKVV+QSVQEYLTEYLELHPDVLDSILSKS
Sbjct: 332 REGLTCIISVKVPSPEFEGQTKTRLGNPEVRKVVEQSVQEYLTEYLELHPDVLDSILSKS 391
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQG
Sbjct: 392 LNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQG 451
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ER+DE AMYKNEEIQNLI ALGLGVKGEDFKK+ALRYH+III
Sbjct: 452 RDRRFQAILPLRGKILNIERRDEEAMYKNEEIQNLILALGLGVKGEDFKKDALRYHRIII 511
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQV YC+DDAEL+KV
Sbjct: 512 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVYYCFDDAELRKV 571
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+SSFP NA Y++QRFKGLGEMMP QLWETT++PEQR+LKQLV+EDAAEA+VVFSSLMG R
Sbjct: 572 QSSFPQNASYNMQRFKGLGEMMPAQLWETTMDPEQRLLKQLVVEDAAEASVVFSSLMGTR 631
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ AA ++N+DHLDI
Sbjct: 632 VDGRKELIQKAARMINVDHLDI 653
>gi|297739950|emb|CBI30132.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/622 (86%), Positives = 584/622 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS ++V LLAD+SVS+ DNGRGIP +LHP
Sbjct: 86 MYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELHPV 145
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGMEY Q
Sbjct: 146 TKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQ 205
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKPVT+LT VLP +S D QGT IRFWPDK+VFTT IQFD+NTIAGRIRELAFLNP
Sbjct: 206 KYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNP 265
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+L I LRKED DPEKNQYNEY +AGGL EYV+WLNTDKKP+HDVVGFRK DGI+ID+AL
Sbjct: 266 ELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVAL 325
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK +K+KDI+LSGEHV
Sbjct: 326 QWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHV 385
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC+ISV+VPNPEFEGQTKTRLGNPEVRKVVDQ+VQE+LTEYLELHPDVLD ILSKS
Sbjct: 386 REGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKS 445
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQG
Sbjct: 446 LNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQG 505
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYK+EEIQNLI LGLGVKGEDFKKEALRYHKIII
Sbjct: 506 RDRRFQAILPLRGKILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIII 565
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPL+KVERGKQV YCYDDAELK++
Sbjct: 566 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQL 625
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ S P NA YSIQRFKGLGEMMPVQLWETT++PE+R+LKQLV+EDAAEANVVFSSLMGAR
Sbjct: 626 QHSLPPNASYSIQRFKGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGAR 685
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ +A+ + LD LDI
Sbjct: 686 VDFRKELIQKSASTMKLDQLDI 707
>gi|225441215|ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 719
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/622 (86%), Positives = 584/622 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS ++V LLAD+SVS+ DNGRGIP +LHP
Sbjct: 98 MYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELHPV 157
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGMEY Q
Sbjct: 158 TKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQ 217
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKPVT+LT VLP +S D QGT IRFWPDK+VFTT IQFD+NTIAGRIRELAFLNP
Sbjct: 218 KYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNP 277
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+L I LRKED DPEKNQYNEY +AGGL EYV+WLNTDKKP+HDVVGFRK DGI+ID+AL
Sbjct: 278 ELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVAL 337
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK +K+KDI+LSGEHV
Sbjct: 338 QWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHV 397
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC+ISV+VPNPEFEGQTKTRLGNPEVRKVVDQ+VQE+LTEYLELHPDVLD ILSKS
Sbjct: 398 REGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKS 457
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQG
Sbjct: 458 LNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQG 517
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYK+EEIQNLI LGLGVKGEDFKKEALRYHKIII
Sbjct: 518 RDRRFQAILPLRGKILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIII 577
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPL+KVERGKQV YCYDDAELK++
Sbjct: 578 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQL 637
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ S P NA YSIQRFKGLGEMMPVQLWETT++PE+R+LKQLV+EDAAEANVVFSSLMGAR
Sbjct: 638 QHSLPPNASYSIQRFKGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGAR 697
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ +A+ + LD LDI
Sbjct: 698 VDFRKELIQKSASTMKLDQLDI 719
>gi|75288399|sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|38017095|gb|AAR07943.1| DNA gyrase B subunit [Nicotiana benthamiana]
Length = 731
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/622 (86%), Positives = 591/622 (95%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAG+A+ I+V L ADNSVS+ADNGRGIP +LHP
Sbjct: 110 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPV 169
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGGSSSGY+VSGGLHGVGLSVVNALS++LEVT+WRDG EY Q
Sbjct: 170 TKKSSLETVLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQ 229
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKP+TTL CH LPV+ +DRQGT IRFWPDK+VFTT +QFD+NTIAGRIRELAFLNP
Sbjct: 230 KYSRGKPITTLICHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNP 289
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTIAL+KED DPEK Q NEYF+AGGL EYV+WLN DKKPLHDV+GFRK+ DGITID+AL
Sbjct: 290 ELTIALKKEDIDPEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMAL 349
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHI+GVKA+LTR LN+LGKKSKT+K+KDISLSGEHV
Sbjct: 350 QWCSDAYSDTMLGYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHV 409
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC+ISV+VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS
Sbjct: 410 REGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 469
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCS+T PEE+EIFIVEGDSAGGSAKQG
Sbjct: 470 LNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQG 529
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIII
Sbjct: 530 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII 589
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LF+EGCIYVGVPPLYKVERGKQV YCYDDAELKKV
Sbjct: 590 LTDADVDGAHIRTLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKV 649
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ SFPSNA Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV+EDAAEANVVFSSLMG+R
Sbjct: 650 QRSFPSNASYNIQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSR 709
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RK+LIQN+A+++NL+ LDI
Sbjct: 710 VDIRKQLIQNSASMMNLEQLDI 731
>gi|356504692|ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 726
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/622 (84%), Positives = 582/622 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDN+VDEAQAG+AS I V L AD+SVS+ DNGRGIP DLHP
Sbjct: 105 MYIGSTGPRGLHHLVYEILDNSVDEAQAGFASKIYVVLHADDSVSITDNGRGIPTDLHPV 164
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
TNKSALETVLTVLHAGGKFGG++SGYSVSGGLHGVGLSVVNALSESLE+TVWRDGMEY Q
Sbjct: 165 TNKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYMQ 224
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKPV+ L C VLP + KD +GTR+RFWPDK+VFTTAIQFDHNTIAGRIRELAFLNP
Sbjct: 225 TYSRGKPVSILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNP 284
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
KLTI LRKED+DPEK QYNEYF+AGGL EYV+WLNTDKK LHDV+ FRK+ DGIT+D+A
Sbjct: 285 KLTITLRKEDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAF 344
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWC DAYSDT+LGYANSIRTIDGGTHI+ +KAS+TRTLNSLGKKSK +K+KDI+LSGEHV
Sbjct: 345 QWCEDAYSDTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHV 404
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC++SV+VPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+
Sbjct: 405 REGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKA 464
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+A KAALAAKRAR+LVRQKSVLRSSSLPGKLADCSST PEE EIFIVEGDSAGGSAKQG
Sbjct: 465 LNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQG 524
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIII
Sbjct: 525 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIII 584
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKV RGKQV YCYDDA+LKK+
Sbjct: 585 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKL 644
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ SFP+NA Y++QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDAAEAN+VFSSLMG R
Sbjct: 645 QRSFPANASYNMQRFKGLGEMMPLQLWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTR 704
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELI+N+A+L++L LDI
Sbjct: 705 VDVRKELIRNSASLIDLHQLDI 726
>gi|224139720|ref|XP_002323244.1| predicted protein [Populus trichocarpa]
gi|222867874|gb|EEF05005.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/622 (84%), Positives = 580/622 (93%), Gaps = 8/622 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAGYAS I V L +DNSVS+ DNGRGIP DLHP
Sbjct: 87 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASTINVVLHSDNSVSITDNGRGIPTDLHPE 146
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGGS+SGY VSGGLHGVGLSVVNALSE LEVTVWRDG +Y Q
Sbjct: 147 TKKSALETVLTVLHAGGKFGGSNSGYRVSGGLHGVGLSVVNALSEELEVTVWRDGKQYQQ 206
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG PVTTLTCH LPV+SK+R+GT I+FWPDK+VFTT IQFD++TIAGR+RELAFLNP
Sbjct: 207 KYSRGNPVTTLTCHELPVESKERRGTHIKFWPDKEVFTTEIQFDYHTIAGRVRELAFLNP 266
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K D+DPEKNQ++E+F+AGGL EYV WLNTDKKPLHDV+GFRK+VDGI ID+AL
Sbjct: 267 K--------DNDPEKNQFDEHFYAGGLVEYVNWLNTDKKPLHDVLGFRKEVDGIAIDMAL 318
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDT+LGYANSIRT+DGGTHI+G KASLTRTLN+LGKKSK +KDKD+SLSGEHV
Sbjct: 319 QWCSDAYSDTILGYANSIRTVDGGTHIDGAKASLTRTLNNLGKKSKVIKDKDMSLSGEHV 378
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCIISV+VP+PEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPD LDSILSKS
Sbjct: 379 REGLTCIISVKVPSPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDALDSILSKS 438
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQG
Sbjct: 439 LNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQG 498
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIII
Sbjct: 499 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIII 558
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQ YC+DDAELKK+
Sbjct: 559 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAYYCFDDAELKKI 618
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ SFP NA Y+IQRFKGLGEMMP QLWETT++PE+R+LKQLV+EDAAEAN+VFSSLMG R
Sbjct: 619 QRSFPQNASYNIQRFKGLGEMMPAQLWETTMDPERRVLKQLVVEDAAEANIVFSSLMGTR 678
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQNAA+++N+DHLDI
Sbjct: 679 VDFRKELIQNAASMINVDHLDI 700
>gi|356571931|ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 724
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/622 (84%), Positives = 581/622 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V LLAD+SVS+ DNGRGIP DLHP
Sbjct: 103 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLLADDSVSITDNGRGIPTDLHPV 162
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
TNKSALETVLTVLHAGGKFGG++SGYSVSGGLHGVGLSVVNALSE LE+TVWRDGMEY Q
Sbjct: 163 TNKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSELLEITVWRDGMEYMQ 222
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKPV+ L C VLP + KD +GTR+RFWPDK+VFTTAIQFDHNTIAGRIRELAFLNP
Sbjct: 223 TYSRGKPVSILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNP 282
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
KLTI RKED+DPEK QYNEYF+AGGL EYV+WLNTDKK LHDV+ FRK+ DGIT+D+A
Sbjct: 283 KLTITFRKEDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAF 342
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QW DAYSDT+LGYANSIRTIDGGTHI+ +KAS+TRTLNSLGKKSK +K+KDI+LSGEHV
Sbjct: 343 QWSEDAYSDTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHV 402
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC++SV+VPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+
Sbjct: 403 REGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKA 462
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+A KAALAAKRAR+LVRQKSVLRSSSLPGKLADCSST PEE EIFIVEGDSAGGSAKQG
Sbjct: 463 LNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQG 522
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIII
Sbjct: 523 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIII 582
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKV RGKQV YCYDDA+LKK+
Sbjct: 583 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKL 642
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ SFP NA Y++QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDAAEAN+VFSSLMG R
Sbjct: 643 QRSFPPNASYNMQRFKGLGEMMPLQLWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTR 702
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELI+N+A++++LD LDI
Sbjct: 703 VDFRKELIRNSASMIDLDQLDI 724
>gi|297810505|ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
gi|297318973|gb|EFH49395.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
Length = 729
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/622 (84%), Positives = 579/622 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNA+DEAQAG+AS ++V L AD SVSV DNGRGIP DLHPA
Sbjct: 108 MYIGSTGPRGLHHLVYEILDNAIDEAQAGFASKVDVVLHADGSVSVVDNGRGIPTDLHPA 167
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGME+ Q
Sbjct: 168 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEHKQ 227
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+TTLTC VL ++S+ +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNP
Sbjct: 228 NYSRGKPITTLTCRVLTLESERTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNP 287
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI+L+KED DPEKNQY+EY+FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+AL
Sbjct: 288 KVTISLKKEDDDPEKNQYSEYYFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVAL 347
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHV
Sbjct: 348 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNALAKKSKTVKEKDISLSGEHV 407
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCI+SV++PNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPDVL+SI+SKS
Sbjct: 408 REGLTCIVSVKIPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDVLESIVSKS 467
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQG
Sbjct: 468 LNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEASEIFIVEGDSAGGSAKQG 527
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHKIII
Sbjct: 528 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIII 587
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK YCYDDA+LKK+
Sbjct: 588 LTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKHAHYCYDDADLKKI 647
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
S+FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLMGAR
Sbjct: 648 TSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGAR 707
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELI+NAA +NL LDI
Sbjct: 708 VDVRKELIKNAATRINLQRLDI 729
>gi|18414465|ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA gyrase subunit B, mitochondrial; Flags: Precursor
gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13 [Arabidopsis thaliana]
gi|22655426|gb|AAM98305.1| At3g10270/F14P13_13 [Arabidopsis thaliana]
gi|332003319|gb|AED90702.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 732
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/622 (84%), Positives = 578/622 (92%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DLHPA
Sbjct: 111 MYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPA 170
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME+ Q
Sbjct: 171 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQ 230
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNP
Sbjct: 231 NYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNP 290
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+AL
Sbjct: 291 KVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVAL 350
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHV
Sbjct: 351 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHV 410
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+SKS
Sbjct: 411 REGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKS 470
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQG
Sbjct: 471 LNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQG 530
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHKIII
Sbjct: 531 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIII 590
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK QYCYDDA+LKK+
Sbjct: 591 LTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKI 650
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
S+FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLMGAR
Sbjct: 651 TSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGAR 710
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELI+NAA +NL LDI
Sbjct: 711 VDVRKELIKNAATRINLQRLDI 732
>gi|449488224|ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/622 (85%), Positives = 578/622 (92%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L ADNSVSVADNGRGIP DLHP
Sbjct: 98 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPV 157
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEV++WRDG E+HQ
Sbjct: 158 TKKSSLETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQ 217
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKP + LT HV + K+ QGT IRFWPDK+VFTT IQFD+NTI+GRIRELAFLNP
Sbjct: 218 KYSRGKPTSILTSHVPSSELKNHQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNP 277
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
KLTIAL KED+D EKNQYNEY +AGGL EYV WLN+DK P+H+V GFRK+ DG+ ID+AL
Sbjct: 278 KLTIALTKEDNDLEKNQYNEYCYAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVAL 337
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWC+DAYSDT+LGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK KDKDISLSGEHV
Sbjct: 338 QWCADAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHV 397
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC++SVRV NPEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPDVL+ ILSKS
Sbjct: 398 REGLTCVVSVRVRNPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKS 457
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVLRSSSLPGKLADCSS PEESEIFIVEGDSAGGSAKQG
Sbjct: 458 LNALKAALAAKRARELVRQKSVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQG 517
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEI NLIRALGLG KGEDFKK+ALRYHKIII
Sbjct: 518 RDRRFQAILPLRGKILNIERKDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIII 577
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQV YCYDD ELKKV
Sbjct: 578 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKV 637
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+SSFPSNA Y+IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG R
Sbjct: 638 QSSFPSNASYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVR 697
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ +A+ +NL+HLDI
Sbjct: 698 VDFRKELIQKSASTMNLEHLDI 719
>gi|9955568|emb|CAC05495.1| DNA gyrase subunit B-like protein [Arabidopsis thaliana]
Length = 760
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/652 (80%), Positives = 578/652 (88%), Gaps = 30/652 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DLHPA
Sbjct: 109 MYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPA 168
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME+ Q
Sbjct: 169 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQ 228
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ------------------------- 155
YSRGKP+TTLTC VLP++SK +GT IRFWPDK+
Sbjct: 229 NYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEGFACFPLLTTLPKPKLDLMINFPLW 288
Query: 156 -----VFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEY 210
VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+KED DPEK QY+EY FAGGL EY
Sbjct: 289 NELFSVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEY 348
Query: 211 VQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 270
V WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV
Sbjct: 349 VSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 408
Query: 271 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 330
KASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEV
Sbjct: 409 KASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEV 468
Query: 331 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 390
RK+VDQSVQEYLTE+LELHPD+L+SI+SKSL+A KAALAAKRAR+LVR KSVL+SSSLPG
Sbjct: 469 RKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAALAAKRARELVRSKSVLKSSSLPG 528
Query: 391 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 450
KLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYKNE
Sbjct: 529 KLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKNE 588
Query: 451 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 510
EIQNLI LGLGVKGEDFKKE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFD G
Sbjct: 589 EIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAG 648
Query: 511 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 570
CIYVGVPPL+KVERGK QYCYDDA+LKK+ S+FP+NA Y+IQRFKGLGEMMP QLWETT
Sbjct: 649 CIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQLWETT 708
Query: 571 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+NPE R+LKQLV++D AEAN+ FSSLMGARVD RKELI+NAA +NL LDI
Sbjct: 709 MNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 760
>gi|449453173|ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/622 (85%), Positives = 577/622 (92%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L ADNSVSVADNGRGIP DLHP
Sbjct: 98 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASQIDVVLHADNSVSVADNGRGIPTDLHPV 157
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEV++WRDG E+HQ
Sbjct: 158 TKKSSLETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQ 217
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKP + LT HV + K+ QGT IRFWPDK+VFTT IQFD+NTI+GRIRELAFLNP
Sbjct: 218 KYSRGKPASILTSHVPSSELKNHQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNP 277
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
KLTI L KED+D EKNQYNEY +AGGL EYV WLN+DK P+H+V GFRK+ DG+ ID+AL
Sbjct: 278 KLTITLTKEDNDLEKNQYNEYCYAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVAL 337
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWC+DAYSDT+LGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK KDKDISLSGEHV
Sbjct: 338 QWCADAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHV 397
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC++SVRV NPEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPDVL+ ILSKS
Sbjct: 398 REGLTCVVSVRVRNPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKS 457
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVRQKSVLRSSSLPGKLADCSS PEESEIFIVEGDSAGGSAKQG
Sbjct: 458 LNALKAALAAKRARELVRQKSVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQG 517
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEI NLIRALGLG KGEDFKK+ALRYHKIII
Sbjct: 518 RDRRFQAILPLRGKILNIERKDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIII 577
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQV YCYDD ELKKV
Sbjct: 578 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKV 637
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+SSFPSNA Y+IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG R
Sbjct: 638 QSSFPSNASYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVR 697
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ +A+ +NL+HLDI
Sbjct: 698 VDFRKELIQKSASTMNLEHLDI 719
>gi|378405244|sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chloroplastic; Flags: Precursor
Length = 730
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/622 (84%), Positives = 578/622 (92%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+SVS++DNGRGIP DLHPA
Sbjct: 109 MYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPA 168
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ Q
Sbjct: 169 TGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQ 228
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELAFLNP
Sbjct: 229 KYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNP 288
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D++L
Sbjct: 289 KVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSL 348
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLSGEHV
Sbjct: 349 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHV 408
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKS
Sbjct: 409 REGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKS 468
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGSAKQG
Sbjct: 469 LNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQG 528
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYHKIII
Sbjct: 529 RDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIII 588
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA LKK+
Sbjct: 589 LTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKI 648
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+SFP NA Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV++DAAE N+VFSSLMGAR
Sbjct: 649 TASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGAR 708
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELI++AA +NL++LDI
Sbjct: 709 VDVRKELIKSAATRMNLENLDI 730
>gi|297833810|ref|XP_002884787.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
gi|297330627|gb|EFH61046.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/625 (83%), Positives = 579/625 (92%), Gaps = 3/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+SVS++DNGRGIP DLHPA
Sbjct: 33 MYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPA 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ Q
Sbjct: 93 TGKSALETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQFDHNTIAGRIRELAF 177
KYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+ +FTTAIQFDHNTIAGRIRELAF
Sbjct: 153 KYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEGFALFTTAIQFDHNTIAGRIRELAF 212
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
LNPK+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D
Sbjct: 213 LNPKVTISLKKEDDDPERDLYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVD 272
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLSG
Sbjct: 273 VSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSG 332
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
EHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+
Sbjct: 333 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESII 392
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGSA
Sbjct: 393 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSA 452
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYHK
Sbjct: 453 KQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHK 512
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
IIILTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA L
Sbjct: 513 IIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAAL 572
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
KK+ +SFP+NA Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV+EDAAE N+VFSSLM
Sbjct: 573 KKITASFPANASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVEDAAETNMVFSSLM 632
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
GARVD RKELI++AA +NL++LDI
Sbjct: 633 GARVDVRKELIKSAATRMNLENLDI 657
>gi|6056198|gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/625 (83%), Positives = 578/625 (92%), Gaps = 3/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+SVS++DNGRGIP DLHPA
Sbjct: 33 MYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPA 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ Q
Sbjct: 93 TGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQFDHNTIAGRIRELAF 177
KYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+ +FTTAIQFDHNTIAGRIRELAF
Sbjct: 153 KYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEGFALFTTAIQFDHNTIAGRIRELAF 212
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
LNPK+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D
Sbjct: 213 LNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVD 272
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLSG
Sbjct: 273 VSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSG 332
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
EHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+
Sbjct: 333 EHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESII 392
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGSA
Sbjct: 393 SKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSA 452
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYHK
Sbjct: 453 KQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHK 512
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
IIILTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA L
Sbjct: 513 IIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAAL 572
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
KK+ +SFP NA Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV++DAAE N+VFSSLM
Sbjct: 573 KKITASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLM 632
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
GARVD RKELI++AA +NL++LDI
Sbjct: 633 GARVDVRKELIKSAATRMNLENLDI 657
>gi|334185208|ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332641361|gb|AEE74882.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 772
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/654 (79%), Positives = 578/654 (88%), Gaps = 32/654 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAG+AS I+V L +D+SVS++DNGRGIP DLHPA
Sbjct: 119 MYIGSTGSRGLHHLVYEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPA 178
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ Q
Sbjct: 179 TGKSSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQ 238
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKPVTTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELAFLNP
Sbjct: 239 KYSRGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNP 298
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI+L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D++L
Sbjct: 299 KVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSL 358
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK----------- 289
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K
Sbjct: 359 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKVKGYIIYSSPW 418
Query: 290 ---------------------DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 328
+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLGNP
Sbjct: 419 IETKFKYSSALKRHALRTINNEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNP 478
Query: 329 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 388
EVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+SSSL
Sbjct: 479 EVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSSSL 538
Query: 389 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
PGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYK
Sbjct: 539 PGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYK 598
Query: 449 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 508
NEEIQNLI LGLGVKGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFD
Sbjct: 599 NEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFD 658
Query: 509 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 568
GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP NA Y+IQRFKGLGEMMP QLWE
Sbjct: 659 AGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQLWE 718
Query: 569 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
TT+NP+ R+LKQLV++DAAE N+VFSSLMGARVD RKELI++AA +NL++LDI
Sbjct: 719 TTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 772
>gi|326518120|dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/622 (79%), Positives = 563/622 (90%), Gaps = 1/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAGYA+ I V L DNSVSV DNGRGIP D+HP
Sbjct: 102 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYATEINVVLHDDNSVSVTDNGRGIPTDIHPQ 161
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS+S YSV+GGLHGVGLSVVNALSE+LEVTV RDG EY Q
Sbjct: 162 TKKSCVETVLTLMHAGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALEVTVCRDGKEYRQ 221
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+T L+ LP +S RQG+ IRFWPDK++FTT I+FD +TI+ RIRELAFLNP
Sbjct: 222 HYSRGKPLTMLSSTTLPDESSSRQGSCIRFWPDKEIFTTTIEFDFSTISSRIRELAFLNP 281
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTI L KE+ D + Q+NEY +AGGL EYV WLNTDKKPLHD + FRK++DGI +D++L
Sbjct: 282 ELTITLTKEEQDAQV-QHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSL 340
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSD+YSDT+LGYANSIRTIDGGTHIEG+K SLTRT+N+ KKSK +KDKDISLSGEHV
Sbjct: 341 QWCSDSYSDTVLGYANSIRTIDGGTHIEGLKTSLTRTINNFAKKSKIMKDKDISLSGEHV 400
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TCIISV+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKS
Sbjct: 401 REGMTCIISVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 460
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ P E EIFIVEGDSAGGSAKQG
Sbjct: 461 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSNPAECEIFIVEGDSAGGSAKQG 520
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR+FQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKI+I
Sbjct: 521 RDRKFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIVI 580
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQV YCYD+A+LK +
Sbjct: 581 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVHYCYDEADLKDL 640
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y+ QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDA EANVVFSSLMGAR
Sbjct: 641 VNTFPTNASYNTQRFKGLGEMMPLQLWETTMDPERRLLKQLTVEDAVEANVVFSSLMGAR 700
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
V+ RKELIQ AA++VNLDHLDI
Sbjct: 701 VEYRKELIQKAASIVNLDHLDI 722
>gi|357130405|ref|XP_003566839.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
Length = 723
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/622 (79%), Positives = 560/622 (90%), Gaps = 1/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAGYA+ I V L DNSVSV DNGRGIP D+HP
Sbjct: 103 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYATKINVVLHDDNSVSVTDNGRGIPTDIHPQ 162
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS+S YSV+GGLHGVGLSVVNALSE+L+VTV+RDG EY Q
Sbjct: 163 TKKSCVETVLTLMHAGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALDVTVYRDGKEYRQ 222
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+TTL+ + +S RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP
Sbjct: 223 SYSRGKPLTTLSSTTVYGESSTRQGTCIRFWPDKDIFTTTIGFDFNTISSRIRELAFLNP 282
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTI L KE+ D E +NEY +AGGL EYV WLNTDKKPLHD + FRK++DGI +D++L
Sbjct: 283 ELTITLTKEEDDAEV-LHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSL 341
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSD+YSDT+LGYANSIRTIDGGTHIEG+K SLTRT+NS K SK +KDKDISLSGEHV
Sbjct: 342 QWCSDSYSDTVLGYANSIRTIDGGTHIEGLKTSLTRTVNSFAKNSKAIKDKDISLSGEHV 401
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TCII+V+VPNPEFEGQTKTRLGNPEVRK+V+QSVQE LTEYLELHPDVLDSILSKS
Sbjct: 402 REGMTCIIAVKVPNPEFEGQTKTRLGNPEVRKIVEQSVQENLTEYLELHPDVLDSILSKS 461
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ P ESEIFIVEGDSAGGSAKQG
Sbjct: 462 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSNPAESEIFIVEGDSAGGSAKQG 521
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR+FQAILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIII
Sbjct: 522 RDRKFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII 581
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYK+ERGKQ YCYD+A+LK++
Sbjct: 582 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKIERGKQAHYCYDEADLKEL 641
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y+ QRFKGLGEMMPVQLWETT++P +R+LKQL +EDAAEANVVFSSLMG+R
Sbjct: 642 VNTFPTNASYNTQRFKGLGEMMPVQLWETTMDPARRLLKQLTVEDAAEANVVFSSLMGSR 701
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RKELIQ AA +VNL+HLDI
Sbjct: 702 VDYRKELIQKAAGMVNLEHLDI 723
>gi|242052563|ref|XP_002455427.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
gi|241927402|gb|EES00547.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
Length = 729
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/622 (79%), Positives = 562/622 (90%), Gaps = 2/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDE QAG+AS I+V L DNSVSV DNGRGIP D+HP
Sbjct: 110 MYIGSTGPRGLHHLVYEILDNAVDEGQAGHASKIDVVLHDDNSVSVTDNGRGIPTDMHPQ 169
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG +Y Q
Sbjct: 170 TKKSCVETVLTLMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGNKYRQ 229
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP T L+ L ++ RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP
Sbjct: 230 SYSRGKPTTPLSSITLTGETSPRQGTSIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNP 289
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTI L KE+ Q+NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+D++L
Sbjct: 290 ELTITLTKEEG--HTVQHNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSL 347
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QW SD+YSDT+LGYANSIRTIDGGTHI+G+KASLTRT+N+ KKSKT+KDKDI+LSGEHV
Sbjct: 348 QWSSDSYSDTVLGYANSIRTIDGGTHIDGLKASLTRTINNFAKKSKTIKDKDITLSGEHV 407
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TC+ISV+VP+PEFEGQTKTRLGNPEVR++V+Q+VQE LTEYLELHPDVLDSILSKS
Sbjct: 408 REGMTCVISVKVPSPEFEGQTKTRLGNPEVRRIVEQAVQENLTEYLELHPDVLDSILSKS 467
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKA+LAAKRAR+LVR KSVL+SSS+PGKLADC+ST PEESEIFIVEGDSAGGSAKQG
Sbjct: 468 LNALKASLAAKRARELVRSKSVLKSSSIPGKLADCASTNPEESEIFIVEGDSAGGSAKQG 527
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI ALGLGVKGEDFKKEALRYHKI+I
Sbjct: 528 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVI 587
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++
Sbjct: 588 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEI 647
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP NA Y IQRFKGLGEMMPVQLWETT++PE+R+LKQL +EDAAEANVVFSSLMG+R
Sbjct: 648 VNTFPPNASYHIQRFKGLGEMMPVQLWETTMDPERRLLKQLKVEDAAEANVVFSSLMGSR 707
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
V+ RK+LIQ AA+ +++D LDI
Sbjct: 708 VEYRKQLIQEAASTISMDQLDI 729
>gi|115435866|ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group]
gi|75285839|sp|Q5NBJ3.1|GYRB_ORYSJ RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|56783730|dbj|BAD81142.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|56783751|dbj|BAD81163.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|113532222|dbj|BAF04605.1| Os01g0268300 [Oryza sativa Japonica Group]
Length = 729
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/622 (81%), Positives = 567/622 (91%), Gaps = 1/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ ++V L DNSVSV DNGRGIP D+HP
Sbjct: 109 MYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQ 168
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY Q
Sbjct: 169 TKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQ 228
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP
Sbjct: 229 NYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNP 288
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++L
Sbjct: 289 ELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSL 347
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHV
Sbjct: 348 QWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHV 407
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKS
Sbjct: 408 REGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 467
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQG
Sbjct: 468 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQG 527
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR+FQAILPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+I
Sbjct: 528 RDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 587
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++
Sbjct: 588 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEL 647
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG R
Sbjct: 648 VNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTR 707
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RK+LIQNAA++VNL+HLDI
Sbjct: 708 VDVRKQLIQNAASMVNLEHLDI 729
>gi|125569849|gb|EAZ11364.1| hypothetical protein OsJ_01229 [Oryza sativa Japonica Group]
Length = 753
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/622 (81%), Positives = 567/622 (91%), Gaps = 1/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ ++V L DNSVSV DNGRGIP D+HP
Sbjct: 133 MYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKVDVILHGDNSVSVTDNGRGIPTDIHPQ 192
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY Q
Sbjct: 193 TKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQ 252
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP
Sbjct: 253 NYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNP 312
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++L
Sbjct: 313 ELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSL 371
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHV
Sbjct: 372 QWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHV 431
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKS
Sbjct: 432 REGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 491
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQG
Sbjct: 492 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQG 551
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR+FQAILPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+I
Sbjct: 552 RDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 611
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++
Sbjct: 612 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEL 671
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG R
Sbjct: 672 VNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTR 731
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RK+LIQNAA++VNL+HLDI
Sbjct: 732 VDVRKQLIQNAASMVNLEHLDI 753
>gi|357509407|ref|XP_003624992.1| DNA gyrase subunit B [Medicago truncatula]
gi|355500007|gb|AES81210.1| DNA gyrase subunit B [Medicago truncatula]
Length = 839
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/735 (70%), Positives = 577/735 (78%), Gaps = 113/735 (15%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L AD+SVS+ADNGRGIP D+HP
Sbjct: 105 MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLHADDSVSIADNGRGIPTDMHPT 164
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSE+LEVTVWR+G+EY Q
Sbjct: 165 TKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQ 224
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKPVTTL C +LP ++KDRQGTRI+FWPDK+VFTTAI+F++NTIAGRIRELAFLNP
Sbjct: 225 TYSRGKPVTTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNP 284
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK---------------------- 218
KLTIALRKED+DPEK Q NEYF+AGGL EYVQ+LNTDK
Sbjct: 285 KLTIALRKEDNDPEKVQSNEYFYAGGLAEYVQFLNTDKESEGLFESDNGRWEGRFWYSGV 344
Query: 219 ----------------------KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYAN 256
K +HDV+ FRK++DGIT+D+ALQWC DAYSDT+LGYAN
Sbjct: 345 SESAADVSALICFSNSLAWSVLKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTILGYAN 404
Query: 257 SIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE-------------- 302
SIRT+DGGTHI+G+KASLTRTLNSLGKKSK +K + G +
Sbjct: 405 SIRTVDGGTHIDGMKASLTRTLNSLGKKSKVIKQFQLFFYGHDSKRQNEKRNSYYLLHNF 464
Query: 303 GL----------------TCII---------------------------SVRVPNPEFEG 319
GL TC + SV+VPNPEFEG
Sbjct: 465 GLWIVLLNRYQVIGRFRNTCFMPLTQNKCQEKDITLSGEHVREGLTCVVSVKVPNPEFEG 524
Query: 320 QTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQ 379
QTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAALAAKRAR+LVRQ
Sbjct: 525 QTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQ 584
Query: 380 KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ------------A 427
KSVLRSSSLPGKLADCSS+ PE+ EIFIVEGDSAGGSAKQGRDRRFQ A
Sbjct: 585 KSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQVKYTLSDESLQSA 644
Query: 428 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 487
ILPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILTDADVD
Sbjct: 645 ILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVD 704
Query: 488 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 547
GAHIRTLLLTFFYRYQ+ LFDEG IYVGVPPLYKV RGKQV YCYD+A+LKK+KSSF N
Sbjct: 705 GAHIRTLLLTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPN 764
Query: 548 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 607
A Y++QRFKGLGEMMP+QLWETT++PEQR+LK+L +EDAAEAN+VFSSLMGARVD RKEL
Sbjct: 765 ASYNMQRFKGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARVDVRKEL 824
Query: 608 IQNAANLVNLDHLDI 622
IQNAAN+++LD LDI
Sbjct: 825 IQNAANMIDLDQLDI 839
>gi|293336227|ref|NP_001168561.1| uncharacterized protein LOC100382343 [Zea mays]
gi|223949177|gb|ACN28672.1| unknown [Zea mays]
gi|414877013|tpg|DAA54144.1| TPA: hypothetical protein ZEAMMB73_725573 [Zea mays]
Length = 726
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/622 (80%), Positives = 562/622 (90%), Gaps = 2/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEILDNAVDEAQAG+AS I+V L DNSVSV DNGRGIP D+HP
Sbjct: 107 MYIGSTGPRGLHHLVYEILDNAVDEAQAGHASKIDVVLHDDNSVSVTDNGRGIPTDMHPQ 166
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG E+ Q
Sbjct: 167 TKKSCVETVLTLMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGKEHRQ 226
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP T LT L ++ RQGTRIRFWPDK +FTT I FD NTI+ RIRELAFLNP
Sbjct: 227 SYSRGKPTTRLTSSTLTGETSSRQGTRIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNP 286
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTI L KE+ Q NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+D++L
Sbjct: 287 ELTIILTKEEG--HTVQRNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSL 344
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QW SD+YSDT+LGYANSIRTIDGGTHI+G+KASLTRT+N+L KKSKT+KDKDI+LSGEHV
Sbjct: 345 QWSSDSYSDTVLGYANSIRTIDGGTHIDGLKASLTRTINNLAKKSKTIKDKDITLSGEHV 404
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TCIISV+VP+PEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKS
Sbjct: 405 REGMTCIISVKVPSPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 464
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S PEESEIFIVEGDSAGGSAKQG
Sbjct: 465 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASANPEESEIFIVEGDSAGGSAKQG 524
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLI ALGLGVKGEDFKKEALRYHKI+I
Sbjct: 525 RDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVI 584
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGK YCYDDA+LK++
Sbjct: 585 LTDADVDGAHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKLAHYCYDDADLKEI 644
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y IQRFKGLGEMMP QLWETT++PE+R+LKQL +EDAAEANVVFSSLMG R
Sbjct: 645 VNTFPANASYHIQRFKGLGEMMPAQLWETTMDPERRLLKQLRVEDAAEANVVFSSLMGTR 704
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
V+ RKELIQ AA+++N+D LDI
Sbjct: 705 VEYRKELIQKAASMINIDQLDI 726
>gi|125525330|gb|EAY73444.1| hypothetical protein OsI_01322 [Oryza sativa Indica Group]
Length = 647
Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/622 (78%), Positives = 551/622 (88%), Gaps = 20/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNAVDEAQAGYA+ I P D+HP
Sbjct: 46 MYIGSTGSRGLHHLVYEILDNAVDEAQAGYATKI-------------------PTDIHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY
Sbjct: 87 TKKSCVETVLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRL 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGK +T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP
Sbjct: 147 NYSRGKAITMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNP 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+LTIAL KE+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++L
Sbjct: 207 ELTIALTKEEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSL 265
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSD+YSDT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHV
Sbjct: 266 QWCSDSYSDTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHV 325
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+TCII+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKS
Sbjct: 326 REGMTCIIAVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKS 385
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+ALKAALAAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQG
Sbjct: 386 LNALKAALAAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQG 445
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR+FQAILPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+I
Sbjct: 446 RDRKFQAILPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 505
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++
Sbjct: 506 LTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEL 565
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
++FP+NA Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG R
Sbjct: 566 VNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTR 625
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
VD RK+LIQNAA++VNL+HLDI
Sbjct: 626 VDVRKQLIQNAASMVNLEHLDI 647
>gi|148906969|gb|ABR16629.1| unknown [Picea sitchensis]
Length = 737
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/622 (74%), Positives = 550/622 (88%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE+LDNA+DEAQAG+A+NI+V + D SVS+ D+GRGIP DLHP
Sbjct: 116 MYIGSTGPRGLHHLVYEVLDNAIDEAQAGFATNIDVIIFLDGSVSIMDDGRGIPTDLHPV 175
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T+KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE LEVTVWRDG E++Q
Sbjct: 176 THKSALETVLTVLHAGGKFGGESSGYSVSGGLHGVGLSVVNALSEKLEVTVWRDGKEWNQ 235
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKPVT LT + + + K RQGTR+RFWPDK+VFTT +FD+NTI GR RELAFLNP
Sbjct: 236 TFACGKPVTELTSNEILGEFKFRQGTRVRFWPDKEVFTTTTEFDYNTIVGRARELAFLNP 295
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
++ I L++E+ D E YNEY +AGGL EYV WLN DK P+ + F ++ DG+ +++AL
Sbjct: 296 QVKITLKQENKDAENVTYNEYHYAGGLVEYVCWLNRDKTPILKPISFTREKDGVIVNVAL 355
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAY+DT+LGYANSIRT DGG+H++GVK++LTRT N+LG+KSK +K+KD +LSGEHV
Sbjct: 356 QWCSDAYTDTLLGYANSIRTSDGGSHMDGVKSALTRTFNNLGRKSKLIKEKDENLSGEHV 415
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+SV+VP PEFEGQTKTRLGNPEVR++VDQ+VQEYLTEYLE +P VL+SILSK+
Sbjct: 416 REGLTGIVSVKVPKPEFEGQTKTRLGNPEVRRIVDQAVQEYLTEYLECNPGVLESILSKA 475
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L+A KAA+AAK+AR+LVR+KSVLR S+LPGKLADCS++ P E+EIFIVEG+SAGGSAKQG
Sbjct: 476 LNAYKAAMAAKKARELVRRKSVLRPSALPGKLADCSASDPREAEIFIVEGESAGGSAKQG 535
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI LGLG+KGEDFKK+ALRYHKIII
Sbjct: 536 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGLKGEDFKKDALRYHKIII 595
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LF+EG IYVGVPPLYKVERG+Q YC+D+ ELKK+
Sbjct: 596 LTDADVDGAHIRTLLLTFFFRYQRALFEEGYIYVGVPPLYKVERGRQAHYCFDEDELKKL 655
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ +FPSNA Y+IQRFKGLGEMMP+QLWETTL+P R LKQL +EDAAEAN+VFS LMG R
Sbjct: 656 QKTFPSNASYNIQRFKGLGEMMPLQLWETTLDPATRKLKQLTVEDAAEANMVFSLLMGNR 715
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
V+ RKELI+N+A+ ++++ LDI
Sbjct: 716 VEPRKELIENSASKISIEKLDI 737
>gi|168056555|ref|XP_001780285.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668339|gb|EDQ54949.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 640
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/625 (69%), Positives = 540/625 (86%), Gaps = 3/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE+LDNA+DEAQAG+AS ++V + D SVS++DNGRGIP D+HP
Sbjct: 16 MYIGSTGTKGLHHLVYEVLDNAIDEAQAGFASTVDVVIHTDGSVSISDNGRGIPTDVHPV 75
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVG+SVVNALSE ++VTVWR+G EY Q
Sbjct: 76 TRKSALETVLTVLHAGGKFGGESSGYSVSGGLHGVGISVVNALSERVDVTVWRNGHEYRQ 135
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQFDHNTIAGRIRELAF 177
+ GK V+ L+ LP D K R GTR++F PDKQ +FT+ +FD+NTI+GR RELAF
Sbjct: 136 SFEFGKAVSPLSAFPLPNDQKGRTGTRVKFLPDKQGKQLFTSTTEFDYNTISGRARELAF 195
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
LNP++TI L +E ++ EK + N Y F+GGL EYV WLN DK+ LH+ + ++ +G+ ID
Sbjct: 196 LNPQVTINLMQEHANSEKVRSNAYHFSGGLNEYVLWLNNDKERLHEPISIHREREGVAID 255
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQW +D Y+DT+LGYANSIRT DGGTH++G+KA++TRTLN+LG+K+K +K+KD +LSG
Sbjct: 256 VALQWSADQYTDTILGYANSIRTSDGGTHLDGMKAAVTRTLNTLGRKAKILKEKDENLSG 315
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+H REGLTC+++V+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE +TEYLE HP+ L++IL
Sbjct: 316 DHAREGLTCVVAVKVPNPEFEGQTKTRLGNPEVRRIVDQAVQELVTEYLEQHPNTLEAIL 375
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
SK+L A +AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P +EIFIVEGDSAGGSA
Sbjct: 376 SKALQAFRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDPRNAEIFIVEGDSAGGSA 435
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQAILPLRGKILN+ERKD+AA+YKN+EIQNLI ALGLGVKGE+F K++LRYHK
Sbjct: 436 KQGRDRRFQAILPLRGKILNIERKDDAAIYKNQEIQNLILALGLGVKGEEFSKDSLRYHK 495
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
IIILTDADVDGAHIRTLLLTFF+RYQ+ LF+ GCIYVGVPPLYKVERGKQ YC+++++L
Sbjct: 496 IIILTDADVDGAHIRTLLLTFFFRYQRALFEAGCIYVGVPPLYKVERGKQAHYCFNESDL 555
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K V +FPSNA Y+IQRFKGLGEMMP QLWETTL+P+QRMLK L +EDAAEA+++FS+LM
Sbjct: 556 KNVLKTFPSNASYNIQRFKGLGEMMPQQLWETTLDPQQRMLKLLTLEDAAEASMMFSTLM 615
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V+ RKELI+ A+ + L++LD+
Sbjct: 616 GDKVEPRKELIRTNASRMKLENLDL 640
>gi|168067741|ref|XP_001785766.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662596|gb|EDQ49430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 642
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/627 (68%), Positives = 542/627 (86%), Gaps = 5/627 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE+LDNA+DEAQAG+AS +++ + D SVS++DNGRGIP D+HP
Sbjct: 16 MYIGSTGAKGLHHLVYEVLDNAIDEAQAGFASTVDIVMHTDGSVSISDNGRGIPTDVHPV 75
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG +SGYSVSGGLHGVG+SVVNALSE ++VTVWR+G EY Q
Sbjct: 76 TGKSALETVLTVLHAGGKFGGDNSGYSVSGGLHGVGISVVNALSERVDVTVWRNGHEYKQ 135
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQ-----VFTTAIQFDHNTIAGRIREL 175
+ GK V+ L+ LP D K R GT ++F PDKQ +FT+ +FD++TI+GR REL
Sbjct: 136 SFEFGKSVSHLSGSRLPRDQKGRTGTLVKFLPDKQGKSFLMFTSTTEFDYSTISGRTREL 195
Query: 176 AFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGIT 235
AFLNP++TI L+++ ++PEK + N Y F+GGL EYV WLN DK+ LH+ + + +GI
Sbjct: 196 AFLNPQVTIYLKQDHANPEKIRSNTYHFSGGLSEYVLWLNNDKERLHEPISIHRKKEGII 255
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
ID++LQWC+D+Y+DT++GYANSIRT DGGTH++G+KA++TRTLN+LG+K+K +K+KD +L
Sbjct: 256 IDVSLQWCADSYTDTIIGYANSIRTSDGGTHLDGIKAAVTRTLNTLGRKAKILKEKDENL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SG+H REGLTC++SV+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE +TEYLE HP+ L++
Sbjct: 316 SGDHAREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRRLVDQAVQELVTEYLEQHPNTLEA 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
ILSK+L A +AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P+ SEIFIVEGDSAGG
Sbjct: 376 ILSKALQAFRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDPKNSEIFIVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPLRGKILN+ERKD+AA+YKN+EIQNLI ALGLGVKGE+F K+ LRY
Sbjct: 436 SAKQGRDRRYQAILPLRGKILNIERKDDAAIYKNQEIQNLILALGLGVKGEEFSKDLLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIIILTDADVDGAHIRTLLLTFF+RYQ+ LF+ GCIYVGVPPLYKVERGKQ YC+++A
Sbjct: 496 HKIIILTDADVDGAHIRTLLLTFFFRYQRALFESGCIYVGVPPLYKVERGKQAHYCFNEA 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK + +FPSNA Y+IQRFKGLGEMMP QLWETTL+P QRMLK L +EDAAEA+++FS+
Sbjct: 556 DLKNLLKTFPSNASYNIQRFKGLGEMMPQQLWETTLDPTQRMLKLLTLEDAAEASMMFST 615
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V+ RKELIQN A+ + L++LD+
Sbjct: 616 LMGDKVEPRKELIQNNASRMKLENLDL 642
>gi|302761372|ref|XP_002964108.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
gi|300167837|gb|EFJ34441.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
Length = 723
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/622 (66%), Positives = 511/622 (82%), Gaps = 4/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHL+YE+LDNA+DE QAG+A+ ++V L +D SVS+ DNGRGIP D+HPA
Sbjct: 106 MYIGSTGPRGLHHLIYEVLDNAIDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPA 165
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFGG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q
Sbjct: 166 TGKSTLETVLTVLHAGGKFGGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQ 225
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK V +LT LP +S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP
Sbjct: 226 VFQRGKAVGSLTTRSLPRESSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNP 285
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
++TI L++E + ++ + F GGL EYV+WLN DK +HD + F + D I++++++
Sbjct: 286 EVTINLKEESATTDE----VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSM 341
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDT+LGYANSIRT DGGTH++G+K LTRTLN LG++SK +++K +LSGEH
Sbjct: 342 QWCSDAYSDTLLGYANSIRTADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHA 401
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC+ISV+VP PEFEGQTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+
Sbjct: 402 REGLTCVISVKVPEPEFEGQTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKA 461
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A KAA AAK+AR+LVR+K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQG
Sbjct: 462 LQAYKAAEAAKKARELVRRKNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQG 521
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPL+GKILN+ERKD+AA+YKN+EIQ+LI ALGLG +GE+F K+ LRYHKIII
Sbjct: 522 RDRAFQAILPLKGKILNIERKDDAAIYKNQEIQDLIVALGLGTRGEEFHKDTLRYHKIII 581
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFD G IYVGVPPLYKVERGK YCY + EL+ +
Sbjct: 582 LTDADVDGAHIRTLLLTFFFRYQRALFDGGYIYVGVPPLYKVERGKHAHYCYSENELQGL 641
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+F +NA Y+IQRFKGLGEMMP+QLW+TTL+P +RMLK+L +EDA EA+ FS LMG +
Sbjct: 642 LGTFAANAPYNIQRFKGLGEMMPLQLWDTTLDPSKRMLKKLTLEDAVEASFTFSRLMGDK 701
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
V+ RKELI +A +LD+
Sbjct: 702 VEPRKELILKSAAQFKQQNLDV 723
>gi|302820792|ref|XP_002992062.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
gi|300140184|gb|EFJ06911.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
Length = 618
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/622 (66%), Positives = 511/622 (82%), Gaps = 4/622 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHL+YE+LDNA+DE QAG+A+ ++V L +D SVS+ DNGRGIP D+HPA
Sbjct: 1 MYIGSTGPRGLHHLIYEVLDNAIDEVQAGFATQVDVVLHSDGSVSITDNGRGIPTDVHPA 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFGG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q
Sbjct: 61 TGKSTLETVLTVLHAGGKFGGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQ 120
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK V +LT LP +S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP
Sbjct: 121 VFQRGKAVGSLTTRSLPRESSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNP 180
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
++TI L++E + ++ + F GGL EYV+WLN DK +HD + F + D I++++++
Sbjct: 181 EVTINLKEESATTDE----VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSM 236
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDT+LGYANSIRT DGGTH++G+K LTRTLN LG++SK +++K +LSGEH
Sbjct: 237 QWCSDAYSDTLLGYANSIRTADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHA 296
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTC+ISV+VP PEFEGQTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+
Sbjct: 297 REGLTCVISVKVPEPEFEGQTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKA 356
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A KAA AAK+AR+LVR+K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQG
Sbjct: 357 LQAYKAAEAAKKARELVRRKNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQG 416
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPL+GKILN+ERKD+AA+YKN+EIQ+LI ALGLG +GE+F K+ LRYHKIII
Sbjct: 417 RDRAFQAILPLKGKILNIERKDDAAIYKNQEIQDLIVALGLGTRGEEFHKDTLRYHKIII 476
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
LTDADVDGAHIRTLLLTFF+RYQ+ LFD G IYVGVPPLYKVERGK YCY + EL+ +
Sbjct: 477 LTDADVDGAHIRTLLLTFFFRYQRALFDGGYIYVGVPPLYKVERGKHAHYCYSENELQGL 536
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+F +NA Y+IQRFKGLGEMMP+QLW+TTL+P +RMLK+L +EDA EA+ FS LMG +
Sbjct: 537 LGTFAANAPYNIQRFKGLGEMMPLQLWDTTLDPSKRMLKKLTLEDAVEASFTFSRLMGDK 596
Query: 601 VDTRKELIQNAANLVNLDHLDI 622
V+ RKELI +A +LD+
Sbjct: 597 VEPRKELILKSAAQFKQQNLDV 618
>gi|254424108|ref|ZP_05037826.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
gi|196191597|gb|EDX86561.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
Length = 645
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/626 (61%), Positives = 487/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DNAVDEA AG+ ++I AL AD SV+V D+GRGIP D+HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTHITAALNADGSVTVTDDGRGIPTDIHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S GY VSGGLHGVG+SVVNALSE +EVTVWR+G + Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGDS-GYKVSGGLHGVGVSVVNALSEWVEVTVWREGKVHTQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G P+ L + GT++ F PD +FT ++FD++TIA R+RELA+LN
Sbjct: 144 RFEQGNPIGKLKTS----KGSTKTGTQVTFKPDATIFTHTVEFDYDTIARRLRELAYLNA 199
Query: 181 KLTIALRKEDSD---PEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I D +K Q + YF+ GG+ EYV+++N +K+PLH DV+ D +G+ +
Sbjct: 200 GVDITFTDYRLDLIKADKPQVSHYFYEGGIREYVEYINNEKEPLHPDVIYVNSDKNGVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ ALQWC DA+SD ++G+AN+IRT+DGGTH+EG+K LTRT+N + +K K KD + +++
Sbjct: 260 EAALQWCGDAFSDNLMGFANNIRTVDGGTHLEGLKTVLTRTMNVIARKRKKRKDTESNMA 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL+ +P V D+I
Sbjct: 320 GENIREGLTAVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALTEYLDFNPSVADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A AA AAK+ARDLVR+KSVL SS+LPGKL+DCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LEKAIQAFNAAEAAKKARDLVRRKSVLESSTLPGKLSDCSSRDPGESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLG+KGEDF + LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGIKGEDFAPDTLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I ++TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERGK YCY + E
Sbjct: 500 RICLMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGKNHTYCYSEKE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+ + P+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ L
Sbjct: 560 LQDGIDAMPTNAKYNIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAEADRIFTVL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R++ I+ +N+ LDI
Sbjct: 620 MGDRVAPRRDFIETYGPRLNMADLDI 645
>gi|170077957|ref|YP_001734595.1| DNA gyrase subunit B [Synechococcus sp. PCC 7002]
gi|169885626|gb|ACA99339.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7002]
Length = 640
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/623 (61%), Positives = 488/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AGY + I V + AD SV+V DNGRGIP+D+HP+
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSVDEALAGYCTEINVEINADGSVTVTDNGRGIPVDVHPS 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTVWRD Y Q
Sbjct: 85 TGKSALETVMTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVWRDETTYKQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P LT P + GT + F PD ++FT FD+NT+AGR+RELA+LN
Sbjct: 143 RYERGVPQGELTEAPAP---QHLSGTSVCFLPDAKIFTETTVFDYNTLAGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I D EK N YF+ GG++EYV ++N +K PLH+ ++ + +G+ +++A
Sbjct: 200 GVRIVF--TDHRSEKQASNTYFYEGGIKEYVAYMNREKSPLHEEIIYVTGEKNGVQLEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC+DAYSD +LG+AN+IRT+DGGTH+EG+K+ LTRT+N++ +K +KD D +L+GE+
Sbjct: 258 LQWCTDAYSDNLLGFANNIRTVDGGTHLEGLKSVLTRTMNTVARKRNKLKDNDSNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEY E + +V+D+IL K
Sbjct: 318 IREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIVDSFVGEVLTEYFEFNLNVVDAILEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS P ++EI++VEGDSAGGSAKQ
Sbjct: 378 AIQAFKAAEAARRARELVRRKSVLESSLLPGKLADCSERDPAKTEIYLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRYH+++
Sbjct: 438 GRDRAFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFNPEKLRYHRVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERGK YCY D EL+
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYQRELVDQGYIYIACPPLYKLERGKNHAYCYSDRELQD 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
S P NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG
Sbjct: 558 QISQLPDNAKYNIQRFKGLGEMMPQQLWDTTMNPESRTLKRVEIEDAAEADRIFTVLMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ A +N+D LDI
Sbjct: 618 RVAPRREFIEMNAPKLNMDDLDI 640
>gi|390438149|ref|ZP_10226642.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
gi|389838422|emb|CCI30766.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
Length = 640
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/623 (62%), Positives = 489/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q
Sbjct: 85 TGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN
Sbjct: 143 RYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D PE+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A
Sbjct: 200 GVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 258 FQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 318 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQ
Sbjct: 378 AVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++
Sbjct: 498 LMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG
Sbjct: 558 KIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + +NL LDI
Sbjct: 618 RVAPRREFIETHGSRLNLTDLDI 640
>gi|166367564|ref|YP_001659837.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|422301910|ref|ZP_16389275.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|425463513|ref|ZP_18842843.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
gi|166089937|dbj|BAG04645.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|389788978|emb|CCI15027.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|389831668|emb|CCI25386.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
Length = 640
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/623 (62%), Positives = 488/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q
Sbjct: 85 TGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN
Sbjct: 143 RYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D PE+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A
Sbjct: 200 GVKITF--SDYRPEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 258 FQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 318 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS PE SEI+IVEGDSAGGSAKQ
Sbjct: 378 AVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPERSEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++
Sbjct: 498 LMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG
Sbjct: 558 KIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + +NL LDI
Sbjct: 618 RVAPRREFIETHGSRLNLTDLDI 640
>gi|22298189|ref|NP_681436.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
gi|22294368|dbj|BAC08198.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
Length = 640
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/623 (61%), Positives = 492/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DN+VDEA AGY S I V + AD SV+V D+GRGIP D+HP
Sbjct: 25 MYIGSTGPKGLHHLVYEVVDNSVDEALAGYCSTILVQINADGSVTVTDDGRGIPTDIHPD 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ETV+TVLHAGGKFG GY VSGGLHGVG+SVVNALSE LEVTVWR+G +HQ
Sbjct: 85 TGVSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWLEVTVWRNGFVHHQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P T L P D+++R+GT + F+PD+Q+FT I+FD + R+RELA+LN
Sbjct: 143 RYERGVPTTPL--EKTP-DTEERRGTSVTFFPDRQIFTETIEFDAKVLMTRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I + P ++ Y + GG+ EYV+++ +K+PLH +++ + + D + ++ A
Sbjct: 200 GIRIEFKDLRVTPPLSE--TYCYEGGIREYVRYMVQEKEPLHPEIIYIQGEKDDVQVEAA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC+DAYS+ +LG+AN+IRTIDGGTH+EG+KA LTRTLN+LG+K +K+ + +L+GE+
Sbjct: 258 LQWCADAYSENLLGFANNIRTIDGGTHMEGLKAVLTRTLNALGRKRNKLKENNANLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV+VPNPEFEGQTKT+LGN EVR +VD V LTEYL+ HP+V D+IL K
Sbjct: 318 IREGLTAIISVKVPNPEFEGQTKTKLGNTEVRGIVDAIVGAALTEYLDFHPNVTDTILEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A AA AA+RAR++VR+KSVL SS+LPGKLADCSS P SEIFIVEGDSAGGSAKQ
Sbjct: 378 AIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADCSSRDPAVSEIFIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKGE+F LRYHKII
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDPAKLRYHKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFFYRYQ+ L ++G +Y+ PPLYKVERG+Q YCY D EL++
Sbjct: 498 LMTDADVDGSHIRTLLLTFFYRYQQELVNQGFVYIACPPLYKVERGRQHFYCYSDRELQQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+SFP NA Y+IQRFKGLGEMMP QLWETT+NPE R+LK++ IEDAAEA+ +F+ LMG
Sbjct: 558 QIASFPENANYTIQRFKGLGEMMPEQLWETTMNPETRILKRVEIEDAAEADRIFTILMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + L++LDI
Sbjct: 618 RVAPRREFIETYGPQLALENLDI 640
>gi|159028965|emb|CAO87426.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 640
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/623 (62%), Positives = 487/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q
Sbjct: 85 TGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN
Sbjct: 143 RYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D E+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A
Sbjct: 200 GVKITF--SDYRAEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 258 FQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 318 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQ
Sbjct: 378 AVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++
Sbjct: 498 LMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG
Sbjct: 558 KIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ +NL LDI
Sbjct: 618 RVAPRREFIETHGPRLNLTDLDI 640
>gi|443654055|ref|ZP_21131209.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
gi|443333902|gb|ELS48439.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
Length = 616
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/623 (62%), Positives = 487/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SVSV D+GRGIP D+HP
Sbjct: 1 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDIKADGSVSVTDDGRGIPTDVHPT 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q
Sbjct: 61 TGKSALETVLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQ 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN
Sbjct: 119 RYERGIPVTEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNA 175
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D E+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A
Sbjct: 176 GVKITF--SDYRAEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVA 233
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
QWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 234 FQWCIDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 293
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 294 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEK 353
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQ
Sbjct: 354 AVQAYKAAEAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQ 413
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+
Sbjct: 414 GRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIV 473
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++
Sbjct: 474 LMTDADVDGAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQ 533
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG
Sbjct: 534 KIAEFPSNANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGD 593
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ +NL LDI
Sbjct: 594 RVAPRREFIETHGPRLNLTDLDI 616
>gi|33241245|ref|NP_876187.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238775|gb|AAQ00840.1| DNA gyrase B subunit [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 658
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/627 (60%), Positives = 484/627 (77%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DNAVDEA AG+ + I V L +D S S++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNAVDEALAGHCNEIVVVLCSDGSASISDNGRGIPTDVHPK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G ++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGHIHNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ L PV K GT++ F PD +FTT I FD++ ++ R+RELA+LN
Sbjct: 152 RFERGAPIGNLRSTKQPVSEKKLTGTKVNFKPDTDIFTTGIVFDYSILSSRLRELAYLNG 211
Query: 181 KLTIALRKED---SDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E SD E+ Y E YF+ GG++EYV ++N++K LH +++ + +G+
Sbjct: 212 GVKIVFRDERQSVSDKEEKAYEEVYFYEGGIKEYVAYMNSEKDALHPEIIYVNSEKEGVQ 271
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLNS +K KD D +L
Sbjct: 272 VEAALQWCIDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFARKRGKRKDGDSNL 331
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L +YLE +P V+D
Sbjct: 332 AGENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLAQYLEFNPSVIDL 391
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL S++LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 392 ILEKAIQAFNAAEAARRARELVRRKSVLESTTLPGKLADCSSRDPSESEIYIVEGDSAGG 451
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI LGLG+KGEDF + LRY
Sbjct: 452 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITGLGLGIKGEDFSLKNLRY 511
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G +Y+ PPLYKVERGK YCY++
Sbjct: 512 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYVYIACPPLYKVERGKNHTYCYNEG 571
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K +SF A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+
Sbjct: 572 DLQKTITSFGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEIEDALEADRIFTI 631
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 632 LMGDKVAPRREFIETHSVELDMASLDI 658
>gi|317968499|ref|ZP_07969889.1| DNA gyrase subunit B [Synechococcus sp. CB0205]
Length = 653
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/627 (61%), Positives = 482/627 (76%), Gaps = 9/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I VA+ D S SV+DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNEIRVAIEEDGSCSVSDNGRGIPTDVHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EV V+R G E+ Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVVVYRQGKEHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ TL + P R GT +RF PD ++FT I+FD+NT++ R+RELA+LN
Sbjct: 149 RFERGAPIGTLA--IEPAADASRTGTTVRFKPDLEIFTVGIEFDYNTLSARLRELAYLNG 206
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E + E + E Y + GG++EYV ++N +K LH D++ + DG+
Sbjct: 207 GVKIVFRDERPAARNAEGEAHEEIYHYEGGIKEYVAYMNAEKDALHPDIIYVNSEKDGVQ 266
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
I+ ALQWC DAYSD + G+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 267 IEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKESDSNL 326
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V+D
Sbjct: 327 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALGEYLEFNPSVIDL 386
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 387 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGG 446
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F + LRY
Sbjct: 447 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDDKNLRY 506
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTLLLTFFYRYQK+L + G IY+ PPLYKVERGK YCY++A
Sbjct: 507 HRIVIMTDADVDGAHIRTLLLTFFYRYQKSLVEGGYIYIACPPLYKVERGKNHTYCYNEA 566
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK F A ++IQRFKGLGEMMP QLWETT++P RM+K++ I DAAEA+ +F+
Sbjct: 567 DLKTTIEGFGEKANFTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEIADAAEADRIFTI 626
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + ++L LDI
Sbjct: 627 LMGDKVAPRREFIETHSAELDLAQLDI 653
>gi|443312981|ref|ZP_21042595.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
gi|442777131|gb|ELR87410.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
Length = 646
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/627 (59%), Positives = 486/627 (77%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGP+GLHHLVYE++DN++DEA AG+ ++IE AL D SV++ D+GRGIP D+HP
Sbjct: 25 MYIGTTGPKGLHHLVYEVVDNSIDEALAGHCTHIEAALNTDGSVTITDDGRGIPTDVHPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALETV+TVLHAGGKFG GY VSGGLHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGRSALETVMTVLHAGGKFG--DGGYKVSGGLHGVGISVVNALSEFVEVTVWRDKRVFTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ L D + R GT I F PD ++FT I+FD+ T+A R+RELA+LN
Sbjct: 143 RFERGIPIGDLQSKP---DKETRTGTSITFKPDSEIFTVGIEFDYITLASRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E +++ Y +AGG++EY+ ++N DK+PLH+ ++ + + + + +
Sbjct: 200 GVKITFTDHRLELLKSNESKTETYEYAGGIKEYISYINRDKQPLHEEIIYVQGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+D+Y+D +LG+AN+IRT +GGTH++G+KA LTRT+N++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDSYTDNVLGFANNIRTAEGGTHLDGLKAVLTRTMNAIARKRNKIKENEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VPNPEFEGQTKT+LGN EVR +VD V E LTEYLE P V D I
Sbjct: 320 GEHVREGLTAVISVKVPNPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPPVADQI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEI+IVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPSESEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDPSKLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTL+LTFFYRYQ++L ++G IY+ PPLYKVERG+ YCY + E
Sbjct: 500 RIVIMTDADVDGAHIRTLILTFFYRYQRSLVEQGYIYIACPPLYKVERGRNHYYCYSERE 559
Query: 537 LKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L + ++ FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+
Sbjct: 560 LNNLTQNEFPANANYTIQRFKGLGEMMPTQLWDTTMNPESRTLKRIEIEDAAEADRIFTV 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +N LDI
Sbjct: 620 LMGDRVAPRREFIETYGPRLNFAELDI 646
>gi|428217864|ref|YP_007102329.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
gi|427989646|gb|AFY69901.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
Length = 646
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/623 (60%), Positives = 478/623 (76%), Gaps = 7/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DN+VDEA GY I V LLAD SV+V DNGRGIP D+HP
Sbjct: 30 MYIGSTGPKGLHHLVYEVVDNSVDEALGGYCDTILVELLADGSVAVTDNGRGIPTDVHPR 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKF G+S Y VSGGLHGVG+SVVNALSE +EV+VWR G + Q
Sbjct: 90 TGKSALETVMTVLHAGGKFDGNS--YKVSGGLHGVGVSVVNALSEWVEVSVWRQGKLHQQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+ L V K ++GT++ F PD +F T I+F+ + + GR+RELA+LN
Sbjct: 148 RYERGIPIGNL--EVSTAKDKQKRGTKVCFMPDTMIFATGIEFEFDILVGRLRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I + D E ++ Y + GG+ EYV ++ DK+ LH +++ + + + I I++A
Sbjct: 206 GLKIEI--ADRRGETDKVETYQYDGGIREYVSYMTRDKEALHPEIIYIKGERNDIQIEVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+QWC D+YSD + G+AN+IRT+DGGTH+EG+K LTRT+NS +K K +KD D +L+GE+
Sbjct: 264 MQWCIDSYSDNVFGFANNIRTVDGGTHLEGLKTVLTRTINSTARKLKKLKDSDSNLAGEN 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR VD V E L E++E +P V +I+ K
Sbjct: 324 VREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGTVDSFVGEVLNEFIEFNPQVASTIIEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESE+FIVEGDSAGGSAKQ
Sbjct: 384 ALQSYNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESELFIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LN+ER D+ +YKN EIQ LI ++G+G++GE+F LRYHKII
Sbjct: 444 GRDRHFQAILPLRGKVLNIERADDNKIYKNAEIQALITSIGMGIRGEEFDFSQLRYHKII 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+L DADVDGAHIRTLLLTFFYRYQ+ L ++G IY+G PPLYKVERG+ QYCY D EL++
Sbjct: 504 LLADADVDGAHIRTLLLTFFYRYQRELVEQGNIYIGCPPLYKVERGRSHQYCYSDRELQQ 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ SSFP NA Y+IQRFKGLGEMMP+QLWETT+NPE R LKQ+ IEDAAEA +F+ LMG
Sbjct: 564 ILSSFPENANYTIQRFKGLGEMMPLQLWETTMNPETRTLKQITIEDAAEAERIFTILMGD 623
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
+V R+E I+ +N+ LDI
Sbjct: 624 KVAPRREFIETYGPKLNITDLDI 646
>gi|194476918|ref|YP_002049097.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
gi|171191925|gb|ACB42887.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
Length = 652
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/627 (61%), Positives = 485/627 (77%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V+L D S +++DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDEILVSLSEDGSATISDNGRGIPTDIHPH 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S Y VSGGLHGVG+SVVNALSE LEVTV+R +HQ
Sbjct: 91 TGKSALETVLTVLHAGGKFGGDS--YKVSGGLHGVGVSVVNALSEWLEVTVYRKSQLHHQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ LT ++R GT + F PD ++FTT+I FD++T+AGR+RELA+LN
Sbjct: 149 RFERGVPIGLLTAQP---GEENRTGTSLTFKPDTKIFTTSITFDYSTLAGRLRELAYLNG 205
Query: 181 KLTIALRKE--DSDPEKN-QYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I+ R E S E Y E Y + GG++EYV ++N +K PLH +++ DG+
Sbjct: 206 GVRISFRDERISSGGENGIAYEEVYCYKGGIKEYVAYINKEKDPLHSEIIYVNSHKDGVQ 265
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC D YSD++LG+AN+IRT+DGGTHIEG+K LTRTLNS KK KD D +L
Sbjct: 266 VEAALQWCVDTYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFAKKRGKRKDSDNNL 325
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E LT+YLE +P V++
Sbjct: 326 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALTQYLEFNPSVIEL 385
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KS+L SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 386 ILEKAIQAFNAAEAARRARELVRRKSILESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 445
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F +++LRY
Sbjct: 446 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDEKSLRY 505
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTLLLTFFYRYQK+L + G IY+ PPLYKVERGK YCYD+
Sbjct: 506 HRIVIMTDADVDGAHIRTLLLTFFYRYQKSLLEGGYIYIACPPLYKVERGKNHTYCYDEN 565
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L F + YSIQRFKGLGEMMP QLW TT++P+ RM+K++ IEDA EA+ +F+
Sbjct: 566 DLSTTLKRFREKSNYSIQRFKGLGEMMPKQLWSTTMDPQSRMMKRVEIEDALEADRIFTI 625
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +NL LDI
Sbjct: 626 LMGDKVAPRREFIETHSADLNLAELDI 652
>gi|158337618|ref|YP_001518793.1| DNA gyrase subunit B [Acaryochloris marina MBIC11017]
gi|158307859|gb|ABW29476.1| DNA gyrase, B subunit [Acaryochloris marina MBIC11017]
Length = 646
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/627 (61%), Positives = 480/627 (76%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +I + L D SV V D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCKHIHIYLNEDGSVRVTDDGRGIPTDKHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKF G S Y VSGGLHGVG+SVVNALSE +E VWR+G + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFDGDS--YKVSGGLHGVGISVVNALSEWVEAKVWRNGKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P + L V P D K+ GT I F PD +FT +FD+ T+A R+RELA+LN
Sbjct: 143 RFERGIPKSELV--VEPTDRKE-SGTAITFLPDDTIFTVTTEFDYKTLASRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I+ R E + ++ + Y + GG++EYV ++N DK+P+H+ + + + + +
Sbjct: 200 GVEISFHDNRLELLEADEPKVETYRYDGGIKEYVDYMNRDKEPIHEECIYVEGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+NSL +K +KD D +L
Sbjct: 260 EVALQWCRDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNSLARKRSKLKDGDSNLG 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEH+REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP+V DS+
Sbjct: 320 GEHIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPNVADSV 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P SEI+IVEGDSAGGS
Sbjct: 380 IEKALQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSTSEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRGFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDVSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+II++TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+ YCY D E
Sbjct: 500 RIILMTDADVDGAHIRTLLLTFFYRYQRELIDQGYIYIACPPLYKIERGRSHYYCYSDRE 559
Query: 537 LKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ V+ FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LKQ+ IEDAAEA+ +F+
Sbjct: 560 LQNLVQHEFPANANYTIQRFKGLGEMMPTQLWDTTMNPETRTLKQIDIEDAAEADRIFTI 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +NL LDI
Sbjct: 620 LMGDRVAPRREFIETHGPRLNLAELDI 646
>gi|148241191|ref|YP_001226348.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
gi|147849501|emb|CAK26995.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
Length = 657
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/627 (61%), Positives = 481/627 (76%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V L AD S SVADNGRGIP D+HP
Sbjct: 36 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCNTIDVCLRADGSCSVADNGRGIPTDVHPR 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q
Sbjct: 96 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVHRQDKVHRQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ +L K R GT + F PD ++FT I FD+ T++GR+RELA+LN
Sbjct: 154 RFERGAPIGSLASEA---GEKGRTGTSVCFKPDIEIFTGGISFDYATLSGRLRELAYLNG 210
Query: 181 KLTIALRKE--DSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E ++ E Q +E YF+ GG+ EYV ++N +K PLH D++ + DG+
Sbjct: 211 GVKIVFRDERPEAAGEDGQPHEEIYFYEGGIREYVNYMNAEKDPLHPDIIYVNSEKDGVQ 270
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K KD D +L
Sbjct: 271 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKDSDGNL 330
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE HP V+D
Sbjct: 331 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDTVVGEALSEYLEFHPQVIDL 390
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 391 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 450
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRY
Sbjct: 451 SAKQGRDRRNQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDVSNLRY 510
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTL+LTFFYRYQ+ L + G IY+ PPLYKVERGK YCY++
Sbjct: 511 HRIVIMTDADVDGAHIRTLILTFFYRYQRELVEGGYIYIACPPLYKVERGKNHTYCYNEQ 570
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LKK F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDAA+A+ +F+
Sbjct: 571 DLKKTLDGFGEKANYTIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDAAQADRIFTI 630
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +NL LDI
Sbjct: 631 LMGDKVAPRREFIETHSAELNLADLDI 657
>gi|359459125|ref|ZP_09247688.1| DNA gyrase subunit B [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/627 (61%), Positives = 479/627 (76%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +I + L D SV V D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCKHIHIYLNEDGSVRVTDDGRGIPTDKHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKF G S Y VSGGLHGVG+SVVNALSE +E VWR+G + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFDGDS--YKVSGGLHGVGISVVNALSEWVEAKVWRNGKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P + L P D K+ GT I F PD +FT +FD+ T+A R+RELA+LN
Sbjct: 143 RFERGIPKSELIAE--PTDRKE-SGTAITFLPDNTIFTVTTEFDYKTLASRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I+ R E + ++ + Y + GG++EYV ++N DK+P+H+ + + + + +
Sbjct: 200 GVEISFHDNRLELLEADEPKVETYRYDGGIKEYVDYMNRDKEPIHEECIYVEGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+NSL +K +KD D +L
Sbjct: 260 EVALQWCRDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNSLARKRSKLKDGDSNLG 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEH+REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP+V DS+
Sbjct: 320 GEHIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPNVADSV 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P SEI+IVEGDSAGGS
Sbjct: 380 IEKALQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSTSEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRGFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDVSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+II++TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+ YCY D E
Sbjct: 500 RIILMTDADVDGAHIRTLLLTFFYRYQRELIDQGYIYIACPPLYKIERGRSHYYCYSDRE 559
Query: 537 LKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ V+ FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LKQ+ IEDAAEA+ +F+
Sbjct: 560 LQNLVQHEFPANANYTIQRFKGLGEMMPTQLWDTTMNPETRTLKQIDIEDAAEADRIFTI 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +NL LDI
Sbjct: 620 LMGDRVAPRREFIETHGPRLNLAELDI 646
>gi|148238483|ref|YP_001223870.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
gi|147847022|emb|CAK22573.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
Length = 655
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/627 (60%), Positives = 479/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ S I+V L D S SV DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCSEIQVVLGEDGSASVTDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ +L P + R GT + F PD ++F+ I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAPIGSLASEPQPAEEDGRTGTSVCFKPDIEIFSVGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E N + E YF+ GG++EYV ++N +K LH +++ + DG++
Sbjct: 209 GVRIVFRDERESARDAEGNPHEETYFYEGGIKEYVAYMNAEKDALHPEIIYVNAEKDGVS 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K K+ D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L +YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEALGQYLEFNPGVIDM 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L D G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVDGGYIYIACPPLYKVERGKNHTYCYNEP 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+
Sbjct: 569 ELQKTLEGFGEKANYNIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMTALDI 655
>gi|427723858|ref|YP_007071135.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
gi|427355578|gb|AFY38301.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
Length = 640
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/623 (60%), Positives = 481/623 (77%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AGY I V +L D SV V DNGRGIP D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSVDEALAGYCDEINVEILEDGSVRVTDNGRGIPTDIHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFG GY VSGGLHGVG+SVVNALSE +EVTVWR+ E+ Q
Sbjct: 85 TGKSALETVMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWVEVTVWRNETEHKQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L V + + GT + F PD ++FT FD+NT+AGR+RELA+LN
Sbjct: 143 RYERGIAKGDL---VTAPATGHKSGTSVHFLPDAEIFTETTVFDYNTLAGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I D E+ + N YF+ GG++EYV ++N +K LH+ ++ + + + +++A
Sbjct: 200 SVKIIF--TDHRAEEPRSNTYFYEGGIKEYVAYMNREKTALHEEIIYVSGEKNNVQVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N++ +K +KD + +L+GE+
Sbjct: 258 LQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKAVLTRTMNTVARKRNKIKDNESNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD + E L EY E + +V+DSIL K
Sbjct: 318 IREGLTAVISVKVPEPEFEGQTKTKLGNSEVRGIVDSFMGEVLNEYFEFNLNVVDSILEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS +SEI++VEGDSAGGSAKQ
Sbjct: 378 AIQAFKAAEAARRARELVRRKSVLESSLLPGKLADCSERDAAKSEIYLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRYH+++
Sbjct: 438 GRDRQFQAILPLRGKILNIEKTDDARIYKNNEIQSLITALGLGIKGEEFNPEKLRYHRVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ++L D+G IY+ PPLYK+ERGK+ YCY D EL+
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYIYIACPPLYKLERGKKHTYCYSDRELQS 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG
Sbjct: 558 EIAELPTNAKYNIQRFKGLGEMMPQQLWDTTMNPESRTLKRVEIEDAAEADRIFTVLMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ A +N+ LDI
Sbjct: 618 RVAPRREFIETNAPKLNMLDLDI 640
>gi|88809918|ref|ZP_01125423.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
gi|88786108|gb|EAR17270.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
Length = 655
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/627 (60%), Positives = 482/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ + I+V L D S + DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTEIQVVLGEDGSACITDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVDVTVRRQAQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ +L P + + R GT +RF PD ++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAPIGSLVSEPQPAEEEGRTGTSVRFKPDIEIFTVGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E N + E YF+ GG++EYV ++N +K LH +++ + DG++
Sbjct: 209 GVRIVFRDERENARDAEGNPHEEIYFYEGGIKEYVAYMNAEKDALHPEIIYVNAEKDGVS 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKESDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPGVIDM 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY+++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNES 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+
Sbjct: 569 ELQKTLEGFGEKANYNIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMAALDI 655
>gi|116074377|ref|ZP_01471639.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
gi|116069682|gb|EAU75434.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
Length = 655
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/627 (60%), Positives = 480/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ S I+V L D S SV DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCSEIQVVLAEDGSASVTDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGKVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L P + GT + F PD Q+FT I FD+ T+A R+RELA+LN
Sbjct: 149 RFERGAAIGSLRSEEQPAEENGLTGTSVCFKPDIQIFTGGIVFDYATLAARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E PE + E YF+ GG++EYV ++N +K LH D++ + DG+
Sbjct: 209 GVRIVFRDEREAARTPEGEPHEEIYFYEGGIKEYVAYMNKEKDALHPDIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVIGL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEQ 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K ++FP A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+
Sbjct: 569 DLQKTLAAFPEKANYNIQRFKGLGEMMPAQLWETTMDPTTRTMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ +LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMTNLDI 655
>gi|427703473|ref|YP_007046695.1| DNA gyrase subunit B [Cyanobium gracile PCC 6307]
gi|427346641|gb|AFY29354.1| DNA gyrase, B subunit [Cyanobium gracile PCC 6307]
Length = 652
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/627 (61%), Positives = 478/627 (76%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V L D S SV DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILVTLHGDGSASVTDNGRGIPTDIHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGRSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVHRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ TL P GT +RF PD ++F+ I+FD++T++ R+RELA+LN
Sbjct: 149 RFERGLPIGTLASEDAP---DAHTGTSVRFRPDIEIFSGGIEFDYHTLSARLRELAYLNG 205
Query: 181 KLTIALRKEDSDPEKNQYNE----YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E + Y + GG++EYV ++N +K PLH +++ DG+
Sbjct: 206 GVRIVFRDERAAAAGADGAAHEEIYHYEGGIKEYVAYMNAEKDPLHPEIIYVNATKDGVQ 265
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L
Sbjct: 266 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKDADANL 325
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD +V E L EYLE +P V+D
Sbjct: 326 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDTTVGEALGEYLEFNPQVIDL 385
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 386 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 445
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF+++ LRY
Sbjct: 446 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFEEKNLRY 505
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 506 HRIVIMTDADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHNYCYNEN 565
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
ELKKV F A Y+IQRFKGLGEMMP QLWETT++PE RM+K++ IEDA EA+ +F+
Sbjct: 566 ELKKVLEGFGEKANYNIQRFKGLGEMMPKQLWETTMDPETRMMKRVEIEDALEADRIFTI 625
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + ++ LDI
Sbjct: 626 LMGDKVAPRREFIETHSAELDFAQLDI 652
>gi|87123248|ref|ZP_01079099.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
gi|86168968|gb|EAQ70224.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
Length = 705
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/617 (61%), Positives = 477/617 (77%), Gaps = 7/617 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ S IEV L D S SV DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCSEIEVVLGDDGSASVTDNGRGIPTDIHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ +L PV+ K R GT + F PD ++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAPIGSLASAPQPVEEKGRTGTSVCFKPDLEIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E + E + + E YF+ GG++EYV ++N +K PLH +++ + DG+
Sbjct: 209 GVRIVFRDERESALNAEGDAHEEVYFYEGGIKEYVAYMNAEKDPLHPEIIYVNAEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKESDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPSVIDM 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDARIYKNTEIQALITALGLGIKGEDFDAKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGFIYIACPPLYKVERGKNHTYCYNEQ 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+ + F A Y+IQRFKGLGEMMP QLWETT++P R++K++ IEDA EA+ +F+
Sbjct: 569 DLQTTLAGFGEKANYNIQRFKGLGEMMPKQLWETTMDPTTRLMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAA 612
LMG +V R+E I+ A
Sbjct: 629 LMGDKVAPRREFIETTA 645
>gi|427705874|ref|YP_007048251.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
gi|427358379|gb|AFY41101.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
Length = 645
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/626 (61%), Positives = 482/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IE+ + AD SV+V D+GRGIP D H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEIDINADGSVTVTDDGRGIPTDTHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R GT + F PD Q+FTT I+FD T+AGR+RELA+LN
Sbjct: 143 RYERGVPVTELVAKPY---KEARTGTSVTFKPDTQIFTTGIEFDFITLAGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + I
Sbjct: 200 GVKITFTDNRLELLKSDTPKIETYEYRGGIKEYIAYMNRDKQPLHEEIIYVQGERSNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI+IVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYKVERGK +YCY D E
Sbjct: 500 RIIIMTDADVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLYKVERGKNHEYCYSDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + FP+NA Y+IQRFKGLGEMMP QLW TT+NPE R LKQ+ IEDAAEA+ +F+ L
Sbjct: 560 LQQAIAKFPANANYTIQRFKGLGEMMPAQLWTTTMNPETRTLKQVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +N LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNFAELDI 645
>gi|113954544|ref|YP_729329.1| DNA gyrase subunit B [Synechococcus sp. CC9311]
gi|113881895|gb|ABI46853.1| DNA gyrase, B subunit [Synechococcus sp. CC9311]
Length = 655
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/627 (60%), Positives = 481/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DNAVDEA AG+ + I V L D S V+DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNAVDEALAGHCNEITVVLGEDGSAFVSDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L P + K GT + F PD Q+FT I+FD++T++ R+RELA+LN
Sbjct: 149 RFERGAAIGSLASEPQPAEEKGLTGTSVCFKPDHQIFTVGIEFDYSTLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E E YF+ GG++EYV ++N +K PLH +++ + DG++
Sbjct: 209 GVRIVFRDERQAARDQEGKPREELYFYEGGIKEYVAYMNAEKDPLHPEIIYVNSEKDGVS 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKEADSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGESLSQYLEFNPGVIDM 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEQ 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K + F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+
Sbjct: 569 QLQKTLAGFGEKANYNIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEVQDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSADLDMASLDI 655
>gi|159904302|ref|YP_001551646.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9211]
gi|159889478|gb|ABX09692.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9211]
Length = 658
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/627 (60%), Positives = 482/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V L D S S+ DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDEIVVVLCNDGSASITDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQNQTHVQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV LT P K GT + F PD Q+FT+ I+F++ T++ R+RELA+LN
Sbjct: 152 RFERGVPVGGLTSKDQPSSQKGVTGTTVCFKPDNQIFTSGIEFEYATLSSRLRELAYLNG 211
Query: 181 KLTIALRKEDSDP---EKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E E + Y E YF+ GG++EYV ++N++K LH +++ + DG+
Sbjct: 212 GVRIVFRDERKTSLTTEGDPYEEIYFYQGGIKEYVSYINSEKDALHPEIIYVNSEKDGVQ 271
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLNS +K KD D +L
Sbjct: 272 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFARKRGKRKDGDNNL 331
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 332 AGENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPSVIDL 391
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 392 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 451
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR+FQAILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLG+KGE+F + LRY
Sbjct: 452 SAKQGRDRKFQAILPLRGKILNIEKTDDSKIYKNTEIQSLITALGLGIKGEEFSSKNLRY 511
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK+ +YCY+++
Sbjct: 512 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKKHKYCYNES 571
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LKK F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+
Sbjct: 572 DLKKTIDGFGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKKVEIEDALEADRIFTI 631
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R++ I+ + ++L LDI
Sbjct: 632 LMGDKVAPRRQFIETHSVELDLASLDI 658
>gi|424513000|emb|CCO66584.1| DNA gyrase subunit B [Bathycoccus prasinos]
Length = 811
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/623 (60%), Positives = 471/623 (75%), Gaps = 7/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EILDN VDE QA +ASN+++ L V V DNGRGIP+++HP
Sbjct: 190 MYIGNTSTKGLHHLVWEILDNGVDEIQANHASNVQLTLEKTGHVVVTDNGRGIPVEIHPK 249
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLT+LHAGGKFGG+ SGYSVSGGLHGVG+SVVNALSE LEVTVWR EY Q
Sbjct: 250 TGKSSLETVLTILHAGGKFGGAESGYSVSGGLHGVGVSVVNALSEELEVTVWRGDKEYFQ 309
Query: 121 KYSRGKPVTTLTCHVLPVDSKD---RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+SRGK TT V +KD + GTR+RF PD +F +FD N I R++ELAF
Sbjct: 310 TFSRGK--TTSELQVSERKAKDGNPKTGTRVRFKPDNMIFQKVQEFDPNIIRARMKELAF 367
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
LN + DS ++ + + + GL +Y+ LN+DK +H+ + + + +G+ ++
Sbjct: 368 LNSNAELRFTSVDSKTKEMKEDVLKYPNGLTDYIVDLNSDKNAIHEPITLKTEHEGVKVE 427
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
L LQW D YSDT+LGYANSIRTIDGG+HI+G+K SLTR N+ +K+K +K +D +L G
Sbjct: 428 LCLQWTHDDYSDTILGYANSIRTIDGGSHIDGLKFSLTRAFNTAARKAKLLKAEDTNLGG 487
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+H+REGL+ +I+V VP PEFEGQTKTRLGN E RK V+ + E TEYLE HP+VL S+
Sbjct: 488 DHIREGLSAVIAVWVPQPEFEGQTKTRLGNSEARKAVEAMISEKFTEYLEFHPEVLSSVF 547
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+ +ALKA+ AAKRARDLVR+KSVLRSSSLPGKL+DC+++ +E+EIF+VEGDSAGGS
Sbjct: 548 KKAQAALKASEAAKRARDLVRRKSVLRSSSLPGKLSDCANSNADETEIFLVEGDSAGGSC 607
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQA+LPLRGKILNVERKDE AMYKN EIQ+++ ALGLGV GEDF LRY K
Sbjct: 608 KQGRDRAFQAVLPLRGKILNVERKDEQAMYKNTEIQSMVTALGLGVMGEDFNVNNLRYSK 667
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAE 536
IIILTDADVDGAHIRTLLLTF YRYQK LF++G IYV VPPLYKVE GK+ V+YCYD+ E
Sbjct: 668 IIILTDADVDGAHIRTLLLTFLYRYQKALFEQGHIYVAVPPLYKVESGKKNVKYCYDELE 727
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
LKK + N ++QRFKGLGEMMP QLW+TTL+P+ R L++L ++DAA N FS L
Sbjct: 728 LKKHLDTLGDNQPKNLQRFKGLGEMMPQQLWDTTLDPKTRTLRRLTVDDAAMVNHTFSLL 787
Query: 597 MGARVDTRKELIQN-AANLVNLD 618
M +V R++ I++ +L+NLD
Sbjct: 788 MSDKVGPRRQFIEDEGPDLMNLD 810
>gi|427711338|ref|YP_007059962.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
gi|427375467|gb|AFY59419.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
Length = 640
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/623 (60%), Positives = 486/623 (78%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGP+GLHHLVYE++DN+VDEA AGY +++ + + D SV+V D+GRGIP D+HP
Sbjct: 25 MYIGTTGPKGLHHLVYEVVDNSVDEALAGYCNHVLIQMNHDGSVTVTDDGRGIPTDIHPD 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ETV+TVLHAGGKFG GY VSGGLHGVG+SVVNALSE LEV VWR+ + Q
Sbjct: 85 TGLSGVETVMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWLEVKVWRNNTVFTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+T L P +++R+GT + F+PD+Q+FT I+F+ + R+RELA+LN
Sbjct: 143 RYERGVPMTALEPS--PA-TENRRGTSVTFFPDRQIFTETIEFEAKILTNRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D+ E Q Y + GG+ EY+Q++ DK+PLH +++ + + + + +++A
Sbjct: 200 GIRIEFI--DARGEIPQSEVYCYEGGIREYIQYMIQDKEPLHPEMIYVQGEKNDVQVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWCSDAY+++++G+AN+IRT +GGTH+EG+KA LTRTLNS+ +K +K+ D +L+GE+
Sbjct: 258 LQWCSDAYNESLMGFANNIRTNEGGTHLEGLKAVLTRTLNSIARKRNKLKEGDSNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT I+SV+VPNPEFEGQTKT+LGN EVR +VD V E LTEYL+ P D+IL K
Sbjct: 318 IREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRGIVDSVVGEALTEYLDFRPQAADAILEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A AA AA+RAR++VR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQ
Sbjct: 378 AIQAFNAAEAARRAREMVRRKSVLESSTLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EI LI ALGLG+KGEDF LRYH+I+
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIHALITALGLGIKGEDFDSSQLRYHRIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+Q YCY+D +L++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGRQHYYCYNDRQLQE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+SFP NA Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDAAEA+ +F+ LMG
Sbjct: 558 RIASFPENANYTIQRFKGLGEMMPQQLWDTTMNPETRMMKRVEIEDAAEADRMFTILMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + L HLDI
Sbjct: 618 RVAPRREFIETYGPKLALAHLDI 640
>gi|427718008|ref|YP_007066002.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
gi|427350444|gb|AFY33168.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
Length = 645
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/626 (61%), Positives = 488/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AGY +++EV L AD SV+V D+GRGIP D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSVDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDKKVHLQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R GT F PD Q+F+T I+FD+ T++GR+RELA+LN
Sbjct: 143 RYERGVPVTELQAKPY---KEARTGTSTTFKPDTQIFSTGIEFDYITLSGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N +K+PLH+ ++ + + + + I
Sbjct: 200 GVKITFTDHRLELLKSDTAKVETYEYRGGIKEYIAYMNREKQPLHEEIIYVQGERNNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGVADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDSTQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+KVERG+ +YCY + E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFIYIACPPLFKVERGRNHEYCYSERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ ++FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ L
Sbjct: 560 LQQHIATFPSNANYNIQRFKGLGEMMPAQLWDTTMNPESRKMKQVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|318042881|ref|ZP_07974837.1| DNA gyrase subunit B [Synechococcus sp. CB0101]
Length = 653
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/627 (60%), Positives = 478/627 (76%), Gaps = 9/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V L D S +V DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILVVLNEDGSCAVTDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G E+ Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVHRQGQEHLQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ +L P R GT + F PD ++FT I+FD++T++ R+RELA+LN
Sbjct: 149 RFERGAPIGSLASK--PAADPSRTGTSVCFKPDIEIFTGGIEFDYHTLSARLRELAYLNG 206
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E + E + E Y + GG++EYV ++N +K LH D++ + DG+
Sbjct: 207 GVRIVFRDERPAARNAEGAAHEEIYHYEGGIKEYVAYMNAEKDALHPDIIYVNSEKDGVQ 266
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD + G+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L
Sbjct: 267 VEAALQWCVDAYSDNIFGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKDADANL 326
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+EYLE +P V+D
Sbjct: 327 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEALSEYLEFNPSVIDL 386
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 387 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGG 446
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F ++ LRY
Sbjct: 447 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDEKNLRY 506
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 507 HRIVIMTDADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHSYCYNEG 566
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK+V F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDAAEA+ +F+
Sbjct: 567 DLKRVVEGFGEKANYTIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDAAEADRIFTI 626
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + ++L LDI
Sbjct: 627 LMGDKVAPRREFIETHSAELDLAQLDI 653
>gi|56751624|ref|YP_172325.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
gi|81301300|ref|YP_401508.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|25019687|gb|AAN71773.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|56686583|dbj|BAD79805.1| DNA gyrase B subunit [Synechococcus elongatus PCC 6301]
gi|81170181|gb|ABB58521.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
Length = 645
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/626 (61%), Positives = 484/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DNAVDEA AGY + I+V LL D S V DNGRGIP D+HP
Sbjct: 25 MYIGSTGPKGLHHLVYEVVDNAVDEALAGYCNTIDVRLLEDGSCQVTDNGRGIPTDIHPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+G + Q
Sbjct: 85 TGKSALETVLTILHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G P+ L V P D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN
Sbjct: 143 RFEQGNPIGEL--QVAP-DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I E KN Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ +
Sbjct: 200 GVRIDFTDERLQLTKNHEPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ ALQWC DAYSD +LG+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LS
Sbjct: 260 EAALQWCVDAYSDNILGFANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT I+SV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D I
Sbjct: 320 GENIREGLTAIVSVKVPDPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYK+ERG+ YCY++ E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRSLLEQGYIYIACPPLYKLERGRNHYYCYNERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ ++FP NA Y+IQRFKGLGEMMP QLWETT++PE R +K++ IEDAAEA+ +F+ L
Sbjct: 560 LQERIATFPENANYTIQRFKGLGEMMPQQLWETTMDPETRTMKRVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ +++ LDI
Sbjct: 620 MGDRVQPRREFIETYGPQLSMAALDI 645
>gi|123967056|ref|YP_001012137.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9515]
gi|123201422|gb|ABM73030.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9515]
Length = 655
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/626 (59%), Positives = 477/626 (76%), Gaps = 8/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ IE+ L D S S++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQIEIVLKDDGSASISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+R+G E+ Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVFREGSEFTQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKD-RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ RG +T +K R+GT I F PD +FT I+FD+ ++ R+RELA+LN
Sbjct: 152 RFERG--ITKGELKTQKQQNKSLRKGTIICFKPDTTIFTDGIEFDYALLSSRLRELAYLN 209
Query: 180 PKLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I E + E Y + GG++EYVQ++N +K+ +H +++ D + +
Sbjct: 210 GGVKIIFIDERQKLPDGSFKEEIYLYDGGIKEYVQYINKEKESIHSEIIYVDSQKDNVYV 269
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ ALQWCSD YSD +LG+AN+IRTIDGGTHIEG+K LTRT N++ KK K+ D +LS
Sbjct: 270 EAALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNAIAKKRGKRKEVDKNLS 329
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P+V D I
Sbjct: 330 GENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGESLTKYMEFNPNVFDLI 389
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ + AA AAKRARDLVR+KSVL SS+LPGKLADCSS P SEI+IVEGDSAGGS
Sbjct: 390 LEKAIQSFNAAEAAKRARDLVRRKSVLESSTLPGKLADCSSRDPSGSEIYIVEGDSAGGS 449
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH
Sbjct: 450 AKQGRDRKFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVNSLRYH 509
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK +YCY++ +
Sbjct: 510 RVVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHKYCYNEGQ 569
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
LKK F A Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDA EA+ +F+ L
Sbjct: 570 LKKTIEDFGEKANYNIQRFKGLGEMMPKQLWDTTMNPETRMMKKVEIEDALEADRIFNIL 629
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG +V R+E I+ + +++ LDI
Sbjct: 630 MGDKVAPRREFIETHSANLDIATLDI 655
>gi|352095354|ref|ZP_08956457.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
gi|351679365|gb|EHA62507.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
Length = 655
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/627 (59%), Positives = 480/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DNAVDEA AG+ + I V L D S V+DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNAVDEALAGHCNEITVVLGEDGSAFVSDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L P + K GT + F PD ++FT I+FD++T++ R+RELA+LN
Sbjct: 149 RFERGAAIGSLVSEPQPAEEKGVTGTSVCFKPDHEIFTVGIEFDYSTLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E E YF+ GG++EYV ++N +K PLH +++ + DG++
Sbjct: 209 GVRIVFRDERQAARDSEGQPREELYFYEGGIKEYVAYMNAEKDPLHPEIIYVNSEKDGVS 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKDSDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPGVIDM 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCS+ P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSTRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEQ 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+ + F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+
Sbjct: 569 QLQTTLAGFGEKANYNIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEVQDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSADLDMASLDI 655
>gi|17232757|ref|NP_489305.1| DNA gyrase subunit B [Nostoc sp. PCC 7120]
gi|17134404|dbj|BAB76964.1| DNA gyrase B subunit [Nostoc sp. PCC 7120]
Length = 645
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/626 (61%), Positives = 486/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SV+V D+GRGIPID H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVEINADGSVAVTDDGRGIPIDTHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + + R GT + F PD Q+FT +I+FD+ T++GR+RELA+LN
Sbjct: 143 RYERGVPVTELITNPY---KEARTGTSVTFKPDTQIFTNSIEFDYITLSGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + + I
Sbjct: 200 GVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKEHEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI+IVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTL+LTFFYRYQ+ L ++G IY+ PPLYKVERG+ +YCY + E
Sbjct: 500 RIIIMTDADVDGAHIRTLILTFFYRYQRALIEQGFIYIACPPLYKVERGRNYEYCYSERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + FP+NA Y+IQRFKGLGEMMP QLW TT+NPE R LK++ IEDAAEA+ +F+ L
Sbjct: 560 LQQAIAKFPANANYTIQRFKGLGEMMPEQLWTTTMNPETRTLKRVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|87301672|ref|ZP_01084512.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
gi|87283889|gb|EAQ75843.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
Length = 652
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/630 (60%), Positives = 473/630 (75%), Gaps = 16/630 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V L D S + DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILVRLCEDGSAEITDNGRGIPTDIHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ +L P + GT +RF PD ++F+ I FD+ T++GR+RELA+LN
Sbjct: 149 RFERGTPIGSLRSEDDPSGA---TGTAVRFKPDIEIFSGGIDFDYATLSGRLRELAYLNG 205
Query: 181 KLTIALRKE-------DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD 232
+ I R E D P + Y+ + GG+ EYV ++N K PLH D++ D
Sbjct: 206 GVRIVFRDEREAAKGSDGSPHEEIYH---YEGGIREYVTYMNAGKDPLHPDIIYVNASKD 262
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
G+ ++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D
Sbjct: 263 GVQVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKDTD 322
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
+L+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L E+LE HP V
Sbjct: 323 SNLAGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSVVGEALGEFLEFHPQV 382
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+D IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDS
Sbjct: 383 IDLILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDS 442
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI LGLG+KGE+F A
Sbjct: 443 AGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITGLGLGIKGEEFNLSA 502
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQKTL + G IY+ PPLYKVERGK YCY
Sbjct: 503 LRYHRIVIMTDADVDGAHIRTLLLTFFYRYQKTLLEGGYIYIACPPLYKVERGKNHTYCY 562
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
++ +LKK F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDAAEA+ +
Sbjct: 563 NEQDLKKTLDGFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDAAEADRI 622
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F+ LMG +V R+E I+ + ++ LDI
Sbjct: 623 FTILMGDKVAPRREFIETHSAELDFAQLDI 652
>gi|254430578|ref|ZP_05044281.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
gi|197625031|gb|EDY37590.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
Length = 652
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/628 (60%), Positives = 477/628 (75%), Gaps = 12/628 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DNAVDEA AG+ I V L D S +V+DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNAVDEALAGHCDQILVVLNEDGSCAVSDNGRGIPTDIHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE ++VTV+R + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVQVTVYRHDQVHTQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L K R GT + F PD ++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAAIGSLAS---APGEKGRTGTTVCFKPDSEIFTGGISFDYATLSSRLRELAYLNG 205
Query: 181 KLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGI 234
+ I R E +N E YF+ GG++EYV ++N +K PLH D++ + +G+
Sbjct: 206 GVRIVFRDERQSA-RNAAGEPHEDIYFYEGGIKEYVAYMNAEKDPLHPDIIYVNAEKEGV 264
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +
Sbjct: 265 QVEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKDADAN 324
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L E+LE +P V+D
Sbjct: 325 LAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDTLVGEALGEFLEFNPSVID 384
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAG
Sbjct: 385 LILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAG 444
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF ++ LR
Sbjct: 445 GSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDEKNLR 504
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YH+I+I+TDADVDGAHIRTL+LTFF+RYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 505 YHRIVIMTDADVDGAHIRTLILTFFFRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNE 564
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+LKK SF A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+
Sbjct: 565 GDLKKTIESFGEKANYTIQRFKGLGEMMPQQLWETTMDPATRMMKRVEIEDALEADRIFT 624
Query: 595 SLMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + ++L LDI
Sbjct: 625 ILMGDKVAPRREFIETHSAELDLAQLDI 652
>gi|427729923|ref|YP_007076160.1| DNA gyrase subunit B [Nostoc sp. PCC 7524]
gi|427365842|gb|AFY48563.1| DNA gyrase, B subunit [Nostoc sp. PCC 7524]
Length = 645
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/626 (61%), Positives = 484/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY +++E+ L AD SV+V D+GRGIP D H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEIDLNADGSVTVTDDGRGIPTDTHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R GT + F PD Q+FTT +FD+ T+A R+RELA+LN
Sbjct: 143 RYERGVPVTELIAKPY---KEARTGTSVTFKPDVQIFTTGTEFDYLTLANRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E E + Y + GG+ EY+ ++N +K+PLH+ ++ + + + + +
Sbjct: 200 GVKITFTDNRLELLKSETPKVEVYEYKGGIREYIAYMNREKQPLHEEIIYVQGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ D +LS
Sbjct: 260 EVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKLKENDSNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DS+
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPSIADSV 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D++ +YKN E+Q LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEVQALITALGLGVKGEEFDSSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYKVERG+ +YCY D E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLYKVERGRNHEYCYSDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ + FP+NA Y+IQRFKGLGEMMP QLW+TT+NP+ R LKQ+ IEDAAEA+ +F+ L
Sbjct: 560 LQEILAKFPANANYTIQRFKGLGEMMPGQLWDTTMNPQTRTLKQVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNLVDLDI 645
>gi|124021870|ref|YP_001016177.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9303]
gi|123962156|gb|ABM76912.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9303]
Length = 655
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/627 (59%), Positives = 479/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLV+E++DN+VDEA AG+ I V L D S S+ADNGRGIP D+H
Sbjct: 31 MYIGSTGPRGLHHLVFEVVDNSVDEALAGHCDEILVVLGPDGSASIADNGRGIPTDVHSR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L P K R GT + F PD+++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGTAIGSLRSEAQPASEKGRTGTSVCFKPDEEIFTVGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E + E YF+ GG++EYV ++N +K LH +++ + D +
Sbjct: 209 GVRIVFRDERQPVLDAEGAPHEEVYFYEGGIKEYVTYMNAEKDALHPEIIYVNSEKDNVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K K+ D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPAVIDL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDAKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++A
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEA 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+ S FP A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+
Sbjct: 569 DLQTTLSGFPEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEVQDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMAALDI 655
>gi|78183717|ref|YP_376151.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
gi|78168011|gb|ABB25108.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
Length = 655
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/627 (59%), Positives = 477/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DNAVDEA AG+ I V L AD S SV DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNAVDEALAGHCDRITVILGADGSASVTDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + TL P + GT + F PD Q+FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAAIGTLLSESQPEAEQGETGTTVCFLPDTQIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKED----SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E SD YF+ GG++EYV ++N K LH D++ + DG+
Sbjct: 209 GVQIVFRDERESSLSDAGDPHEEIYFYEGGIKEYVAYMNKAKDALHPDIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC+DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKEADSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGESLSQFLEFNPSVISL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLG+KGE+F +++LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDQKSLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTL+LTFFYRY++ L + G IY+ PPLYKVERGK YCY+++
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYKRELVEGGYIYIACPPLYKVERGKNHTYCYNES 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K F NA Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+
Sbjct: 569 DLQKTLKGFGENAKYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRIEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSKELDMAALDI 655
>gi|33862190|ref|NP_893751.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634408|emb|CAE20093.1| DNA gyrase, subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 655
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/625 (58%), Positives = 475/625 (76%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +IE+ L D S ++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIVLKEDGSALISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV RDG E++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVHVTVSRDGYEFNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G L R+GT I F PD +FT I+FD+ ++ R+RELA+LN
Sbjct: 152 RFEKGIAKGELKSQKQQ-KKPFRKGTTICFKPDTSIFTDGIKFDYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I R E + + E Y + GG++EYV+++N +K+ +H +V+ D + ++
Sbjct: 211 GVKIIFRDERQNLSDGSFKEEIYLYDGGIKEYVEYINKEKESIHSEVIYVDSQKDNVYVE 270
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQWCSD YSD +LG+AN+IRTIDGGTHI+G+K LTRT N++ KK K+ D +LSG
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIDGLKTVLTRTFNAIAKKRGKRKEVDKNLSG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD + E L +Y+E +P+V D IL
Sbjct: 331 ENIREGLTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLIGESLIKYMEFNPNVFDLIL 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ + AA AAKRARDLVR+KSVL SS+LPGKLADCSS P +EI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAAKRARDLVRRKSVLESSTLPGKLADCSSRDPSGAEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F +LRYH+
Sbjct: 451 KQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEEFNVNSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK +YCY++ +L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRDLVEKGFIYIACPPLYKVERGKNHKYCYNENQL 570
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+ F A Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LM
Sbjct: 571 KQTIEDFGEKANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R+E I+ + +++ LDI
Sbjct: 631 GDKVAPRREFIETHSANLDMATLDI 655
>gi|428309704|ref|YP_007120681.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
gi|428251316|gb|AFZ17275.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
Length = 642
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/625 (61%), Positives = 487/625 (77%), Gaps = 10/625 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+ + AD SV+V D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINADGSVTVTDDGRGIPTDTHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRENRIHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+Y RG PVT L + + R GT + F PD Q+F TT I+FD+ T+AGR+RELA+LN
Sbjct: 143 RYERGIPVTEL---IGKPSKEARTGTSVSFKPDTQIFVTTGIEFDYTTLAGRVRELAYLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I D+ E+ + Y++ GG++EYV ++N +K+PLH +++ + + +G +++
Sbjct: 200 AGVRITF--TDNRLEQPRQETYYYEGGIQEYVAYMNREKEPLHQEIIYIQGERNGTQVEV 257
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N++ +K +K+ + +L GE
Sbjct: 258 ALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKAVLTRTMNAIARKRNKIKEGEPNLGGE 317
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +V+ V E LTEYLE P+V D++L
Sbjct: 318 NVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVESLVGEVLTEYLEFRPNVADAVLD 377
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAK
Sbjct: 378 KAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAK 437
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KG++F LRYH+I
Sbjct: 438 QGRDRQFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGDEFDPSQLRYHRI 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G IY+ PPLYKVERG+ YCY D EL
Sbjct: 498 VIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYIYIACPPLYKVERGRNHYYCYSDRELN 557
Query: 539 K-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ FPSNA Y+IQRFKGLGEMMP QLWETT+NP R LK++ IEDAAEA+ VF+ LM
Sbjct: 558 NLIQHEFPSNASYTIQRFKGLGEMMPTQLWETTMNPGTRTLKRVEIEDAAEADRVFTVLM 617
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G RV R+E I+ + +NL LDI
Sbjct: 618 GDRVGPRREFIETYGSRLNLTDLDI 642
>gi|434386573|ref|YP_007097184.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
gi|428017563|gb|AFY93657.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
Length = 645
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/626 (59%), Positives = 485/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE+ DN++DEA AG+ NI++++ A+ SV+V D+GRGIP ++P
Sbjct: 25 MYIGSTGPKGLHHLVYEVADNSIDEALAGHCKNIDISINANGSVTVIDDGRGIPAGINPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKFG GY+VSGGLHGVG+SVVNALS +EV VWR+ + Q
Sbjct: 85 TGKSTIETVLTVLHAGGKFG--DGGYTVSGGLHGVGISVVNALSSHVEVKVWRNQKIHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G V+ L V+P ++R GT + F PD ++F + +FD T+A R +ELA+LN
Sbjct: 143 RFEKGFAVSGL--EVMP-SPENRTGTTVTFQPDPEIFKESTEFDFATLASRFKELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I+ R E ++ + Y+F GG+ EYV +LN +K+PLH+ ++ ++ D + +
Sbjct: 200 GIRISFSDYRLELLGTDEPKVENYYFEGGIREYVSYLNENKQPLHEEIIYISQEQDKVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC DAYSD +LG+AN+IRTIDGGTH++G+K LTRT+NS+ +K +K+ D +L
Sbjct: 260 EVALQWCVDAYSDNILGFANNIRTIDGGTHLDGLKVVLTRTMNSIARKRNKLKEGDANLG 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT I+SV+VPNPEFEGQTKT+LGN EVRK+VD V E LTEYLE P++ D+I
Sbjct: 320 GENIREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRKIVDSIVSEALTEYLEFRPNIADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A AA AA+RA++LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFNAAEAARRAKELVRRKSVLESSTLPGKLADCSSKDPSESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGEDFK E LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEDFKSEQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I ++TDADVDGAHIRTLLLTFFYRYQ++L DEG +Y+ PPLYK+ERG+ YCY + E
Sbjct: 500 RICLMTDADVDGAHIRTLLLTFFYRYQRSLIDEGYVYIACPPLYKLERGRNHYYCYSERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + FP+NA Y+IQRFKGLGEMMP QLWETT++ E R LK++ I+DAAEA+ +F+ L
Sbjct: 560 LQQKIAEFPANANYTIQRFKGLGEMMPQQLWETTMDRETRTLKRVEIQDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + L LDI
Sbjct: 620 MGDRVAPRREFIETYGPKLGLMDLDI 645
>gi|72383051|ref|YP_292406.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
gi|72002901|gb|AAZ58703.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
Length = 655
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/627 (60%), Positives = 480/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNAVDEA AG+ I + L D S SV+DNGRGIP DLHP
Sbjct: 31 MYIGSTGSKGLHHLVYEVVDNAVDEALAGHCDQITILLCEDGSASVSDNGRGIPTDLHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVRRQQQVHFQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L L K+ GT + F PD Q+FT I F++ ++ R+RELA+LN
Sbjct: 149 RFERGASIGSLKSENLSKSDKNLTGTTVCFKPDDQIFTDGISFEYGILSSRLRELAYLNG 208
Query: 181 KLTIALR---KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R K+ +D + Y E YF+ GG++EYV+++ K LH +++ + DG+
Sbjct: 209 GVRIVFRDERKQSNDSSQTPYEEVYFYEGGIKEYVEYMTKAKDSLHPEIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ A+QWC DAYSD++LG+AN+IRTIDGGTHIEG+K LTRTLNS KK KD D +L
Sbjct: 269 VEAAMQWCVDAYSDSILGFANNIRTIDGGTHIEGLKTVLTRTLNSFAKKRGKRKDGDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGTALSQYLEFNPGVIDL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR+FQAILPLRGKILN+E+ D+A MYKN EIQ+LI ALGLG+KGEDF+ + LRY
Sbjct: 449 SAKQGRDRKFQAILPLRGKILNIEKTDDAKMYKNTEIQSLITALGLGIKGEDFEVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKV RGK +YCY+++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKDLVEGGYIYIACPPLYKVTRGKNHKYCYNES 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+++K +SF A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+
Sbjct: 569 DMQKTLASFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRMMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + ++L LDI
Sbjct: 629 LMGDKVAPRREFIETHSVDLDLATLDI 655
>gi|298491608|ref|YP_003721785.1| DNA gyrase subunit B ['Nostoc azollae' 0708]
gi|298233526|gb|ADI64662.1| DNA gyrase, B subunit ['Nostoc azollae' 0708]
Length = 645
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/626 (61%), Positives = 489/626 (78%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV + AD SV+V D+GRGIP+D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEVDINADGSVTVTDDGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E+ Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDNKEHLQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y R PVT L V P + R GT I F PD Q+FT +I+FD+ T++GR+RELA+LN
Sbjct: 143 RYERSFPVTEL--QVKPY-KEPRTGTSITFKPDTQIFTISIEFDYITLSGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EYV ++N +K+PLH+ ++ + + + + +
Sbjct: 200 GVKIIFTDHRLELLKSDTPRIEIYEYKGGIKEYVAYMNREKQPLHEEIIYVQGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNAIARKRNKIKENESNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + D+I
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSFVGEVLTEYLEFHPSIADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDSAQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRY++ L ++G IY+ PPLYKVERGK +YCY + E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYKRALIEQGFIYIACPPLYKVERGKNHEYCYSERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ ++ P+ A Y+IQRFKGLGEMMP QLW TT+NPE R +KQ+ IEDAAEA+ +F+ L
Sbjct: 560 LQQHIATLPTKANYNIQRFKGLGEMMPEQLWTTTMNPETRKMKQVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|443321835|ref|ZP_21050875.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
gi|442788451|gb|ELR98144.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
Length = 640
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/623 (60%), Positives = 483/623 (77%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IE+ L D S SV D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEIELNEDGSCSVTDDGRGIPTDTHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREKKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L P +++QGT + F PD ++F+ +FD+NT+AGR++ELA+LN
Sbjct: 143 RYERGIPVTELISEPHP---ENQQGTSVSFLPDAEIFSETREFDYNTLAGRLKELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I PE+ + Y + GG+ EYV ++ +K+PLH D++ + + + +++A
Sbjct: 200 GVKITFSDRRQTPERVE--AYCYEGGIREYVTYMTREKEPLHKDIIYVSGERNDVQVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +L+GE+
Sbjct: 258 LQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTINTVARKRNKIKENEANLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE +P V DS++ K
Sbjct: 318 VREGLTGVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFNPHVADSVIDK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEIF+VEGDSAGGSAKQ
Sbjct: 378 AIQAFKAAEAARNARELVRRKSVLESSPLPGKLADCSTRDPAESEIFLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLG+KGE+F ALRYH+I+
Sbjct: 438 GRDRRFQAILPLRGKILNIEKTDDSKIYKNNEIQSLITALGLGIKGEEFDASALRYHRIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+ YCY D EL++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKIERGRNHYYCYSDRELQQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++FP NA Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+ LMG
Sbjct: 558 QLATFPPNASYNIQRFKGLGEMMPAQLWETTMNPESRTLKRIEIEDAAEADRIFTVLMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + +NL LDI
Sbjct: 618 RVAPRREFIETHGSRLNLVDLDI 640
>gi|443477130|ref|ZP_21066998.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
gi|443017788|gb|ELS32155.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
Length = 646
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/623 (60%), Positives = 475/623 (76%), Gaps = 6/623 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGP+GLHHLV+E++DN+VDEA AG+ I V LL D SV V+DNGRGIP D HP
Sbjct: 29 MYIGTTGPKGLHHLVFEVVDNSVDEALAGHCDRILVELLPDGSVCVSDNGRGIPTDTHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG GY VSGGLHGVG+SVVNALSE +EV+VWR Y Q
Sbjct: 89 TGKSALETVLTVLHAGGKFG--DGGYKVSGGLHGVGISVVNALSEWVEVSVWRLEKVYKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R+GT++RF PD Q+FTT +F+++ +A R++ELA+LN
Sbjct: 147 RYERGFPVTELIASK-SEEPIQRRGTQVRFKPDAQIFTTQTEFEYDILASRLKELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D + + + Y + GG+ EYV ++ +K+ +H D++ + D + +++A
Sbjct: 206 GVKIEF--SDRRGTEVRTDIYCYEGGIREYVAYMTREKEAIHPDIIYVNGERDNVVVEVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC D+Y+D +LG+AN+IRTIDGGTH+EG+K LTRT+N+ ++ K +K+ + +L+GE+
Sbjct: 264 LQWCIDSYNDNVLGFANNIRTIDGGTHLEGLKTVLTRTINATARRLKKIKEGESNLAGEN 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+V +PEFEGQTKT+LGN EVR +VD V E L EYLE HP V SI+ K
Sbjct: 324 VREGLTAVISVKVTDPEFEGQTKTKLGNTEVRGIVDSFVGEVLNEYLEFHPAVATSIIEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A AA AA+RAR+LVR+KS L SS+LPGKLADCSS P+ESEIFIVEGDSAGGSAKQ
Sbjct: 384 ALQAFNAAEAARRARELVRRKSALESSTLPGKLADCSSRDPKESEIFIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR +QAILPLRGK+LN+ER D++ +YKN EIQ LI GLG+KGEDF + LRYHKII
Sbjct: 444 GRDRHYQAILPLRGKVLNIERADDSKIYKNNEIQALITGCGLGIKGEDFNESQLRYHKII 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+L DADVDGAHIRTLLLTFFYRYQ+ L D G IY+G PPLYKVERGK QYCY D +L+
Sbjct: 504 LLADADVDGAHIRTLLLTFFYRYQRELLDRGYIYIGCPPLYKVERGKNAQYCYTDRDLQA 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ SFP+NA Y+IQRFKGLGEMMP QLWETT+NP R LK+L IEDAAEA+ +F+ LMG
Sbjct: 564 LLESFPANANYNIQRFKGLGEMMPQQLWETTMNPATRSLKRLTIEDAAEADRIFTILMGD 623
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
+V R+E I+ + + + LDI
Sbjct: 624 KVAPRREFIETYGSKLAITELDI 646
>gi|33862394|ref|NP_893954.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9313]
gi|33640507|emb|CAE20296.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9313]
Length = 655
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/627 (59%), Positives = 478/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLV+E++DN+VDEA AG+ I V L D S S++DNGRGIP D+H
Sbjct: 31 MYIGSTGPRGLHHLVFEVVDNSVDEALAGHCDEILVVLGPDGSASISDNGRGIPTDVHSR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L P K R GT + F PD+++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGTAIGSLRSEAQPASEKGRTGTSVCFKPDEEIFTVGIVFDYATLSTRLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E + E YF+ GG++EYV ++N +K LH +++ + D +
Sbjct: 209 GVRIVFRDERQPVLDAEGAPHEEVYFYEGGIKEYVTYMNAEKDALHPEIIYVNSEKDNVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K K+ D +L
Sbjct: 269 VEAALQWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D
Sbjct: 329 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPAVIDL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDSKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEV 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+ S FP A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+
Sbjct: 569 DLQTTLSGFPEKANYTIQRFKGLGEMMPKQLWETTMDPSARMMKRVEVQDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMAALDI 655
>gi|428303880|ref|YP_007140705.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
gi|428245415|gb|AFZ11195.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
Length = 646
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/627 (61%), Positives = 488/627 (77%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV + AD SVSV D+GRGIP D+H
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVQINADGSVSVTDDGRGIPTDIHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E++Q
Sbjct: 85 TGKSALETVMTILHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKEHNQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ L P+ ++R GT I F PD ++FT +I+FD+ TI+GR+RELA+LN
Sbjct: 143 RFERGIPIGELKAQ--PI-KENRTGTSICFKPDTEIFTVSIEFDYTTISGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKN---QYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I + KN + Y + GG+ EY+ ++NT+K+PLH+ V+ + + + + +
Sbjct: 200 GVKITFSDQRIHLLKNNEPKVETYCYEGGIREYITYMNTEKQPLHEEVIYIQGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N+ +K +K+ D +L
Sbjct: 260 EVALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKAVLTRTMNTTARKRNKLKEADSNLG 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E TEYL+ HP+V D+I
Sbjct: 320 GENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEIFTEYLDFHPNVADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A AA AA+RAR+LVR+KSVL SS LPGKLADCS+ P ESEI+IVEGDSAGGS
Sbjct: 380 LEKAIQAFNAAEAARRARELVRRKSVLESSPLPGKLADCSTKDPTESEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDSTQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L DEG IY+ PPLYKVERG+ YCY + E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRALVDEGYIYIACPPLYKVERGRNHYYCYSERE 559
Query: 537 LKKVKSS-FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L K+ ++ FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+
Sbjct: 560 LTKLTTTEFPSNANYTIQRFKGLGEMMPTQLWDTTMNPESRTLKRVEIEDAAEADRIFTV 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ + +NL LDI
Sbjct: 620 LMGDRVAPRREFIETYGSRLNLVDLDI 646
>gi|33864631|ref|NP_896190.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
gi|33632154|emb|CAE06610.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
Length = 655
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/628 (59%), Positives = 477/628 (75%), Gaps = 9/628 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ I V L D S S++DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILVTLGEDGSASISDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L P GT + F PD ++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAAIGSLASEDQPASEAGETGTTVCFKPDIEIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGI 234
+ I R E + +N+ E YF+ GG++EYV ++NT+K LH D++ + DG+
Sbjct: 209 GVRIVFRDE-RESARNEVGEAHEETYFYEGGIKEYVAYMNTEKDALHPDIIYVNSEKDGV 267
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +
Sbjct: 268 QVEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSN 327
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+
Sbjct: 328 LAGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEGLSQFLEFNPSVIG 387
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAG
Sbjct: 388 LILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAG 447
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LR
Sbjct: 448 GSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLR 507
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YH+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 508 YHRVVIMTDADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNE 567
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+L+K SF A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+
Sbjct: 568 GDLQKTLQSFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFT 627
Query: 595 SLMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 628 ILMGDKVAPRREFIETHSAELDMTALDI 655
>gi|186686392|ref|YP_001869588.1| DNA gyrase subunit B [Nostoc punctiforme PCC 73102]
gi|186468844|gb|ACC84645.1| DNA gyrase, B subunit [Nostoc punctiforme PCC 73102]
Length = 645
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/630 (60%), Positives = 489/630 (77%), Gaps = 17/630 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV + AD SV+V D+GRGIP+D H
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDINADGSVTVTDDGRGIPVDTHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHLQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R GT + F PD Q+FTT+I+FD+ T++GR+RELA+LN
Sbjct: 143 RYERGIPVTELQTKPY---KEARTGTSVTFKPDTQIFTTSIEFDYITLSGRLRELAYLNA 199
Query: 181 KLTIA-------LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVD 232
+ I L K D+ P+ YN + GG++EY+ ++N +K+PLH+ ++ + + +
Sbjct: 200 GVKITFTDNRLELLKSDT-PKVESYN---YKGGIKEYIAYMNREKQPLHEEIIYVQGERN 255
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ ++++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ +
Sbjct: 256 NVQVEVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENE 315
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
+LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP +
Sbjct: 316 PNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPAI 375
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
DSIL K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDS
Sbjct: 376 ADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDS 435
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKG++F
Sbjct: 436 AGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGDEFDSNQ 495
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPL+KVERG+ +YCY
Sbjct: 496 LRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLFKVERGRNHEYCY 555
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D E + + FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +
Sbjct: 556 SDREKNQAIAKFPANANYTIQRFKGLGEMMPQQLWDTTMNPETRKMKQVEIEDAAEADRI 615
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F+ LMG RV R+E I+ + +N LDI
Sbjct: 616 FTILMGDRVAPRREFIETYGSKLNFTDLDI 645
>gi|75908731|ref|YP_323027.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
gi|75702456|gb|ABA22132.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
Length = 645
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/626 (60%), Positives = 483/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV + AD SV+V D+GRGIP D H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINADGSVTVTDDGRGIPTDTHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHIQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R GT + F PD Q+FT +I+FD+ T++ R+RELA+LN
Sbjct: 143 RYERGIPVTELIAKPY---KEARTGTSVSFKPDSQIFTNSIEFDYITLSSRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + + I
Sbjct: 200 GVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKENEANLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + D+I
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI+IVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTL+LTFFYRYQ+ L ++G IY+ PPLYKVERG+ +YCY + +
Sbjct: 500 RIIIMTDADVDGAHIRTLILTFFYRYQRALIEQGFIYIACPPLYKVERGRNYEYCYSERD 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + FP+NA Y+IQRFKGLGEMMP QLW TT+NPE R LK++ IEDAAEA+ +F+ L
Sbjct: 560 LQQAIAKFPANANYTIQRFKGLGEMMPEQLWTTTMNPETRTLKRVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNLTDLDI 645
>gi|124026793|ref|YP_001015908.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL1A]
gi|123961861|gb|ABM76644.1| DNA gyrase, subunit B [Prochlorococcus marinus str. NATL1A]
Length = 655
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/627 (59%), Positives = 481/627 (76%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNAVDEA AG+ I + L D S SV+DNGRGIP DLHP
Sbjct: 31 MYIGSTGSKGLHHLVYEVVDNAVDEALAGHCDQITILLCEDGSASVSDNGRGIPTDLHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVRRQQQVHFQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L L K+ GT + F PD Q+FT I F++ ++ R+RELA+LN
Sbjct: 149 RFERGASIGSLKSENLSKSDKNLTGTTVCFKPDDQIFTDGISFEYGILSSRLRELAYLNG 208
Query: 181 KLTIALR---KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R K+ +D + + E YF+ GG++EYV+++ K LH +++ + DG+
Sbjct: 209 GVRIVFRDERKQSNDSSQTPHEEVYFYEGGIKEYVEYMTKAKDSLHPEIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ A+QWC DAYSD++LG+AN+IRTIDGGTHIEG+K LTRTLNS KK KD D +L
Sbjct: 269 VEAAMQWCVDAYSDSILGFANNIRTIDGGTHIEGLKTVLTRTLNSFAKKRGKRKDGDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V L++YLE +P+V+D
Sbjct: 329 AGENIREGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGTSLSQYLEFNPNVIDL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR+FQAILPLRGKILN+E+ D+A MYKN EIQ+LI ALGLG+KGEDF+ + LRY
Sbjct: 449 SAKQGRDRKFQAILPLRGKILNIEKTDDAKMYKNTEIQSLITALGLGIKGEDFEVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKV RGK +YCY+++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKDLVEGGYIYIACPPLYKVTRGKNHKYCYNES 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+++K +SF A Y+IQRFKGLGEMMP QLW+TT++P RM+K++ IEDA EA+ +F+
Sbjct: 569 DMQKTLASFGEKANYTIQRFKGLGEMMPKQLWDTTMDPTTRMMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + ++L LDI
Sbjct: 629 LMGDKVAPRREFIETHSVDLDLATLDI 655
>gi|434394941|ref|YP_007129888.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
gi|428266782|gb|AFZ32728.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
Length = 646
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/630 (61%), Positives = 488/630 (77%), Gaps = 16/630 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTDTHPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWIEVTVWRDKHVHVQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PVT L V P + + GT + F PD +FTT +FD+ T+AGR+RELA+LN
Sbjct: 143 RFERGIPVTEL--QVKP-SKEAKTGTSVTFQPDATIFTTGTEFDYITLAGRLRELAYLNA 199
Query: 181 --KLTIALRK----EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDG 233
K+T + R+ + S+P+ Y + GG++EYV ++N +K+PLH+ + F + + +
Sbjct: 200 GVKITFSDRRLELLKSSEPKVETYE---YKGGIKEYVAYMNREKQPLHEEIIFVQGERNN 256
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ +++ALQW DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD +
Sbjct: 257 VQVEVALQWSVDAYTDNILGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKDNEP 316
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
+LSGEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP+V
Sbjct: 317 NLSGEHVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPNVA 376
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
DS+L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS ESEIFIVEGDSA
Sbjct: 377 DSVLDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDASESEIFIVEGDSA 436
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 473
GGSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F L
Sbjct: 437 GGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDASQL 496
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPL+KVERG+ YCY
Sbjct: 497 RYHRIVIMTDADVDGAHIRTLLLTFFYRYQRELIDQGYIYIACPPLFKVERGRSHYYCYS 556
Query: 534 DAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL+ ++ FP NA Y+IQRFKGLGEMMP QLWETT+NPE R +KQ+ IEDAAEA+ +
Sbjct: 557 DRELQNLIQHEFPDNANYTIQRFKGLGEMMPDQLWETTMNPETRTMKQVEIEDAAEADRI 616
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F+ LMG RV R+E I+ + +NL LDI
Sbjct: 617 FTILMGDRVAPRREFIETYGSRLNLTELDI 646
>gi|116071704|ref|ZP_01468972.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
gi|116065327|gb|EAU71085.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
Length = 655
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/627 (59%), Positives = 476/627 (75%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DNAVDEA AG+ I V L AD S SV DNGRGIP D+HP
Sbjct: 31 MYIGTTGPRGLHHLVYEVVDNAVDEALAGHCDRITVILGADGSASVTDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + +L + GT + F PD Q+FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAAIGSLLSESQSEAEQGETGTTVCFLPDLQIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKED----SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E SD YF+ GG++EYV ++N K LH D++ + DG+
Sbjct: 209 GVQIVFRDEREASLSDAGDPHEEIYFYEGGIKEYVAYMNKAKDALHPDIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWC+DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L
Sbjct: 269 VEAALQWCADAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKDADSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVISL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLG+KGE+F +++LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDQKSLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTL+LTFFYRY++ L + G IY+ PPLYKVERGK YCY+++
Sbjct: 509 HRVVIMTDADVDGAHIRTLILTFFYRYKRELVEGGYIYIACPPLYKVERGKNHTYCYNES 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K F NA Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+
Sbjct: 569 DLQKTLKGFGENAKYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRIEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSKELDMAALDI 655
>gi|119512311|ref|ZP_01631397.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
gi|119463024|gb|EAW43975.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
Length = 645
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/626 (60%), Positives = 483/626 (77%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV + AD SV+V D+GRGIP D H
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDINADGSVTVTDDGRGIPTDTHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVGLSVVNALS+ LEVTVWRD + Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGLSVVNALSDVLEVTVWRDNKVHVQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L D + + GT I F PD Q+F +++FD+ TIAGR+RELA+LN
Sbjct: 143 RYERGVPVTELQAKP---DKEGKTGTSINFKPDSQIFINSVEFDYITIAGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + +
Sbjct: 200 GVKIIFGDHRLELLKSDTPRIETYEYKGGIKEYIAYMNRDKQPLHEEIIYVHGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNAIARKRNKIKENESNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE HP + DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFHPGIADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKG++F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGDEFDSTQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+KVERGK +YCY + E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFIYIACPPLFKVERGKNHEYCYSERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + PSNA Y+IQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ L
Sbjct: 560 LQQYLGTLPSNANYNIQRFKGLGEMMPQQLWDTTMNPESRKMKQVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +N LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNFTDLDI 645
>gi|78211642|ref|YP_380421.1| DNA gyrase subunit B [Synechococcus sp. CC9605]
gi|78196101|gb|ABB33866.1| DNA gyrase, B subunit [Synechococcus sp. CC9605]
Length = 655
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/627 (60%), Positives = 474/627 (75%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V L D S SV+DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDRIVVVLGEDGSASVSDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + L P GT + F PD ++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAAIGVLASESQPAAESGETGTTVCFKPDLEIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E N + E YF+ GG++EYV ++N +K LH D++ + DG+
Sbjct: 209 GVRIVFRDERESARDGEGNPHEETYFYEGGIKEYVAYMNKEKDALHPDIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVIGL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEG 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+
Sbjct: 569 DLQKTLEGFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMAALDI 655
>gi|428771456|ref|YP_007163246.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
gi|428685735|gb|AFZ55202.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
Length = 649
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/623 (61%), Positives = 481/623 (77%), Gaps = 7/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+ L AD SVSV D+GRGIP D+HP
Sbjct: 33 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDLNADGSVSVTDDGRGIPTDIHPR 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE ++VTVWR + Q
Sbjct: 93 TKKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVQVTVWRKDKVHTQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP+T L D+ GT + F PD Q+FT +FD+N ++ R+RELA+LN
Sbjct: 151 RYERGKPITDLETK--DNDTGHSTGTSVSFLPDNQIFTETTEFDYNLLSNRLRELAYLNA 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I + PE+ + Y + GG++EYV ++ +K+ LH D++ + +G+ +++A
Sbjct: 209 GVKITFTDKRVTPEREE--TYCYEGGIKEYVTYMTREKEVLHQDIIYTSGEKNGVQVEVA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC DAYSDT+LG+AN+IRTIDGGTH+EG+K LTRTLN++G+K +K+ D +L GE+
Sbjct: 267 LQWCIDAYSDTILGFANNIRTIDGGTHLEGLKTVLTRTLNNIGRKRNKIKENDSNLGGEN 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V DSI+ K
Sbjct: 327 VREGLTAVISVKVPDPEFEGQTKTKLGNSEVRGIVDSLVGEALNEYLEFNPHVADSIIEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCSS P ESEIF+VEGDSAGGSAKQ
Sbjct: 387 AIQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPAESEIFLVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KG++F LRYH I+
Sbjct: 447 GRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGDEFDASQLRYHHIV 506
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYK+ERGK YCY D EL++
Sbjct: 507 IMTDADVDGAHIRTLLLTFFYRYQRELVEQGYIYIACPPLYKLERGKNHFYCYSDRELQQ 566
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ FP NA Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDAAEA+ +F+ LMG
Sbjct: 567 KIAEFPPNANYNIQRFKGLGEMMPEQLWDTTMNPETRMMKRVEIEDAAEADRIFTVLMGD 626
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ +NL LD+
Sbjct: 627 RVAPRREFIETHGPRLNLTELDV 649
>gi|354567214|ref|ZP_08986384.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
gi|353543515|gb|EHC12973.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
Length = 645
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/626 (61%), Positives = 478/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY +++EV L AD SV+V D+GRGIP +
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEVDLNADGSVTVTDDGRGIPTGIVAK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSGLETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L ++ R GT + F PD Q+FTT +FD T+A R+RELA+LN
Sbjct: 143 RYERGIPVTEL---IVKPYKDHRTGTSVSFLPDSQIFTTGTEFDFTTLASRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R + ++ + Y + GG+ EY+ ++N DK+PLH+ V+ + + + + +
Sbjct: 200 GVKITFTDHRLQLLKSDQPKVETYEYKGGIREYITYINADKQPLHEEVIYVQGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LS
Sbjct: 260 EVALQWCTDAYTDNILGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKLKDSEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D+I
Sbjct: 320 GEHVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGETLTEYLEFHPSVADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI++VEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPRESEIYLVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGVKGEEFDASQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G +Y+ PPLYK+ERGK +YCY D E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGYVYIACPPLYKIERGKNYKYCYSDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ S P NA Y+IQRFKGLGEMMP QLW TT+NPE R LKQ+ IEDAAEA+ +F+ L
Sbjct: 560 KDQYISQLPENANYTIQRFKGLGEMMPEQLWSTTMNPETRTLKQVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNLKDLDI 645
>gi|119487794|ref|ZP_01621303.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
gi|119455627|gb|EAW36764.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
Length = 645
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/626 (61%), Positives = 482/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG+ ++IEV AD SV+V D+GRGIP+D+H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDFNADGSVTVTDDGRGIPVDVHSK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EV V RD +Y Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVQVLRDETQYTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PV L P K + GT ++F PD +FTT I+FD+ TIA R+RELA+LN
Sbjct: 143 RYQRGVPVDELQSK--PSQGK-QTGTSVQFLPDTTIFTTGIEFDYATIANRLRELAYLNA 199
Query: 181 KLTIALRKEDSDP---EKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I L D E+ + + + GG+ EY+ ++N +K+PLH DV+ + + + I
Sbjct: 200 GVRITLTDNRLDLIQLEEAKTESFCYEGGIREYIAYMNREKQPLHEDVIYVSGERNNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N+ +K +K+ + +L
Sbjct: 260 EVALQWCVDAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTMNNFARKRNKLKENESNLG 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP + D++
Sbjct: 320 GENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPHIADAV 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS+ P ESEIF+VEGDSAGGS
Sbjct: 380 LEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSTRIPAESEIFLVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLG++GEDF LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDSKIYKNNEIQSLITALGLGIRGEDFDSSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERG+ YCY+D E
Sbjct: 500 KIIIMTDADVDGAHIRTLLLTFFYRYQRELVEQGFIYIACPPLYKVERGRNHYYCYNDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + FPSNA Y+IQRFKGLGEMMP QLW TT+NPE RM+KQ+ +EDAA+A+ VF+ L
Sbjct: 560 LQERLAEFPSNANYNIQRFKGLGEMMPEQLWNTTMNPETRMIKQVEVEDAAQADNVFTVL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ A +NL LDI
Sbjct: 620 MGDRVAPRREFIETNAPRLNLVDLDI 645
>gi|434398522|ref|YP_007132526.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
gi|428269619|gb|AFZ35560.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
Length = 642
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/623 (60%), Positives = 482/623 (77%), Gaps = 6/623 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IE+ L AD SV V D+GRGIP +HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIELNADGSVRVTDDGRGIPTGIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDQKIHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + R GT + F+PD ++FT I F++N +AGR+RELA+LN
Sbjct: 143 RYERGIPSGDLVVQA-NIQEPQRTGTAVHFFPDTKIFTETIHFEYNVLAGRLRELAYLNA 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D E+ + YF+ GG++EYV ++ +K+PLH D++ + + +G+ I++A
Sbjct: 202 GVKITF--TDHRIEETRQEIYFYEGGIKEYVTYMTREKEPLHQDIIYVQGEKNGVNIEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC DA++D +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +L GE+
Sbjct: 260 LQWCVDAFNDNLLGFANNIRTIDGGTHLEGLKTVLTRTINNIARKRNKIKENESNLGGEN 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V DS++ K
Sbjct: 320 VREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLNEYLEFNPQVADSVIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCSS P ESEIF+VEGDSAGGSAKQ
Sbjct: 380 AVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPGESEIFLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+++
Sbjct: 440 GRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSSQLRYHRVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYKVERG+ YCY D EL++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYQRELVDQGYVYIACPPLYKVERGRNHYYCYSDRELQQ 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+ LMG
Sbjct: 560 LTREFPANANYTIQRFKGLGEMMPEQLWETTMNPETRTLKRVEIEDAAEADRIFTVLMGD 619
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + ++L+ LDI
Sbjct: 620 RVAPRREFIETHGSRLDLNELDI 642
>gi|218246132|ref|YP_002371503.1| DNA gyrase subunit B [Cyanothece sp. PCC 8801]
gi|257059181|ref|YP_003137069.1| DNA gyrase subunit B [Cyanothece sp. PCC 8802]
gi|218166610|gb|ACK65347.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8801]
gi|256589347|gb|ACV00234.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8802]
Length = 641
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/623 (60%), Positives = 484/623 (77%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + +D SV+V D+GRGIP D+HP
Sbjct: 26 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINSDGSVTVTDDGRGIPTDIHPT 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE + VTVWR+G + Q
Sbjct: 86 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVNVTVWREGNIHTQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT+L + P S GT I F PD ++F+ I+FD+NT++GR+RELA+LN
Sbjct: 144 RYERGNPVTSLAANPDPDHST---GTSISFLPDIEIFSGGIEFDYNTLSGRLRELAYLNA 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D+ P + Y + GG++EYV ++ DK LH D++ + +G+ I++A
Sbjct: 201 GVKITF--TDNRPAEIHQETYCYEGGIKEYVAYMCRDKDALHQDIIYVSGEKNGVQIEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +L GE+
Sbjct: 259 LQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTINNVARKRNKIKENEANLGGEN 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K
Sbjct: 319 VREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLNEYLEFNPQVADNIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+ PEESEIF+VEGDSAGGSAKQ
Sbjct: 379 AVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRDPEESEIFLVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+++
Sbjct: 439 GRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPSQLRYHRVV 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYKVERG+ YCY++ EL++
Sbjct: 499 IMTDADVDGAHIRTLLLTFFYRYQRELVDQGYVYIACPPLYKVERGRNHVYCYNERELQE 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S P+NA Y+IQRFKGLGEMMP QLWETT+NPE R +K++ IEDAAEA+ +F+ LMG
Sbjct: 559 HLNSLPANANYTIQRFKGLGEMMPTQLWETTMNPETRTMKRVEIEDAAEADRIFTVLMGD 618
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ +NL LDI
Sbjct: 619 RVAPRREFIETYGPKLNLTDLDI 641
>gi|67920055|ref|ZP_00513575.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
gi|67857539|gb|EAM52778.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
Length = 642
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/627 (60%), Positives = 485/627 (77%), Gaps = 16/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + AD S++V DNGRGIP D+HP
Sbjct: 27 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINADGSITVTDNGRGIPTDVHPT 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q
Sbjct: 87 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVVVNVWRDNNIHTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+ +L D K GT + F PD Q+F+ I+FD++T+AGR++ELA+LN
Sbjct: 145 RYERGIPLGSLDTKP---DKKHSTGTSVSFLPDIQIFSGGIEFDYSTLAGRLKELAYLNA 201
Query: 181 KLTIAL---RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I RKE+ YNE Y + GG++EYV ++ DK PLH D++ + +G
Sbjct: 202 GVKITFTDHRKEEP------YNETYCYEGGIKEYVTYMCRDKDPLHQDIIYVSGEKNGTQ 255
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ D +L
Sbjct: 256 VEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKENDANL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYLE +P V D+
Sbjct: 316 GGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFNPQVADN 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGG
Sbjct: 376 IIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRY
Sbjct: 436 SAKQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSEQLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G +Y+ PPLYKVERG+ YCY++
Sbjct: 496 HRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIACPPLYKVERGRNHMYCYNER 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L++ +S P+NA Y+IQRFKGLGEMMP QLWETT+NPE R +KQ+ IEDAAEA+ +F+
Sbjct: 556 QLQEHINSLPNNANYTIQRFKGLGEMMPTQLWETTMNPETRSMKQVEIEDAAEADRIFTI 615
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +NL LDI
Sbjct: 616 LMGDRVAPRREFIETYGPKLNLTDLDI 642
>gi|434405383|ref|YP_007148268.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
gi|428259638|gb|AFZ25588.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
Length = 646
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/627 (60%), Positives = 485/627 (77%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN+VDEA AG+ +++EV + AD SV+V D+GRGIP D+HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSVDEALAGHCTHVEVDINADGSVTVTDDGRGIPTDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWREKKVFTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG VT L + R GT + F PD Q+FTT+I+FD+ T++GR+RELA+LN
Sbjct: 143 RYERGAAVTELQAKSY---KEARTGTSVTFKPDTQIFTTSIEFDYITLSGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N +K PLH+ ++ + + + + I
Sbjct: 200 GVKITFTDHRLELLKSDTAKVETYEYKGGIKEYIAYMNREKLPLHEEIIYVQGERNNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LS
Sbjct: 260 EVSLQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPGVADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEI+IVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPSESEIYIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKG++F LRYH
Sbjct: 440 AKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEIQALITALGLGVKGDEFDAAQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDA 535
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+KVERG+ +YCY D
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFIYIACPPLFKVERGRSDPKYCYSDR 559
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL++ ++FPSNA Y+IQRFKGLGEMMP QLW TT+NPE R LKQ+ IEDAAEA+ +F+
Sbjct: 560 ELQQHIATFPSNANYNIQRFKGLGEMMPAQLWTTTMNPETRTLKQVEIEDAAEADRIFTI 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ + +NL LDI
Sbjct: 620 LMGDRVAPRREFIETYGSKLNLTDLDI 646
>gi|260436552|ref|ZP_05790522.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
gi|260414426|gb|EEX07722.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
Length = 655
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/627 (59%), Positives = 473/627 (75%), Gaps = 7/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ I V L D S +V+DNGRGIP D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDRILVVLGEDGSAAVSDNGRGIPTDVHPR 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q
Sbjct: 91 TGKSALETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + L P GT + F PD ++FT I FD+ T++ R+RELA+LN
Sbjct: 149 RFERGAAIGELASESQPAAESGETGTTVCFKPDLEIFTGGIVFDYATLSARLRELAYLNG 208
Query: 181 KLTIALRKEDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I R E D E + E YF+ GG++EYV ++N +K LH +++ + DG+
Sbjct: 209 GVRIVFRDERESARDEEGKPHEETYFYEGGIKEYVAYMNKEKDALHPEIIYVNSEKDGVQ 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQWCSDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L
Sbjct: 269 VEAALQWCSDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE++REGLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+
Sbjct: 329 AGENIREGLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVISL 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGG
Sbjct: 389 ILEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRY
Sbjct: 449 SAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+++I+TDADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++
Sbjct: 509 HRVVIMTDADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEG 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L+K F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+
Sbjct: 569 DLQKTLEGFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDAIEADRIFTI 628
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG +V R+E I+ + +++ LDI
Sbjct: 629 LMGDKVAPRREFIETHSAELDMAALDI 655
>gi|416374474|ref|ZP_11683197.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
gi|357266694|gb|EHJ15286.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
Length = 642
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/627 (60%), Positives = 485/627 (77%), Gaps = 16/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + AD S++V DNGRGIP D+HP
Sbjct: 27 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINADGSITVTDNGRGIPTDVHPT 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q
Sbjct: 87 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVVVNVWRDNNIHTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+ +L D K GT + F PD Q+F+ I+FD++T+AGR++ELA+LN
Sbjct: 145 RYERGIPLGSLDTKP---DKKHSTGTSVSFLPDIQIFSGGIEFDYSTLAGRLKELAYLNA 201
Query: 181 KLTIAL---RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I RKE+ YNE Y + GG++EYV ++ DK PLH D++ + +G
Sbjct: 202 GVKITFTDHRKEEP------YNETYCYEGGIKEYVTYMCRDKDPLHQDIIYVSGEKNGTQ 255
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ D +L
Sbjct: 256 VEVALLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKENDANL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYLE +P V D+
Sbjct: 316 GGENVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFNPQVADN 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGG
Sbjct: 376 IIEKAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRY
Sbjct: 436 SAKQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSEQLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
H+I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G +Y+ PPLYKVERG+ YCY++
Sbjct: 496 HRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIACPPLYKVERGRNHVYCYNER 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L++ +S P+NA Y+IQRFKGLGEMMP QLWETT+NPE R +KQ+ IEDAAEA+ +F+
Sbjct: 556 QLQEHINSLPNNANYTIQRFKGLGEMMPTQLWETTMNPETRSMKQVEIEDAAEADRIFTI 615
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +NL LDI
Sbjct: 616 LMGDRVAPRREFIETYGPKLNLTDLDI 642
>gi|126697163|ref|YP_001092049.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9301]
gi|126544206|gb|ABO18448.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9301]
Length = 655
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/625 (58%), Positives = 482/625 (77%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHL+YE++DN+VDEA AG+ +IE+ L AD S ++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLIYEVVDNSVDEALAGHCDHIEIVLRADGSALISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE ++VTV+RDG E++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVKVTVYRDGSEFNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G L S ++GT I F PDK +F+ I+F++ ++ R+RELA+LN
Sbjct: 152 RFEKGISKGELESKKQTGKS-SKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I R E + + E Y + GG++EYV+++N +K+ +H +++ + + ++
Sbjct: 211 GVKIVFRDERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKESIHPEIIYVDSQKENVYVE 270
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQWCSD YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+G
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL
Sbjct: 331 ENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLIL 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F + +LRYH+
Sbjct: 451 KQGRDRNFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDESSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQL 570
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K F NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LM
Sbjct: 571 KDTIQGFGENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R+E I+ ++ +++ LDI
Sbjct: 631 GDKVAPRREFIETHSSNLDMATLDI 655
>gi|78780112|ref|YP_398224.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
gi|78713611|gb|ABB50788.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
Length = 655
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/625 (58%), Positives = 482/625 (77%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +IE+ L +D S ++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIVLQSDGSALISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G L ++GT I F PDK +F+ I+F++ ++ R+RELA+LN
Sbjct: 152 RFEKGVSQNVLQSKKQTKKPF-KKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I R E + + E Y + GG++EYVQ++N +K+ +H D++ + + ++
Sbjct: 211 GVKIVFRDERNKLSDGSFKEEIYLYQGGIKEYVQYMNAEKEAIHPDIIYVDSQKENVYVE 270
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQWCSD YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+G
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+++E +P +LD +L
Sbjct: 331 ENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKFMEFNPGILDLVL 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR+FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+
Sbjct: 451 KQGRDRKFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK +YCY++ +L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGYIYIACPPLYKVERGKNHKYCYNENQL 570
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K SF NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LM
Sbjct: 571 KDTIGSFGENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R+E I+ ++ +++ LDI
Sbjct: 631 GDKVAPRREFIETHSSKLDMATLDI 655
>gi|443318324|ref|ZP_21047579.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
gi|442782062|gb|ELR92147.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
Length = 646
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/627 (60%), Positives = 488/627 (77%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DNAVDEA AGY S+IEV L A+ SVSV+D+GRGIP D+HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNAVDEALAGYCSHIEVTLNANGSVSVSDDGRGIPTDIHPR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ ++ Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREQRKHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V+ +P D+ R+GT + F PD +FTT +F++ TI+ R+RELA+LN
Sbjct: 143 RFERG--VSMGDLQSVP-DNSGRRGTLVSFSPDATIFTTGTEFEYGTISNRLRELAYLNA 199
Query: 181 KLTIA---LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ + LR + ++ + +++ GG+ EYV ++N DK+PLH D++ + + DG+ +
Sbjct: 200 GVDVTFTDLRLDVLKSDQPLVSRFYYEGGIREYVAYINNDKQPLHEDIIHVQSEKDGVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ ALQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN+L +K KD + +LS
Sbjct: 260 EAALQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNTLARKRSKRKDGESNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +V+ + E LTEYL+ HP++ D+I
Sbjct: 320 GENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVESVIGETLTEYLDFHPNIGDAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKILN+E+ D+A +YKN E+Q LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRKFQAILPLRGKILNIEKTDDAKIYKNTEVQALITALGLGIKGEEFDVSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I ++TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYK+ERG+ YCY D E
Sbjct: 500 RICLMTDADVDGAHIRTLLLTFFYRYQRALIDQGYVYIACPPLYKIERGRNHWYCYSDRE 559
Query: 537 LKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+ +++ FP+NA Y+ QRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+
Sbjct: 560 RDQLIQNEFPANANYTTQRFKGLGEMMPTQLWETTMNPESRTLKKVEIEDAAEADRIFTV 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +NL+ LDI
Sbjct: 620 LMGDRVAPRREFIEKYGPRLNLEDLDI 646
>gi|254526641|ref|ZP_05138693.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
gi|221538065|gb|EEE40518.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
Length = 655
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/625 (58%), Positives = 480/625 (76%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +IE+ L AD S ++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIILRADGSALISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G L + ++GT I F PDK +F+ I+F++ ++ R+RELA+LN
Sbjct: 152 RFEKGLSKGELQTKK-QIGKSSKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I R E + + E Y + GG++EYV+++N +K+ +H +++ + + ++
Sbjct: 211 GVKIVFRDERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKESIHPEIIYVDSQRENVYVE 270
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQWCSD YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+G
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL
Sbjct: 331 ENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLIL 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+
Sbjct: 451 KQGRDRNFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQL 570
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K F NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LM
Sbjct: 571 KNTIEGFGENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R+E I+ ++ +++ LDI
Sbjct: 631 GDKVAPRREFIETHSSNLDMASLDI 655
>gi|172035674|ref|YP_001802175.1| DNA gyrase subunit B [Cyanothece sp. ATCC 51142]
gi|354554914|ref|ZP_08974217.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
gi|171697128|gb|ACB50109.1| DNA gyrase B subunit [Cyanothece sp. ATCC 51142]
gi|353553068|gb|EHC22461.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
Length = 642
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/623 (60%), Positives = 481/623 (77%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + D SV+V D+GRGIP D+HP+
Sbjct: 27 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINPDGSVTVTDDGRGIPTDIHPS 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q
Sbjct: 87 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVIVKVWRDDEVHTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+T L D GT I F PDK++FT I+FD++T+AGR+RELA+LN
Sbjct: 145 RYERGIPITNLETKP---DKNHSTGTSISFLPDKKIFTVGIEFDYSTLAGRLRELAYLNA 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D+ E+ Y + GG++EYV ++ DK PLH D++ + +G +++A
Sbjct: 202 GVRITF--TDNRKEEPHVESYCYEGGIKEYVTYMCRDKDPLHQDIIFVSGEKNGTQVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +KD D +L GE+
Sbjct: 260 LLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKDNDANLGGEN 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYLE +P V DSI+ K
Sbjct: 320 VREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFNPHVADSIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+ PEESEIF+VEGDSAGGSAKQ
Sbjct: 380 AVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRDPEESEIFLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I+
Sbjct: 440 GRDRRFQAILPLRGKIINIEKTDDARIYKNNEIQSLITALGLGIKGEEFDPAQLRYHRIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYKVERG+ YCY++ +L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYQRALVDQGYVYIACPPLYKVERGRNHVYCYNERQLQE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S P+NA YSIQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG
Sbjct: 560 HINSLPANANYSIQRFKGLGEMMPTQLWDTTMNPETRRMKQVEIEDAAEADRIFTILMGD 619
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ ++L+ LDI
Sbjct: 620 RVAPRREFIETYGPKLDLNDLDI 642
>gi|157414241|ref|YP_001485107.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9215]
gi|157388816|gb|ABV51521.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9215]
Length = 655
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/625 (58%), Positives = 479/625 (76%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +IE+ L AD S ++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIVLRADGSALISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G L + ++GT I F PDK +F+ I+F++ ++ R+RELA+LN
Sbjct: 152 RFEKGLSKGELQTKK-QIGKSSKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I R E + + E Y + GG++EYV+++N +K +H +++ + + ++
Sbjct: 211 GVKIVFRDERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKDSIHPEIIYVDSQRENVYVE 270
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQWCSD YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+G
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL
Sbjct: 331 ENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLIL 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+
Sbjct: 451 KQGRDRNFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQL 570
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K F NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LM
Sbjct: 571 KNTIEGFGENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R+E I+ ++ +++ LDI
Sbjct: 631 GDKVAPRREFIETHSSNLDMASLDI 655
>gi|126660369|ref|ZP_01731481.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
gi|126618342|gb|EAZ89099.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
Length = 642
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/623 (60%), Positives = 481/623 (77%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ + D SV+V D+GRGIP D+HP+
Sbjct: 27 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDINPDGSVTVTDDGRGIPTDVHPS 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q
Sbjct: 87 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVIVKVWRDDQVHTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+T+L D GT I F PDK +FT +FD++T+AGR+RELA+LN
Sbjct: 145 RYERGVPITSLETKA---DKDHSTGTSISFLPDKTIFTVGTEFDYSTLAGRLRELAYLNA 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D+ E+ Y + GG++EYV ++ DK PLH D++ + +G +++A
Sbjct: 202 GVKITF--TDNRKEEPHIESYCYEGGIKEYVTYMCRDKDPLHQDIIFVSGEKNGTQVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +KD D +L GE+
Sbjct: 260 LLWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKDNDSNLGGEN 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L+EYLE +P V DSI+ K
Sbjct: 320 VREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFNPHVADSIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS+ PEESEIF+VEGDSAGGSAKQ
Sbjct: 380 AVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSTRDPEESEIFLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I+
Sbjct: 440 GRDRRFQAILPLRGKIINIEKTDDARIYKNNEIQSLITALGLGIKGEEFDSSQLRYHRIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ++L D+G +Y+ PPLYKVERG+ YCY++ +L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIACPPLYKVERGRNHVYCYNERQLQE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S P+NA YSIQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG
Sbjct: 560 HINSLPANANYSIQRFKGLGEMMPTQLWDTTMNPETRRMKQVEIEDAAEADRIFTILMGD 619
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ ++L+ LDI
Sbjct: 620 RVAPRREFIETYGPKLDLNDLDI 642
>gi|428203405|ref|YP_007081994.1| DNA gyrase subunit B [Pleurocapsa sp. PCC 7327]
gi|427980837|gb|AFY78437.1| DNA gyrase, B subunit [Pleurocapsa sp. PCC 7327]
Length = 642
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/624 (60%), Positives = 478/624 (76%), Gaps = 10/624 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IEV + +D SV+V DNGRGIP D HP
Sbjct: 27 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINSDGSVTVTDNGRGIPTDTHPT 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE ++VTVWRD + Q
Sbjct: 87 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVKVTVWRDNKVHTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + + ++R GT I F PD Q+FT I+FD++T+AGR++ELA+LN
Sbjct: 145 RYERGIPVTELE---IKPEKEERTGTSITFLPDLQIFTGGIEFDYSTLAGRLKELAYLNA 201
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I K S+P Y + GG++EYV ++ +K+PLH D++ + +GI +++
Sbjct: 202 GVKITFSDKRGSEP---HVETYCYEGGIKEYVAYMCREKQPLHQDIIYVSGEKNGIQLEV 258
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRTLN++ +K +KD + +L+GE
Sbjct: 259 AMQWCVDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTLNNVARKRNKIKDNEPNLAGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD E L EYLE HP V D+I+
Sbjct: 319 NVREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSIAGEALNEYLEFHPQVADAIIE 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCSS P ESEIF+VEGDSAGGSAK
Sbjct: 379 KAVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPSESEIFLVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I
Sbjct: 439 QGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDASQLRYHRI 498
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDAD DG HIRTLLLTFFYRYQ+ L D G IY+ PPLYK+ERG+ YCY D E
Sbjct: 499 VIMTDADSDGGHIRTLLLTFFYRYQRELVDRGFIYIACPPLYKIERGRNHYYCYSDREKA 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ + + LMG
Sbjct: 559 QIINQFPANANYTIQRFKGLGEMMPDQLWETTMNPETRTLKRVEIEDAAEADRICTVLMG 618
Query: 599 ARVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + + LDI
Sbjct: 619 DRVAPRREFIETHGSRLEFTDLDI 642
>gi|411117920|ref|ZP_11390301.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
gi|410711644|gb|EKQ69150.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
Length = 645
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/626 (61%), Positives = 479/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY NI+V L + SV+V D+GRGIP +H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKNIDVTLNDNGSVTVVDDGRGIPTGIHSR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLT L AGGKFG Y VSGGLHGVG+SVVNALSE +EVTVWRDG + Q
Sbjct: 85 TGKSALETVLTKLGAGGKFGEGGG-YKVSGGLHGVGISVVNALSEWVEVTVWRDGKIHTQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P + + DR GT + F PD +FT I FD+ T+AGR+RELAFLN
Sbjct: 144 RFERGIPKGDMQVES---GAGDRTGTSVTFLPDSTIFTGGIVFDYATLAGRLRELAFLNG 200
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R++ + + + YF+ GG+ EYV ++N +K+PLH+ ++ + + + + +
Sbjct: 201 GVRITFTDNRRDSPESGEPRTETYFYEGGIREYVTYMNREKQPLHEEIIYIQGERNNVQV 260
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQW +DAY+D +LG+AN+IRTIDGGTH+EG+K LTRTLNSL +K +KD D L+
Sbjct: 261 EVALQWSADAYTDNLLGFANNIRTIDGGTHLEGLKTVLTRTLNSLARKRNKLKDDD-KLA 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V D+I
Sbjct: 320 GENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPSVADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +AA AA++AR+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 IEKALEAFRAAEAARKARELVRRKSVLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F+ LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFEPSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ + D+G +Y+ PPLYK+ERG+ YCY D E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRAMVDQGFVYIACPPLYKIERGRNHYYCYSDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ SSFP NA Y IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ F+ L
Sbjct: 560 RDQITSSFPENAKYEIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAEADRTFTVL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETHGSKLNLTDLDI 645
>gi|255073667|ref|XP_002500508.1| predicted protein [Micromonas sp. RCC299]
gi|226515771|gb|ACO61766.1| predicted protein [Micromonas sp. RCC299]
Length = 703
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/621 (61%), Positives = 472/621 (76%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHH+V+E+LDN VDE QAG+AS I V + AD SV+V D+GRGIP D+HPA
Sbjct: 75 MYIGNTSTKGLHHMVWEVLDNGVDEVQAGHASLITVTVEADGSVAVEDDGRGIPTDVHPA 134
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S+LETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALS+S EVTVWR EY Q
Sbjct: 135 TGTSSLETVLTVLHAGGKFGGDESGYHVSGGLHGVGISVVNALSDSTEVTVWRGDREYRQ 194
Query: 121 KYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+SRG P+T + V V K +GTR+RF PD +F FD N I R++ELAF
Sbjct: 195 SFSRGAALAPMTEGSQDVANVGKK--KGTRVRFKPDPSIFKERQDFDPNIILARMKELAF 252
Query: 178 LNPKLTIALRKEDSDPEKNQ--YNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI 234
LN T ++ D +K + Y E F GGL++YV LN +PLH+ + FR +VDG+
Sbjct: 253 LNSTATDEASMDEGDVKKTEEYYEEVLSFPGGLKDYVVDLNEGAEPLHEPITFRAEVDGV 312
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
++ ALQW +AY+DT+LGYANSIRT DGGTH++G+K SLTR +N+ +K+K +K+ D +
Sbjct: 313 QVEGALQWTKEAYTDTLLGYANSIRTSDGGTHLDGLKQSLTRAVNTQARKAKLLKEADAN 372
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L GEH+REGL+ +I+V VP PEFEGQTKTRLGNPEVRKVV+ + E ++E+LE +P+ L
Sbjct: 373 LGGEHIREGLSAVIAVWVPQPEFEGQTKTRLGNPEVRKVVESVIGEQVSEHLEFYPNTLG 432
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
SI SK+ A KAA AAKRAR+LVR+KSVLRS SLPGKL+DCS + PE +EIF+VEGDSAG
Sbjct: 433 SIFSKASQAQKAAEAAKRARELVRRKSVLRSGSLPGKLSDCSVSDPESTEIFLVEGDSAG 492
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDRRFQA+LPLRGKILNVERKDEA+MYKN EI +++ ALGLG+KGE F + LR
Sbjct: 493 GSAKQGRDRRFQAVLPLRGKILNVERKDEASMYKNTEISSMVTALGLGLKGEPFDESQLR 552
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ----- 529
Y KI+ILTDADVDGAHIRTLLLTF +RYQ+ LF++G +YV VPPLYKVE G+ +
Sbjct: 553 YSKIVILTDADVDGAHIRTLLLTFLFRYQRGLFEQGKVYVAVPPLYKVESGRAGKNNPPT 612
Query: 530 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
YCYD+A+L+ ++ P A SIQRFKGLGEMMP QLW TTLNPE R+LK+L ++DAA A
Sbjct: 613 YCYDEAQLQAHLATLPEGASRSIQRFKGLGEMMPEQLWSTTLNPETRLLKRLTVDDAAMA 672
Query: 590 NVVFSSLMGARVDTRKELIQN 610
N F LM +V R+E I+
Sbjct: 673 NKTFQLLMSDKVAPRREFIET 693
>gi|123969376|ref|YP_001010234.1| DNA gyrase subunit B [Prochlorococcus marinus str. AS9601]
gi|123199486|gb|ABM71127.1| DNA gyrase, subunit B [Prochlorococcus marinus str. AS9601]
Length = 655
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/625 (58%), Positives = 478/625 (76%), Gaps = 6/625 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ +IE+ L AD S ++DNGRGIP D+HP
Sbjct: 34 MYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDHIEIVLRADGSAFISDNGRGIPTDIHPR 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q
Sbjct: 94 TGKSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G L ++GT I F PDK +F+ I+F++ ++ R+RELA+LN
Sbjct: 152 RFEKGVSKGELQAKK-QTGKPFKKGTSICFKPDKTIFSGGIEFEYALLSSRLRELAYLNG 210
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I R E + + E Y + GG++EYV+++N +K +H +++ + + ++
Sbjct: 211 GVKIVFRDERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKDSIHPEIIYVDSQKENVYVE 270
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQWCSD YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+G
Sbjct: 271 AALQWCSDVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E++REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL
Sbjct: 331 ENIREGLTVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPAILDLIL 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ + AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSA
Sbjct: 391 EKAIQSFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F + +LRYH+
Sbjct: 451 KQGRDRNFQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDESSLRYHR 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
++I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +L
Sbjct: 511 VVIMTDADVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQL 570
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K F NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LM
Sbjct: 571 KDTIQGFGENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILM 630
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R+E I+ + +++ LDI
Sbjct: 631 GDKVAPRREFIETHSGNLDMATLDI 655
>gi|428301860|ref|YP_007140166.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
gi|428238404|gb|AFZ04194.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
Length = 645
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/626 (60%), Positives = 478/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++++V L D S V D+GRGIP+D H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVDVELNPDGSCGVKDDGRGIPVDTHTK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVL AGGKFGG S Y VSGGLHGVG+SVVN LSE L+VT+WRD Y Q
Sbjct: 85 TGKSALETVLTVLGAGGKFGGGS--YKVSGGLHGVGVSVVNGLSEWLDVTIWRDKKVYTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L + R GT I+F PD +FTT +FD+ T++ R+RELA+LN
Sbjct: 143 RYERGVAQAELKNQPY---KEARTGTAIKFKPDDTIFTTGTEFDYTTLSSRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG+ EYV ++N DK+ H+ ++ + + + +
Sbjct: 200 GVRITFADNRLELLKSDTPRLETYEYKGGIREYVAYMNADKQAQHEEIIYVQGERHNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWCSDAYSD +LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +K+ + +LS
Sbjct: 260 EVALQWCSDAYSDNVLGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKENESNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDTLVGEVLTEYLEFHPGVADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEI++VEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPAESEIYLVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLGV+G++F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNNEIQSLITALGLGVRGDEFDATQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYK+ERG+ QYCY D E
Sbjct: 500 RIVIMTDADVDGAHIRTLLLTFFYRYQRALVEQGYIYIACPPLYKLERGRNHQYCYSDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ S FP NA Y+IQRFKGLGEMMP QLW+TT+NPE+R LK++ IEDAAEA+ +F+ L
Sbjct: 560 LQQKISEFPDNANYTIQRFKGLGEMMPQQLWDTTMNPERRTLKRVEIEDAAEADRIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +N+ LDI
Sbjct: 620 MGDRVAPRREFIETYGSKLNMLDLDI 645
>gi|428224467|ref|YP_007108564.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
gi|427984368|gb|AFY65512.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
Length = 646
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/629 (60%), Positives = 482/629 (76%), Gaps = 14/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY I+V L AD SVSV D+GRGIP D+HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCHQIQVTLNADGSVSVTDDGRGIPTDVHPR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD +
Sbjct: 85 TGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDRKVFKH 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ ++ P + R GT + F PD Q+FT I+FD+ +A R+RELA+LN
Sbjct: 143 RFERGVPIGEMSSEPYP---EARTGTSLTFMPDVQIFTGGIEFDYAILASRLRELAYLNG 199
Query: 181 KLTIALRKEDSDPEKNQYNE-----YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGI 234
+ I+ DS E + NE Y + GG++EY+ +LN DK+P+H+ V+ + + +G+
Sbjct: 200 GVYISF--TDSRLELLKSNEPKVEVYHYEGGIQEYIAYLNRDKQPIHEEVIYVQGEREGV 257
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
++++LQWC DA++D +LG+AN+IRT+DGGTH+EG+KA LTRT+NS+ +K +K+ + +
Sbjct: 258 QLEVSLQWCVDAFTDNLLGFANNIRTVDGGTHLEGLKAVLTRTMNSIARKRNRLKENESN 317
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L GEH+REGLT +ISV+VP+PEFEGQTKT+LGN EVR +V+ V E LTEYL P V D
Sbjct: 318 LGGEHIREGLTGVISVKVPDPEFEGQTKTKLGNMEVRGIVESFVGEVLTEYLNFRPGVAD 377
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+IL K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS ESEIFIVEGDSAG
Sbjct: 378 AILEKAIQAYNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDASESEIFIVEGDSAG 437
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF LR
Sbjct: 438 GSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDSSQLR 497
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YH+I+I+TDADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYKVERG+ YCY D
Sbjct: 498 YHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVEQGYIYIACPPLYKVERGRSHYYCYSD 557
Query: 535 AELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
EL+ ++ FP NA Y+IQRFKGLGEMMP QLWETT+NPE R LKQ+ IEDAAEA+ +F
Sbjct: 558 RELQGLIQREFPPNASYTIQRFKGLGEMMPTQLWETTMNPETRTLKQVEIEDAAEADRIF 617
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
+ LMG RV R+E I+ + +NL LDI
Sbjct: 618 TILMGDRVAPRREFIETYGSRLNLADLDI 646
>gi|220908378|ref|YP_002483689.1| DNA gyrase subunit B [Cyanothece sp. PCC 7425]
gi|219864989|gb|ACL45328.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7425]
Length = 645
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/626 (61%), Positives = 473/626 (75%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY NI V L D SV+V D+GRGIP D+
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKNILVELNPDGSVTVTDDGRGIPTDIVSK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG S LHGVG+SVVNALS LE VWRDG + Q
Sbjct: 85 TGKSALETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSWLEAKVWRDGKVFTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P T L +R GT I+F PD ++FT I+FD+ T++GR+RELA+LN
Sbjct: 143 RFERGLPATDLKAQP---SGGNRTGTAIQFMPDAEIFTETIEFDYKTLSGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R D K YF+ GG++EYV ++N DK+PLH +++ + + + + +
Sbjct: 200 GVKIEFRDGRLDLLKRDEPLLETYFYEGGIKEYVSYMNVDKEPLHQEIIYVQGERNDVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC+DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN+ +K +K+ D +L+
Sbjct: 260 EVALQWCTDAYTDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNNFARKRNKLKEGDPNLA 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE+VREG+T +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYL+ P V+DSI
Sbjct: 320 GENVREGMTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFRPAVVDSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P E+EIFIVEGDSAGGS
Sbjct: 380 LEKAIQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPREAEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDASNLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII +TDADVDGAHIRTLLLTFFYRYQ+ L D+G IYV PPLYK+ERG+ YCY+D E
Sbjct: 500 KIIAMTDADVDGAHIRTLLLTFFYRYQRQLVDQGYIYVACPPLYKIERGRNHYYCYNDRE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + NA Y IQRFKGLGEMMP QLW+TT+NPE R LKQ+ IEDAAEA+ +F+ L
Sbjct: 560 RDQIIAGLGENARYEIQRFKGLGEMMPQQLWDTTMNPETRTLKQVTIEDAAEADRIFNIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGPRLNLADLDI 645
>gi|428222103|ref|YP_007106273.1| DNA gyrase subunit B [Synechococcus sp. PCC 7502]
gi|427995443|gb|AFY74138.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7502]
Length = 646
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/623 (60%), Positives = 479/623 (76%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+E++DN+VDEA GY IE+ LL D SVSV DNGRGIP D+HP
Sbjct: 31 MYIGSTGPKGLHHLVFEVVDNSVDEALGGYCDRIEIELLPDGSVSVTDNGRGIPTDIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EV+VWR Y Q
Sbjct: 91 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVSVWRQDQIYTQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P+ LT + D+ R+GT++RF PD Q+F T FD T+AGR++ELA+LN
Sbjct: 149 RFERGFPIGILTG--VKTDNP-RRGTQVRFKPDAQIFLTETTFDFTTLAGRLKELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D E+ + Y + GG+ EYV ++ +K+ +H D++ + D + +++A
Sbjct: 206 GVYIQF--SDRRGEEPRSEVYQYEGGIREYVTYMTREKEAIHNDIIYVNGERDHVQVEVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWCSDAY+D +LG+AN+IRTIDGGTH+EG+K LTRT+N+ +K K +K+ D +L+GE+
Sbjct: 264 LQWCSDAYNDNILGFANNIRTIDGGTHLEGLKTVLTRTINANARKLKKLKEGDSNLAGEN 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP+PEFEGQTKT+LGNPEVR +VD V E L+EYLE HP + SI+ K
Sbjct: 324 VREGLTAVISVKVPDPEFEGQTKTKLGNPEVRGIVDSFVGEVLSEYLEFHPAIAASIIDK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ + AA AA+RAR+LVR+KS L SS+LPGKLADCSS P ESE+FIVEGDSAGGSAKQ
Sbjct: 384 AVQSFNAAEAARRARELVRRKSALESSTLPGKLADCSSRDPRESEVFIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LN+E+ +++ +YKN EIQ LI LG+G++GE+F LRYHKII
Sbjct: 444 GRDRHFQAILPLRGKVLNIEKAEDSKIYKNAEIQALITGLGMGIRGEEFNLAQLRYHKII 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+L DADVDGAHIRTLLLTFFYRYQ+ L D+G IY+G PPLYKVERGK +QYCY D EL+
Sbjct: 504 LLADADVDGAHIRTLLLTFFYRYQRQLVDQGYIYIGCPPLYKVERGKSMQYCYSDRELQA 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++FP+NA Y+IQRFKGLGEMMP+QLW+TT+NP R LKQ+ IEDAAEA+ +F+ LMG
Sbjct: 564 HLATFPANANYNIQRFKGLGEMMPIQLWDTTMNPATRTLKQITIEDAAEADRIFTILMGD 623
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + +NL LDI
Sbjct: 624 RVAPRREFIETYGSKLNLTDLDI 646
>gi|209525244|ref|ZP_03273786.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|423065151|ref|ZP_17053941.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
gi|209494259|gb|EDZ94572.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|406713283|gb|EKD08454.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
Length = 645
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/627 (61%), Positives = 488/627 (77%), Gaps = 11/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV + DNSV V D+GRGIPID H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEVEINPDNSVRVTDDGRGIPIDTHSK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTV RD Y Q
Sbjct: 85 TGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVLRDHKRYVQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+Y RG PVT + H SK+ Q GT + F PD ++FTT I+F+++TIA R+RELA+LN
Sbjct: 143 RYERGVPVTEVKEH----SSKETQTGTSVCFKPDTKIFTTGIEFEYDTIASRLRELAYLN 198
Query: 180 PKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I L R E E+ + Y + GG++EYV ++N +K+ LH D + + + +
Sbjct: 199 AGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVTYMNREKQALHEDTIYVSGERNNVQ 258
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +KD + +L
Sbjct: 259 VEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKDNEPNL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTE+L+ +P+V D+
Sbjct: 319 GGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEFLDFNPNVADA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGG
Sbjct: 379 ILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRY
Sbjct: 439 SAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPSQLRY 498
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYKVERG+ YCY++
Sbjct: 499 HKVIIMTDADVDGAHIRTLLLTFFYRYQRELVDQGFIYIACPPLYKVERGRNHYYCYNEQ 558
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L++ + FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R +K++ IEDAAEA+ +F+
Sbjct: 559 QLQQQLAEFPDNANYTIQRFKGLGEMMPNQLWDTTMNPETRSIKRVEIEDAAEADHIFTV 618
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R++ I++ A +++ LDI
Sbjct: 619 LMGDRVAPRRQFIEDHAPRLDITDLDI 645
>gi|409993293|ref|ZP_11276439.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
gi|291569892|dbj|BAI92164.1| DNA gyrase B subunit [Arthrospira platensis NIES-39]
gi|409935828|gb|EKN77346.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
Length = 645
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/627 (61%), Positives = 487/627 (77%), Gaps = 11/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV + DNSV V D+GRGIPID H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEVDINPDNSVRVTDDGRGIPIDTHSK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTV RD Y Q
Sbjct: 85 TGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVLRDHKRYVQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+Y RG PVT L H SK+ Q GT + F PD ++FTT I+F+++TIA R+RELA+LN
Sbjct: 143 RYERGVPVTELEEH----SSKESQTGTSVCFKPDTKIFTTGIEFEYDTIASRLRELAYLN 198
Query: 180 PKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I L R E E+ + Y + GG++EYV ++N +K+ LH D + + + +
Sbjct: 199 AGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVTYMNREKQALHEDTIYVSGERNNVQ 258
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +KD + +L
Sbjct: 259 VEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKDNEPNL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTE+L+ +P+V D+
Sbjct: 319 GGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEFLDFNPNVADA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGG
Sbjct: 379 ILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRY
Sbjct: 439 SAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSSQLRY 498
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+TDADVDGAHIRTLLLTFFYRYQ+ L +G IY+ PPLYKVERG+ YCY++
Sbjct: 499 HKVIIMTDADVDGAHIRTLLLTFFYRYQRELVAQGFIYIACPPLYKVERGRNHYYCYNEQ 558
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L++ + FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R +K++ IEDAAEA+ +F+
Sbjct: 559 QLQQQLAEFPDNANYTIQRFKGLGEMMPNQLWDTTMNPETRSIKRVEIEDAAEADHIFTV 618
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R++ I++ A +++ LDI
Sbjct: 619 LMGDRVAPRRQFIEDHAPRLDITDLDI 645
>gi|376006244|ref|ZP_09783547.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
gi|375325373|emb|CCE19300.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
Length = 645
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/627 (61%), Positives = 487/627 (77%), Gaps = 11/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY ++IEV + DNSV V D+GRGIPID H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCTHIEVEINPDNSVRVTDDGRGIPIDTHSK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTV RD Y Q
Sbjct: 85 TGRSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVLRDHKRYVQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+Y RG PVT L H SK+ Q GT + F PD ++FTT I+F+++TIA R+RELA+LN
Sbjct: 143 RYERGVPVTELEEH----SSKETQTGTSVCFKPDTKIFTTGIEFEYDTIASRLRELAYLN 198
Query: 180 PKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGIT 235
+ I L R E E+ + Y + GG++EYV ++N +K+ LH D + + + +
Sbjct: 199 AGVRITLTDNRLELLKREEAKVESYCYEGGIKEYVTYMNREKQALHEDTIYVSGERNNVQ 258
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++ALQWC DAYSDT+LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +KD + +L
Sbjct: 259 VEVALQWCVDAYSDTILGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKDNEPNL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTE+L+ +P+V D+
Sbjct: 319 GGENVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEFLDFNPNVADA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGG
Sbjct: 379 ILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRY
Sbjct: 439 SAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPSQLRY 498
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+TDADVDGAHIRTLLLTFFYRYQ+ L +G IY+ PPLYKVERG+ YCY++
Sbjct: 499 HKVIIMTDADVDGAHIRTLLLTFFYRYQRELVAQGFIYIACPPLYKVERGRNHYYCYNEQ 558
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+L++ + FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R +K++ IEDAAEA+ +F+
Sbjct: 559 QLQQQLAEFPDNANYTIQRFKGLGEMMPNQLWDTTMNPETRSIKRVEIEDAAEADHIFTV 618
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R++ I++ A +++ LDI
Sbjct: 619 LMGDRVAPRRQFIEDHAPRLDITDLDI 645
>gi|428205380|ref|YP_007089733.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
gi|428007301|gb|AFY85864.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
Length = 645
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/626 (60%), Positives = 476/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AGY ++IE+ L AD SV V D+GRGIP D HP
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGYCTHIEIDLNADGSVQVVDDGRGIPTDTHPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+ L + + GT +RF PD ++FT +FD+ T+AGR+RELA+LN
Sbjct: 143 RYERGVPMGELQTKSF---KEAKTGTGVRFKPDAEIFTVGTEFDYITLAGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITI 236
+ I R E ++ + Y + GG+ EYV ++N DK+ LH+ + F + + + + +
Sbjct: 200 GVRITFTDHRLELLKSQEPKVETYEYKGGIREYVSYINNDKQALHEEIIFVQGERNNVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC+DAY+D +LG+AN+IRT+DGGTH+EG+K LTRTLN++ +K +KD + +LS
Sbjct: 260 EVALQWCTDAYTDNLLGFANNIRTVDGGTHLEGLKTVLTRTLNAIARKRNKIKDNEPNLS 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GEHVREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P + DSI
Sbjct: 320 GEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPSIADSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRR QAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYH
Sbjct: 440 AKQGRDRRNQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDSSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KI+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+K+ERG+ YCY + E
Sbjct: 500 KIVIMTDADVDGAHIRTLLLTFFYRYQRQLIEQGFIYIACPPLFKIERGRNHYYCYSERE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ + FP+NA Y+IQRFKGLGEMMP QLW+TT+N E R LK++ IEDAAEA+ +F+ L
Sbjct: 560 RDQKIAEFPANANYTIQRFKGLGEMMPQQLWDTTMNNETRTLKRVEIEDAAEADRIFTVL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ + +NL LDI
Sbjct: 620 MGDRVAPRREFIETYGSRLNLVELDI 645
>gi|443326004|ref|ZP_21054673.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
gi|442794385|gb|ELS03803.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
Length = 644
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/623 (59%), Positives = 488/623 (78%), Gaps = 4/623 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG+ ++IE+ + ++ ++ V D+GRGIP+ +H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGHCTHIEIDITSEGAIKVTDDGRGIPVGIHSK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGGS SGY VSGGLHGVG+SVVNALSE +EVTVWRDG + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGSGSGYKVSGGLHGVGVSVVNALSEWVEVTVWRDGDIHLQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GK L D+ + GT + F+PD +FT I+F++N +AGR++ELA+LN
Sbjct: 145 RYEKGKAQGVLQSSP-NADNPTQTGTSVHFFPDATIFTDTIEFEYNVLAGRLKELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I ++ + E Q Y + GG++EYV ++ +K+ LH D++ ++ +G+T+++A
Sbjct: 204 GVKITF-TDNREAEPRQ-ELYCYEGGIKEYVAYMTREKQALHEDILYVAEEKNGVTVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N+ +K +KD D +L GE+
Sbjct: 262 LQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNFARKRNKLKDSDKNLGGEN 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L +YLE + V D+I+ K
Sbjct: 322 IREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLKDYLEFNLGVGDAIIEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+ AR+LVR+KSVL S++LPGKLADCSS P ESEI++VEGDSAGGSAKQ
Sbjct: 382 AVQAFKAAEAARHARELVRRKSVLESTTLPGKLADCSSRDPAESEIYLVEGDSAGGSAKQ 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ++I ALGLG+KGE+F E LRYH+I+
Sbjct: 442 GRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSMITALGLGIKGEEFNPEQLRYHRIV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRYQ+ + D+G +Y+ PPLYK+ERG+ YCY D +L++
Sbjct: 502 IMTDADVDGAHIRTLLLTFFYRYQREMVDQGYVYIACPPLYKLERGRNHYYCYSDRDLQQ 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P+NA Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDAAEA+ +F+ LMG
Sbjct: 562 KIAELPANANYTIQRFKGLGEMMPQQLWDTTMNPETRMMKRVEIEDAAEADRIFTVLMGD 621
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ A +NL LDI
Sbjct: 622 RVAPRREFIETNAPKLNLMDLDI 644
>gi|427418615|ref|ZP_18908798.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
gi|425761328|gb|EKV02181.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
Length = 645
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/626 (58%), Positives = 482/626 (76%), Gaps = 9/626 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY I + L AD SV+V D+GRGIP D+H
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCKTITIDLNADGSVTVTDDGRGIPTDVHAR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ E+ Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRNKKEHLQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+ L+ + + + GT + F PD+ +FT ++FD++T+AGR+RELA+LN
Sbjct: 143 RYERGEAQGELS---VKSGADSQTGTSVSFKPDQLIFTETVEFDYSTLAGRLRELAYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R E ++ + N YF+ GG+ EYV+++N +K+P+H D++ + +G+ +
Sbjct: 200 GVDITFTDHRLELLKADEPKINRYFYEGGIREYVEYINKEKQPIHPDIIYVTGEKNGVQV 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ ALQW DAYSD ++G+AN+IRT+DGGTH+EG+KA LTRT+N+ +K KD + +L+
Sbjct: 260 EAALQWSVDAYSDNLMGFANNIRTVDGGTHLEGLKAVLTRTMNNFARKRNKRKDNEPNLA 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE++REGLT +ISV+VP PEFEGQTKT+LGN EVR +VD + E L+EYL+ +P+V+DSI
Sbjct: 320 GENIREGLTAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLIGETLSEYLDFNPNVVDSI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ + AA AA+RARDLVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGS
Sbjct: 380 LEKAIQSFNAAEAARRARDLVRRKSVLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILN+E+ D++ +YKN E+Q+LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRRFQAILPLRGKILNIEKTDDSKIYKNNEVQSLITALGLGIKGEEFDSSQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I ++TDADVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYK+ERG+ YCY + E
Sbjct: 500 RICLMTDADVDGAHIRTLLLTFFYRYQRALIDQGFVYIACPPLYKLERGRSHTYCYSEQE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ S+ P+NA Y++QRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA +F+ L
Sbjct: 560 LQRGISALPANAKYNVQRFKGLGEMMPTQLWDTTMNPESRTLKKVEIEDAAEAERIFTVL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG RV R+E I+ +N+ LDI
Sbjct: 620 MGDRVAPRREFIETYGPKLNMADLDI 645
>gi|307154719|ref|YP_003890103.1| DNA gyrase subunit B [Cyanothece sp. PCC 7822]
gi|306984947|gb|ADN16828.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7822]
Length = 640
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/623 (60%), Positives = 478/623 (76%), Gaps = 8/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AGY ++IEV + D SV+V D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHIEVDINPDGSVTVTDDGRGIPTDTHPT 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE + VTVWRD + Q
Sbjct: 85 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVNVTVWRDQKRFTQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT+L ++ GT + F PD Q+F+ I+FD++T+AGR+RELA+LN
Sbjct: 143 RYERGIPVTSLESQP---ETDHSTGTSVSFLPDTQIFSDGIEFDYSTLAGRLRELAYLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I D E+ + Y + GG++EYV ++ +K+PLH+ ++ + + +GI I++A
Sbjct: 200 GVRITF--SDKRLEQPRVESYCYEGGIKEYVAYMCREKQPLHEEIIYVQGERNGIQIEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQW D Y+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+
Sbjct: 258 LQWYIDTYNDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGEN 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE HP + DSI+ K
Sbjct: 318 VREGLTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLGEYLEFHPQIADSIIEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KAA AA+RAR+LVR+KSVL SS LPGKLADCS P +SEIFIVEGDSAGGSAKQ
Sbjct: 378 AVQAFKAAEAARRARELVRRKSVLESSPLPGKLADCSERDPAKSEIFIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRR QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+II
Sbjct: 438 GRDRRSQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDAAQLRYHRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD DG+HIRTLLLTFFYRYQ+++ D+G IY+ PPLYKVERGK +YCY++ EL++
Sbjct: 498 IMTDADYDGSHIRTLLLTFFYRYQRSIVDQGYIYIACPPLYKVERGKNHRYCYNERELQQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
S P NA YSIQRFKGLGEMMP QLWETT+NPE R+LKQ+ IEDAA+A +F+ LMG
Sbjct: 558 YISELPPNANYSIQRFKGLGEMMPQQLWETTMNPETRLLKQVEIEDAAKAEELFTILMGD 617
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV R+E I+ + L LDI
Sbjct: 618 RVLPRREFIETHGPRLKLTDLDI 640
>gi|428315585|ref|YP_007113467.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
gi|428239265|gb|AFZ05051.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
Length = 646
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/630 (60%), Positives = 481/630 (76%), Gaps = 16/630 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+ L AD SV+V D+GRGIP +
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEIDLNADGSVTVTDDGRGIPTGIVAK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVW D E+ Q
Sbjct: 85 TGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWLDQKEHLQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L V P + R GT + F PD Q+FTT I+FD+ T+AGR+REL +LN
Sbjct: 143 RYERGNPVTEL--KVKP-NKGTRTGTSVSFLPDTQIFTTGIEFDYTTLAGRLRELGYLNA 199
Query: 181 KLTIALRK------EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDG 233
+ I + S+P Y + GG++EY+ ++N +K+PLHD V+ + + +
Sbjct: 200 GVRITFSDHRLALLKSSEP---HIETYCYEGGIKEYIAYMNREKQPLHDEVIYVQGERNN 256
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ I++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG+KA LTRT+NS+ +K +K+ +
Sbjct: 257 VQIEVALQWCVDAFSDNVLGFANNIRTIDGGTHLEGLKAVLTRTMNSIARKRNKIKENEP 316
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
+L+GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V
Sbjct: 317 NLAGENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPQVA 376
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS P SEI++VEGDSA
Sbjct: 377 DAILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPALSEIYLVEGDSA 436
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 473
GGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F L
Sbjct: 437 GGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPAQL 496
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH I+I+TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERG+ YCY
Sbjct: 497 RYHHIVIMTDADVDGAHIRTLLLTFFYRYQRALVEQGYIYIACPPLYKVERGRNHYYCYS 556
Query: 534 DAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D E+ V++ FP+NA Y++QRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +
Sbjct: 557 DREMNNLVRNEFPANANYTVQRFKGLGEMMPTQLWDTTMNPETRTLKRVEIEDAAEADRI 616
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F+ LMG RV R+E I+ +NL LDI
Sbjct: 617 FTILMGDRVAPRREFIETYGPKLNLLDLDI 646
>gi|300865369|ref|ZP_07110180.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
gi|300336672|emb|CBN55330.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
Length = 646
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/630 (59%), Positives = 488/630 (77%), Gaps = 16/630 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IEV + AD SV+V D+GRGIP +
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEVDINADGSVTVTDDGRGIPTGIVAK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD ++Q
Sbjct: 85 TGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHNQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PVT L V ++R GT + F PD Q+F+T I+FD+ ++GR+RELA+LN
Sbjct: 143 RFERGIPVTDL---VDKPSKENRSGTSVSFLPDTQIFSTGIEFDYTILSGRLRELAYLNA 199
Query: 181 --KLTIALRK----EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDG 233
K+T + R+ + S+P Y + GG++EY+ ++N DK+PLH+ V F + + +
Sbjct: 200 GVKITFSDRRLELLKSSEP---HIETYCYEGGIKEYIAYMNRDKQPLHEEVIFIQGERNN 256
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ ++++LQWC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N++ +K +K+ +
Sbjct: 257 VQVEVSLQWCIDAYSDNVLGFANNIRTIDGGTHLEGLKAVLTRTMNAIARKRNKIKENEP 316
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
+L GE++REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V
Sbjct: 317 NLGGENIREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPQVA 376
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
D+IL K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS P +SEI++VEGDSA
Sbjct: 377 DTILEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPSKSEIYLVEGDSA 436
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 473
GGSAKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG++G++F L
Sbjct: 437 GGSAKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIRGDEFDPSQL 496
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH I+I+TDADVDGAHIRTLLLTFFYRYQ++L D+G IY+ PPLYKVERG+ YCY
Sbjct: 497 RYHHIVIMTDADVDGAHIRTLLLTFFYRYQRSLVDQGYIYIACPPLYKVERGRNHFYCYS 556
Query: 534 DAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL+ +++ FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +
Sbjct: 557 DRELQNLIRNEFPANANYTIQRFKGLGEMMPQQLWETTMNPESRTLKRVEIEDAAEADRI 616
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F+ LMG RV R+E I+ +NL LDI
Sbjct: 617 FTILMGDRVAPRREFIETYGPKLNLTDLDI 646
>gi|334120265|ref|ZP_08494347.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
gi|333457053|gb|EGK85680.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
Length = 646
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/627 (59%), Positives = 479/627 (76%), Gaps = 10/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA AG+ ++IE+ + AD SV+V D+GRGIP +
Sbjct: 25 MYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEIDINADGSVTVTDDGRGIPTGIVAK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E+ Q
Sbjct: 85 TGKSGIETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDQKEHLQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + R GT + F PD Q+F+T I+FD+ +AGR+REL +LN
Sbjct: 143 RYERGFPVTELNAKP---NKGTRTGTSVSFLPDTQIFSTGIEFDYTILAGRLRELGYLNA 199
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I R E + + Y + GG++EY+ ++N +K+PLH+ V+ + + + + I
Sbjct: 200 GVRITFSDHRLELLKSSEPRIETYCYEGGIKEYIAYMNREKQPLHEEVIYVQGERNNVQI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQWC DA+SD +LG+AN+IRTIDGGTH+EG+KA LTRT+NS+ +K +K+ + +L+
Sbjct: 260 EVALQWCVDAFSDNVLGFANNIRTIDGGTHLEGLKAVLTRTMNSIARKRNKIKENEPNLA 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE+VREGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V D+I
Sbjct: 320 GENVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPQVADAI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCSS P SEI++VEGDSAGGS
Sbjct: 380 LEKAIQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPALSEIYLVEGDSAGGS 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH
Sbjct: 440 AKQGRDRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPGQLRYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
I+I+TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYKVERG+ YCY D E
Sbjct: 500 HIVIMTDADVDGAHIRTLLLTFFYRYQRALVDQGYIYIACPPLYKVERGRNHYYCYSDRE 559
Query: 537 LKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+ +++ FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+
Sbjct: 560 MNNLIRNEFPANANYTIQRFKGLGEMMPTQLWDTTMNPETRTLKRVEIEDAAEADRIFTI 619
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV R+E I+ +NL LDI
Sbjct: 620 LMGDRVAPRREFIETYGPKLNLLDLDI 646
>gi|303273552|ref|XP_003056137.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462221|gb|EEH59513.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/619 (60%), Positives = 466/619 (75%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+E+LDN+VDE QAG+AS I V L D VSV D+GRGIP D+HPA
Sbjct: 1 MYIGNTSTKGLHHLVWEVLDNSVDEIQAGHASVITVVLEPDGFVSVEDDGRGIPTDVHPA 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S+LETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE EVTVW+ G + Q
Sbjct: 61 TGVSSLETVLTVLHAGGKFGGDESGYHVSGGLHGVGISVVNALSELCEVTVWKGGKVFTQ 120
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+SRG V +T P + + GTR+RF PD Q+F FD N I R++ELAFLN
Sbjct: 121 AFSRGYAVADMTESFEP-GADGKNGTRVRFKPDHQIFKEKASFDPNIIISRMKELAFLNS 179
Query: 181 KLTIALR---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 237
T+ R + + N F GGL++YV LN + LHD + FR +V+G+ ++
Sbjct: 180 TATLKFRIPVDVHKKMTRKKANILSFPGGLKDYVVDLNMGSETLHDPITFRSEVEGVQVE 239
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQW +A++DT LGYANSIRT DGG+H++G+K +LTRT+N+ +K+K +KD D +L G
Sbjct: 240 GALQWTREAFTDTTLGYANSIRTSDGGSHLDGLKFALTRTVNAQARKAKLLKDGDSNLGG 299
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
EHVREGL+ +++V VP PEFEGQTKTRLGNPEVRKVV+ + E + E+LE +P VL SI
Sbjct: 300 EHVREGLSAVLAVWVPQPEFEGQTKTRLGNPEVRKVVEAVIGEQIAEHLEFYPSVLQSIF 359
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K+ A KAA AAKRAR+LVR+KSVLRS SLPGKL+DCS++ P+ SEIF+VEGDSAGGSA
Sbjct: 360 NKAQQAAKAAEAAKRARELVRRKSVLRSGSLPGKLSDCSNSDPDISEIFLVEGDSAGGSA 419
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQA+LPLRGKILNVERKDE++MYKN EI +++ ALGLG+KG+DF + ALRY K
Sbjct: 420 KQGRDRRFQAVLPLRGKILNVERKDESSMYKNTEISSMVTALGLGLKGDDFDESALRYSK 479
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER------GKQ-VQY 530
I+ILTDADVDGAHIRTLLLTF YRYQ+ LF+ G ++V VPPLYKVE GK+ + Y
Sbjct: 480 IVILTDADVDGAHIRTLLLTFLYRYQRALFERGKVFVAVPPLYKVEHTDGKGGGKRSITY 539
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
CYD+ +L K+ SS P + SIQRFKGLGEMMP QLW TTLNPE R+LK+L ++DAAE N
Sbjct: 540 CYDEVQLAKLLSSLPDDTKRSIQRFKGLGEMMPEQLWNTTLNPESRLLKRLTVDDAAEVN 599
Query: 591 VVFSSLMGARVDTRKELIQ 609
F LM +V R+ I+
Sbjct: 600 QTFQLLMSDKVAPRRAFIE 618
>gi|284928768|ref|YP_003421290.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
gi|284809227|gb|ADB94932.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
Length = 642
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/625 (59%), Positives = 480/625 (76%), Gaps = 12/625 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGP+GLHHLVYE++DN++DEA AG+ ++IEV + D SV+V DNGRGIP D+HPA
Sbjct: 27 MYIGTTGPKGLHHLVYEVVDNSIDEALAGHCTHIEVDINIDGSVTVTDNGRGIPTDIHPA 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETV+TVLHAGGKFGG S LHGVG+SVVNALSE L + VWRD Y Q
Sbjct: 87 TGKSALETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWLIIKVWRDNSVYTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G V+ L D++ +GT + F PDKQ+FT+ FD+ T++ R+RELA+LN
Sbjct: 145 RYECGVAVSELKKEP---DTEHPKGTSVSFLPDKQIFTSDTNFDYATLSARLRELAYLNS 201
Query: 181 KLTIALRKEDSDPEKNQ-YNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
++TI +D K + Y+E YF+ GGL EYV ++ +K+ LH D++ + G+ ++
Sbjct: 202 QITIKF----TDYRKQEPYSETYFYEGGLREYVTYMCRNKEALHKDIIYICGEKKGVQVE 257
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
AL WC DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +LSG
Sbjct: 258 AALLWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKIKENEPNLSG 317
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E+VREGLT I+SV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D I+
Sbjct: 318 ENVREGLTGIVSVKVPEPEFEGQTKTKLGNTEVRGIVDLLVGEVLGEYLEFNPHVGDIII 377
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KAA AA+RARDLVR+KSVL SS LPGKLADCS+ P E+EIF+VEGDSAGGSA
Sbjct: 378 EKAVQAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSTRDPAEAEIFLVEGDSAGGSA 437
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+
Sbjct: 438 KQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDVSQLRYHR 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TDADVDGAHIRTL+LTFFYRYQ+ L ++G IY+ PPLYK+ERG+ YCY++ +L
Sbjct: 498 IVIMTDADVDGAHIRTLILTFFYRYQRLLIEQGFIYIACPPLYKIERGRNHSYCYNEQQL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + P+NA Y+IQRFKGLGEMMPVQLW TT+NPE R +K++ I+DA EA+ +F+ LM
Sbjct: 558 QDNIKALPANAKYTIQRFKGLGEMMPVQLWNTTMNPETRSMKRVEIDDAVEADRIFTILM 617
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G +V R++ I+N + +NL+ LDI
Sbjct: 618 GDKVAPRRQFIENYGSKLNLNDLDI 642
>gi|86606189|ref|YP_474952.1| DNA gyrase subunit B [Synechococcus sp. JA-3-3Ab]
gi|86554731|gb|ABC99689.1| DNA gyrase, B subunit [Synechococcus sp. JA-3-3Ab]
Length = 642
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/624 (58%), Positives = 475/624 (76%), Gaps = 8/624 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DN+VDEA AGY + IEV L D SVSV DNGRGIP+D+HP
Sbjct: 25 MYIGSTGPKGLHHLVYEVVDNSVDEALAGYCNEIEVTLHPDGSVSVLDNGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SAL TV+TVLHAGGKFGG S LHGVG+SVVNALSE LE VWR+G Y Q
Sbjct: 85 TGQSALVTVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWLEARVWREGKVYFQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V +L P ++ R+GT +RF PD+ +F +FD++ +A R+RELA+LN
Sbjct: 143 RFERGAVVGSLQSEPQPAGAQ-RRGTEVRFKPDELIFPER-EFDYSLLAARLRELAYLNA 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I DP + Y FAGG++EYV ++N +K P+H D++ R + DG+ ++ A
Sbjct: 201 GLKIIFSDLRRDPPHREV--YQFAGGIKEYVAFINHEKTPIHPDIIYVRGERDGVEVEAA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWC+D Y+DT++G+AN+IRT +GGTH+EG+K +LT T+NS +K +KD D +L+GE+
Sbjct: 259 LQWCADVYTDTLIGFANNIRTTEGGTHLEGLKTALTLTINSQARKLNKLKDSDSNLAGEN 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I++V+VPNPEFEGQTKT+LGN EVR +V V E LTEYLE +P+V I+ K
Sbjct: 319 VREGLTAILAVKVPNPEFEGQTKTKLGNTEVRGIVQTLVSEALTEYLEFNPNVARGIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ + AA AA+RAR+LVR+KS L SS+LPGKLADCS P ESE+++VEGDSAGGSAKQ
Sbjct: 379 AIQSFNAAEAARRARELVRRKSALESSTLPGKLADCSCRDPAESEVYLVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQA+LPLRGKILN+E+ D A +YKN EIQ +I ALGLGVKGE+F LRYH+II
Sbjct: 439 GRDRQFQAVLPLRGKILNIEKADPAKIYKNAEIQAMITALGLGVKGEEFDPSQLRYHRII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QVQYCYDDAELK 538
++TDADVDG+HIRTLLLTFFYRYQK L ++G +Y+ PPLYK+E G+ V+YCY++AE +
Sbjct: 499 LMTDADVDGSHIRTLLLTFFYRYQKALLEQGYVYIACPPLYKIEWGRNNVRYCYNEAEKE 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+V S P+N Y+IQRFKGLGEMMP QLWETT+NP R+LKQ+ IEDAAEA+ +F+ LMG
Sbjct: 559 QVLRSLPANTKYTIQRFKGLGEMMPEQLWETTMNPATRVLKQITIEDAAEADRIFTILMG 618
Query: 599 ARVDTRKELIQNAANLVNLDHLDI 622
V R+E I+ + ++L LDI
Sbjct: 619 DAVGPRREFIEAHSAQLDLAALDI 642
>gi|384252438|gb|EIE25914.1| type II DNA topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 744
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/634 (58%), Positives = 476/634 (75%), Gaps = 15/634 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLHP 59
MYIGSTG RGLHHLVYEILDNA+DE Q+GYA ++V + L V+++D+GRGIP + HP
Sbjct: 114 MYIGSTGQRGLHHLVYEILDNAIDEVQSGYAHTVKVEMDLTSGWVTISDDGRGIPTNTHP 173
Query: 60 ATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
T +SALETVLTVLHAGGKFGG SGYSVSGGLHGVG+SVVNALSE L VTVWR G E+
Sbjct: 174 QTGRSALETVLTVLHAGGKFGGQGSGYSVSGGLHGVGISVVNALSEQLHVTVWRQGKEFQ 233
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q Y +G+P+T L LP + GT+++F DK VF + D TI R++ELAFLN
Sbjct: 234 QSYRQGRPMTELLEAQLPKKDSKKSGTQVKFLYDKDVFAKGVTMDPKTIRTRLQELAFLN 293
Query: 180 PKLTIALRKEDSD-----------PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR 228
TI R +S P + ++ + F GGL EYV++LN D +P+H+ +
Sbjct: 294 SNATIWFRTIESGSAPSNGNGASPPPEPEWEKLHFDGGLCEYVKYLNRDSQPMHEPIFVT 353
Query: 229 KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 288
+ VDG+ +++ALQWCSD +SD ++G+ NS++TIDGGTHI+G+KA+LTRTLN+LG+K+K +
Sbjct: 354 EKVDGVVVEVALQWCSDTFSDLLIGFVNSVKTIDGGTHIDGLKAALTRTLNTLGRKTKAL 413
Query: 289 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 348
K+ + +L+G+H+REGL+C+ISV+VP PEFEGQTKTRLGNPEVRK+VD V + + E LE+
Sbjct: 414 KENEANLAGDHIREGLSCVISVKVPEPEFEGQTKTRLGNPEVRKIVDACVAKGIMESLEM 473
Query: 349 HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 408
L +L K+++A +AA AAK+AR+LVR+KS+L S+LPGKL+DC+ST SEIF+V
Sbjct: 474 DTATLGLVLGKAVAAWRAAEAAKKARELVRRKSLLTKSTLPGKLSDCTSTDKALSEIFVV 533
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 468
EGDSAGGSAKQ RDRRFQA+LPLRGKILNVERKD+AA+YKN EI NLI ALGLG+KGE+
Sbjct: 534 EGDSAGGSAKQARDRRFQAVLPLRGKILNVERKDDAALYKNNEISNLIVALGLGLKGEEM 593
Query: 469 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
LRY K+I+LTDADVDGAHIRTLLLTF +RY + LFD G IYVGVPPLYK+E G+
Sbjct: 594 PN--LRYGKVILLTDADVDGAHIRTLLLTFLFRYARDLFDRGHIYVGVPPLYKLEVGRSS 651
Query: 529 QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 588
Y Y + EL S + Y++QRFKGLGEMMP QLW TTLNP RMLK+L + DAAE
Sbjct: 652 VYLYSEGELSARTQGLASGS-YTVQRFKGLGEMMPDQLWHTTLNPATRMLKRLTVNDAAE 710
Query: 589 ANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
A+ +F+ LMG +V+ R+ LIQ + L+ LDI
Sbjct: 711 ASHLFALLMGDKVEPRRALIQAHGASLALEDLDI 744
>gi|37522075|ref|NP_925452.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
gi|35213074|dbj|BAC90447.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
Length = 644
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/627 (57%), Positives = 459/627 (73%), Gaps = 12/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEI+DN+VDEA AG+ +I ++L AD S ++ D+GRGIP D HP
Sbjct: 25 MYIGSTGPRGLHHLVYEIVDNSVDEALAGHCKHIAISLGADGSATITDDGRGIPTDTHPR 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVL AGGKFGG S LHGVG +VVNALS L T+WR+G +Y Q
Sbjct: 85 TGKSTIETVLTVLGAGGKFGGGGYKVSGG--LHGVGAAVVNALSTILTATIWREGKQYIQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P L + DS+ R+GT I F PD ++FTT + FD +T+ R RELAFLN
Sbjct: 143 RFHRGIPEGGL---AVSSDSQKRRGTMISFLPDPEIFTTGVDFDFDTLLSRFRELAFLNA 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ R D E + Y + GG+ EYV+++ +K LH D++ ++ DG++++ A
Sbjct: 200 G--VEFRFSDLRGETERTESYIYEGGIREYVKYMTREKAALHPDIIFINQERDGVSVECA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQW +D Y+D +LG+AN+IRTIDGGTH+EG+KA LTRT NS +K+ +KD D +L+GEH
Sbjct: 258 LQWSTDVYNDNVLGFANNIRTIDGGTHLEGLKAVLTRTFNSFARKANKLKDGDKNLTGEH 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV+VPNPEFEGQTKT+LGNPEVR +VD + E LTEYLE HPDV+ SIL K
Sbjct: 318 VREGLTAVLSVKVPNPEFEGQTKTKLGNPEVRGIVDGVISEKLTEYLEFHPDVVASILEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L +++A AA++ARDLVR+KS L SS+LPGKLADC S P ESE+F+VEGDSAGGSAKQ
Sbjct: 378 ALQSMQAEEAARKARDLVRRKSALESSTLPGKLADCQSRDPAESEVFLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILN+ER D+ +Y N EIQ +I LGLG+K E+F LRYH+II
Sbjct: 438 GRDRRFQAILPLRGKILNIERADDRKIYGNNEIQAMITGLGLGLKTEEFDVGRLRYHRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE----RGKQVQYCYDDA 535
I+TDADVDGAHIRTLLLTFFYRY++ L ++G IY+ PPLYK+ R V+YCY +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYKRDLVEQGYIYIAQPPLYKISIGGGRNIDVRYCYSEQ 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E + + N Y +QRFKGLGEM QLWETT+NPE R L+Q+ IEDAAEA+ VF+
Sbjct: 558 EKEAILRGLRENQKYELQRFKGLGEMQADQLWETTMNPETRTLRQVTIEDAAEADRVFNI 617
Query: 596 LMGARVDTRKELIQNAANLVNLDHLDI 622
LMG RV+ R+E I+ + + LDI
Sbjct: 618 LMGDRVEPRREFIETYGPRLQMADLDI 644
>gi|86607821|ref|YP_476583.1| DNA gyrase subunit B [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556363|gb|ABD01320.1| DNA gyrase, B subunit [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 642
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/624 (58%), Positives = 473/624 (75%), Gaps = 8/624 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DN+VDEA AGY ++I+++L D SVSV DNGRGIP+D+HP
Sbjct: 25 MYIGSTGPKGLHHLVYEVVDNSVDEALAGYCNDIQISLHPDGSVSVLDNGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SAL TVLTVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+G Y Q
Sbjct: 85 TGQSALVTVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWREGKVYFQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V +L P S +R+GT +RF PD +F +FD+ +A R RELA+LN
Sbjct: 143 RFERGAVVGSLKSEPQPKGS-NRRGTEVRFKPDGLIFPER-EFDYAVLAARFRELAYLNA 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I DP + Y +AGG++EYV ++N +K P+H D++ + + DG+ +++A
Sbjct: 201 GLKITFSDLRRDPPHCE--TYQYAGGIKEYVAFINHEKTPIHSDIIYIQGERDGVEVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQWCSD Y+DT++G+AN+IRT +GGTH+EG+K SLT T+NS +K +KD D +L+GE+
Sbjct: 259 LQWCSDVYTDTLIGFANNIRTNEGGTHLEGLKTSLTLTINSQARKLNKLKDSDSNLAGEN 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV+VPNPEFEGQTKT+LGN EVR +V V E LTEYLE +P+V I+ K
Sbjct: 319 VREGLTAIVSVKVPNPEFEGQTKTKLGNTEVRGIVQTLVSEALTEYLEFNPNVARGIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ + AA AA+RAR+LVR+KS L SS+LPGKLADCS P ESE+++VEGDSAGGSAKQ
Sbjct: 379 AIQSFNAAEAARRARELVRRKSALESSTLPGKLADCSCRDPAESEVYLVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQA+LPLRGKILN+E+ D A +YKN EIQ +I ALGLGVKG++F LRYH+II
Sbjct: 439 GRDRQFQAVLPLRGKILNIEKADPAKIYKNAEIQAMITALGLGVKGDEFDPSQLRYHRII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QVQYCYDDAELK 538
++TDADVDG+HIRTLLLTFFYRYQK L ++G +Y+ PPLYK+E G+ V+YCY DAE
Sbjct: 499 LMTDADVDGSHIRTLLLTFFYRYQKALLEQGYVYIACPPLYKIEWGRNNVRYCYSDAEKD 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ P+NA Y+IQRFKGLGEMMP QLWETT+NP R LKQ+ IEDA EA+ +F+ LMG
Sbjct: 559 QILRGLPANAKYTIQRFKGLGEMMPEQLWETTMNPATRTLKQITIEDAVEADRIFTILMG 618
Query: 599 ARVDTRKELIQNAANLVNLDHLDI 622
V R+E I+ + ++L LDI
Sbjct: 619 DAVGPRREFIEAHSAHLDLAALDI 642
>gi|145344184|ref|XP_001416617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576843|gb|ABO94910.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 662
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/620 (58%), Positives = 467/620 (75%), Gaps = 4/620 (0%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E+LDN+VDE QAG+AS++ V + + VSV D+GRGIP D+HP
Sbjct: 44 MYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVRVVVEENGFVSVVDDGRGIPTDVHPV 103
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLT+LHAGGKFGG SSGY VSGGLHGVG+SVVNALSE +EVTVWR+G EY Q
Sbjct: 104 TGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGISVVNALSELVEVTVWRNGNEYIQ 163
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+SRG + + S ++GT IRF PD Q+F ++FD I R++ELAFLN
Sbjct: 164 SFSRGIALGPMQEKKQD-GSGQKKGTMIRFKPDDQIFD-KVKFDPTIIRTRMKELAFLNS 221
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ LR D ++ + + FA GL++YV L +D LH+ + F +DG+ ++ AL
Sbjct: 222 GTELHLRTFDKKTKEYEDEKLLFAEGLKDYVLDLTSDATRLHEPITFSGTMDGVRVEGAL 281
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
W +D+YSDT+LGYANSIRT DGGTH++G+K SLT+TLN + +K+K +KD D +L G+H+
Sbjct: 282 CWTADSYSDTLLGYANSIRTTDGGTHLDGLKYSLTKTLNVVSRKAKLLKDSDPNLGGDHI 341
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL+ +I+V VP PEFEGQTKTRLGN EVR++V+ + + ++E +P VL SI +K+
Sbjct: 342 REGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVENIANDAVAGHMEFNPSVLKSIFAKA 401
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
SA KAA AAKRAR++VR+K+VL S+ LPGKL+DCSS+ +++EIF+VEGDSAGGS KQG
Sbjct: 402 QSAFKAAEAAKRAREMVRRKTVLTSNRLPGKLSDCSSSDADQTEIFLVEGDSAGGSCKQG 461
Query: 421 RDRRFQAILPLRGKILNVERK-DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQA+LPLRGKI+NVERK D AA+YKN EI N+I ALGLG GED ALRY KII
Sbjct: 462 RDRGFQAVLPLRGKIMNVERKLDAAALYKNTEITNMISALGLGGMGEDLDTTALRYSKII 521
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
ILTDADVDGAHIRTLLLTF YRYQ+ LF++G +Y VPPLYKV GK+ YCYD+ +L++
Sbjct: 522 ILTDADVDGAHIRTLLLTFLYRYQRDLFEKGYVYAAVPPLYKVVVGKKETYCYDEDDLQE 581
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V S P IQRFKGLGEMMP QLW TTLNP+ R+LK+L ++DA+ AN +FS+LM
Sbjct: 582 VLVSLPEGGAKHIQRFKGLGEMMPEQLWSTTLNPKTRVLKRLTVDDASAANHMFSTLMSK 641
Query: 600 RVDTRKELIQN-AANLVNLD 618
V+ R++LI + + L ++D
Sbjct: 642 DVEPRRKLITDEGSTLASID 661
>gi|307105660|gb|EFN53908.1| hypothetical protein CHLNCDRAFT_48978 [Chlorella variabilis]
Length = 663
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/643 (56%), Positives = 464/643 (72%), Gaps = 40/643 (6%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNS-VSVADNGRGIPIDLHP 59
MYIGSTG RGLHHLVYEILDNA+DE QAG+A+ + V L D V+++DNGRGIP D+HP
Sbjct: 40 MYIGSTGQRGLHHLVYEILDNAIDEVQAGFATEVHVELNLDTGWVTISDNGRGIPTDVHP 99
Query: 60 ATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
T KSALETVLTVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALS+ LEV+VWR ++
Sbjct: 100 VTGKSALETVLTVLHAGGKFGGDSSGYSVSGGLHGVGLSVVNALSDELEVSVWRGRSQFS 159
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-------------TAIQFDHN 166
Q++SRG + L ++GTR+RF D +F+ + FD +
Sbjct: 160 QRFSRGVAQSPL-VEAPAAAGAPKRGTRVRFIYDDTIFSKTHTSPRPPLLPHCSATFDPD 218
Query: 167 TIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-------YFFAGGLEEYVQWLNTDKK 219
TI R+RELAFLN + TI R + E + ++GGL EYV++LN DK
Sbjct: 219 TIRSRLRELAFLNSRATIYFRAGNGSSNGAAAAEAEPDWEVFHYSGGLAEYVRFLNRDKV 278
Query: 220 PLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 279
P+H+ + F K G+ DT++G+ NSI+TIDGGTHI+G KA+LTRT+N
Sbjct: 279 PIHEPLCFSKQASGLR-----------RGDTIIGFVNSIKTIDGGTHIDGTKAALTRTVN 327
Query: 280 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 339
SLG+K K +K+ + +L+GE++REGL ++SV+VPNPEFEGQTKTRLGNPEVR++V+ V
Sbjct: 328 SLGRKLKAIKEGESNLAGEYIREGLGAVVSVKVPNPEFEGQTKTRLGNPEVRRIVEGVVS 387
Query: 340 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 399
+ E LE+ P ++IL+K++ A KAA AAK+AR+LVR+KSVL S+LPGKLADCSST
Sbjct: 388 SAVGEALEMEPTTFNTILAKAMQAFKAAEAAKKARELVRRKSVLTKSTLPGKLADCSSTN 447
Query: 400 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 459
E+EIF+VEGDSAGGS KQ RDRR+QA+LPLRGKILN D++ +YKN EI NLI L
Sbjct: 448 RAETEIFLVEGDSAGGSTKQARDRRYQAVLPLRGKILN----DDSKLYKNNEIANLIVGL 503
Query: 460 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 519
GLG+KGED LRY KIIILTDADVDGAHIRTLLLTF +RYQ+ +F++G +YVGVPPL
Sbjct: 504 GLGLKGEDAVN--LRYGKIIILTDADVDGAHIRTLLLTFLFRYQRAIFEKGHVYVGVPPL 561
Query: 520 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 579
YK++ G++ QYCY + ELK + + Y++QRFKGLGEMMP QLW TTLNPE R L+
Sbjct: 562 YKLDVGRRAQYCYTEEELKAALAELAPCS-YTMQRFKGLGEMMPEQLWSTTLNPETRTLR 620
Query: 580 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+L I+DAAEA+ +F+ LMG +V R+ELI+ + + L+ LDI
Sbjct: 621 KLTIDDAAEASHMFALLMGDKVGPRRELIERHGSRLALEELDI 663
>gi|308801547|ref|XP_003078087.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
gi|116056538|emb|CAL52827.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
Length = 684
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/621 (56%), Positives = 460/621 (74%), Gaps = 20/621 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E+LDN+VDE QAG+AS+++V + D V+V D+GRGIP D+HP
Sbjct: 80 MYIGSTSTKGLHHLVWEVLDNSVDEVQAGHASHVQVTVDDDGFVTVMDDGRGIPTDVHPV 139
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDG-MEYH 119
T KS+LETVLT+LHAGGKFGG SSGY VSGGLHGVG+SVVNALSE +EVTV G M+
Sbjct: 140 TGKSSLETVLTILHAGGKFGGDSSGYHVSGGLHGVGISVVNALSELVEVTVHATGNMKEK 199
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q+ G +++GT +RF PD Q+F ++FD+N I R++ELAFLN
Sbjct: 200 QQDGSG----------------NKKGTMVRFKPDDQIFD-KVKFDNNIIRTRMKELAFLN 242
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
+ L+ ++ + + +A GL++YV L D LH+ + F +++GI ++ +
Sbjct: 243 KGTELHLKTFNTKTKSYVEEKLVYAEGLKDYVLDLTADATRLHEPITFSGEMEGIRVEGS 302
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L W +D+YSDT+LGYANSIRTIDGGTHI+G+K SLT+T+N+ +K+K +KD D +L G+H
Sbjct: 303 LCWTADSYSDTLLGYANSIRTIDGGTHIDGLKYSLTKTINNASRKAKLLKDADSNLGGDH 362
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGL+ +I+V VP PEFEGQTKTRLGN EVR++V+ + + + E + L ++ +K
Sbjct: 363 VREGLSGVIAVWVPEPEFEGQTKTRLGNSEVRRIVENIASDAVMGHFEFNSADLKAVFAK 422
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ SA KAA AAKRAR+LVR+K+VL ++ LPGKL+DCSS+ + +EIF+VEGDSAGGS KQ
Sbjct: 423 AQSAFKAAEAAKRARELVRRKTVLTANRLPGKLSDCSSSDADRTEIFLVEGDSAGGSCKQ 482
Query: 420 GRDRRFQAILPLRGKILNVERK-DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDR FQA+LPLRGKI+NVERK D AA+YKN EI N+I ALGLG GED ALRY KI
Sbjct: 483 GRDRSFQAVLPLRGKIMNVERKLDAAALYKNTEITNMISALGLGTMGEDLDTSALRYSKI 542
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
IILTDADVDGAHIRTLLLTF YRYQ+ LF++G +Y VPPLYKV GK+ YCYDD +L+
Sbjct: 543 IILTDADVDGAHIRTLLLTFLYRYQRDLFEKGFVYAAVPPLYKVAVGKKETYCYDDDDLQ 602
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+V ++ P A IQRFKGLGEMMP QLW TTL+P+ R+LK+L ++DA+ AN +FS+LM
Sbjct: 603 RVLAALPEGANKHIQRFKGLGEMMPEQLWSTTLDPKTRLLKRLTVDDASAANHMFSTLMS 662
Query: 599 ARVDTRKELI-QNAANLVNLD 618
VD R+ LI + A L ++D
Sbjct: 663 KEVDPRRRLIEEEGAALASID 683
>gi|30680397|ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332003318|gb|AED90701.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 519
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/406 (83%), Positives = 379/406 (93%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEILDNA+DEAQAGYAS ++V L AD SVSV DNGRGIP DLHPA
Sbjct: 111 MYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPA 170
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS+LETVLTVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME+ Q
Sbjct: 171 TKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQ 230
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNP
Sbjct: 231 NYSRGKPITTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNP 290
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+AL
Sbjct: 291 KVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVAL 350
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHV
Sbjct: 351 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHV 410
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+SKS
Sbjct: 411 REGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKS 470
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 406
L+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST PE S ++
Sbjct: 471 LNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSGMY 516
>gi|299117008|emb|CBN73779.1| DNA topoisomerase IV subunit B [Ectocarpus siliculosus]
Length = 688
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/629 (53%), Positives = 444/629 (70%), Gaps = 9/629 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+E++DNA+DEA AGY + V L D S +V DNGRGIP D+HP
Sbjct: 62 MYIGSTGPKGLHHLVFEVVDNAIDEALAGYCDTVYVTLEEDGSCTVRDNGRGIPCDIHPR 121
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALS+ EV V R G +
Sbjct: 122 TKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSQWAEVEVVRGGKRHSL 181
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK T +++ GT +RF PD ++F T +F+ ++GR+ ELA+LN
Sbjct: 182 SFERGK--TQGDLFTADAGAEEAGGTAVRFLPDPEIFKTTTEFEFERLSGRMDELAYLNA 239
Query: 181 KLTIALRKE----DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH---DVVGFRKDVDG 233
++I + D D + Y GG++E+V+ + +K+ LH V+ + DG
Sbjct: 240 GVSIVMADARSGVDEDGNFKKTETYLHKGGVQEFVELMCKEKQHLHPDMKVIRALGERDG 299
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ ++ L W SD Y+D+++ +AN IRT DGGTH+EG+K+ +TRT+NS+G+KS +KD
Sbjct: 300 VQVEACLSWSSDMYTDSLVSFANGIRTGDGGTHLEGLKSIVTRTVNSMGRKSGKLKDSQS 359
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
+L G+ VREGLT ++SV+VP PEFEGQTK RLGNPEVR +VD V E L + E HP +L
Sbjct: 360 NLGGDFVREGLTAVVSVKVPEPEFEGQTKNRLGNPEVRGIVDSIVGEELVKLFEWHPKIL 419
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
+IL K+ SA AA AAK ARD+VR+KS+L S+ LPGKLADC+S P ESEI+IVEGDSA
Sbjct: 420 GAILDKASSAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPVESEIYIVEGDSA 479
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 473
GSAKQGRDRR QAILPLRGKILN+E+ +Y+N E+Q LI ALGLG+KG +F +L
Sbjct: 480 AGSAKQGRDRRTQAILPLRGKILNIEKCASERIYQNNELQALISALGLGIKGNEFDASSL 539
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH+I+++TDADVDG+HIR LLLTFF+RYQ++L + G +++ PPLYK+++GK +Y Y
Sbjct: 540 RYHRIVVMTDADVDGSHIRILLLTFFFRYQRSLIENGFVFIACPPLYKIKQGKTEKYVYT 599
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
E S P++ +QRFKGLGEMMP QLW+TT++P +R LK + +EDAA A+ +F
Sbjct: 600 QEECDSAVSELPASPAVQLQRFKGLGEMMPQQLWDTTMDPARRTLKLVTVEDAAAADRIF 659
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
S LMG V RKE I AN + LD LD
Sbjct: 660 SVLMGDNVGPRKEFINEHANNLKLDDLDF 688
>gi|159464611|ref|XP_001690535.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
gi|158280035|gb|EDP05794.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
Length = 649
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/636 (56%), Positives = 465/636 (73%), Gaps = 15/636 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLHP 59
MYIG TG GLHHL++E++DNAVDE QAG+AS +EV + L+ VSV DNGRGIP+D+HP
Sbjct: 15 MYIGGTGSDGLHHLIWEVVDNAVDEVQAGHASAVEVDVDLSSGWVSVVDNGRGIPVDVHP 74
Query: 60 ATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
T KSALETVLTVLHAGGKFGG +SGY VSGGLHGVG+SVVNALS LEVTVWR G Y
Sbjct: 75 VTGKSALETVLTVLHAGGKFGGDNSGYKVSGGLHGVGISVVNALSSELEVTVWRAGSRYS 134
Query: 120 QKYSRGKPVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
Q+YSRG P+ L +LP S++ R GT++RF D +F + + + IA R+ ELAF
Sbjct: 135 QRYSRGAPLEELRVQLLPPGSEEAGRSGTQVRFLYDASIFAKDVAYSADVIATRLHELAF 194
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGIT 235
LN + TI R + Q+ + ++GGL E+V L PLH+ VV G+
Sbjct: 195 LNARATIRFRALRRGKPEGQWQVFQYSGGLREFVGCLQAAYTPLHEALVVTRADGGSGVV 254
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ ALQW +D++ + + G+ANSI T+DGGTH+EG++A LTR + LG+K+K +KD D L
Sbjct: 255 VEAALQWAADSFKEEVRGFANSIHTVDGGTHMEGLRAGLTRAVTQLGRKAKQIKDSDPPL 314
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SGEHVREGL ++SV+VPNPEFEGQTKTRLGNPEVRK+V+ +V E + E+LE HP L +
Sbjct: 315 SGEHVREGLGAVVSVKVPNPEFEGQTKTRLGNPEVRKIVENAVYEAVGEWLEAHPAALAA 374
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRS--SSLPGKLADCSSTTPEESEIFIVEGDSA 413
+ +K+L++ +AA AA++AR+LVR+K+ L + S+LPGKLADC+ST EE+EI+IVEGDSA
Sbjct: 375 LCAKALTSARAAEAARKARELVRRKTSLFTGRSTLPGKLADCTSTNREETEIYIVEGDSA 434
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEA--AMYKNEEIQNLIRALG----LGVKGED 467
GGSAKQ RDRRFQAILPL+GKILNVER +A MYKN EI NLI ALG +GV+
Sbjct: 435 GGSAKQARDRRFQAILPLKGKILNVERLTDANELMYKNTEISNLI-ALGYERTVGVRSRC 493
Query: 468 FKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
+ L Y KI++LTDADVDGAHIRTLLLTF +R++ LF G +YV VPPLYKVERGK
Sbjct: 494 HAFKLLLYGKIVVLTDADVDGAHIRTLLLTFLFRHRPQLFAAGRVYVAVPPLYKVERGKS 553
Query: 528 VQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
V + + DAEL V + YS+QRFKGLGEMMP QLW+TTLNPE R+L++L + D
Sbjct: 554 VWWAHSDAELAALVSEQRLAPGGYSVQRFKGLGEMMPQQLWDTTLNPESRLLRRLTVRDV 613
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+EA+ + + LMG +V+ RK LI+ + ++LD LD+
Sbjct: 614 SEADSMLTMLMGTKVEPRKALIEAYSRRLSLDALDV 649
>gi|302830013|ref|XP_002946573.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
gi|300268319|gb|EFJ52500.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
Length = 676
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/645 (54%), Positives = 460/645 (71%), Gaps = 26/645 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVAL-LADNSVSVADNGRGIPIDLHP 59
MYIG TG GLHHLV+E++DN+VDE QAG+A+ +EV + L+ V V D+GRGIP+D+HP
Sbjct: 35 MYIGGTGSEGLHHLVWEVVDNSVDEVQAGHATRVEVQVDLSSGWVVVTDDGRGIPVDVHP 94
Query: 60 ATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
T KSALETVLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE L VTVWR G+ Y
Sbjct: 95 VTGKSALETVLTVLHAGGKFGGEDSGYKVSGGLHGVGISVVNALSEQLTVTVWRAGVRYS 154
Query: 120 QKYSRGKPVTTLTCHVLPVDSK--DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
Q+YSRG + + L DS+ DR GT++ F D+ +F + + ++ + IA R+ ELAF
Sbjct: 155 QRYSRGVALEEVQRTELQPDSEEADRTGTQVCFLYDRTIFASDVSYNPDIIATRLHELAF 214
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD--VDGIT 235
LN T+ ++ + F+GGL E+V L + PLH+ + + G+
Sbjct: 215 LNSSATMRFNATRKGQLDGEWQVFQFSGGLREFVGCLQSGYTPLHEAICVSRSDPPSGVV 274
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+ ALQW +D++ + + G+ANSI T DGGTH++ ++++LTRT+ +L KK K +K+ D L
Sbjct: 275 VHAALQWAADSFREEIRGFANSIHTADGGTHLDALRSALTRTITALAKKMKLIKEGDPPL 334
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SGEH+REGL +I+V+VPNPEFEGQTKTRLGNPEVRK+V+ +V E + E+LE HP L +
Sbjct: 335 SGEHIREGLGAVIAVQVPNPEFEGQTKTRLGNPEVRKIVEATVAEAVGEWLEAHPADLSA 394
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+L K+L+A +AA AA++AR+L+R+K+ L S LPGKLADC+S + +EI++VEGDSAGG
Sbjct: 395 LLGKALTAARAADAARKARELIRRKTSLSRSMLPGKLADCTSEERDRTEIYLVEGDSAGG 454
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG------------- 462
SAKQ RDRRFQA+LPL+GKILNVER AAMYKN EI +LI ALGLG
Sbjct: 455 SAKQARDRRFQAVLPLKGKILNVERVAGAAMYKNAEISSLIVALGLGTDRAPALATRGPD 514
Query: 463 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV 522
V D +AL Y KI+ILTDADVDGAHIR LLLTF +RY+ LF G +YV VPPLYKV
Sbjct: 515 VAVRDTASKALEYGKIVILTDADVDGAHIRALLLTFLFRYRPQLFYAGHVYVAVPPLYKV 574
Query: 523 ERGKQVQYCYDDAELKKVKSSFPSNAL----YSIQRFKGLGEMMPVQLWETTLNPEQRML 578
ERG+ + + + + EL++V S N L YS+QRFKGLGEMMP QLW+TTLNP R+L
Sbjct: 575 ERGRSLWWAHTEEELRRVVS---ENRLAPGGYSVQRFKGLGEMMPQQLWDTTLNPATRLL 631
Query: 579 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAAN-LVNLDHLDI 622
++L + DAAEA+ + +SLMGA+V RK LIQ +N L ++ LD+
Sbjct: 632 RRLTVRDAAEADALLTSLMGAQVGPRKALIQEYSNRLQSISSLDV 676
>gi|19909557|dbj|BAB86974.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
Length = 545
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/550 (61%), Positives = 425/550 (77%), Gaps = 9/550 (1%)
Query: 18 ILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGG 77
++DNAVD+A AGY + I+V LL D S V DNGRGIP D+HP T KSALETVLT+LHAGG
Sbjct: 1 VVDNAVDKALAGYCNTIDVRLLKDGSCQVTDNGRGIPTDIHPQTGKSALETVLTILHAGG 60
Query: 78 KFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLP 137
KFGG S LHGVG+SVVNALSE +EVTVWR+G + Q++ +G P+ L V P
Sbjct: 61 KFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQGNPIGEL--QVAP 116
Query: 138 VDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQ 197
D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN + I E KN
Sbjct: 117 -DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRIDFTDERLQLTKNH 175
Query: 198 ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLG 253
Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ ++ ALQWC DAYSD +LG
Sbjct: 176 EPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQWCVDAYSDNILG 235
Query: 254 YANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVP 313
+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LSGE++REGLT I+SV+VP
Sbjct: 236 FANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIREGLTAIVSVKVP 295
Query: 314 NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRA 373
+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D IL K++ A AA AA+RA
Sbjct: 296 DPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAIQAFNAAEAARRA 355
Query: 374 RDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG 433
R+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG
Sbjct: 356 RELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRRFQAILPLRG 415
Query: 434 KILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRT 493
KILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRYH+I+I+TDADVDGAHIRT
Sbjct: 416 KILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQLRYHRIVIMTDADVDGAHIRT 475
Query: 494 LLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQ 553
LLLTFFYRYQ++L ++G +Y+ PPLYK+ERG+ YCY++ EL++ ++FP NA Y+IQ
Sbjct: 476 LLLTFFYRYQRSLLEQGYMYIACPPLYKLERGRNHYYCYNERELQERIATFPENANYTIQ 535
Query: 554 RFKGLGEMMP 563
RFKGLGEMMP
Sbjct: 536 RFKGLGEMMP 545
>gi|452820768|gb|EME27806.1| DNA gyrase subunit B [Galdieria sulphuraria]
Length = 711
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/651 (52%), Positives = 457/651 (70%), Gaps = 33/651 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLH LV+E++DN+VDE+ AG+ + + V L +D SVSV DNGRGIP+D+H
Sbjct: 65 MYIGSTGIQGLHQLVFELVDNSVDESIAGFCTKVTVVLHSDKSVSVMDNGRGIPVDMHTT 124
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ KSALETVLTVLHAGGKFG S GY VSGGLHGVGLSVVNALSE L V V R+ Y Q
Sbjct: 125 SGKSALETVLTVLHAGGKFG--SGGYHVSGGLHGVGLSVVNALSERLYVGVVRNNQLYEQ 182
Query: 121 KYSRGKP-----VTTLTCHVL----PVDSKDR------QGTRIRFWPDKQVFTTAIQFDH 165
++ RG P V +T +L + DR GT++ F+PD +F ++ D
Sbjct: 183 EFQRGIPLGPMQVCDMTSDLLMEREGIQQYDRGFLQQKSGTKVHFYPDPVIFGETLEMDA 242
Query: 166 NTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNE-------------YFFAGGLEEYVQ 212
+ +A R ELA+LN L I L +E E + E + GG+ E+VQ
Sbjct: 243 SFLAKRFDELAYLNAGLQIILYREMHQIEVQESVENGSQSRKQIHPQVFIHQGGIREFVQ 302
Query: 213 WLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKA 272
+L+ +K+ +H+ V + + I ++ ALQW + YS+ +LG+ANSIR +DGG H+EG K+
Sbjct: 303 FLSKEKQSMHETVYIHRRIKQIEMEAALQWNREQYSEIILGFANSIRNLDGGVHVEGFKS 362
Query: 273 SLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRK 332
LT+ + + KK T K++ +S +GE +REGL IISV+VP PEF+GQTKT+LGNPE+R
Sbjct: 363 GLTKCFHQMAKK--TSKNETLSWNGELIREGLIGIISVKVPEPEFQGQTKTKLGNPEIRG 420
Query: 333 VVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKL 392
+V+Q + E + ++L+ +P+V ++L K +A +AA AAKRAR+L+R+KS L S++LPGKL
Sbjct: 421 LVEQVIIEEVGDFLQTNPEVFQALLDKVNAAARAAEAAKRARELIRRKSALESAALPGKL 480
Query: 393 ADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEI 452
ADC++ P+E+E+FIVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ ++ +YKN EI
Sbjct: 481 ADCATRNPDEAELFIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKANDVKIYKNAEI 540
Query: 453 QNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCI 512
LI ALG GV FK E LRYH++II+TDADVDGAHIRTLLLTFFYRYQ+ L + G +
Sbjct: 541 HALITALGAGVSDTHFKLELLRYHRVIIMTDADVDGAHIRTLLLTFFYRYQRPLIEHGHL 600
Query: 513 YVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 571
Y+ PPL+K ERGK +Y +D A L + ++ SNA Y+IQRFKGLGEMMPV+LW TT+
Sbjct: 601 YIACPPLFKFERGKTCKYFFDQASLDRFLEEELASNAKYTIQRFKGLGEMMPVELWNTTM 660
Query: 572 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
NP+ R LKQ+ I DAAE+N +F+ L+G +VD RK + A ++ D LDI
Sbjct: 661 NPQTRCLKQVTITDAAESNNLFTMLLGDKVDRRKAFLNEHARSLSWDQLDI 711
>gi|19909553|dbj|BAB86972.1| DNA gyrase subunit B [Leptolyngbya boryana IAM M-101]
Length = 546
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/555 (59%), Positives = 431/555 (77%), Gaps = 12/555 (2%)
Query: 10 GLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETV 69
GLHHLVYE++DN+VDEA AGY I++++ AD SV+V D+GRGIP +HP T KSALETV
Sbjct: 1 GLHHLVYEVVDNSVDEALAGYCKAIDISINADGSVTVTDDGRGIPTGIHPKTGKSALETV 60
Query: 70 LTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 129
+T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q++ RG +
Sbjct: 61 MTILHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREKKVHLQRFERGIAMG 118
Query: 130 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALR 187
L P + R GT + F PD +FT +FD+ T++GR+RELA+LN ++ A
Sbjct: 119 ELQVEPYP---QARTGTSVTFLPDASIFTETTKFDYTTLSGRLRELAYLNGGVRIKFADH 175
Query: 188 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 246
+E S+ E + YF+ GG+ EY+ ++N +K+PLH+ V F + +GI +++ALQWCSDA
Sbjct: 176 REGSERE----DVYFYEGGIREYISYMNREKQPLHEEVIFVSGERNGIQVEVALQWCSDA 231
Query: 247 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 306
Y+D ++G+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE++REGLT
Sbjct: 232 YNDNIIGFANNIRTVDGGTHLEGLKAVLTRTLNTIARKRNKIKENESNLAGENIREGLTA 291
Query: 307 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 366
+ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P+V D+I+ K++ A KA
Sbjct: 292 VISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPNVSDAIIEKAVQAFKA 351
Query: 367 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 426
A AA+ AR++VR+KSVL SS+LPGKLADC+S P ESEI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 352 AEAARHAREMVRRKSVLESSTLPGKLADCASRDPSESEIYIVEGDSAGGSAKQGRDRRFQ 411
Query: 427 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 486
AILPLRGKILN+E+ D++ +YKN EIQ LI ALGLG+KGE+F LRYH+III+TDADV
Sbjct: 412 AILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDVSQLRYHRIIIMTDADV 471
Query: 487 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 546
DGAHIRTLLLTFFYRYQ+ + D+G +Y+ PPL+KVERG+ YCY + EL++ ++FP
Sbjct: 472 DGAHIRTLLLTFFYRYQRMMVDQGYVYIACPPLFKVERGRNHYYCYSERELQERLATFPD 531
Query: 547 NALYSIQRFKGLGEM 561
NA Y+IQRFKGLGEM
Sbjct: 532 NASYNIQRFKGLGEM 546
>gi|333977511|ref|YP_004515456.1| DNA gyrase subunit B [Desulfotomaculum kuznetsovii DSM 6115]
gi|333820992|gb|AEG13655.1| DNA gyrase, B subunit [Desulfotomaculum kuznetsovii DSM 6115]
Length = 636
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/623 (54%), Positives = 451/623 (72%), Gaps = 22/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG+ IEV + DNSV+V DNGRGIP+D+HP
Sbjct: 30 MYIGSTGPRGLHHLVYEVVDNSIDEAMAGFCDRIEVIVHKDNSVTVIDNGRGIPVDIHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A+ETVLT+LHAGGKFGG+ Y VSGGLHGVG+SVVNALSE LEV + RDG YHQ
Sbjct: 90 TGLPAVETVLTMLHAGGKFGGTV--YKVSGGLHGVGVSVVNALSEWLEVEIRRDGHVYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK VT L V + + GT++ F PD ++F + F+H T++ R+REL+FLN
Sbjct: 148 RYERGKAVTPLKT----VGTANATGTKVSFKPDAEIFEELV-FNHETLSQRLRELSFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I R E + Q Y GG+ ++V++LN +K+ LH+ V G R D + +
Sbjct: 203 GIKIIFRDERT----GQEIVYQHDGGIRDFVRYLNKNKEVLHNRPIYVFGER---DNVQV 255
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ ++ Y +++ Y N+I T+DGGTH G K++LTR +N G+K +K+ +L+
Sbjct: 256 EVALQY-TEGYVESLFSYVNNIHTVDGGTHEAGFKSALTRVINDYGRKYNLLKNGTPALA 314
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT +ISV+VP P+FEGQTKT+LGN EVR +VD V + L +LE +P V I
Sbjct: 315 GEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEVRGIVDTVVADGLATFLEENPGVARRI 374
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+++A +A AA++AR+L R+KS L S+SLPGKLADCS P ++E+++VEGDSAGGS
Sbjct: 375 MDKAITAARAREAARKARELTRRKSALESASLPGKLADCSDRDPSKTELYLVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILNVE+ + NEEI+ LI ALG G+ GEDF RYH
Sbjct: 435 AKQGRDRRFQAILPLRGKILNVEKARMDKILANEEIRALITALGTGI-GEDFDLSKARYH 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+I++++DADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLY++ +GK +Y Y DAE
Sbjct: 494 RILLMSDADVDGAHIRTLLLTFFYRYMRPLLEAGYVYIAQPPLYRIRKGKVDRYAYSDAE 553
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ + + SIQR+KGLGEM P QLWETT+NPE+R + ++ IEDA EA+ +FS L
Sbjct: 554 LEEILKEIGRDGV-SIQRYKGLGEMNPQQLWETTMNPEKRTILKVSIEDAIEADAIFSML 612
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG RV+ R+E I QNA + NLD
Sbjct: 613 MGDRVEPRREFIQQNARAVRNLD 635
>gi|88602335|ref|YP_502513.1| DNA gyrase, B subunit [Methanospirillum hungatei JF-1]
gi|88187797|gb|ABD40794.1| DNA gyrase subunit B [Methanospirillum hungatei JF-1]
Length = 675
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/651 (52%), Positives = 453/651 (69%), Gaps = 39/651 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPID-LHP 59
MYIGST RGLHHLVYE++DN++DEA AGY ++I+V + D SVSV DNGRGIPID +
Sbjct: 30 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCTHIQVVIHQDGSVSVEDNGRGIPIDPMKD 89
Query: 60 ATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
NK+ALETVLTVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L TVW+DG EY
Sbjct: 90 NDNKTALETVLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSVELTATVWKDGYEYR 147
Query: 120 QKYSRGKPVTTLTCHVLPVDS-KDR---------------------------QGTRIRFW 151
+SRG+P T L + KDR GT IRF
Sbjct: 148 MFFSRGQPQTDLEKKEEDFEEIKDRYIKRYGSLPDNCPETKEEFLNRYLSKISGTMIRFK 207
Query: 152 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 211
PD ++F T I+FD++ +A R+RELAFLN +TI++ E + + + + GG+ EYV
Sbjct: 208 PDSKIFET-IEFDYDILAHRLRELAFLNSGITISIADERCEDLEECSEVFSYEGGISEYV 266
Query: 212 QWLNTDKKPLHD-VVGF-RKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 268
++LN + +P+H+ V+ F RKD + + +D+A Q+ + AYS+ + Y NS+ T +GGTH+E
Sbjct: 267 RYLNHEAQPIHESVISFSRKDEEARVEVDIAFQYAA-AYSEKVYTYVNSVNTKEGGTHLE 325
Query: 269 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 328
G +++LT+ +N +GK++K +KD+++SL G+ VREGLT IISVR+ NP+FEGQTK +LGN
Sbjct: 326 GFRSALTKAINKMGKENKAIKDQNLSLKGDDVREGLTAIISVRMANPQFEGQTKMKLGNS 385
Query: 329 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 388
EV+ +VD V L EY E HP L +I+ K++ A +A AA++A++L R+KS L SS L
Sbjct: 386 EVKGIVDSLVYASLCEYFEEHPKELAAIVDKAVLAYQAREAARKAKELARRKSTLESSGL 445
Query: 389 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
PGKLADCS + E+SEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + K
Sbjct: 446 PGKLADCSERSAEKSEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKATVHKILK 505
Query: 449 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 508
N EIQ LI A+G GV GE F E RYH III+TDADVDGAHI TLL+TFF+RY + L +
Sbjct: 506 NNEIQALISAIGTGV-GESFDIEKARYHHIIIMTDADVDGAHISTLLMTFFFRYLQPLIE 564
Query: 509 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 568
G IY+ PPLY++ +GKQ +Y Y + E+K++ + ++QR+KGLGEM QLW
Sbjct: 565 AGYIYLAQPPLYRIAKGKQEKYAYTEEEMKEILQEMGEKGV-NVQRYKGLGEMNASQLWA 623
Query: 569 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 618
TT++PE R+LK++VIEDAA AN +F LMG V R++ I+ +A + NLD
Sbjct: 624 TTMDPETRVLKRVVIEDAAYANEIFEKLMGDDVTARRDFIKRHAKEVTNLD 674
>gi|289523899|ref|ZP_06440753.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502555|gb|EFD23719.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 645
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 437/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DNA+DEA AGY + V + D SVSV DNGRGIP+D HP
Sbjct: 39 MYIGDTGIRGLHHLVYEVVDNAIDEAMAGYCDQVSVIVYPDGSVSVEDNGRGIPVDTHPK 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NK A E VLT+LHAGGKF + Y VSGGLHGVG+SVVNALS LE+ +WRDGME+HQ
Sbjct: 99 VNKPAAEVVLTILHAGGKF--DNKAYQVSGGLHGVGVSVVNALSTWLELIIWRDGMEWHQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG P C + PV DR GT++ F PD +F F + ++ R+RE+AFL P
Sbjct: 157 RYSRGVP----QCELTPVGKADRTGTKVHFLPDDTIFEEK-DFSFDVLSSRLREIAFLVP 211
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I L+ D N+ + + GG+ +V++LN DK PL + + + + D + +++A
Sbjct: 212 GLKIDLK----DLRNNKSVAFKYDGGVISFVEYLNRDKNPLFKEPIYIKGEKDDVLVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D++ + + +AN I T++GGTH+ G + +LTR +N + ++ K +KDKD +LSG+
Sbjct: 268 LQY-NDSFQERVFAFANLIHTVEGGTHVVGFRTALTRAVNEMARRQKLLKDKDANLSGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLT IISV++ P+FEGQTKT+LGN +VR +VD V + L +LE PD L I+ K
Sbjct: 327 LKEGLTAIISVKLKEPQFEGQTKTKLGNSDVRGIVDSIVYDGLMAFLEEKPDCLRPIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+AR+LVR+KS LPGKLADCSS PEE E++IVEGDSAGGSAKQ
Sbjct: 387 AIKARQARDAAKKARELVRRKSAFGGLDLPGKLADCSSKDPEECELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVE+ + N EI+ +I+ALG G+ GEDF LRYH++I
Sbjct: 447 GRNRTFQAILPLRGKILNVEKARLDKVLSNAEIRTIIQALGCGI-GEDFDVNKLRYHRVI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLL FFYR+ + + G +Y+ PPLY+V+ GK YCY D EL+
Sbjct: 506 IMTDADVDGAHIRTLLLAFFYRFMPGIIEGGHLYIAQPPLYRVQAGKSEYYCYSDKELRN 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +N S+QR+KGLGEM P QLW+TT++P +R+LK++ +EDA A+ F+ LMG
Sbjct: 566 MADKL-ANKKISVQRYKGLGEMNPEQLWKTTMDPNERILKRVDVEDALAADEYFTILMGD 624
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I++ AN V NLD
Sbjct: 625 KVEPRREFIESHANEVRNLD 644
>gi|392406420|ref|YP_006443028.1| DNA gyrase subunit B [Anaerobaculum mobile DSM 13181]
gi|390619556|gb|AFM20703.1| DNA gyrase, B subunit [Anaerobaculum mobile DSM 13181]
Length = 645
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/620 (53%), Positives = 440/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DNA+DEA AGY +I V L AD SVSV DNGRGIP+D+HP
Sbjct: 39 MYIGDTGMRGLHHLVYEVVDNAIDEAMAGYCDHIVVTLYADGSVSVEDNGRGIPVDMHPK 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NK A E VLT LHAGGKF + Y VSGGLHGVG+SVVNALS LE+TVWRDG+E+HQ
Sbjct: 99 VNKPAAEVVLTTLHAGGKF--DNKAYQVSGGLHGVGVSVVNALSSWLELTVWRDGIEWHQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG P + L V +R GT++ F PD +F F + ++ R+RE+AFL P
Sbjct: 157 RYSRGVPQSELKA----VGKAERTGTKVHFMPDDAIFEER-DFSFDVLSARLREIAFLVP 211
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+TI L+ D + N+ + + GG+ +V++LN DK L + + + DG+ +++A
Sbjct: 212 GITIELK----DLKSNKSMTFRYEGGVVSFVKYLNRDKIALFAEPIYISGEKDGVLVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D++ + + +AN I T++GGTH+ G + +LTR +N + ++ K +KDKD +LSG+
Sbjct: 268 LQY-NDSFQERVFAFANLIHTVEGGTHVIGFRTALTRAINEMARRQKLLKDKDPNLSGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLT IISV++ P+FEGQTKTRLGN +VR +VD V + L LE PD L I+ K
Sbjct: 327 LKEGLTAIISVKLKEPQFEGQTKTRLGNSDVRGIVDSIVYDELMATLEEKPDYLRPIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+AR+LVR+KS LPGKLADCSS PEE EI+IVEGDSAGGSAKQ
Sbjct: 387 AIKARQARDAAKKARELVRRKSAFGGLDLPGKLADCSSKDPEECEIYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVE+ + N EI+ +I+ALG G+ GEDF LRYH++I
Sbjct: 447 GRNRTFQAILPLRGKILNVEKARLDKVLSNAEIRTIIQALGCGI-GEDFDISKLRYHRVI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLL FFYR+ + +EG +Y+ PPLY+V+ GK+ YCY D EL+
Sbjct: 506 IMTDADVDGAHIRTLLLAFFYRFMPRIIEEGHLYIAQPPLYRVQVGKKEYYCYSDKELRN 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S+ ++QR+KGLGEM P QLW+TT++P +R+LK++ IEDA A+ F+ LMG
Sbjct: 566 LMERL-SDKKATVQRYKGLGEMNPEQLWKTTMDPNERILKRVDIEDALAADEYFTILMGD 624
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ AN V NLD
Sbjct: 625 KVEPRREFIEAHANEVRNLD 644
>gi|374307331|ref|YP_005053762.1| DNA gyrase subunit B [Filifactor alocis ATCC 35896]
gi|291165885|gb|EFE27932.1| DNA gyrase, B subunit [Filifactor alocis ATCC 35896]
Length = 638
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/620 (54%), Positives = 437/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AG+ I VA+ N++ V D+GRGIP ++HP
Sbjct: 31 MYIGSTGAKGLHHLVYEVVDNAIDEALAGFCKTIYVAIEEGNAIRVIDDGRGIPTEVHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS VTV R G Y Q
Sbjct: 91 TGKSTVETVLTVLHAGGKFG--TGGYKVSGGLHGVGVSVVNALSTFFRVTVKRGGKIYVQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+G T L V + GT + F PD ++F +++ + T+ R+RELAFLN
Sbjct: 149 EFSKGISETELQ----EVGVTEETGTMVEFQPDAEIFD-ELEYRYETLEYRLRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
++I L ED + Q E+ + GGL+E+V +LN +K PLH DV+ F K +D +++A
Sbjct: 204 GISIVL--EDKRAGQEQKKEFSYLGGLKEFVVFLNKNKTPLHKDVIHFEKQIDEYYLEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +DAY + + +AN+I TI+GG H+ G K +LTRT+N KKS K+K+ SLSGE
Sbjct: 262 IQY-TDAYIENIYSFANNINTIEGGMHLIGFKTALTRTINDYLKKSN--KNKEESLSGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS+++P P++EGQTKT+LGNP+VR VVD + EY YLE +P V I+ K
Sbjct: 319 VREGLTAIISIKLPEPQYEGQTKTKLGNPQVRSVVDSFLAEYFGAYLEENPQVAKIIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A A AAKRARDL R+K VL S+SLPGKLADCS P SEI+IVEGDSAGGSAKQ
Sbjct: 379 AMNARSAREAAKRARDLTRRKGVLDSTSLPGKLADCSERDPALSEIYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+ QAILPLRGKILNVE+ + +EEI+N+I A G + GE+F + LRYHKI+
Sbjct: 439 GRDRKTQAILPLRGKILNVEKSRLDRILTSEEIKNMITAFGCSI-GEEFDESKLRYHKIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +RY K L + G +Y+ PPL+K+ RGK+ Y Y++ EL
Sbjct: 498 IMTDADVDGAHIRTLLLTFMFRYMKPLIENGYVYIAQPPLFKIHRGKKEVYAYNEKELPA 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ F IQR+KGLGEM P QLWETT+NP+ R L ++ +ED + A+ FS LMG
Sbjct: 558 ILQEFGEGHKPGIQRYKGLGEMNPEQLWETTMNPDTRTLLRVTVEDFSGADDTFSMLMGD 617
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I N A V NLD
Sbjct: 618 KVEPRREFIHNNAQYVKNLD 637
>gi|335039151|ref|ZP_08532333.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
gi|334180961|gb|EGL83544.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
Length = 637
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 433/619 (69%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHH+V+EI+DN+VDEA AG+ + I V + DNSV+V+DNGRGIP+ +H
Sbjct: 28 MYIGSTSSKGLHHMVWEIVDNSVDEALAGFCTEIHVTVHEDNSVTVSDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG GY VSGGLHGVG SVVNALSE LEV V RDG Y+Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFGGE--GYKVSGGLHGVGASVVNALSEWLEVKVHRDGHIYYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + R GT I F PD ++F +FD+ T+ R+RE+AFLN
Sbjct: 146 RYRRGVPEFDLKV----IGQTARTGTTITFKPDPEIFEETTEFDYETLRNRLREIAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L I + D E+ Q + + + GG+ +V+++N ++ LH+ + + +G+ +++AL
Sbjct: 202 GLKIIFK--DERMEQAQPDIFVYEGGIASFVEYINRAREVLHEPIYIEDEKEGVYVEIAL 259
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D+++ + +AN+I T +GGTH G K++LTR +N G+K +K+ D +L+G+ V
Sbjct: 260 QY-NDSFASNLFSFANNIHTYEGGTHESGFKSALTRVINEYGRKQGLIKETDNNLTGDDV 318
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT +ISV++P+P+FEGQTKT+LGN EVR + + ++ +L +P V IL K+
Sbjct: 319 REGLTAVISVKIPDPQFEGQTKTKLGNSEVRGITENVFAKHFFTFLNENPSVAKKILEKA 378
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A AAK+AR+L R+K+ L SSLPGKLADCSS P SE++IVEGDSAGGSAKQG
Sbjct: 379 LMAQRAREAAKKARELTRRKNALEVSSLPGKLADCSSRDPSISELYIVEGDSAGGSAKQG 438
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ G++F RYHK+II
Sbjct: 439 RDRHFQAILPLRGKIINVEKARLDKILSNNEIRAIITALGTGI-GDEFDINKARYHKVII 497
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPLYK+ +GK+V Y Y D EL++
Sbjct: 498 MTDADVDGAHIRTLLLTFFYRYMKPLIERGYVYIAQPPLYKITQGKKVLYAYSDRELERK 557
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
P N +IQR+KGLGEM P QLWETT++PE R L Q+ + DA EA+ +F +LMG +
Sbjct: 558 LKELPDNPKPTIQRYKGLGEMNPTQLWETTMDPESRTLLQVSLTDAVEADAIFETLMGDQ 617
Query: 601 VDTRKELIQNAANLV-NLD 618
V+ R+E IQ A V NLD
Sbjct: 618 VEPRREFIQQHAKYVRNLD 636
>gi|160331171|ref|XP_001712293.1| gyrB [Hemiselmis andersenii]
gi|159765740|gb|ABW97968.1| gyrB [Hemiselmis andersenii]
Length = 688
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/629 (53%), Positives = 443/629 (70%), Gaps = 16/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
++IGSTG +GLHHL YEI+DN+VDEA G+ +I ++L ++++++ D GRGIPID HP
Sbjct: 67 VFIGSTGTKGLHHLAYEIIDNSVDEALGGFCDDILISLNDNSTLTIKDKGRGIPIDTHPV 126
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K+ALETV+T+LHAGGK GY VSGGLHGVG+SVVNALSE L + R
Sbjct: 127 TGKTALETVMTILHAGGK--FGGGGYKVSGGLHGVGVSVVNALSEFLHINTRRLEKGCSM 184
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK + + + K++ GT + F PD Q+F++ +D + GR+ ELAFLN
Sbjct: 185 RFVRGKTIGEIKAKKRNFNFKNKNGTSVNFKPDFQIFSSTFIYDPFILGGRLNELAFLNS 244
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA--GGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
L + L+ D K NE F GG+ EY+ L+ K PLH + K++ GI++ +
Sbjct: 245 NLKLILQ----DRRKKNINESIFVHNGGISEYIFSLSKKKTPLHKTISIEKELKGISVQV 300
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQW +D + +L +AN+IRTI+GGTH++ +K +TRTLN G+K+ KD +LSGE
Sbjct: 301 ALQWTTDHSQENILSFANNIRTIEGGTHLDSLKIVITRTLNFFGRKTGKFKDNFRNLSGE 360
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH-PDVLDSIL 357
+REGLT IISV++P PEFEGQTK++LGNP+VR +VD V +YL + E D SIL
Sbjct: 361 FIREGLTGIISVKIPEPEFEGQTKSKLGNPDVRSIVDTIVSDYLKNFFETQGKDACLSIL 420
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A +A+ AAK+AR+LVR+KSVL ++LPGKLADCS P +SEIFIVEGDSAGGSA
Sbjct: 421 EKAIEAYQASEAAKKARELVRRKSVLEFTTLPGKLADCSLKDPNKSEIFIVEGDSAGGSA 480
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ RDR FQAILPLRGKI+N+E+ DE +YKN EIQ LI ALGLG K E+F LRY +
Sbjct: 481 KQARDRMFQAILPLRGKIINIEKTDETRIYKNTEIQALISALGLGTKKENFDINRLRYRR 540
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-GKQVQ----YCY 532
III+TDADVDGAHIRTLLLTFFYRYQK L ++G +Y+ PPLYK+E GK +Q YCY
Sbjct: 541 IIIMTDADVDGAHIRTLLLTFFYRYQKKLIEKGLVYIACPPLYKIEETGKNLQNFKNYCY 600
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
DAEL+ S ++QRFKGLGEMMP QLWETT++PE+R+LK++ + D +AN +
Sbjct: 601 SDAELEFSLSKHIKK--LNVQRFKGLGEMMPEQLWETTMDPEKRVLKRVEVSDIEKANKI 658
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLD 621
F+ LMG +V RKE IQ A+ +NL+++D
Sbjct: 659 FNVLMGDKVFARKEFIQIHADKMNLENID 687
>gi|403252574|ref|ZP_10918883.1| DNA gyrase subunit B [Thermotoga sp. EMP]
gi|402812064|gb|EJX26544.1| DNA gyrase subunit B [Thermotoga sp. EMP]
Length = 636
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/630 (52%), Positives = 444/630 (70%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L D SV + DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHEDGSVEIEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------D 232
L I E D + + F GG+ EYV++LN KK LHDV+ ++ D
Sbjct: 197 GLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD
Sbjct: 253 EVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KD 310
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S GE VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P++
Sbjct: 311 DSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPEL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDS
Sbjct: 371 VKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTNREKTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 431 AGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G IY+ +PPLY+++ GK+ Y Y
Sbjct: 490 LRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRIYIALPPLYRIKAGKEEFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|1622792|gb|AAC44498.1| DNA topoisomerase II subunit B [Thermotoga maritima MSB8]
Length = 636
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/630 (52%), Positives = 444/630 (70%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHEDGSVEVEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPMEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------D 232
L I E D + + F GG+ EYV++LN KK LHDV+ ++ D
Sbjct: 197 GLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD
Sbjct: 253 EVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KD 310
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S GE VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P++
Sbjct: 311 DSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPEL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDS
Sbjct: 371 VKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 431 AGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y
Sbjct: 490 LRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|15643596|ref|NP_228642.1| DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|418044997|ref|ZP_12683093.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
gi|6831559|sp|P77993.2|GYRB_THEMA RecName: Full=DNA gyrase subunit B; AltName: Full=Topoisomerase II
subunit B
gi|4981365|gb|AAD35915.1|AE001750_9 DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|351678079|gb|EHA61226.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
Length = 636
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/630 (52%), Positives = 444/630 (70%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHEDGSVEVEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------D 232
L I E D + + F GG+ EYV++LN KK LHDV+ ++ D
Sbjct: 197 GLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD
Sbjct: 253 EVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KD 310
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S GE VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P++
Sbjct: 311 DSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPEL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDS
Sbjct: 371 VKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 431 AGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y
Sbjct: 490 LRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|357419158|ref|YP_004932150.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
gi|355396624|gb|AER66053.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
Length = 635
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 433/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHHLVYE++DN+VDEA AG+ + IEV + D VSV DNGRGIPID HP
Sbjct: 28 MYIGDTTTRGLHHLVYEVVDNSVDEALAGWCNRIEVIIHEDGHVSVEDNGRGIPIDPHPI 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K A E VLT LHAGGKF Y VSGGLHGVG+SVVNALSE L +TVWRDG E+ Q
Sbjct: 88 TGKPAAEVVLTTLHAGGKF--DKKAYQVSGGLHGVGVSVVNALSEWLNLTVWRDGREWRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKPV+ L C +S +++GT I F PD ++F F + ++ R RE+AFLNP
Sbjct: 146 SYRRGKPVSELCCG----ESTNKRGTLIEFKPDGEIFEETT-FSWDILSSRFREMAFLNP 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI L+ S EK + + GG+ +V++LN K PL V + + DG+++++
Sbjct: 201 GLTIILKDRISGKEKT----FHYEGGISSFVEYLNKGKNPLFTPPVVVKGEKDGVSVEIG 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + +AN I T++GGTH+ G + +LTR +N + +++K +KDKD +LSG+
Sbjct: 257 LQY-NDSYLERVFAFANLIHTVEGGTHVSGFRTALTRAINEMARRNKLLKDKDPNLSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLT +ISV++P P+FEGQTKT+LGN E++ +VD + L ++ P++L ++ K
Sbjct: 316 LKEGLTAVISVKLPEPQFEGQTKTKLGNGEIKGIVDSIFYDGLMVEIDERPEILKPVVEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A A AAK+AR+LVR+K+ L LPGKLADCSS PEESE+FIVEGDSAGGSAKQ
Sbjct: 376 AIKARLAREAAKKARELVRRKTALAGLDLPGKLADCSSRNPEESELFIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I+ALG G+ GEDF LRYH+I
Sbjct: 436 GRDRHFQAILPLRGKILNVEKARMDKVLDNNEVRTIIQALGTGI-GEDFDISKLRYHRIF 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLT FYR+ L + G +Y+ PPLY+V+ GK++ YC+ D EL
Sbjct: 495 LMTDADVDGSHIRTLLLTLFYRFMPELIERGHLYIAQPPLYRVQIGKEIHYCFSDKELNN 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ +IQR+KGLGEM P QLWETT++P R+ K++ IEDA A+ FS LMG
Sbjct: 555 LRQKVGDGKKLNIQRYKGLGEMNPSQLWETTMDPATRVCKRIEIEDAVAADEYFSILMGD 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 615 KVEPRREFIEAHAREVRNLD 634
>gi|170287901|ref|YP_001738139.1| DNA gyrase subunit B [Thermotoga sp. RQ2]
gi|170175404|gb|ACB08456.1| DNA gyrase, B subunit [Thermotoga sp. RQ2]
Length = 636
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/630 (52%), Positives = 443/630 (70%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDE AGY I V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDEVLAGYCDWIRVTLHEDGSVEVEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------D 232
L I E D + + F GG+ EYV++LN KK LHDV+ ++ D
Sbjct: 197 GLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD
Sbjct: 253 EVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KD 310
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S GE VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P++
Sbjct: 311 DSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPEL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDS
Sbjct: 371 VKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 431 AGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y
Sbjct: 490 LRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|148269239|ref|YP_001243699.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
gi|147734783|gb|ABQ46123.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
Length = 636
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/630 (52%), Positives = 443/630 (70%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY+GSTG RGLHHLVYE++DN+VDEA AGY I V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYVGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHEDGSVEVEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDVLEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------D 232
L I E D + + F GG+ EYV++LN KK LHDV+ ++ D
Sbjct: 197 GLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD
Sbjct: 253 EVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KD 310
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S GE VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + + D+
Sbjct: 311 DSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANSDL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDS
Sbjct: 371 VKAILSKIMSTKQAREAAKRAREMVRRKNVLQNTALPGKLADCSSTHREKTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 431 AGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y
Sbjct: 490 LRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDQELAEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|294102629|ref|YP_003554487.1| DNA gyrase subunit B [Aminobacterium colombiense DSM 12261]
gi|293617609|gb|ADE57763.1| DNA gyrase, B subunit [Aminobacterium colombiense DSM 12261]
Length = 634
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 442/620 (71%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TGPRGLHHLVYE++DN++DEA AGY I V + D SVSVADNGRGIP + HP+
Sbjct: 28 MYIGDTGPRGLHHLVYEVVDNSIDEAIAGYCDKISVVIYEDESVSVADNGRGIPTEPHPS 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ + A E VLT+LHAGGKF + Y VSGGLHGVG+SVVNALSE LE+T+ R+G+ Q
Sbjct: 88 SGRPASEVVLTILHAGGKF--DNQAYKVSGGLHGVGVSVVNALSEWLEITIQRNGLSRTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PVT L+ + + GT +RF PD +F ++F + ++GR+RE+AFLNP
Sbjct: 146 RFERGVPVTDLS----EGEPSTKTGTYVRFHPDTTIFE-EVRFSADILSGRLREMAFLNP 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L D + E+ + GG++ ++++LN K PL + + + DG ++++
Sbjct: 201 GLAITL----EDHRSGKCVEFHYEGGIKTFIEYLNKGKTPLFPEPIVIAGEKDGASVEIG 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + +AN I TI+GGTH+ G + +LTR +N + +++K +++KD +LSGE
Sbjct: 257 IQY-NDGYLERIFAFANMIHTIEGGTHVAGFRTALTRAVNEVARRAKILREKDENLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLTC++S+++ NP+FEGQTKT+LGN E++ + D V E L YL+ H +VL ++ K
Sbjct: 316 LKEGLTCVLSIKLSNPQFEGQTKTKLGNSEIKGITDSVVYEGLLAYLDEHQEVLKPVVEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+AR+LVR K+ + +LPGKLADCSS P E++IVEGDSAGGSAKQ
Sbjct: 376 AIRARQARDAAKKARELVR-KTAMTGMNLPGKLADCSSRDPHVCEVYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I+ALG G+ GEDF LRY+KII
Sbjct: 435 GRDRGFQAILPLRGKILNVEKARFDKVLSNNEIRTIIQALGCGI-GEDFDHSKLRYNKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTFFYRY + L D+G +Y+ PPLY+V+RGK V YCY + EL+
Sbjct: 494 IMTDADVDGAHISTLLLTFFYRYMQDLIDKGHLYLAQPPLYRVQRGKNVTYCYSEKELRD 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S P + S+QR+KGLGEM P QLWETT++P+ R+LK++ +EDA A+ FS LMG
Sbjct: 554 IVDSTPDSRRASVQRYKGLGEMNPDQLWETTMDPQNRVLKRIEVEDAMLADEYFSILMGD 613
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I A+ V NLD
Sbjct: 614 KVEPRRDFIAAHAHEVRNLD 633
>gi|345304552|ref|YP_004826454.1| DNA gyrase subunit B [Rhodothermus marinus SG0.5JP17-172]
gi|345113785|gb|AEN74617.1| DNA gyrase, B subunit [Rhodothermus marinus SG0.5JP17-172]
Length = 649
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/625 (51%), Positives = 438/625 (70%), Gaps = 14/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DNA+DEA AGY I V + D S++V DNGRGIP+D HP
Sbjct: 31 MYIGDVGIRGLHHLVYEVVDNAIDEAMAGYCDRIAVTINEDGSITVEDNGRGIPVDEHPT 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+T LHAGGKF ++ Y VSGGLHGVG+S VNALS L TV RDG + Q
Sbjct: 91 EKRSALEVVMTTLHAGGKFDKNT--YKVSGGLHGVGVSCVNALSRKLIATVKRDGYVWRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+ GKP T+ V P+ + GT ++FWPD +F T ++F +T+A R+RELA+LN
Sbjct: 149 TYAYGKP-TSPVERVRPMREDEETGTIVQFWPDPTIFKT-VEFRFDTLAERLRELAYLNR 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I++ + E +Y EY+F GGL E+VQ+L+ + P+HD V+ + D + +++A
Sbjct: 207 GVRISIEDRREEDESLRYEEYYFEGGLVEFVQYLDETRTPIHDEVIYIAGEADDVVVEVA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L++ +D Y++ +L + N+I T +GGTH+ G + +LTRTL + +K+ +K+ LSGE
Sbjct: 267 LRY-NDGYAENVLSFVNNINTHEGGTHVAGFRTALTRTLKAYAEKNNLLKNFKGELSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT +ISV+VP P+FEGQTKT+LGN EV+ +V V E+L+ +LE HP IL K
Sbjct: 326 FREGLTAVISVKVPEPQFEGQTKTKLGNSEVQGIVAGIVSEHLSRWLEDHPREARRILDK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AA++AR+LV++K+ L SSLPGKLADC+S P + E+F+VEGDSAGGSAKQ
Sbjct: 386 VILAAQARVAARKARELVQRKNALNGSSLPGKLADCASRDPSKCELFLVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHK 477
R+R FQAILPLRGKILNVE+ + +NEEI+N++ ALG G+ EDF LRYH+
Sbjct: 446 ARNREFQAILPLRGKILNVEKARLDKILENEEIRNIVTALGTGLATTEEDFDLSKLRYHR 505
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDGAHIRTLLLTFFYR + L + G IY+ +PPLY+V+ GK +Y + D EL
Sbjct: 506 IIIMTDADVDGAHIRTLLLTFFYRQLRPLVEGGYIYIALPPLYRVKVGKTERYAWSDEEL 565
Query: 538 KKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+++ P A+ IQR+KGLGEM P QLWETT+NPE R+L+Q+ +EDAA A+ +F
Sbjct: 566 RQIVEELTDGQPQRAV--IQRYKGLGEMNPEQLWETTMNPETRILQQVTVEDAAAADRIF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V+ R++ I+ A LD
Sbjct: 624 SILMGDAVEPRRKFIERNARYATLD 648
>gi|268318257|ref|YP_003291976.1| DNA gyrase subunit B [Rhodothermus marinus DSM 4252]
gi|262335791|gb|ACY49588.1| DNA gyrase, B subunit [Rhodothermus marinus DSM 4252]
Length = 649
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/625 (51%), Positives = 438/625 (70%), Gaps = 14/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DNA+DEA AGY I V + D S++V DNGRGIP+D HP
Sbjct: 31 MYIGDVGIRGLHHLVYEVVDNAIDEAMAGYCDRIAVTINEDGSITVEDNGRGIPVDEHPT 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+T LHAGGKF S+ Y VSGGLHGVG+S VNALS L TV RDG + Q
Sbjct: 91 EKRSALEVVMTTLHAGGKFDKST--YKVSGGLHGVGVSCVNALSRKLIATVKRDGYVWRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+ GKP T+ V P+ + GT ++FWPD +F T ++F +T+A R+RELA+LN
Sbjct: 149 TYAYGKP-TSPVERVRPMREDEETGTIVQFWPDPTIFKT-VEFRFDTLAERLRELAYLNR 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I++ + E +Y EY+F GGL E+VQ+L+ + P+HD V+ + D + +++A
Sbjct: 207 GVRISIEDRREEDESLRYEEYYFEGGLVEFVQYLDETRTPIHDEVIYIAGEADDVVVEVA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L++ +D Y++ +L + N+I T +GGTH+ G + +LTRTL + +K+ +K+ LSGE
Sbjct: 267 LRY-NDGYAENVLSFVNNINTHEGGTHVAGFRTALTRTLKAYAEKNNLLKNFKGELSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT +ISV+VP P+FEGQTKT+LGN EV+ +V V E+L+ +LE HP IL K
Sbjct: 326 FREGLTAVISVKVPEPQFEGQTKTKLGNSEVQGIVAGIVSEHLSRWLEDHPREARRILDK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AA++AR+LV++K+ L SSLPGKLADC+S P + E+F+VEGDSAGGSAKQ
Sbjct: 386 VILAAQARVAARKARELVQRKNALNGSSLPGKLADCASRDPSKCELFLVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHK 477
R+R FQAILPLRGKILNVE+ + +N+EI+N++ ALG G+ EDF LRYH+
Sbjct: 446 ARNREFQAILPLRGKILNVEKARLDKILENDEIRNIVTALGTGLATTEEDFDLSKLRYHR 505
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDGAHIRTLLLTFFYR + L + G IY+ +PPLY+V+ GK +Y + D EL
Sbjct: 506 IIIMTDADVDGAHIRTLLLTFFYRQLRPLVEGGYIYIALPPLYRVKVGKTERYAWSDEEL 565
Query: 538 KKVKSSF----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+++ P A+ IQR+KGLGEM P QLWETT+NPE R+L+Q+ +EDAA A+ +F
Sbjct: 566 RQIVEELTDGQPQRAV--IQRYKGLGEMNPEQLWETTMNPETRILQQVTVEDAAAADRIF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V+ R++ I+ A LD
Sbjct: 624 SILMGDAVEPRRKFIERNARYATLD 648
>gi|408355369|ref|YP_006843900.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
gi|407726140|dbj|BAM46138.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
Length = 640
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 317/619 (51%), Positives = 429/619 (69%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGY I+V + DNS++V DNGRGIP+ +H
Sbjct: 31 MYIGSTSSRGLHHLVWEIVDNSIDEALAGYCDEIQVTIEEDNSITVTDNGRGIPVGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++T LHAGGKF +SGY VSGGLHGVG SVVNALS SL+V V RD Y+
Sbjct: 91 TGRPAVEVIMTELHAGGKF--DNSGYKVSGGLHGVGASVVNALSTSLKVYVHRDNNIYYL 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG L + + D GT+I F PD +FT +FD+ T+ RIRELAFLN
Sbjct: 149 DFKRG----VLNTEIKVIGQTDTTGTKIHFSPDPDIFTETTEFDYETLLYRIRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+ I++ ED K + +++ GG++EYV+++N K+ LH+ K+ + I +++AL
Sbjct: 205 KIKISI--EDKRKGKERKQTFYYEGGIKEYVEYMNRSKEVLHETFFAEKEEEDIIVEVAL 262
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ S YS + +AN+I T +GG H G K +LTR +N +K+K KD D +L+G+ V
Sbjct: 263 QYNS-GYSSNIYSFANNIHTHEGGMHESGFKTALTRVINDYARKTKIFKDNDENLTGDDV 321
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+T I+S++ P+P+FEGQTKT+LGN E R + D + E ++L +PD I++K
Sbjct: 322 REGITAIVSIKHPDPQFEGQTKTKLGNSEARTITDSAFSEMFYKFLVENPDTAKIIVNKG 381
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ A +A +AAK+AR+L R+K L SSLPGKLADCSS SE++IVEGDSAGGSAKQG
Sbjct: 382 VMASRARMAAKKARELTRRKGALEISSLPGKLADCSSRDASISELYIVEGDSAGGSAKQG 441
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N EI+++I A+G G+ GE+F RYHK++I
Sbjct: 442 RDRHFQAILPLRGKILNVEKARLDRILSNNEIRSMITAMGTGI-GEEFDITKARYHKVVI 500
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYR+ + L +EG IY+ PPLYKV++GK ++Y YDD+EL+ +
Sbjct: 501 MTDADVDGAHIRTLLLTFFYRFMRPLIEEGYIYIAQPPLYKVQQGKTIRYAYDDSELELI 560
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
P +QR+KGLGEM QLWETT++PE R L Q+ + DA EA+ +F LMG +
Sbjct: 561 LRELPKQPKPGLQRYKGLGEMNAEQLWETTMDPENRTLLQVKLNDAIEADQIFDMLMGDK 620
Query: 601 VDTRKELIQ-NAANLVNLD 618
V+ R+E IQ NA + NLD
Sbjct: 621 VEPRREFIQENAVYVKNLD 639
>gi|114565581|ref|YP_752735.1| DNA topoisomerase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336516|gb|ABI67364.1| DNA gyrase subunit B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 633
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 441/620 (71%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AG+ IEV + DNS++V D+GRGIP+D+HPA
Sbjct: 26 MYIGSTGPKGLHHLVFEIVDNSIDEAVAGFCKKIEVTINQDNSITVCDDGRGIPVDIHPA 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
AL+ +LT LH+GGKFGGS GY++SGGLHGVGLSVVNALS +EV V RDG Y Q
Sbjct: 86 MGIPALQVILTTLHSGGKFGGS--GYNISGGLHGVGLSVVNALSRRMEVRVKRDGHIYQQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV + + GT I F+ D ++F I F+ + R+REL+FLN
Sbjct: 144 DYERGNPVNEIRI----IGESKETGTSICFFADDEIFEE-INFEREILLQRLRELSFLNR 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I+LR D E+ Y E+ ++ GL+++V ++N +K+ ++D + F D + + +A
Sbjct: 199 NLKISLR--DEREEEVFYQEFHYSHGLKDFVAYINKNKEVINDNPIYFENKKDDVIVQVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +++YS+ + +AN+IRT +GGTH G K +LTR +N KK+ +K+ D +LSGE
Sbjct: 257 IQY-NNSYSENLYSFANNIRTQEGGTHEIGFKNALTRVINDYAKKNNILKENDNNLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IISV V +P+FEGQTKT+LGN +R +V+ V E++ +YL +P +L K
Sbjct: 316 IREGIAAIISVLVKDPQFEGQTKTKLGNTYIRGIVESIVFEHVEDYLNENPAAARKLLDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++SA +A AAK+AR+L R+K+ L S++LPGKLADCS+ P ESE+FIVEGDSAGGSAKQ
Sbjct: 376 AISARRAREAAKKARELTRRKNALESTALPGKLADCSNKNPAESELFIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR +QAILPLRGKILNVE+ + +EEI+NLI A+G G+ GEDF + RYHK+
Sbjct: 436 GRDRTYQAILPLRGKILNVEKARLDRVLSSEEIRNLITAMGTGI-GEDFDIKKARYHKLF 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIR LLLTFFYRY K L +EG +Y+ PPLY ++RGK+++Y Y+DA+L
Sbjct: 495 IMTDADVDGSHIRVLLLTFFYRYMKELIEEGYLYIAQPPLYGLKRGKEIKYFYNDADLNA 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
S + +SIQR+KGLGEM P QLW TT++ E R + ++ IEDA +AN +FS+LMG
Sbjct: 555 FLSQ--TEQKWSIQRYKGLGEMDPEQLWTTTMDAESRTVLKVTIEDAIKANDIFSALMGD 612
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V R+E I+ NA + NLD
Sbjct: 613 NVQPRREFIESNARYVANLD 632
>gi|451342761|ref|ZP_21911844.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
gi|449338492|gb|EMD17637.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
Length = 641
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 326/621 (52%), Positives = 436/621 (70%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN++DEA AG+ S I+V++L DN + V DNGRG+P +
Sbjct: 30 MYIGTTSSRGLHHLVWEIVDNSIDEALAGFCSEIKVSILKDNIIKVVDNGRGMPTGTNTK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ET+ TVLHAGGKFG GY VSGGLHGVG SVVNALSE LEV V RDG Y+Q
Sbjct: 90 TGLSTVETIFTVLHAGGKFG--EGGYKVSGGLHGVGASVVNALSEYLEVYVHRDGHIYYQ 147
Query: 121 KYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G KPV TL+ + D +D GT + F D +FT +D + + R+RELAFLN
Sbjct: 148 RFEDGGKPVNTLS---IIGDCED-TGTTVLFKADPAIFTETTIYDFDILNQRVRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
L + + D EK + N Y + GGL EYV +LN +K LHD ++ + +DGI++++
Sbjct: 204 KGLKLII--ADEREEKIKENIYHYEGGLREYVAYLNKNKTALHDEIIDCEETIDGISVEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D+Y + +AN+I TI+GG H EG +A+LTR +N+ G+ S +K+KD +LSGE
Sbjct: 262 AMQY-NDSYQSNIYSFANNIHTIEGGMHEEGFRAALTRVINNYGRTSGALKEKDENLSGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT IISV+ PNP+FEGQTKT+LGN EVRK+ L ++L +PDV I+
Sbjct: 321 DCREGLTAIISVKHPNPQFEGQTKTKLGNAEVRKISRTIFANALDKFLMENPDVAKIIMD 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K A KA +AAKRAR++ R+K+ L + LPGKLADCSS P E EI+IVEGDSAGGSAK
Sbjct: 381 KVTLASKARMAAKRAREMTRRKTALDIADLPGKLADCSSKDPSECEIYIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR QAILPLRGKILNVE+ + N EI+++I A G G+ GE+F + LRYHKI
Sbjct: 441 SGRDRRTQAILPLRGKILNVEKARLERILSNAEIRSMITAFGTGI-GEEFSLDKLRYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG HIR L+LTF YRY + L +EG +Y PPLY + +GK+ Y Y D EL+
Sbjct: 500 VIMTDADVDGGHIRILMLTFLYRYLRPLIEEGYVYAAQPPLYLLRQGKEDHYLYSDYELE 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K++ +A Y+IQR+KGLGEM P QLW+TT+NPE R+L ++ ++DA EA+++F LMG
Sbjct: 560 KLREELGKDAKYNIQRYKGLGEMNPEQLWDTTMNPEHRILNRINVDDAMEADLLFDMLMG 619
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA + NLD
Sbjct: 620 EKVEPRRDFIRENAKYVENLD 640
>gi|269791748|ref|YP_003316652.1| DNA gyrase subunit B [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099383|gb|ACZ18370.1| DNA gyrase, B subunit [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 636
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 433/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DNA+DEA AG+ ++V + D SVSV DNGRGIP ++HP
Sbjct: 28 MYIGDQGQRGLHHLVYEVVDNAIDEAMAGFCDTVQVTVHPDGSVSVEDNGRGIPTEMHPT 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A E VLTVLHAG KF Y VSGGLHGVG+SVVNALSE LEVT+WR+G E+ Q
Sbjct: 88 MGRPAAEVVLTVLHAGAKF--DKKAYQVSGGLHGVGVSVVNALSEWLEVTIWRNGKEHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + DR+GT++ F PD ++F+T ++F +T+ GR+RELAFLNP
Sbjct: 146 SYRRGVPVTDLIAG----EDTDRRGTKVHFMPDGEIFST-LEFSADTLIGRLRELAFLNP 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+TI R DP + + F GG+ +V++LN K+ L + + + DG+ +++A
Sbjct: 201 GVTIVFRDLRQDPPMER--KLHFEGGIRSFVEYLNRGKEVLFSPPMVVKGEKDGVIVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y + + +AN I T++GGTH+ G + +LTR +N +K K +KDKD + +G+
Sbjct: 259 LQY-NDTYLERIFAFANLINTVEGGTHVSGFRTALTRLINDQARKEKLLKDKDPNFTGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLT +ISV++ P+FEGQTKT+LGN +V+ +VD V E L LE P +L ++ K
Sbjct: 318 LKEGLTAVISVKLLEPQFEGQTKTKLGNGDVKGIVDSVVYEGLKVILEDQPQILRPVVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+ARDLVR+KS + LPGKLADCS+ PEE E++IVEGDSAGGSAK
Sbjct: 378 AVKARQAREAAKKARDLVRRKSAMSGMDLPGKLADCSNRRPEECELYIVEGDSAGGSAKM 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N++++ +I+ALG GV G++F LRYHKI
Sbjct: 438 GRDRSFQAILPLRGKILNVEKARLDKILSNDQVRTIIQALGCGV-GDEFDYSKLRYHKIF 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++ DADVDGAHIRTLLLT F+RY + + G +YV PPLY+V+ GK V YCY D ELK+
Sbjct: 497 LMADADVDGAHIRTLLLTLFFRYMPQIIENGHLYVAQPPLYRVQEGKNVHYCYSDRELKE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S S+QR+KGLGEM P QLWETT++P R++K++ IEDA A+ +FS LMG
Sbjct: 557 IMQRL-SGRKASVQRYKGLGEMNPEQLWETTMDPANRVIKRVEIEDAVLADELFSVLMGD 615
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+E I+ +A + NLD
Sbjct: 616 AVEPRREFIEAHAKEVRNLD 635
>gi|323450751|gb|EGB06631.1| hypothetical protein AURANDRAFT_29093 [Aureococcus anophagefferens]
Length = 698
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/652 (52%), Positives = 445/652 (68%), Gaps = 43/652 (6%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHL +EILDN++DE AG+A+ + V L AD S +V D+GRGIP DLHP
Sbjct: 58 MYIGSTGPKGLHHLCFEILDNSIDEVMAGHATKVAVELRADGSCAVGDDGRGIPCDLHPQ 117
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALETVL VLHAGGKFGG+ SGY VSGGLHGVGLSVVNALS L+V V RDG
Sbjct: 118 TGKSALETVLCVLHAGGKFGGAESGYRVSGGLHGVGLSVVNALSHQLDVEVTRDGSVASM 177
Query: 121 KYSRGKPVTTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFL 178
+SRG P +T VD+ GTR+ F PD +F + FD++ +A R+ ELAFL
Sbjct: 178 AFSRGTPTGDMT----RVDAAPGAATGTRVVFSPDGDIFEKTV-FDYDVLAARMDELAFL 232
Query: 179 NPKLTIAL----------RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG-- 226
N + ++L +K D P + + GG+ EY +L ++K PLH +G
Sbjct: 233 NAGVELSLTDFREPKKKKKKGDGGPRVDVFRH---DGGISEYADFLTSEKTPLHAALGPS 289
Query: 227 ------------FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASL 274
R DG+ ++ AL+W SDAY++ + +AN IRT DGGTH++G+++ +
Sbjct: 290 VTKGKHTKEAFVARGTKDGVEVECALRWSSDAYAEVTVSFANGIRTADGGTHVDGLRSVV 349
Query: 275 TRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVV 334
R++N+ K+S + K + + GE+VREGLT ++ V VP PEFEGQTKTRLG+P VR+VV
Sbjct: 350 ARSVNAAAKRSPSGKSDNAYVPGEYVREGLTAVLLVNVPEPEFEGQTKTRLGSPGVRQVV 409
Query: 335 DQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLAD 394
D V L + E HP L +I+ K+L+A KAA AAK ARDLVR+KS+L ++ LPGKLAD
Sbjct: 410 DAVVGAALQQLFEWHPQALKAIVDKALAAQKAAGAAKAARDLVRRKSLLATTVLPGKLAD 469
Query: 395 CSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLR----GKILNVERKDEAAMYKNE 450
CS SEIFIVEGDSA GSAKQGRDR QAILPLR GKILNVE+ +Y N
Sbjct: 470 CSLRDAALSEIFIVEGDSAAGSAKQGRDRESQAILPLRAVLRGKILNVEKCAPERIYLNA 529
Query: 451 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 510
E+Q LI ALGLGV+GE+F ++ LRYH+I+I+TDADVDGAHIR L+LTFFYRYQ++L ++G
Sbjct: 530 ELQALISALGLGVRGEEFNRDNLRYHRIVIMTDADVDGAHIRALILTFFYRYQRSLIEDG 589
Query: 511 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 570
+++ PPLYKV RG++ YC+ D +L+ ++ + +IQRFKGLGEMMP QLW TT
Sbjct: 590 HVFIACPPLYKVSRGRKDTYCWSDDDLE---AALAGDGKATIQRFKGLGEMMPNQLWATT 646
Query: 571 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
++P R ++Q+V++DAA+A+ V + LMG V RKE I AN V LD D+
Sbjct: 647 MDPTARKMQQVVVDDAAKADKVITLLMGDSVAERKEYI--VANSVALDAEDL 696
>gi|389574651|ref|ZP_10164711.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
gi|388425773|gb|EIL83598.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
Length = 640
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 326/620 (52%), Positives = 438/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I V + DNS++V DNGRGIP+ +H
Sbjct: 30 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIEKDNSITVKDNGRGIPVGIHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV L + D GT F PD ++FT I+FD++T+A R+RELAFL
Sbjct: 148 QFKRGVPVGDLEV----IGETDVTGTTTHFVPDPEIFTETIEFDYDTLANRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++A
Sbjct: 204 GVNIII--EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE
Sbjct: 262 LQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHKI+
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFTLEKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYVYNDKQLDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGD 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 620 KVEPRRNFIEENAQYVKNLD 639
>gi|222100717|ref|YP_002535285.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
gi|221573107|gb|ACM23919.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
Length = 636
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 333/630 (52%), Positives = 446/630 (70%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDE+ AGY I+V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDESLAGYCDWIKVTLHEDGSVEVEDNGRGIPVDVHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V+RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVYRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTLVEV----IGETDKHGTVVRFKPDPLIFSET-EFDPDILEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK--------DVD 232
L I E D N+ + F GGL+E+V++LN KK LHDV+ ++ D
Sbjct: 197 GLKI----EFEDRINNEKKTFKFDGGLKEFVKYLNRGKKVLHDVIYLKRTEKVKVKDKED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ +L +AN+I+T+DGGTH+ K +LTR +N G+K +K+ D
Sbjct: 253 EVIVEIAFQY-TDSYSEEILSFANTIKTVDGGTHVTAFKTTLTRLMNEYGRKHNFLKNGD 311
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S G+ VREGLT +ISV V NPEFEGQTK++LGN EV++ V+++++E L + + PD+
Sbjct: 312 -SFQGDDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVNRAMREELKKIFDASPDL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AA+RAR++VR+K+VL+S++LPGKLADCSST E +E+FIVEGDS
Sbjct: 371 VRTILSKIMSTKQAREAARRAREMVRRKNVLQSTTLPGKLADCSSTDRENTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF
Sbjct: 431 AGGSAKQARDRVFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDINK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY KIII+TDAD+DGAHIRTLLLT FYRY K L ++G IY+ +PPLY++ GK+ Y Y
Sbjct: 490 LRYGKIIIMTDADIDGAHIRTLLLTLFYRYMKPLIEDGRIYIALPPLYRIRVGKEDFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
DAEL + + F + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDAELMEYRKMFEGKKM-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|219121994|ref|XP_002181340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407326|gb|EEC47263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 727
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 338/642 (52%), Positives = 432/642 (67%), Gaps = 20/642 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP GLHHLV+E++DN VDEA AG+A+ + + AD S++V D+GRGIP DLH
Sbjct: 86 MYIGSTGPDGLHHLVWEVVDNCVDEALAGHATFVTTTIHADGSLTVTDDGRGIPTDLHSE 145
Query: 61 TNKSALETVLTVLHAGGKFG--GSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEY 118
T KSALETVLT LHAGGKF GS+SGY VSGGLHGVG+SVVNALSE + V V R Y
Sbjct: 146 TGKSALETVLTELHAGGKFDNQGSNSGYKVSGGLHGVGISVVNALSEFVHVKVDRTPELY 205
Query: 119 HQKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWPDKQVFT-----TAIQFDHNTIAGR 171
++ RG P L + + SK + GT + F PD +VF I FD + + GR
Sbjct: 206 QMRFERGVPTGPLQNLDKLKTLLSKRKSGTSVTFLPDLKVFKGDNGKPDITFDSSRLKGR 265
Query: 172 IRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG----- 226
+ E+A+LN L + L+ E P + + ++ AGGL EY + L K PL
Sbjct: 266 MDEIAYLNAGLVLTLKDERKSPGRGRLQVFYHAGGLAEYAELLCRTKTPLFQGTTSSRKK 325
Query: 227 --FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK 284
RK D + D AL+W SD Y++++L + N+IRT DGG+H+EG+KA LTRT+N K+
Sbjct: 326 KPARKQKDSASDDDALRWSSDMYAESILSFCNNIRTRDGGSHVEGLKACLTRTVNQAAKR 385
Query: 285 SKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTE 344
S K+ +L GE +REGLT I+SV V PEFEGQTK RLGNPEVR VD + LT+
Sbjct: 386 SNKAKEGAANLPGEFIREGLTAIVSVSVSEPEFEGQTKGRLGNPEVRPAVDSLLSAELTK 445
Query: 345 YLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESE 404
+ P++LD+I +K+ SA AA AAK ARD+VR+K++L S+ LPGKLADC+S PEESE
Sbjct: 446 LFDFRPEILDAIYNKASSAQAAAAAAKAARDMVRRKTLLTSTILPGKLADCASRDPEESE 505
Query: 405 IFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK 464
IFIVEGDSA GSAKQGRDRR QAILPLRGKILN+ER +Y+N E+Q LI ALGLGVK
Sbjct: 506 IFIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIERAATERIYQNTELQGLISALGLGVK 565
Query: 465 GEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE- 523
G +F ++LRY +I+I+TDADVDGAHIR LLLTFFYRYQ+ L + G +Y+ PPLYKV
Sbjct: 566 GSEFDPKSLRYGRIVIMTDADVDGAHIRVLLLTFFYRYQRELVENGHVYIAQPPLYKVSV 625
Query: 524 ---RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 580
R ++ Y ++D E V + S+QRFKGLGEMMP QLW TT++PE+R + Q
Sbjct: 626 GSGRSRKEGYAFNDTERNTVMMQALAAGKVSLQRFKGLGEMMPEQLWSTTMDPERRTMLQ 685
Query: 581 LVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
+ + DA+ A+ S LMG V RKE I A + +D LD+
Sbjct: 686 VTVNDASMADQTLSILMGDTVAPRKEFISTQAETLRVDDLDL 727
>gi|407980739|ref|ZP_11161515.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
gi|407412505|gb|EKF34300.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
Length = 638
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 326/620 (52%), Positives = 437/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I V + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNAKGLHHLVWEIVDNSIDEALAGYCTDITVQIEKDNSITVKDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV L + D GT F PD ++FT +FD++T+A R+RELAFL
Sbjct: 146 QFKRGVPVGDLKV----IGETDVTGTTTHFVPDPEIFTETTEFDYDTLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++A
Sbjct: 202 GVNIVI--EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE
Sbjct: 260 LQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHKI+
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYVYNDKQLDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNASQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGD 617
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 618 KVEPRRNFIEENAQYVKNLD 637
>gi|337744370|ref|YP_004638532.1| protein GyrB [Paenibacillus mucilaginosus KNP414]
gi|386720575|ref|YP_006186900.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
gi|336295559|gb|AEI38662.1| GyrB [Paenibacillus mucilaginosus KNP414]
gi|384087699|gb|AFH59135.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
Length = 637
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 325/620 (52%), Positives = 437/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY + IEV + DNS++V DNGRGIP+ HP
Sbjct: 29 MYIGSTSARGLHHLVWEVVDNSIDEALAGYCTRIEVIVHKDNSITVIDNGRGIPVGEHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS+ LEV V R+G Y Q
Sbjct: 89 LKKSTLEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSKKLEVQVKREGKVYQQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P + + + GT++ FWPD+++FT ++D +T+ RIRELAFLN
Sbjct: 147 EYRCGAP----QYDIKEIGESEMTGTQVTFWPDEEIFTETTEYDFDTLQSRIRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L E +D + + + GG+ +V+ LN +++P+H + + D I +++A
Sbjct: 203 GIEIVLTDERTDISQT----FIYEGGIISFVEHLNQNREPVHQPPIYVEGEKDHIQVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR LN +K +K+ D +LSG+
Sbjct: 259 LQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRILNEYARKYNAIKESDANLSGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P+P+FEGQTKT+LGN EVR +V+ E L E+L+ +P + I+ K
Sbjct: 318 VREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGIVESLFAEKLEEFLQENPAIAKKIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 378 GVQAQRAREAARKARELTRRKSALEVSSLPGKLADCSSKDASISEVYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYHKII
Sbjct: 438 GRDRHFQAILPLRGKILNVEKARLDKILSNAEIRAIITALGTGI-GEDFDISKARYHKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L + G +Y+ PPLYK+ER K ++Y Y+D + +
Sbjct: 497 IMTDADVDGAHIRTLLLTFFFRYMRKLIEAGFVYIAQPPLYKLERNKTIRYAYNDKQREA 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F A ++QR+KGLGEM P QLWETT++P+ R L Q+ I+DA +A+VVF +LMG
Sbjct: 557 IMAEFGEGAKVNVQRYKGLGEMNPGQLWETTMDPDSRTLLQVSIQDAIDADVVFDTLMGD 616
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 617 AVEPRRDFIQLHARYVKNLD 636
>gi|194016365|ref|ZP_03054979.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
gi|194011838|gb|EDW21406.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
Length = 640
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 438/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I V + DNS++V DNGRGIP+ +H
Sbjct: 30 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIEKDNSITVKDNGRGIPVGIHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV L + D GT F PD ++FT I+FD++T+A R+RELAFL
Sbjct: 148 QFKRGVPVGDLEI----IGETDVTGTTTHFVPDTEIFTETIEFDYDTLANRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++A
Sbjct: 204 GVNIVI--EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE
Sbjct: 262 LQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPL+KV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLFKVQQGKRVEYVYNDKQLDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGD 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 620 KVEPRRNFIEENAQYVKNLD 639
>gi|138893684|ref|YP_001124137.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
gi|134265197|gb|ABO65392.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
Length = 640
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 339/623 (54%), Positives = 441/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY + I V + DNS+++ADNGRGIP+D+H A
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTEIHVTIGEDNSITIADNGRGIPVDVHEA 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V+RDG ++Q
Sbjct: 91 TGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSEWLEVYVYRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG+P T L +D DR GT RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 149 KYERGEPRTDLQV----IDETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L E D N+ NEYF+ GG+ YV+ LN ++ LH+ + G R DGI +
Sbjct: 205 GLKITLTDERVD---NRKNEYFYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y+ + + N+I T +GGTH G K +LTR +N +K + KD D +L+
Sbjct: 259 EIALQY-NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKDNDANLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P P+FEGQTKT+LGN + R V D E +L HP V I
Sbjct: 318 GEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLEHPAVARKI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 378 VEKGMMAARARVAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ GEDF RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEDFDISKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 497 KVIIMTDADVDGAHIRTLLLTFFYRYMRELIERGYIYIAQPPLYKIEQGKQVRYAYNDRQ 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P+ IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F L
Sbjct: 557 LEKILAELPAQPKPMIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEIL 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENARYVKNLD 639
>gi|196249898|ref|ZP_03148594.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
gi|196210774|gb|EDY05537.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
Length = 640
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 339/623 (54%), Positives = 441/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY + I V + DNS+++ADNGRGIP+D+H A
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTEIHVTIGEDNSITIADNGRGIPVDVHEA 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V+RDG ++Q
Sbjct: 91 TGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSEWLEVYVYRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG+P T L +D DR GT RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 149 KYERGEPRTDLQV----IDETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L E D N+ NEYF+ GG+ YV+ LN ++ LH+ + G R DGI +
Sbjct: 205 GLKITLTDERVD---NRKNEYFYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y+ + + N+I T +GGTH G K +LTR +N +K + KD D +L+
Sbjct: 259 EIALQY-NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKDNDANLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P P+FEGQTKT+LGN + R V D E +L HP V I
Sbjct: 318 GEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLEHPAVARKI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 378 VEKGMMAARARVAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ GEDF RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEDFDISKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 497 KVIIMTDADVDGAHIRTLLLTFFYRYMRELIERGYIYIAQPPLYKIEQGKQVRYAYNDRQ 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P+ IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F L
Sbjct: 557 LEKILAELPAQPKPMIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEIL 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENARYVKNLD 639
>gi|357014909|ref|ZP_09079908.1| DNA gyrase subunit B [Paenibacillus elgii B69]
Length = 636
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 322/619 (52%), Positives = 433/619 (69%), Gaps = 13/619 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY + I V + DNSV+V DNGRGIP+ +P
Sbjct: 29 MYIGSTSSRGLHHLVWEVVDNSIDEALAGYCTRIHVIVHRDNSVTVIDNGRGIPVGENPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS+ L V V R+G + Q
Sbjct: 89 LKKSTVEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSKKLIVEVKREGKVHQQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P L + D GT++ FWPD+Q+FT ++ + T+ RIRELAFLN
Sbjct: 147 EYRCGVPQQELQV----IGESDETGTKVTFWPDEQIFTETTEYSYETLQSRIRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I L E +D ++ +F+ GG+ +V++LN +++ LH + D I +++AL
Sbjct: 203 GIEITLTDERTDVSQS----FFYEGGIISFVEFLNQNREALHQAIYVEGQKDNIQVEIAL 258
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D+Y++ + +AN+I T +GGTH G K++LTR LN +K +KD D +L+G+ V
Sbjct: 259 QY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRILNDFARKFNAIKDSDANLTGDDV 317
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+T IISV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P + I+ K
Sbjct: 318 REGITAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFMDENPTIARKIIEKG 377
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQG
Sbjct: 378 VQAQRAREAARKARELTRRKSALEVSSLPGKLADCSSKDASISEVYIVEGDSAGGSAKQG 437
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + + EI+ +I ALG G+ GEDF RYHKIII
Sbjct: 438 RDRHFQAILPLRGKILNVEKARMDKILSDNEIRAIITALGTGI-GEDFDIAKARYHKIII 496
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ER K V+Y Y+D + + +
Sbjct: 497 MTDADVDGAHIRTLLLTFFYRYMRKLIEVGYVYIAQPPLYKLERNKTVRYAYNDKQREAI 556
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ F +IQR+KGLGEM P QLWETT++PE R + Q+ I+DA EA+ +F +LMG+
Sbjct: 557 LAEFGDGVKVNIQRYKGLGEMNPEQLWETTMDPESRTMLQVSIQDAIEADTMFDTLMGSN 616
Query: 601 VDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 617 VEPRRDFIQLHAKYVQNLD 635
>gi|73670270|ref|YP_306285.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
gi|72397432|gb|AAZ71705.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
Length = 633
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 332/619 (53%), Positives = 435/619 (70%), Gaps = 14/619 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + I V + D SV+V DNGRGIP+D HP
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTIINVTINPDGSVTVLDNGRGIPVDPHPF 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+SVVN LSE LEV V R+G +Y Q
Sbjct: 87 HKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNGLSEWLEVEVAREGKKYFQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP VL + + + GT+ F PD+++F T + FD+ ++ R+RELAFLN
Sbjct: 145 RYDRGKP----KADVLEIGTSETTGTKTTFKPDEKIFET-LDFDYEILSNRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
LTI+L D Q + + GG+ E+V++LN K+PLH + F + D + +++A+
Sbjct: 200 GLTISLM--DLRTPDGQAETFTYEGGIVEFVKYLNNKKQPLHAPIYFERQRDDMVVEIAM 257
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ S +Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ DI L+G+ V
Sbjct: 258 QYTS-SYAENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DIKLTGDDV 315
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT IISV++ P+FEGQTKTRLGN +V+ +VD V + L EY E +P V + IL K+
Sbjct: 316 REGLTAIISVKLMEPQFEGQTKTRLGNSDVKGIVDSLVTDGLAEYFEENPKVANVILEKA 375
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A KA AAK+AR+L R+K+ L S+LPGKLADCS P EI+IVEG+SAGGSAKQG
Sbjct: 376 LLAQKAREAAKKARELTRRKNALEVSTLPGKLADCSEKNPAACEIYIVEGNSAGGSAKQG 435
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ A + KNEEI +LI A+G G+ EDF E+ RYHK+II
Sbjct: 436 RDRSFQAILPLRGKILNVEKSRLAKILKNEEIISLITAIGTGI-SEDFTLESARYHKVII 494
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDG HIRTLLLT F+RY + L DEG +Y+ PPLY++++GK Y + D EL+
Sbjct: 495 MTDADVDGEHIRTLLLTLFFRYMRPLIDEGYVYIAQPPLYRIKKGKAEYYIHSDRELEAK 554
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
K L IQR+KGLGEM P QLWETT+NPE R+L Q+ +EDA A+ +F LMG
Sbjct: 555 KKELGEKGL-GIQRYKGLGEMNPGQLWETTMNPESRILLQVTLEDAIRADEIFRVLMGDE 613
Query: 601 VDTRKELIQ-NAANLVNLD 618
V+ R+ I+ +A +VNLD
Sbjct: 614 VEPRRNFIEAHAKEVVNLD 632
>gi|27262246|gb|AAN87404.1| DNA gyrase subunit B [Heliobacillus mobilis]
Length = 641
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/620 (52%), Positives = 443/620 (71%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IEV + DNS+ V+DNGRGIP+D+HP
Sbjct: 35 MYIGSTSARGLHHLVYEIVDNSIDEALAGYCDTIEVIIHEDNSIEVSDNGRGIPVDIHPK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKFGG GY VSGGLHGVGLSVVNALSE L+VTV R+G + Q
Sbjct: 95 MGKPAVEVALTVLHAGGKFGGE--GYKVSGGLHGVGLSVVNALSEKLKVTVRRNGKVHEQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG +T L V + + GT I F PD +F +++ + T++ R+REL+FLN
Sbjct: 153 YYERGVTMTDLKV----VGNAESTGTTIYFKPDGLIFE-ELEYSYETLSHRLRELSFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L+ D Q + + GG+ ++V++LN +K +H V+ F+ + +G+ +++A
Sbjct: 208 GVKITLK----DLRTGQESIFAHEGGIIDFVKFLNRNKDLIHPHVIYFQNEKEGVHVEMA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D YS+T+ YAN+I T +GGTH G K +LTR +N G++ +K+ D +LSGE
Sbjct: 264 LQY-NDGYSETLFSYANNINTQEGGTHESGFKTALTRVINDYGRRINQIKENDSNLSGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T +ISV+V P+FEGQTKT+LGN EVR + D V E L+ YLE +P V ++ K
Sbjct: 323 IREGITAVISVKVREPQFEGQTKTKLGNSEVRGITDSCVTEGLSTYLEENPSVGKKVIEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+LSA++A AA++AR+L R+KS L S+SLPGKLADCS P E++IVEGDSAGGSAKQ
Sbjct: 383 ALSAMRAREAARKARELTRRKSALESTSLPGKLADCSFKDPSMCELYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ LI ALG G+ GEDF RYH++
Sbjct: 443 GRDRRFQAILPLRGKILNVEKSRLDKILSNEEIRALITALGTGI-GEDFDLSKARYHRVC 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ K L + G +Y+ PPLY+V++G+ V+Y Y D EL +
Sbjct: 502 LMTDADVDGSHIRTLLLTFFFRHMKPLIENGYVYIAQPPLYQVKKGRDVRYYYHDNELNQ 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLW+TT++PE R + Q+ +EDAAEA +F++LMG
Sbjct: 562 YLDKNGRDGV-TIQRYKGLGEMNPEQLWDTTMDPEHRTILQVSMEDAAEAESIFTTLMGD 620
Query: 600 RVDTRKELIQ-NAANLVNLD 618
RV+ R+E IQ +A ++ NLD
Sbjct: 621 RVEPRREFIQSHAKDVRNLD 640
>gi|157690804|ref|YP_001485266.1| DNA gyrase subunit B [Bacillus pumilus SAFR-032]
gi|157679562|gb|ABV60706.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bacillus pumilus
SAFR-032]
Length = 642
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/620 (52%), Positives = 437/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I V + DNS++V DNGRGIP+ +H
Sbjct: 32 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTDITVQIEKDNSITVKDNGRGIPVGIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q
Sbjct: 92 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV L + D GT F PD ++FT I+FD++T+A R+RELAFL
Sbjct: 150 QFKRGVPVGDLEI----IGETDVTGTTTHFVPDPEIFTETIEFDYDTLANRVRELAFLTK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++A
Sbjct: 206 GVNIII--EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGERDGITVEVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE
Sbjct: 264 LQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 323 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 383 GVMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 443 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 502 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYVYNDKQLDE 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S +QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG
Sbjct: 562 LLKSLSQTPKPGLQRYKGLGEMNAAQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGD 621
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 622 KVEPRRNFIEENAQYVKNLD 641
>gi|379718020|ref|YP_005310151.1| protein GyrB [Paenibacillus mucilaginosus 3016]
gi|378566692|gb|AFC27002.1| GyrB [Paenibacillus mucilaginosus 3016]
Length = 637
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 327/620 (52%), Positives = 435/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY + IEV + DNS++V DNGRGIP+ HP
Sbjct: 29 MYIGSTSARGLHHLVWEVVDNSIDEALAGYCTRIEVIVHKDNSITVIDNGRGIPVGEHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE VLT HAGGKFGG SGY VSGGLHGVG+SVVNALS+ L V V R+G + Q
Sbjct: 89 LKKSTLEVVLT--HAGGKFGGDESGYKVSGGLHGVGISVVNALSKKLVVQVKREGKVHQQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S G P L + + GT+ FWPD+++F ++D +T+ RIRELAFLN
Sbjct: 147 EFSCGVPQYDLKI----IGETEETGTQATFWPDEEIFKETTEYDFDTLQSRIRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
+ I L E SD N + + GG+ +V+ LN +++PLH+ F + D IT+++A
Sbjct: 203 GIEIVLTDERSDVS----NSFMYEGGIVSFVEHLNRNREPLHEPPIFVEGEKDNITVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T +GGTH G K++LTR LN +K T+KD D +LSG+
Sbjct: 259 LQY-NDTYAENIYSFANNINTHEGGTHESGFKSALTRILNEYARKYNTIKDNDANLSGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ + L E+L +P V I+ K
Sbjct: 318 VREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFSDKLEEFLVENPSVAKKIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 378 GVQAQRAREAARKARELTRRKSALEVSSLPGKLADCSSKDASISEVYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ G+DF+ RYHK+I
Sbjct: 438 GRDRHFQAILPLRGKILNVEKARLDKILSNAEIRAIITALGTGI-GDDFEITKARYHKVI 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L + G +Y+ PPLYK+ER K ++Y Y+D + +
Sbjct: 497 IMTDADVDGAHIRTLLLTFFFRYMRKLIEAGFVYIAQPPLYKLERNKTIRYAYNDKQREA 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F A ++QR+KGLGEM P QLWETT++P+ R L Q+ I+DA +A+VVF +LMG
Sbjct: 557 IMAEFGEGAKVNVQRYKGLGEMNPGQLWETTMDPDSRTLLQVSIQDAIDADVVFDTLMGD 616
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 617 AVEPRRDFIQLHARYVKNLD 636
>gi|407472538|ref|YP_006786938.1| DNA gyrase subunit B [Clostridium acidurici 9a]
gi|407049046|gb|AFS77091.1| DNA gyrase subunit B [Clostridium acidurici 9a]
Length = 636
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 440/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DN++DEA AG I++++ D SV+V+DNG GIP+ +HP
Sbjct: 30 MYIGSTGPKGLHHLVYEVVDNSIDEALAGRCDTIKISINEDGSVTVSDNGIGIPVAIHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKF G + Y VSGGLHGVG+SVVNALSE LEV + R+G + Q
Sbjct: 90 TGKSTVETVLTVLHAGGKFDGGA--YKVSGGLHGVGVSVVNALSEWLEVVIKREGKIHKQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G P T L + D GT I F PD +F ++F + T+ R+RELAFLN
Sbjct: 148 RFEIGIPQTELEV----IGDSDETGTTITFMPDATIFD-EVEFKYETLEYRLRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D N+ E+F+ GG++ +V+++N +K +H DV+ F + + ++LA
Sbjct: 203 GVKIIF----EDKRTNKEQEFFYEGGIKAFVEYMNRNKDSIHSDVIYFEGEREDSVVELA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D YS+ +L +AN+I T +GG+H+ G++++LTR +N + + +K+KD +L+G+
Sbjct: 259 LQYTTD-YSENILAFANNINTHEGGSHLSGLRSALTRVINDYARTNSLLKEKDENLTGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T ++SV++ P+FEGQTKT+LGN E+R +V+ V + L +LE +P I+ K
Sbjct: 318 VREGITAVLSVKLSEPQFEGQTKTKLGNSEMRGIVEGVVYDSLNRFLEENPKEAKIIIDK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A + AA++AR+L R+K+VL SS+LPGKLADCS PE+ EI+IVEG+SAGGSAKQ
Sbjct: 378 GIKAARVREAARKARELTRRKNVLESSALPGKLADCSERDPEKCEIYIVEGNSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+N+E+ + ++EI+N+I A G G+ GEDF +RY KI+
Sbjct: 438 GRDRSTQAILPLRGKIMNIEKARLDKILSSDEIKNMITAFGCGI-GEDFDPNKIRYGKIV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L + G I++ PPLYKV++GK +Y YDD EL+
Sbjct: 497 IMTDADVDGAHIRTLLLTFFYRYMKPLIENGNIFIAQPPLYKVKKGKVEKYAYDDRELEV 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V YS+QR+KGLGEM P QLW+TT+NPE R + Q+ IEDAA A+ +F++LMG
Sbjct: 557 VLDEIGRTG-YSLQRYKGLGEMNPEQLWDTTMNPETRTMLQVNIEDAAAADDIFTTLMGD 615
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V R+E I +NA N+ NLD
Sbjct: 616 KVKPRREFIEENALNVKNLD 635
>gi|20090442|ref|NP_616517.1| DNA topoisomerase subunit B [Methanosarcina acetivorans C2A]
gi|19915457|gb|AAM04997.1| DNA topoisomerase (ATP-hydrolyzing), subunit B [Methanosarcina
acetivorans C2A]
Length = 634
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 331/620 (53%), Positives = 435/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + ++V + D SV+V DNGRGIPID HP
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGFCTRVDVTINPDGSVTVLDNGRGIPIDPHPV 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE L V V RDG +Y Q
Sbjct: 87 HKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWLNVEVERDGKKYFQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP V + + GT+ F PD ++F T F ++ ++ R+RELAFLN
Sbjct: 145 RYIRGKP----EAEVQETGTSEITGTKTTFKPDARIFETT-DFQYDILSNRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
LTI L K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A
Sbjct: 200 GLTINL-KDLRSPE-GQAETFIYSGGIVEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +++Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+
Sbjct: 258 MQY-TNSYTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DAKLTGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ P+FEGQTKTRLGN EV+ +VD V + L EY E +P V + IL K
Sbjct: 316 VREGLTAIISVKLMEPQFEGQTKTRLGNSEVKGIVDSLVTDGLAEYFEENPKVANVILEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A KA AAK+AR+L R+KS L S+LPGKLADCS P EI+IVEG+SAGGSAKQ
Sbjct: 376 ALLAQKAREAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVCEIYIVEGNSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ A + KN E+ +LI ALG GV EDF E+ RYHK+I
Sbjct: 436 GRDRGFQAILPLRGKILNVEKSRLAKILKNNEVVSLITALGTGV-SEDFALESARYHKVI 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLT F+RY + L D G +Y+ PPLY++++GK Y + D EL+
Sbjct: 495 LMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYVYIAQPPLYRIKKGKSEYYIHSDRELEV 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
K L +IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA A+ +F LMG
Sbjct: 555 KKKELGEKGL-AIQRYKGLGEMNPEQLWETTMNPESRTLLQVTLEDALRADEIFRVLMGD 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ I+ +A +V+LD
Sbjct: 614 EVEPRRNFIETHAKEVVDLD 633
>gi|312126267|ref|YP_003991141.1| DNA gyrase subunit B [Caldicellulosiruptor hydrothermalis 108]
gi|311776286|gb|ADQ05772.1| DNA gyrase, B subunit [Caldicellulosiruptor hydrothermalis 108]
Length = 637
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 326/624 (52%), Positives = 439/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV + DNSV+V D+GRGIP+D+HP
Sbjct: 31 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVVIHKDNSVTVIDDGRGIPVDIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 91 LQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP TC + + + DR GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 149 RYERGKP----TCELKVIGTTDRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 203
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R+++ P + +YN GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 204 GIRIVFVDEREKNVKPIELKYN-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L
Sbjct: 259 EVAVQYTED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLL 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I
Sbjct: 317 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKI 376
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 377 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 437 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D
Sbjct: 496 HKIIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDK 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K+ +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+
Sbjct: 556 ELQKILQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTI 612
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E I+ NA + NLD
Sbjct: 613 LMGDKVEPRREFIEKNAKYVRNLD 636
>gi|217076995|ref|YP_002334711.1| DNA gyrase B subunit [Thermosipho africanus TCF52B]
gi|419759567|ref|ZP_14285861.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
gi|217036848|gb|ACJ75370.1| DNA gyrase, B subunit [Thermosipho africanus TCF52B]
gi|407515387|gb|EKF50145.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
Length = 627
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 326/609 (53%), Positives = 429/609 (70%), Gaps = 17/609 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN++DE+ GY I+V + D SV V DNGRGIP+D+HP
Sbjct: 23 MYIGSTGKAGLHHLVYEIVDNSIDESLQGYCDTIKVTIFKDGSVEVEDNGRGIPVDIHPE 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALE V+T LHAGGKF S Y VSGGLHGVG SVVNALS+ LEV V RDG Y+Q
Sbjct: 83 TGKSALEVVMTTLHAGGKF--SKDSYKVSGGLHGVGASVVNALSQWLEVEVHRDGKVYYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P TC V + +++GT +RF PD +F+T FD +TI R+RELAFLNP
Sbjct: 141 RYERGTP----TCEVKIIGETEKRGTTVRFKPDPLIFSTT-DFDTDTILMRLRELAFLNP 195
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI + E ++ E+ + + GG++E+V L+ K LH+ V + + I ++++
Sbjct: 196 NITIYFKDERNNTERT----FHYTGGIKEFVSHLSKGSKSLHEPVYISGEYEKIKVEVSF 251
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D+ + + + N+IRT+DGGTH+ G K++ TR +N LG+K+ +K KD SL G+ V
Sbjct: 252 QY-TDSDFEKIYSFVNNIRTVDGGTHVTGFKSAFTRVVNELGRKTGQLK-KD-SLRGDDV 308
Query: 301 REGLTCIISVRVPN-PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+ +ISV + + PEFEGQTK++LGN EV++ V + V+E L E+ E + + L I+ K
Sbjct: 309 REGMVAVISVLMSSTPEFEGQTKSKLGNEEVQEAVAKVVREKLLEFFETNENTLKIIIQK 368
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A KA AAK AR++V++KSV SSSLPGKLADC + EESE+FIVEGDSAGGSAKQ
Sbjct: 369 ALEAKKAREAAKHAREMVKRKSVFGSSSLPGKLADCITKKLEESELFIVEGDSAGGSAKQ 428
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQAILPLRGKILNVE+ + KNE+++++I ALG+G+ G+DF + LRY KII
Sbjct: 429 ARDRNFQAILPLRGKILNVEKSSWLKLLKNEQVRDIITALGVGI-GDDFDIKKLRYGKII 487
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY K L +EG IY+ PPLYK+ GK Y Y D EL+
Sbjct: 488 IMTDADVDGAHIRTLLLTLFYRYMKELIEEGRIYIAQPPLYKLTVGKDHYYFYSDEELED 547
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
K + Y IQR+KGLGEM P QLWETT++P R L ++ IEDA A+ +F LMG+
Sbjct: 548 FKKTLEDKK-YEIQRYKGLGEMNPEQLWETTMDPNTRKLLKVSIEDAETADELFEMLMGS 606
Query: 600 RVDTRKELI 608
++RKE I
Sbjct: 607 DTESRKEFI 615
>gi|217967929|ref|YP_002353435.1| DNA gyrase subunit B [Dictyoglomus turgidum DSM 6724]
gi|217337028|gb|ACK42821.1| DNA gyrase, B subunit [Dictyoglomus turgidum DSM 6724]
Length = 635
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 333/622 (53%), Positives = 448/622 (72%), Gaps = 20/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHL++E++DN++DE AGY + I V L D SV VADNGRGIP+D+HP
Sbjct: 29 MYIGDTGIRGLHHLIFELVDNSIDEVMAGYCNYILVELKKDGSVVVADNGRGIPVDIHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K ALE VLT LHAGGKF S+S Y +SGGLHGVGLSVVNALS LEV V RDG ++Q
Sbjct: 89 AKKPALEVVLTTLHAGGKF--SNSIYKISGGLHGVGLSVVNALSSKLEVEVMRDGKIFYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +GKPV LT D GT+IRF+PD ++F T +FD++ +A R+RELAFLNP
Sbjct: 147 GYEKGKPVMPLTVR----GETDETGTKIRFYPDSEIFETT-KFDYDIVANRLRELAFLNP 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI LR E + + N + + GGL E++++L+ K+ LH+ + R++ + + +++ +
Sbjct: 202 NVTIELRDERT----GKSNVFKYEGGLLEFIEYLSKGKEILHEPIYMRREEENLIVEIVM 257
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ S Y + +L YAN+I TI+GGTH+ G + +LTR +N+ + K+ + SLSG+ V
Sbjct: 258 QYNS-GYDELILSYANNIHTIEGGTHVTGFRTALTRVVNNFARNWGLWKENE-SLSGDDV 315
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E LTEY +P+V I+SK
Sbjct: 316 REGLTAIVSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEEELTEYFSENPEVGKLIISKI 375
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ A +A AA++AR+LVR+KS+L SS LPGKLADCS PE+ E+FIVEG+SAGGSAKQ
Sbjct: 376 IEAYRARQAARKARELVRRKSLLESSLLPGKLADCSERDPEKCELFIVEGESAGGSAKQA 435
Query: 421 RDRRFQAILPLRGKILNVERKDE-AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDRR+QAILPLRGKILNVE+ + +EEI+ +I +LG G+ G+DF LRYHKII
Sbjct: 436 RDRRYQAILPLRGKILNVEKAQHLTKILSSEEIKAIIASLGTGI-GQDFDLSKLRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G IY+ PPLY +++GK+ +Y Y + E ++
Sbjct: 495 IMTDADVDGAHIRTLLLTFFYRHFRPLIEGGYIYIAQPPLYLLKKGKEERYAYSEEEKEE 554
Query: 540 V--KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + +P N IQR+KGLGEM P QL ETT++P++R+L Q+ IEDA EA +FS LM
Sbjct: 555 ILREWGYPDNVY--IQRYKGLGEMDPEQLRETTMDPQKRILLQVTIEDALEAERLFSILM 612
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G V+ R+ I+ A V NLD
Sbjct: 613 GNNVEERRSFIEQKAKFVRNLD 634
>gi|402570644|ref|YP_006619987.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
gi|402251841|gb|AFQ42116.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
Length = 644
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 440/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYEI+DN++DEA AG+ + I+V + DNS++V DNGRGIP+D+HP
Sbjct: 36 MYIGTTGPRGLHHLVYEIVDNSIDEALAGFCNEIDVIIHQDNSITVVDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K +E LTVLHAGGKFGGS S Y VSGGLHGVGLSVVNALS+ L V V + G YHQ
Sbjct: 96 TGKPGVELALTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSKWLVVEVSKGGHVYHQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS GKP T L + V ++ GT+I F PD ++F + +D N +A R+REL+FLN
Sbjct: 156 EYSIGKPTTKL----INVGETNKSGTKISFMPDSEIFEETV-YDFNILAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+TI L E +D ++ + GG++++V++LN +K LH F + + D + +++
Sbjct: 211 SVTINLTDERTDVKET----FLHTGGIQDFVRYLNKNKDCLHPQPIFIETLKDSVQVEVC 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +L+G+
Sbjct: 267 MQY-NDGYAENLFSYANNINTQEGGTHEAGFKSALTRVVNDYARKNNMIKAGDSNLTGDD 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD + E L+ +LE +P + + K
Sbjct: 326 IREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLSTFLEENPSIARKFIDK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQ
Sbjct: 386 SVQAARARDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE+ + N EI+ +I A+G G+ +DF E RYHK+I
Sbjct: 446 GRDRRFQAILPLRGKIINVEKARLDKILGNTEIRAMITAMGTGIS-DDFDIEKARYHKLI 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L + +Y+ PPLYKV++GK +QY Y + EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRYMKPLIENNFVYIAQPPLYKVKKGKDIQYVYTEPELTK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V + + IQR+KGLGEM P QLWETT++P +R + ++ +EDA +FS LMG
Sbjct: 565 VLEKIGRDKV-EIQRYKGLGEMNPEQLWETTMDPAKRTILRVTMEDAMRTEEMFSVLMGD 623
Query: 600 RVDTRKELIQN-AANLVNLD 618
+V+ R++ I A ++ NLD
Sbjct: 624 KVEPRRDFINRYAKDVRNLD 643
>gi|373457143|ref|ZP_09548910.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
gi|371718807|gb|EHO40578.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
Length = 636
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 329/622 (52%), Positives = 437/622 (70%), Gaps = 16/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGYA+ I V + D S+SV DNGRGIP+DLHP
Sbjct: 26 MYIGDVTSKGLHHLVYEIVDNSIDEAMAGYATEIMVTIHPDESISVEDNGRGIPVDLHPV 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++T LHAGGKF ++ Y VSGGLHGVG SVVNALSE +V ++R+ Y Q
Sbjct: 86 EKKPAVEIIMTTLHAGGKFDKNT--YKVSGGLHGVGASVVNALSEWCKVEIYRNNKIYQQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D++GT+I F D ++F I + +A R+RELAFLN
Sbjct: 144 VYERGAPVTELKI----IGETDKRGTKITFLADSEIFK-KISYKFEVLANRLRELAFLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I + E +D ++ Y + GGL+E+V +L+ + PLH+ + F + DGI +++A
Sbjct: 199 NLKITIVDERNDIQET----YQYEGGLKEFVAYLDASRTPLHEEPIYFEGERDGIPVEIA 254
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
LQ+ + AY++ +L Y N++ T++GGTH+ G K++LTRT+NS +K +K+ D I+LSGE
Sbjct: 255 LQYNT-AYTENILTYCNNVNTMEGGTHLSGFKSALTRTINSYAQKYNFIKNNDKINLSGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+VP P+FEGQTKT+LGN EVR V+ V E L E+LE +P V I+
Sbjct: 314 DVREGLTAVISVKVPEPQFEGQTKTKLGNSEVRGAVETLVNEKLFEFLEQNPAVARPIIE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K +SA +A AA++AR+L R+K+VL SSSLPGKLADCSS P+ESE+++VEGDSAGGSAK
Sbjct: 374 KCISAARAREAARQARELTRRKTVLDSSSLPGKLADCSSNDPKESELYLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDRRFQAILPL+GKILNVE+ + N+EI+ +I A+G G+ + F E RY KI
Sbjct: 434 QARDRRFQAILPLKGKILNVEKARLDKILSNDEIKTIITAIGTGIGSDSFDIEKRRYDKI 493
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY L +G IY+ PPLYK++ GKQ Y +DD E +
Sbjct: 494 IIMTDADVDGAHIRTLLLTFFYRYMGELIQQGKIYIAQPPLYKIKNGKQEFYAFDDEEKE 553
Query: 539 K-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ +K + IQR+KGLGEM P QLWETT+NPE R + Q+ I++A EA+ +F+ LM
Sbjct: 554 RIIKELGVDESKVVIQRYKGLGEMNPEQLWETTMNPETRTILQVSIDNAMEADQIFTILM 613
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G V RK+ I+ A V NLD
Sbjct: 614 GEEVAPRKKFIEENAQFVRNLD 635
>gi|222528063|ref|YP_002571945.1| DNA gyrase subunit B [Caldicellulosiruptor bescii DSM 6725]
gi|222454910|gb|ACM59172.1| DNA gyrase, B subunit [Caldicellulosiruptor bescii DSM 6725]
Length = 650
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 324/624 (51%), Positives = 439/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV + DNSV+V D+GRGIP+D+HP
Sbjct: 44 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVVIHKDNSVTVIDDGRGIPVDIHPK 103
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 104 LQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQ 161
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP TC + + + DR GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 162 RYERGKP----TCELKVIGTTDRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 216
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 217 GIRIVFVDEREKNVKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 271
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L
Sbjct: 272 EVAVQYTED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLL 329
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I
Sbjct: 330 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSERLAAFLEENPDVSKKI 389
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 390 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 449
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 450 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D
Sbjct: 509 HKVIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDK 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K+ +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+
Sbjct: 569 ELQKILQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTI 625
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E I+ NA + NLD
Sbjct: 626 LMGDKVEPRREFIEKNAKYVRNLD 649
>gi|392423465|ref|YP_006464459.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
gi|391353428|gb|AFM39127.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
Length = 644
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 439/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG I+V + DNS++V DNGRGIP+D+HP
Sbjct: 36 MYIGSTSSRGLHHLVYEIVDNSIDEALAGVCDQIDVYIHNDNSITVIDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E LTVLHAGGKFGGS S Y VSGGLHGVGLSVVNALS L V V + G YHQ
Sbjct: 96 MGKPTVEVCLTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSNWLIVEVSKGGHIYHQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y++GKP T L L + + + GT+I F PD ++F + +D++ +A R+REL+FLN
Sbjct: 156 EYAKGKPTTDL----LDIGTTEGTGTKITFMPDPEIFEDTV-YDYDILAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L+ E SD ++ +F GG++++V +LN K LH + + DG+ +++
Sbjct: 211 SVKINLKDERSDIQET----FFHTGGIQDFVLYLNKTKDCLHPQPIFIETNKDGVQVEVC 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +LSG+
Sbjct: 267 MQY-NDSYTENLYSYANNINTQEGGTHEAGFKSALTRVINDYARKNNILKSSDSNLSGDD 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV+VP+P+FEGQTKT+LGN E+R +VD S E L+ +LE +P V + K
Sbjct: 326 IREGLTAVVSVKVPDPQFEGQTKTKLGNSEIRGIVDSSTGEGLSTFLEENPTVTRKFIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQ
Sbjct: 386 SLQAARARDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + N EI+ +I A+G G+ +DF RY+K+I
Sbjct: 446 GRDRRFQAILPLRGKILNVEKARLDKILANAEIRAMITAMGTGIS-DDFDISKARYNKLI 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L + +Y+ PPL+KV++G+ +QY Y DAEL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRYMKPLLENNYVYIAQPPLFKVKKGRDIQYAYSDAELNK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + IQR+KGLGEM P QLWETT++P +R + Q+ IEDA + +FS LMG
Sbjct: 565 ILDTIGREKV-EIQRYKGLGEMNPEQLWETTMDPAKRTILQVTIEDALRSEDMFSVLMGD 623
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ +A ++ NLD
Sbjct: 624 KVEPRREFIQRHAKDVRNLD 643
>gi|312621133|ref|YP_004022746.1| DNA gyrase subunit B [Caldicellulosiruptor kronotskyensis 2002]
gi|312201600|gb|ADQ44927.1| DNA gyrase, B subunit [Caldicellulosiruptor kronotskyensis 2002]
Length = 650
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 324/624 (51%), Positives = 439/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV + DNSV+V D+GRGIP+D+HP
Sbjct: 44 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVVIHKDNSVTVIDDGRGIPVDIHPK 103
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 104 LQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQ 161
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP TC + + + DR GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 162 RYERGKP----TCELKVIGTTDRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 216
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 217 GIRIVFVDEREKNVKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 271
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L
Sbjct: 272 EIAIQYTED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLL 329
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PD+ I
Sbjct: 330 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSERLAAFLEENPDISKKI 389
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 390 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 449
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 450 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 508
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D
Sbjct: 509 HKVIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDK 568
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+KV +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+
Sbjct: 569 ELQKVLQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTI 625
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E I+ NA + NLD
Sbjct: 626 LMGDKVEPRREFIEKNAKYVRNLD 649
>gi|150020566|ref|YP_001305920.1| DNA gyrase subunit B [Thermosipho melanesiensis BI429]
gi|149793087|gb|ABR30535.1| DNA gyrase, B subunit [Thermosipho melanesiensis BI429]
Length = 627
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/609 (54%), Positives = 428/609 (70%), Gaps = 17/609 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN+VDEA GY I V + D SV + DNGRGIP+D+HP
Sbjct: 23 MYIGSTGKAGLHHLVYEIVDNSVDEALQGYCDKIYVTIFKDGSVEIKDNGRGIPVDIHPE 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALE V+T LHAGGKF S Y VSGGLHGVG SVVNALSE LEV V RDG Y+Q
Sbjct: 83 TGKSALEVVMTTLHAGGKF--SKDSYKVSGGLHGVGASVVNALSEWLEVEVHRDGKIYYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P+T V + D +GT +RF PD ++F+T ++FD +TI R+RELAFLNP
Sbjct: 141 KYQRGTPLT----EVRIIGETDYRGTIVRFKPDTEIFST-VEFDSDTILIRLRELAFLNP 195
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+T+ + E + EK + F GGL+E+V L+ + LH+ + + + I +D+
Sbjct: 196 NITVVFKDERENIEKT----FHFTGGLKEFVVHLSKGTRSLHEPILVSGEYNSIKVDVCF 251
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ + + + + + N+IRT+DGGTH+ G K + TR +N LGKK+ +K KD +L GE +
Sbjct: 252 QYTASDF-EKIYSFVNNIRTVDGGTHVTGFKTAFTRVVNELGKKTGQLK-KD-TLRGEDI 308
Query: 301 REGLTCIISVRVP-NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+ I+SV + PEFEGQTK++LGN EV++ V + V+E L EY E + + L I+ K
Sbjct: 309 REGIVAIVSVLMSKTPEFEGQTKSKLGNEEVQEAVAKVVREKLLEYFESNENTLKIIIQK 368
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A KA AAK AR+++++KSV SSSLPGKLADC + EESE+FIVEGDSAGGSAKQ
Sbjct: 369 ALEAKKAREAAKHAREMIKRKSVFGSSSLPGKLADCITKKMEESELFIVEGDSAGGSAKQ 428
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQAILPLRGKILNVE+ + KNE+I+++I ALG G+ G+DF LRY KII
Sbjct: 429 ARDRNFQAILPLRGKILNVEKSSWLKLLKNEQIRDIITALGTGI-GDDFDISKLRYGKII 487
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY K L DEG IY+ PPLYKV K++ Y Y D EL++
Sbjct: 488 IMTDADVDGAHIRTLLLTLFYRYMKELIDEGRIYIAQPPLYKVNVNKKIYYFYSDEELEE 547
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
K + + IQR+KGLGEM P QLWETT++PE+R L ++ IEDA EA+ +F LMG+
Sbjct: 548 FKENLKDKK-FEIQRYKGLGEMNPQQLWETTMDPEKRKLLKVEIEDAEEADELFEMLMGS 606
Query: 600 RVDTRKELI 608
++RKE I
Sbjct: 607 DTESRKEFI 615
>gi|312878944|ref|ZP_07738744.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
gi|310782235|gb|EFQ22633.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
Length = 635
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 430/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GPRGLHHLVYE++DNA+DEA AG + V + + SVSV DNGRGIP ++H A
Sbjct: 28 MYIGDQGPRGLHHLVYEVVDNAIDEAMAGVCDTVYVTIHPEGSVSVVDNGRGIPTEIHAA 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSA E VLTVLHAG KF Y VSGGLHGVG+SVVNALSE LEVT+WR+G E+ Q
Sbjct: 88 TGKSAAEVVLTVLHAGAKF--DKKAYQVSGGLHGVGVSVVNALSEWLEVTIWRNGREHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG VT L + DR+GT+++F PD+++F+T + F T+ GR+RELAFLNP
Sbjct: 146 RFERGAAVTELQTG----EDTDRRGTKVQFMPDEEIFST-LDFSSETLLGRLRELAFLNP 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+TI + DP ++ Y F GG+ + ++LN K+ L V R + D + +D+A
Sbjct: 201 GITIHFQDLRQDPILEKH--YHFEGGIASFAEYLNRGKEVLFKPPVVVRGEKDNVVVDVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y + + +AN I T++GGTH+ G + +LTR +N +K K +KDKD + +G+
Sbjct: 259 LQY-NDTYLERVFAFANLINTVEGGTHVSGFRTALTRAVNDQARKEKILKDKDPNFTGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLT ++SV++ P+FEGQTKT+LGN +V+ +VD V E L LE D+L ++ K
Sbjct: 318 LKEGLTAVVSVKLLEPQFEGQTKTKLGNGDVKGIVDSVVYEGLKALLEERADILKPVVDK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+ARDLVR+KS + LPGKLADCS+ PEE E++IVEG+SAGGSAK
Sbjct: 378 AVRARQAREAAKKARDLVRRKSAMSGLDLPGKLADCSNRNPEECEVYIVEGESAGGSAKM 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVER + NE ++ +I+ALG GV G+DF LRYHKI
Sbjct: 438 GRNRSFQAILPLRGKILNVERARLDKILSNEMVRTIIQALGCGV-GDDFDYAKLRYHKIF 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++ DADVDGAHIRTLLLT F+RY + + G +YV PPLY+V+ GK V YC+ D ELK
Sbjct: 497 LMADADVDGAHIRTLLLTLFFRYMPQIIENGHLYVAQPPLYRVQEGKTVHYCFSDKELKT 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++ S+QR+KGLGEM P QLWETT++P R++K++ ++DA A+ +F LMG
Sbjct: 557 LTDK--ASKRVSVQRYKGLGEMNPEQLWETTMDPANRIIKRVEVDDAVTADELFGILMGD 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R+E I+ A V NLD
Sbjct: 615 AVEPRREFIETHAKEVRNLD 634
>gi|374992786|ref|YP_004968285.1| DNA gyrase subunit B [Desulfosporosinus orientis DSM 765]
gi|357211152|gb|AET65770.1| DNA gyrase, B subunit [Desulfosporosinus orientis DSM 765]
Length = 644
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 438/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEI+DN++DEA AG+ + I+V + DNS++V DNGRGIP+D+HP
Sbjct: 36 MYIGSTGPRGLHHLVYEIVDNSIDEALAGFCNKIDVTIHLDNSITVLDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKFGGS S Y VSGGLHGVGLSVVNALSE L V V + G Y Q
Sbjct: 96 IGKPAVEVALTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSEWLIVEVSKGGHIYRQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y++GKP T L + + + GT+I F PD ++F + +D + +A R+REL+FLN
Sbjct: 156 EYAKGKPTTEL----MNIGTTKTNGTKITFLPDSEIFEIKV-YDFDILAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L+ E + E+ + AGG++++V +LN K LH + D + +++
Sbjct: 211 NITIILKDERTSVEET----FVHAGGIQDFVLYLNNSKDCLHSQPIYIETTKDNVQVEVC 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +LSG+
Sbjct: 267 IQY-NDSYTENLFSYANNINTQEGGTHEAGFKSALTRVINDYARKNNMLKPTDSNLSGDD 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD + E L+ +LE +P + + K
Sbjct: 326 IREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLSIFLEENPAIARKFIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQ
Sbjct: 386 SVQAARARDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + N EI+ +I A+G G+ +DF RYHK+I
Sbjct: 446 GRDRRFQAILPLRGKILNVEKARLDKILGNAEIRAMITAMGTGIS-DDFDISKARYHKLI 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L + IY+ PPL+KV++G+++QY Y D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRYMKPLIENNFIYIAQPPLFKVKKGREIQYAYSDNELTK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V S + + IQR+KGLGEM P QLWETT++P +R + ++ +EDA +FS LMG
Sbjct: 565 VLESIGRDKV-EIQRYKGLGEMNPEQLWETTMDPAKRTILRVTMEDAMRTESMFSVLMGD 623
Query: 600 RVDTRKELIQN-AANLVNLD 618
+V+ R++ I A ++ NLD
Sbjct: 624 KVEPRRDFINRYAKDVRNLD 643
>gi|116754690|ref|YP_843808.1| DNA gyrase, B subunit [Methanosaeta thermophila PT]
gi|116666141|gb|ABK15168.1| DNA gyrase subunit B [Methanosaeta thermophila PT]
Length = 628
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 437/620 (70%), Gaps = 20/620 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLVYE++DN+VDEA AGY I V + D SVSV D+GRGIP+D+HP
Sbjct: 26 MYIGSTDVHGLHHLVYEVVDNSVDEAMAGYCKEISVVIHGDGSVSVKDDGRGIPVDIHPQ 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N+ A+E V+TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V R+G Y Q
Sbjct: 86 YNRPAVEIVMTVLHAGGKFDHDT--YHVSGGLHGVGVSVVNALSEWLEVEVSREGRVYRQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+PV+ L + GT +RF PD ++F F + ++ R+RELAFLN
Sbjct: 144 RYERGRPVSDLQ----ETGVSENTGTTVRFKPDPEIFEVT-DFSFDVLSSRLRELAFLNR 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ E S K + + GG+ +VQ+LN K+ LH + + F + D +++++A
Sbjct: 199 GLKISITDERSGRSKT----FHYDGGIISFVQYLNKSKEVLHPNPIYFSRVRDDVSVEVA 254
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +Y++++ +AN+I T +GGTH+ G +A+LT+T+N ++ K +K D L+G+
Sbjct: 255 MQYNT-SYNESVFTFANNINTREGGTHLSGFRAALTKTVNDFVREKKLLKG-DAKLTGDD 312
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL ++SVR+P+P+FEGQTKTRLGN VR +V+ V E L EY EL+P V ++I+ K
Sbjct: 313 LREGLVAVVSVRLPDPQFEGQTKTRLGNSAVRGLVESLVSEGLMEYFELNPQVAEAIVEK 372
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A++A AA++A+++ R+K+ L SS LPGKLADC P +SE++IVEG+SAGGSAKQ
Sbjct: 373 ATEAMRAREAARKAKEITRRKTALTSSGLPGKLADCVERDPAKSELYIVEGESAGGSAKQ 432
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQA+LPLRGKILNVER M KNEEI+NLI ALG G+ G+DF RYHKII
Sbjct: 433 GRNRHFQAVLPLRGKILNVERARLDKMLKNEEIRNLITALGTGI-GDDFDITKARYHKII 491
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L + G +Y+ PPLY+V +GK V+Y Y D EL K
Sbjct: 492 IMTDADVDGSHIRTLLLTFFYRYMQPLIEAGYVYIAQPPLYQVRKGKSVKYAYSDEELAK 551
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +QR+KGLGEM P QLWETT+NPE+R L ++ ++DA EA+ +FS LMG
Sbjct: 552 LL----EDGKAVVQRYKGLGEMNPEQLWETTMNPEKRTLLRVTLKDAVEADEIFSVLMGE 607
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+ I+ A V NLD
Sbjct: 608 QVEPRRVFIETHAREVRNLD 627
>gi|319648524|ref|ZP_08002740.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
gi|404487367|ref|YP_006711473.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346363|gb|AAU38997.1| DNA gyrase beta subunit GyrB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389603|gb|EFV70414.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
Length = 637
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 436/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+ DNS++V DNGRGIP+ +H
Sbjct: 27 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVAIEKDNSITVKDNGRGIPVGIHEK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV+RDG ++Q
Sbjct: 87 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVYRDGKIHYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P L + + GT F PD ++FT ++D++T+A R+RELAFL
Sbjct: 145 EFERGVPKADLKV----IGDTEVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAFLTK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN ++ +H+ V DGIT+++A
Sbjct: 201 GVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIEGSKDGITVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +++ K+ D +LSGE
Sbjct: 259 LQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVINDYARRNGVFKESDPNLSGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 318 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFSEALEKFLLENPDSAKKIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 378 GVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 438 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYKV++GK+V+Y Y+D +L++
Sbjct: 497 IMTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKVQQGKRVEYAYNDQQLEE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P N +QR+KGLGEM QLWETT++PE R L Q+ ++DA +A+ F LMG
Sbjct: 557 ILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPETRTLLQVTLKDAIDADETFEMLMGD 616
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 617 KVEPRRNFIEENARYVKNLD 636
>gi|52078497|ref|YP_077288.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423680393|ref|ZP_17655232.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
gi|52001708|gb|AAU21650.1| DNA gyrase (subunit B) [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441499|gb|EID49208.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
Length = 639
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 436/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+ DNS++V DNGRGIP+ +H
Sbjct: 29 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVAIEKDNSITVKDNGRGIPVGIHEK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV+RDG ++Q
Sbjct: 89 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVYRDGKIHYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P L + + GT F PD ++FT ++D++T+A R+RELAFL
Sbjct: 147 EFERGVPKADLKV----IGDTEVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAFLTK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN ++ +H+ V DGIT+++A
Sbjct: 203 GVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIEGSKDGITVEVA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +++ K+ D +LSGE
Sbjct: 261 LQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVINDYARRNGVFKESDPNLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 320 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFSEALEKFLLENPDSAKKIVEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 380 GVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 440 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYKV++GK+V+Y Y+D +L++
Sbjct: 499 IMTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKVQQGKRVEYAYNDQQLEE 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P N +QR+KGLGEM QLWETT++PE R L Q+ ++DA +A+ F LMG
Sbjct: 559 ILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPETRTLLQVTLKDAIDADETFEMLMGD 618
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 619 KVEPRRNFIEENARYVKNLD 638
>gi|56418540|ref|YP_145858.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|448236315|ref|YP_007400373.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
gi|56378382|dbj|BAD74290.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|445205157|gb|AGE20622.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
Length = 638
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/623 (53%), Positives = 438/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY +NI+V + DNS++VADNGRGIP+D+H A
Sbjct: 29 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTNIDVTIGKDNSITVADNGRGIPVDIHEA 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q
Sbjct: 89 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+P T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 147 RYERGEPCTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +
Sbjct: 203 GLKITLTDERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAV 256
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+
Sbjct: 257 EIALQY-NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDTNLT 315
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I
Sbjct: 316 GEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKI 375
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 376 VEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGS 435
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYH
Sbjct: 436 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYH 494
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 495 KVIIMTDADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQ 554
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F L
Sbjct: 555 LEKILAELPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEIL 614
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 615 MGDKVEPRRQFIEENARYVKNLD 637
>gi|323342250|ref|ZP_08082482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|336065250|ref|YP_004560108.1| DNA gyrase subunit B [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463362|gb|EFY08556.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|334295196|dbj|BAK31067.1| DNA gyrase, B subunit [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 639
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 310/619 (50%), Positives = 429/619 (69%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN +DEA AG+A+ I V + DN +SV+DNGRGIP+ +H
Sbjct: 30 MYIGTTASRGLHHLVWEIVDNGIDEALAGFATEIIVNVDKDNVISVSDNGRGIPVGIHAK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S ET+ TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEV ++ DG+EY+
Sbjct: 90 TGVSTAETIFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVKIYLDGIEYYL 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G V + V D++GT +RF D +FT +F H+ + R+R++AFLN
Sbjct: 148 RFEEGGKVA---VPLKEVGKTDKKGTTVRFKADPTIFTETTEFSHDVLRDRLRQIAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + E +PE+ ++ E+ + GL EYVQ++N +K P+H+ +V + +GI ++++
Sbjct: 205 GIKLVFQDE-REPEETRHLEFVYEDGLREYVQYMNANKSPIHEEIVYCEGEEEGILVEVS 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D ++ + + N+I T +GGTH +G K +LTR +N+ K+ +K D G+
Sbjct: 264 MQY-NDGFTPNIYSFCNNINTHEGGTHEDGFKLALTRVINNYAKEHNLLKKDDDGFLGDD 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V E L +L HPD I+ K
Sbjct: 323 VREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVSSVFGEQLERFLMEHPDDAKIIVDK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AA++AR+L R+K L SSLPGKLADCS+ P E EI+IVEGDSAGGSAKQ
Sbjct: 383 AAIASKARVAARKARELTRRKGALEVSSLPGKLADCSNRNPSECEIYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD +FQAILPLRGK++NVE+ ++ N EI+ +I A G GV E + LRYHKII
Sbjct: 443 GRDSKFQAILPLRGKVINVEKARLHKIFDNNEIRMMITAFGTGVSDE-MDIDKLRYHKII 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ RG ++ Y Y++ EL +
Sbjct: 502 IMTDADVDGAHIRTLLLTFFYRFLRPLIENGFVYIAQPPLYKISRGNKIAYAYEEEELDE 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K F +++QR+KGLGEM P QLW+TT++PE R L Q+ I+DA EA+V+F +LMG
Sbjct: 562 LKVEFGDR--FNVQRYKGLGEMNPEQLWDTTMDPETRTLIQVTIDDAMEADVIFETLMGD 619
Query: 600 RVDTRKELIQNAANLVNLD 618
V R+E IQ A +LD
Sbjct: 620 EVAPRREFIQANAEYADLD 638
>gi|375006808|ref|YP_004980435.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359285651|gb|AEV17335.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 640
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/623 (53%), Positives = 438/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY +NI+V + DNS++VADNGRGIP+D+H A
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTNIDVTIGKDNSITVADNGRGIPVDIHEA 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q
Sbjct: 91 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+P T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 149 RYERGEPCTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +
Sbjct: 205 GLKITLTDERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+
Sbjct: 259 EIALQY-NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDTNLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I
Sbjct: 318 GEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 378 VEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 497 KVIIMTDADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQ 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F L
Sbjct: 557 LEKILAELPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEIL 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENARYVKNLD 639
>gi|304405884|ref|ZP_07387542.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
gi|304345127|gb|EFM10963.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
Length = 636
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 434/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AG+ ++I+V + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTSSKGLHHLVWEVVDNSIDEALAGFCTHIDVIVHEDNSITVVDNGRGIPVGENTK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE + VTV RDG Y Q
Sbjct: 88 LKKSTVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHVTVTVKRDGHVYQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P + + + GT ++F PD ++FT +++ + RIRELAFLN
Sbjct: 146 EYRRGAPQYDIKV----IGDSEETGTIVQFKPDPEIFTETTVYEYEILQSRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
++I+L +D Q N Y + GG+ E+V++LN +++ LH+ + + D I +++A
Sbjct: 202 GISISL----TDERTGQSNIYKYDGGIIEFVKYLNRNREALHETPIYVEGEKDHIQVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+YSD + +AN+I T +GGTH G K++LTR +N +++ ++KD D +LSG+
Sbjct: 258 LQY-NDSYSDNIYSFANNINTHEGGTHESGFKSALTRIINDYARRTNSIKDNDSNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V I+ K
Sbjct: 317 VREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESFFAEKLQEFLDENPSVSKRIVEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 377 GLQASRAREAARKARELTRRKSALEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ G+DF RYHKII
Sbjct: 437 GRDRHFQAILPLRGKILNVEKARLDRILGNAEIRAIITALGTGI-GDDFDIAKARYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + D G IY+ PPL+KVER K V+Y + E +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRKIIDAGFIYIAQPPLFKVERNKVVRYAQSEKERDQ 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F ++QR+KGLGEM QLWETT++PE R + Q+ IEDA EA+VVF +LMG
Sbjct: 556 IIAEFGEGVKVNVQRYKGLGEMNATQLWETTMDPESRTMLQVTIEDAMEADVVFDTLMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ I A V NLD
Sbjct: 616 NVEPRRDFIHQYAKYVKNLD 635
>gi|261417505|ref|YP_003251187.1| DNA gyrase subunit B [Geobacillus sp. Y412MC61]
gi|261373962|gb|ACX76705.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC61]
Length = 640
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/623 (53%), Positives = 438/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY +NI+V + DNS++VADNGRGIP+D+H A
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTNIDVTIGKDNSITVADNGRGIPVDIHEA 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q
Sbjct: 91 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+P T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 149 RYERGEPCTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +
Sbjct: 205 GLKITLTDERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+
Sbjct: 259 EIALQY-NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDANLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I
Sbjct: 318 GEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 378 VEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 497 KVIIMTDADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQ 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F L
Sbjct: 557 LEKILAELPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEIL 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENARYVKNLD 639
>gi|220932011|ref|YP_002508919.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219993321|gb|ACL69924.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 637
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/623 (50%), Positives = 441/623 (70%), Gaps = 15/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+E++DN++DE AGY IEV + DNS++V D GRGIP + HP
Sbjct: 29 MYIGSTGIRGLHHLVWEVVDNSIDEYLAGYGDKIEVTINEDNSITVEDWGRGIPAEEHPE 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A + V+T LHAGGKF +S Y VSGGLHGVG+SVVNALSE LE+T + +G EY+Q
Sbjct: 89 TGLPAAQVVMTTLHAGGKFNNNS--YKVSGGLHGVGISVVNALSEWLELTTYWNGNEYYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P T + + +R GT I F PD ++F +F + T+A R++E AFLN
Sbjct: 147 RYERGYPKTKFQ----KLGTSNRNGTIISFKPDPEIFDVT-EFKYETLAHRLQESAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+L++ L + SD K + +Y GG++ +V++LN +++ ++ D++ K+ I++A
Sbjct: 202 ELSLILIDKRSDKTKKEVFQY--DGGIKAFVEYLNKNRQVINEDIIYTEKENGDYYIEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + YAN+I T+DGG H+ G K +LT+ +N+ K++ +K D +L+G
Sbjct: 260 LQY-NEGYNERIFSYANNINTVDGGYHLTGFKTALTKAINNFAKQNNLLKQSDPTLTGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +++V++PNP+FEGQTK++LGN E+R +V+ ++ +YL+ YL+ +P+V I+ K
Sbjct: 319 VREGLTAVVNVKLPNPQFEGQTKSKLGNSEIRSIVESNIYDYLSLYLDSNPEVGKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A++A A+K+AR+L R+K+ L S SLPGKLADC+S PE+SE+F+VEGDSAGGSAKQ
Sbjct: 379 AIQAIRARQASKKARELTRRKNALNSHSLPGKLADCASRKPEKSELFLVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKI+NVER + N EI +I ALG G+ G++F + LRYHKII
Sbjct: 439 GRNRHFQAILPLKGKIMNVERARLDKILSNNEIATIISALGTGI-GQEFNIDKLRYHKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLT FYRY L EG IY+ PPLYKV K ++Y Y D EL+
Sbjct: 498 IMTDADVDGAHIATLLLTLFYRYMPELIKEGYIYIAQPPLYKVSWKKNIRYLYTDKELES 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K N YSIQR+KGLGEM P QLWETT+NPE R L ++ I+D EA+ +F+ LMG+
Sbjct: 558 LKREL-ENKSYSIQRYKGLGEMNPRQLWETTMNPETRKLLRIEIDDEIEADEIFTRLMGS 616
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
R+E I + A++V D LDI
Sbjct: 617 NASLRREFIISNADMV--DELDI 637
>gi|297528381|ref|YP_003669656.1| DNA gyrase subunit beta [Geobacillus sp. C56-T3]
gi|319765163|ref|YP_004130664.1| DNA gyrase B subunit [Geobacillus sp. Y412MC52]
gi|297251633|gb|ADI25079.1| DNA gyrase, B subunit [Geobacillus sp. C56-T3]
gi|317110029|gb|ADU92521.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC52]
Length = 638
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 332/623 (53%), Positives = 438/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY +NI+V + DNS++VADNGRGIP+D+H A
Sbjct: 29 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTNIDVTIGKDNSITVADNGRGIPVDIHEA 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q
Sbjct: 89 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+P T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 147 RYERGEPCTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +
Sbjct: 203 GLKITLTDERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAV 256
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+
Sbjct: 257 EIALQY-NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDANLT 315
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I
Sbjct: 316 GEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKI 375
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 376 VEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGS 435
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYH
Sbjct: 436 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYH 494
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 495 KVIIMTDADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQ 554
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F L
Sbjct: 555 LEKILAELPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEIL 614
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 615 MGDKVEPRRQFIEENARYVKNLD 637
>gi|312792288|ref|YP_004025211.1| DNA gyrase subunit B [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179428|gb|ADQ39598.1| DNA gyrase, B subunit [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 637
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 322/624 (51%), Positives = 439/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV + DNSV+V D+GRGIP+D+HP
Sbjct: 31 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVVIHKDNSVTVIDDGRGIPVDIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 91 LQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP TC + + +R GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 149 RYERGKP----TCELKVIGETNRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 203
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R++++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 204 GIRIVFVDEREKNAKPIELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L
Sbjct: 259 EVAVQYTED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLL 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I
Sbjct: 317 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKI 376
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 377 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 437 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++
Sbjct: 496 HKIIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEK 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+++ +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+
Sbjct: 556 ELQRILQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTI 612
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E I+ NA + NLD
Sbjct: 613 LMGDKVEPRREFIEKNAKYVRNLD 636
>gi|311070653|ref|YP_003975576.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|419820961|ref|ZP_14344565.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
gi|310871170|gb|ADP34645.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|388474872|gb|EIM11591.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
Length = 638
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 432/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY S I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCSEINIEIEKDNSITVRDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P+ + + D GT F PD ++FT +D++ ++ R+RELAFL
Sbjct: 146 AYERGVPMADVEV----IGETDTTGTITHFVPDPEIFTETTVYDYDLLSSRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED EK Q NEY + GG++ YV++LN K+ +H+ + DGIT+++A
Sbjct: 202 GVKITI--EDKREEKEQKNEYCYEGGIKSYVEYLNRSKEVVHEEPIYIEGTKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +K K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKKGIFKESDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L +L +PD ++ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDALFSEALETFLFENPDSARKVIDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPLYKV++GK+V+Y Y+D +L++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYIYIAQPPLYKVQQGKRVEYAYNDKQLEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V S+ P +QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG
Sbjct: 558 VLSTLPQTPKPGLQRYKGLGEMNATQLWETTMDPDTRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|310657321|ref|YP_003935042.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
gi|308824099|emb|CBH20137.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
Length = 641
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 438/620 (70%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DNA+DEA AG+ I V++ DN ++V DNGRGIP+++HP
Sbjct: 32 MYIGSTGSRGLHHLVYEVVDNAIDEALAGHCDKIYVSIDPDNGITVKDNGRGIPVEIHPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+ L V V +G Y Q
Sbjct: 92 TGKSTVETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKELIVEVKINGKIYRQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++ G P T L V +GT +RF PD VF Q+ ++T+ R+RELAFLN
Sbjct: 150 EFAYGVPQTELEI----VGETTERGTCVRFMPDDAVFEET-QYKYDTLEHRLRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L ED + + E+ + GGL E+V+++N +K P+HD V+ F K T+++A
Sbjct: 205 GIHITL--EDKREDLQKVKEFHYTGGLVEFVRYINKNKSPIHDDVIYFEKKQGDYTVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +DAY + + +AN+I T +GG H+ G K +LTR +N KKS +K K+ +L GE
Sbjct: 263 MQY-TDAYVENVYSFANNINTHEGGMHLTGFKTALTRVINDYAKKSNFLKSKEDNLMGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++S+++P+P++EGQTKT+LGNP+ R V+ + +T +L+ +P I+ K
Sbjct: 322 IREGLTAVVSIKLPDPQYEGQTKTKLGNPQARSAVETISGDNITIFLDENPASARIIVDK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KSVL S+SLPGKLADC+ P +SEI++VEGDSAGGSAKQ
Sbjct: 382 ALRAQRAREAAKKARELTRRKSVLESTSLPGKLADCAEKDPVKSEIYLVEGDSAGGSAKQ 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+ QAILPLRGKILNVE+ + ++EI+N+I A G G+ E F +E LRYHKI+
Sbjct: 442 GRDRKTQAILPLRGKILNVEKSRLDRILSSDEIRNMITAFGCGISNE-FDEEKLRYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFF+RY + L ++G +Y+ PPL+++++G++ +Y Y D EL +
Sbjct: 501 IMTDADVDGAHIRTLILTFFFRYMRPLIEKGYVYIAQPPLFRIKKGRREEYVYSDKELNE 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +QR+KGLGEM QLW+TT+NP R L ++ IEDA+ A+ +FS LMG
Sbjct: 561 RLEEIGRSNQVELQRYKGLGEMNAEQLWDTTMNPATRTLLRVTIEDASMADDIFSMLMGD 620
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 621 KVEPRRNFIQENAKYVKNLD 640
>gi|384173667|ref|YP_005555052.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349592891|gb|AEP89078.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 638
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 431/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D GT F PD ++FT ++D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFTETTEYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|346722695|ref|YP_001178861.2| DNA gyrase subunit B [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|345106666|gb|ABP65670.2| DNA gyrase, B subunit [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 639
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 325/622 (52%), Positives = 436/622 (70%), Gaps = 20/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NI+V + DNSV+V D+GRGIP+D+HP
Sbjct: 33 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIDVIIHRDNSVTVLDDGRGIPVDIHPK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + S Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 93 LQKSGVEVVFTVLHAGGKF--NESVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKPV C + + R GT++ F PD ++F T I+FD + + R+RELAFLN
Sbjct: 151 KYERGKPV----CDLKVIGQTQRTGTKVTFLPDDEIFET-IEFDADVLLQRLRELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYN-EYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I E EKN E + GG+ E+V++LN +K+ LH + + + + I +++
Sbjct: 206 GIRITFTDER---EKNPKTIELKYDGGIAEFVKFLNRNKEVLHPEPIYIEGEKNQILVEV 262
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D + + + +AN+I TIDGGTH+ G KA++T+ +N KK VK D L GE
Sbjct: 263 AIQY-TDQFGENIYSFANNIATIDGGTHLVGFKAAVTKAVNEYAKKYNFVKG-DNQLLGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+R+G+T ++SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+
Sbjct: 321 DIRDGMTAVVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIID 380
Query: 359 KSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L A KA A++AR+LV ++KS L SS+LPGKLADCS PE+ EIFIVEGDSAGGSA
Sbjct: 381 KALLAAKAREEARKARELVIKRKSALDSSNLPGKLADCSEKDPEKCEIFIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRR+QAILPL GK+LNVE+ +Y N+++ LI+ALG G+ G D + LRYHK
Sbjct: 441 KQGRDRRYQAILPLWGKMLNVEKASPDKIYSNDKLLPLIQALGCGI-GNDLDLKKLRYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+I++ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D EL
Sbjct: 500 VIVMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LM
Sbjct: 560 QKILQEMKDA---QVQRFKGLGEMNAEELWETTMDPARRILLRVELEDAVMAEEIFTILM 616
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E I+ NA + NLD
Sbjct: 617 GEKVEPRREFIEKNAKYVRNLD 638
>gi|256826465|ref|YP_003150424.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
gi|256582608|gb|ACU93742.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
Length = 645
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 324/626 (51%), Positives = 439/626 (70%), Gaps = 13/626 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AGY ++I+V + D S+ V DNGRGIP+D HP
Sbjct: 29 MYIGSTSERGLHHLVYEVVDNSVDEALAGYCTDIQVWICDDGSIKVQDNGRGIPVDKHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E VLT+LHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG Y
Sbjct: 89 EHIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTQMKVQVCRDGKRYEI 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+SRGK V L HV+ DSK GT +RFWPD ++FT F++NT+A R RE+AFLN
Sbjct: 147 TFSRGKTVEKL--HVVG-DSK-HTGTTVRFWPDPEIFTETTVFNYNTLAERFREMAFLNK 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
L I L E + D E +E F F G++++V++L T K+ L+ + F + ++
Sbjct: 203 GLKITLYDERELDGEGVAKHETFQFQDGIKDFVKFLTTGKEVLNTKPIYFEAEGPAGEVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+QW S ++++ +AN+I TI+GGTH++G K ++TRT+N ++ +K+KD +L+G
Sbjct: 263 VAMQWTSSFSTNSVFSFANNINTIEGGTHLDGFKQAVTRTINDYAREKGILKEKDSNLTG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGL+ +ISV++ +P+FEGQTKT+LGN E+R++V +V + L EYLE +P I+
Sbjct: 323 DDCREGLSAVISVKLHDPQFEGQTKTKLGNSEMRQLVSSAVNQGLGEYLEENPTPAKRII 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K+ ALKA AA++AR++ R+K+VL S +LPGKLADCSS + E+FIVEGDSAGGSA
Sbjct: 383 NKASQALKAREAARKAREMTRRKNVLDSFALPGKLADCSSKNAADCEMFIVEGDSAGGSA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ RDR++QAILPLRGKILNVER ++ I +LI A+G + G+DF E RYH+
Sbjct: 443 KQARDRKYQAILPLRGKILNVERAGLHRALSSDTISSLITAVGTNI-GDDFDAEKARYHR 501
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAE 536
III+TDADVDGAHI+ LLLTFFYRY L + G IY+ +PPLY ++ G K+++Y Y+D
Sbjct: 502 IIIMTDADVDGAHIQILLLTFFYRYMPELINRGYIYIAMPPLYGIKEGKKKIRYVYNDNA 561
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L + +P++ S+QR+KGLGEM P QLWETT+ PE R+L Q+ IEDAA A S L
Sbjct: 562 LAEAMKDYPTDKKPSVQRYKGLGEMDPDQLWETTMEPETRILMQVGIEDAAAAERAVSEL 621
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG +V+ RKE IQ A V LDI
Sbjct: 622 MGDQVEPRKEYIQKHAKDVRF--LDI 645
>gi|365874562|ref|ZP_09414095.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
gi|363984649|gb|EHM10856.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
Length = 636
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 318/623 (51%), Positives = 429/623 (68%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DNA+DEA AG+ I+V + D SVSV DNGRGIP ++HP
Sbjct: 28 MYIGDQGQRGLHHLVYEVVDNAIDEAMAGFCDTIQVTVHPDGSVSVEDNGRGIPTEMHPT 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A E VLTVLHAG KF Y VSGGLHGVG+SVVNALSE LEVT+WR+ E+ Q
Sbjct: 88 MGRPAAEVVLTVLHAGAKF--DKKAYQVSGGLHGVGVSVVNALSEWLEVTIWRNRKEHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D++GTR+ F PD ++F+T ++F + + GR+RELAFLNP
Sbjct: 146 SYRRGVPVTDLVIG----EDTDKRGTRVHFMPDGEIFST-LEFSSDVLLGRLRELAFLNP 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK----KPLHDVVGFRKDVDGITI 236
+TI +P + + F GG+ +V++LN K KP V G + DG+ +
Sbjct: 201 GVTIIFTDLRQNPPLER--KLHFEGGIASFVEYLNRGKEVLFKPPMVVKG---EKDGVIV 255
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y + + +AN I T++GGTH+ G + +LTR +N +K K +KDKD + S
Sbjct: 256 EVALQY-NDTYLERIFAFANLINTVEGGTHVSGFRTALTRIINDQARKEKLLKDKDPNFS 314
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ ++EGLT +ISV++ P+FEGQTKT+LGN +V+ +VD V E L LE P VL +
Sbjct: 315 GDDLKEGLTAVISVKLLEPQFEGQTKTKLGNGDVKGIVDSVVYEGLKVLLEDQPQVLRPV 374
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A +A AAK+ARDLVR+KS + LPGKLADCS+ PEE E++IVEGDSAGGS
Sbjct: 375 VEKAVKARQAREAAKKARDLVRRKSAMSGMDLPGKLADCSNRKPEECELYIVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AK GRDR FQAILPLRGKILNVE+ + N++++ +I+ALG GV G++F LRYH
Sbjct: 435 AKMGRDRSFQAILPLRGKILNVEKARLDKILSNDQVRTIIQALGCGV-GDEFDYSKLRYH 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KI ++ DADVDGAHIRTLLLT F+RY + + G +YV PPLY+V+ G+ V YCY D E
Sbjct: 494 KIFLMADADVDGAHIRTLLLTLFFRYMPQIIENGHLYVAQPPLYRVQEGRNVHYCYSDRE 553
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ S S+QR+KGLGEM P QLWETT++P R++K++ +EDA A+ +FS L
Sbjct: 554 LRELMQRL-SGKKASVQRYKGLGEMNPEQLWETTMDPANRVIKRVEVEDAVLADELFSIL 612
Query: 597 MGARVDTRKELIQ-NAANLVNLD 618
MG V R+E I+ +A + NLD
Sbjct: 613 MGDAVGPRREFIEAHAKEVRNLD 635
>gi|407962968|dbj|BAM56207.1| DNA gyrase subunit B [Bacillus subtilis BEST7003]
Length = 640
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 431/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 30 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D GT F PD ++F+ ++D++ +A R+RELAFL
Sbjct: 148 TYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 204 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 262 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 620 KVEPRRNFIEANARYVKNLD 639
>gi|91772465|ref|YP_565157.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
gi|91711480|gb|ABE51407.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
Length = 632
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AG+ NI+V++ AD SV+V D+GRGIP+D HP
Sbjct: 25 MYIGSVDTRGLHHLVYEVVDNSIDEALAGFCKNIDVSINADGSVTVVDDGRGIPVDNHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF S Y VSGGLHGVG+SVVNALSE +EV V RDG Y+Q
Sbjct: 85 YKKSALEVVLTVLHAGGKF--DKSNYKVSGGLHGVGVSVVNALSEWMEVEVKRDGKLYYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P + +T + GT+ F PD Q+F T +F + T+ R+RELAFLN
Sbjct: 143 RYERGAPTSDVTV----IGDAKGTGTKSTFMPDSQIFETT-EFSYGTLITRLRELAFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I + DS E+ + + + + GG+ +V+ LN + LH + F ++ +G +++A
Sbjct: 198 GIRITIT--DSREEELEQDVFEYEGGIISFVEHLNQSRTALHKTPIYFEREKEGTIVEIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + +AN+I T +GGTH+ G K +LTR N KK+ VK D L+GE
Sbjct: 256 MQY-TDSYGEYVYSFANNINTYEGGTHLIGFKTALTRVANDYIKKNNVVKG-DEKLTGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL IISV++ P+FEGQTKT+LGN E++ +VD V E L+EY+E +P V I K
Sbjct: 314 IREGLAAIISVKLTEPQFEGQTKTKLGNSELKGIVDSMVSEGLSEYMEENPKVAVIIFQK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KS L +LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 374 ALDARRAREAAKKARELTRRKSALEIGTLPGKLADCSEKDPSVSEVYLVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILP RGKI+NVE+ + + KN E+ +LI A+G G+ ED+ E RYHK+I
Sbjct: 434 GRNRRFQAILPFRGKIINVEKARLSKVLKNNEVLSLITAMGTGI-AEDYNIEKARYHKVI 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFF+RY L D G +Y+ PPLY++++GK Y Y D EL
Sbjct: 493 IMTDADVDGAHIRTLILTFFFRYMAPLIDAGYVYIAQPPLYRIKKGKAEHYVYSDRELAA 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
N Y +QR+KGLGEM P QLWETT+NP+ R L Q+ ++DAA A+ +FS LMG
Sbjct: 553 KLEEIGENNTY-VQRYKGLGEMNPEQLWETTMNPDTRTLLQVTMDDAAAADEMFSVLMGD 611
Query: 600 RVDTRKELIQN-AANLVNLD 618
V RK IQ A +VNLD
Sbjct: 612 EVAPRKAFIQKYAKEVVNLD 631
>gi|383786730|ref|YP_005471299.1| DNA gyrase subunit B [Fervidobacterium pennivorans DSM 9078]
gi|383109577|gb|AFG35180.1| DNA gyrase, B subunit [Fervidobacterium pennivorans DSM 9078]
Length = 641
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 324/624 (51%), Positives = 433/624 (69%), Gaps = 18/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN++DEA GY I+V + AD SV V DNGRGIP+D+HP
Sbjct: 34 MYIGSTGKTGLHHLVYEIVDNSIDEAIQGYCDKIKVTIKADGSVEVEDNGRGIPVDIHPE 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALE V+T LHAGGKF S Y VSGGLHGVG SVVNALSE +EV V RDG Y Q
Sbjct: 94 TGTSALEVVMTTLHAGGKF--SKESYKVSGGLHGVGASVVNALSEWMEVEVHRDGKIYRQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+RG+ VT + + ++GT +RF PDK +FTT ++FD +TI R+R+LAFLNP
Sbjct: 152 RYARGQKVTEVEV----IGETTKRGTIVRFKPDKTIFTT-VEFDSDTILTRLRDLAFLNP 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI E D N + ++GGL+E+V +LN +K LH+VV V + + +A
Sbjct: 207 NVTI----EFIDERNNIHRTLHYSGGLKEFVSYLNRGEKTLHEVVYIEGSVQDVQVQVAF 262
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D+ ++ ++ + N+I+T+DGGTH+ G K + TR +N LGKK +K + GE +
Sbjct: 263 QY-TDSDTEEIISFVNNIKTVDGGTHVTGFKTAFTRVVNELGKKKNMIKGE--PFRGEDL 319
Query: 301 REGLTCIISV-RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T +I+V + P+FEGQTK++LGN EV+ V + V++ LT+Y E++ VL I+ K
Sbjct: 320 REGMTAVIAVLMMGTPQFEGQTKSKLGNEEVQDAVAKVVRDKLTDYFEVNESVLKVIIQK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ +A AAKRAR+ V++KS L +S+LPGKLADC + EESE+FIVEGDSAGGSAKQ
Sbjct: 380 AQQTREAREAAKRAREAVKRKSSLGASTLPGKLADCITKNLEESELFIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQAILPLRGKILNVE+ +E + KNE+I+++I A+G G G++F + LRY KII
Sbjct: 440 ARDRNFQAILPLRGKILNVEKSNELKLLKNEQIRDIITAIGTGT-GDNFDESKLRYGKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELK 538
I+TDADVDGAHIRTLLL FYRY + L + G IYV +PPLYK+ G++ Y Y D ELK
Sbjct: 499 IMTDADVDGAHIRTLLLALFYRYMRPLLENGRIYVAMPPLYKLTVSGEKPVYLYSDEELK 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+S + Y IQR+KGLGEM P QLWETT+NP+ R + ++ IEDA EA+ +F LMG
Sbjct: 559 AKLASI-NGKRYEIQRYKGLGEMNPEQLWETTMNPKTRKIIRITIEDAEEADNLFEILMG 617
Query: 599 ARVDTRKELIQNAANLVNLDHLDI 622
+ R+ I A ++L LD+
Sbjct: 618 KDAEERRGYIMRHARQLSLVDLDV 641
>gi|430751860|ref|YP_007214768.1| DNA gyrase subunit B [Thermobacillus composti KWC4]
gi|430735825|gb|AGA59770.1| DNA gyrase, B subunit [Thermobacillus composti KWC4]
Length = 636
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/623 (52%), Positives = 432/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ IEV + D SV+V DNGRGIP+ HP
Sbjct: 28 MYIGSTSSRGLHHLVWEIVDNSIDEALAGFCDYIEVVIRQDGSVTVIDNGRGIPVGEHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ LE VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALSE L V V RDG + Q
Sbjct: 88 MKRPTLEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHLCVEVKRDGHIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+ + V D GT I F PD ++FT +F+++T+ RIRELAFLN
Sbjct: 146 EYKRGVPLYDVRI----VGDTDETGTIITFKPDPEIFTETTEFEYDTLQTRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I LR E + + Y + GG+ E+VQ+LN +++PLH+ + G R D I +
Sbjct: 202 GIKIVLRDERTGAS----DTYKYDGGIIEFVQYLNRNREPLHEQPIYIEGMR---DNIQV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +++ +KD D +L+
Sbjct: 255 EIALQY-NDSYNENIYSFANNIHTHEGGTHESGFKSALTRIINDYARRAGLLKDSDSNLT 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT IISV++P P+FEGQTKT+LGN E R +V+ E L E+L+ +P V I
Sbjct: 314 GEDVREGLTAIISVKIPEPQFEGQTKTKLGNSEARSIVESMFAEKLQEFLDENPSVSRRI 373
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A AA++AR+L R+K+ L S+LPGKLADCSS SE++IVEGDSAGGS
Sbjct: 374 VEKGVQAARAREAARKARELTRRKNALEVSALPGKLADCSSRDASISELYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYH
Sbjct: 434 AKQGRDRHFQAILPLRGKILNVEKARLDRILANSEIRAIITALGTGI-GEDFDLSKARYH 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYK+ER K V+Y +D E
Sbjct: 493 KIIIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYVYIAQPPLYKIERNKVVRYALNDKE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + F A +IQR+KGLGEM QLWETT++PE R + Q+ I+DA A+ +F +L
Sbjct: 553 RDEILAEFGEGAKVNIQRYKGLGEMDAEQLWETTMDPESRTMLQVTIQDAIAADAIFDTL 612
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R+E IQ A V NLD
Sbjct: 613 MGDDVEPRREFIQAHAKFVKNLD 635
>gi|302870737|ref|YP_003839373.1| DNA gyrase subunit B [Caldicellulosiruptor obsidiansis OB47]
gi|302573596|gb|ADL41387.1| DNA gyrase, B subunit [Caldicellulosiruptor obsidiansis OB47]
Length = 638
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/624 (51%), Positives = 439/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AGY NIEV + DNSV+V D+GRGIP+D+HP
Sbjct: 32 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGYCKNIEVIIHKDNSVTVIDDGRGIPVDIHPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 92 LQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSCYLEVEVYRDGKVYYQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKPV C + + + D+ GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 150 RYEKGKPV----CELKVIGTTDKTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 204
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 205 GIRIVFLDEREKNPKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L
Sbjct: 260 EVAVQYTDD-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLL 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I
Sbjct: 318 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLATFLEENPDVSKKI 377
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 378 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 437
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 438 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 496
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++
Sbjct: 497 HKVIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEK 556
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K+ +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+
Sbjct: 557 ELQKILQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTI 613
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E I+ NA + NLD
Sbjct: 614 LMGDKVEPRREFIEKNAKYVRNLD 637
>gi|16077074|ref|NP_387887.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221307815|ref|ZP_03589662.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221312137|ref|ZP_03593942.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221317070|ref|ZP_03598364.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. JH642]
gi|221321333|ref|ZP_03602627.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313673|ref|YP_004205960.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|402774249|ref|YP_006628193.1| DNA gyrase subunit B [Bacillus subtilis QB928]
gi|418030644|ref|ZP_12669129.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428277418|ref|YP_005559153.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|449092720|ref|YP_007425211.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452912985|ref|ZP_21961613.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
gi|121887|sp|P05652.1|GYRB_BACSU RecName: Full=DNA gyrase subunit B
gi|40018|emb|CAA26221.1| unnamed protein product [Bacillus subtilis]
gi|467396|dbj|BAA05242.1| B subunit of DNA gyrase [Bacillus subtilis]
gi|2632273|emb|CAB11782.1| DNA gyrase (subunit B) [Bacillus subtilis subsp. subtilis str. 168]
gi|291482375|dbj|BAI83450.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|320019947|gb|ADV94933.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|351471703|gb|EHA31816.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402479435|gb|AFQ55944.1| DNA gyrase (subunit B) [Bacillus subtilis QB928]
gi|407955697|dbj|BAM48937.1| DNA gyrase subunit B [Bacillus subtilis BEST7613]
gi|449026635|gb|AGE61874.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452118013|gb|EME08407.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
Length = 638
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 431/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D GT F PD ++F+ ++D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|405984209|ref|ZP_11042512.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
gi|404388041|gb|EJZ83125.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
Length = 649
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 328/630 (52%), Positives = 428/630 (67%), Gaps = 17/630 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V + DNS++V DNGRGIPID HP
Sbjct: 29 MYIGSTGPRGLHHLVYEVVDNSVDEALAGFCTKIDVTIHEDNSITVVDNGRGIPIDEHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E VLT+LHAGGKFGG GY VSGGLHGVG+S VNALS LEV V RDG Y
Sbjct: 89 EKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSCVNALSTRLEVEVKRDGGLYFI 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK V L + + GT+ FWPD +VFT + +D++T+A R RE+AFLN
Sbjct: 147 AFERGKTVEKLR----RIGDAEGTGTKTTFWPDPEVFTETLVYDYSTLAQRFREMAFLNK 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
L I L E D D +E F FAGG+ ++V ++N K+ L+ + F + D T+++
Sbjct: 203 GLHIELTDERDLDGSGKPKSETFQFAGGIVDFVNYINEGKETLNKPIYFEAESDDGTVEI 262
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QW S S+ +L +AN+I T +GGTH++G K +LTRT+N + +K+KD +LSG+
Sbjct: 263 AMQWSSSYSSNGILAFANNINTHEGGTHLDGFKNALTRTINDYARTHGILKEKDSNLSGD 322
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGL IISV++ +P+FEGQTKT+LGN E+R +V +V + L E+LE +P I+
Sbjct: 323 DTREGLAAIISVKLHDPQFEGQTKTKLGNTEIRGLVQGAVTKGLAEFLEENPAPAKRIIG 382
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS P SEIFIVEGDSAGGSAK
Sbjct: 383 KATQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSKDPALSEIFIVEGDSAGGSAK 442
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDR++QAILPLRGKILNVER ++ I +LI A+G + G+D+ +A RYH+I
Sbjct: 443 QARDRKYQAILPLRGKILNVERAGLNRALSSDTISSLITAIGTNI-GDDYNGDAARYHRI 501
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-----GKQVQYCYD 533
II+TDADVDGAHIR LLLTFFYRY L + G IY+ PPLY +++ GK ++Y ++
Sbjct: 502 IIMTDADVDGAHIRCLLLTFFYRYMPDLINRGYIYIAQPPLYGLKKKNSKSGKILKYLFN 561
Query: 534 DAELKKVKSSFPSNA-LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D + +A Y +QR+KGLGEM P QLWETT+ PE R L Q+ IEDAA A +
Sbjct: 562 DEAKDALMEELGDDAEKYDMQRYKGLGEMDPGQLWETTMEPETRTLLQVSIEDAAAAELA 621
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
S LMG +V+ RKE IQ A V LDI
Sbjct: 622 VSELMGDQVEPRKEFIQKHARDVRF--LDI 649
>gi|430756787|ref|YP_007211252.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430021307|gb|AGA21913.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 643
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 431/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 33 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PVT L + D GT F PD ++F+ ++D++ +A R+RELAFL
Sbjct: 151 TYKRGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 207 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 265 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 324 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 384 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 444 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL++
Sbjct: 503 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEE 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 563 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 622
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 623 KVEPRRNFIEVNARYVKNLD 642
>gi|15893304|ref|NP_346653.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
gi|337735215|ref|YP_004634662.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
gi|384456724|ref|YP_005669144.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|18273027|sp|P94604.2|GYRB_CLOAB RecName: Full=DNA gyrase subunit B
gi|15022823|gb|AAK77993.1|AE007513_6 DNA gyrase (topoisomerase II) B subunit [Clostridium acetobutylicum
ATCC 824]
gi|325507413|gb|ADZ19049.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|336292832|gb|AEI33966.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
Length = 637
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/623 (51%), Positives = 438/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEI+DN++DEA AGY S+I+V + DNSV+V+D+GRG+PI +H
Sbjct: 28 MYIGSTGTRGLHHLVYEIVDNSIDEALAGYCSHIKVFIHKDNSVTVSDDGRGMPIGIHHK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++T+LHAGGKFGG + Y VSGGLHGVG SVVNALSE+ EV V +G + Q
Sbjct: 88 MKKPTVEVIMTILHAGGKFGGGA--YRVSGGLHGVGASVVNALSETCEVEVKTEGHIWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGK + + D GT+I F PD ++F ++D++T++ R+RELAFLN
Sbjct: 146 TYHRGKVASPFE----KIGDSDEHGTKIYFKPDPEIFEDT-EYDYDTLSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVD-GITID 237
+ I L E D NE F + GGL+ +V +LN +K+ + + + +D +++
Sbjct: 201 GIKIELTDERHDK-----NEIFHYEGGLKSFVSYLNRNKEVVFKEPIYVEGSIDSNYSVE 255
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ +D Y++ + +AN+I TI+GGTH+ G K +LTR +N KK +K+ D +LSG
Sbjct: 256 IALQY-NDGYNENIFSFANNIHTIEGGTHLAGFKTALTRVINDYAKKFGYLKENDKNLSG 314
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT ++SV++ P+FEGQTKT+LGN EVR +VD + E ++ YLE +P + ++
Sbjct: 315 EDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIVDSIISERVSTYLEENPQIGKLVI 374
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L A +A AAK+AR++ R+KSVL S+SLPGKLADCSS EE EI+IVEGDSAGGSA
Sbjct: 375 DKALVASRAREAAKKAREITRRKSVLESTSLPGKLADCSSKDAEECEIYIVEGDSAGGSA 434
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+RRFQAILPLRGKI+NVE++ + +EEI+ + A G G+ G+DF LRYHK
Sbjct: 435 KQGRNRRFQAILPLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGI-GKDFDVSKLRYHK 493
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDGAHIRTL+LTFFYRY L EG +++ PPLYKV + ++ Y Y D EL
Sbjct: 494 IIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVTKTRKEYYAYSDKEL 553
Query: 538 KKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ V + + IQR+KGLGEM P QLWETT+NPEQR L ++ IEDA A+ +F+ L
Sbjct: 554 EDVLQDVGGKDKNTDIQRYKGLGEMNPEQLWETTMNPEQRTLIKVNIEDAMAADEIFTIL 613
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +VD R++ I +NA +VNLD
Sbjct: 614 MGDKVDPRRKFIEENATKVVNLD 636
>gi|312134087|ref|YP_004001425.1| DNA gyrase subunit B [Caldicellulosiruptor owensensis OL]
gi|311774138|gb|ADQ03625.1| DNA gyrase, B subunit [Caldicellulosiruptor owensensis OL]
Length = 637
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/624 (51%), Positives = 437/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV + NSV+V D+GRGIP+D+HP
Sbjct: 31 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVVIHKGNSVTVIDDGRGIPVDIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 91 LGKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKIYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+P TC + + + D+ GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 149 RYERGRP----TCELKVIGTTDKTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 203
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 204 GIRIVFLDEREKNPKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK K D L
Sbjct: 259 EVAMQYTDD-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNLTKG-DTQLL 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I
Sbjct: 317 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKI 376
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 377 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 437 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK+II+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++
Sbjct: 496 HKVIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEK 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K+ +QRFKGLGEM +LWETT++P +R+L ++ IEDA A +F+
Sbjct: 556 ELQKILQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVEIEDAVMAEEIFTI 612
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG RV+ R+E I+ NA + NLD
Sbjct: 613 LMGDRVEPRREFIEKNAKYVRNLD 636
>gi|386756586|ref|YP_006229802.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
gi|384929868|gb|AFI26546.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
Length = 638
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY +I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCKDINIQIEKDNSITVVDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV+ L + D GT F PD ++FT ++D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTETTEYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAAMETFMLENPDAAKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELED 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|344995338|ref|YP_004797681.1| DNA gyrase subunit B [Caldicellulosiruptor lactoaceticus 6A]
gi|343963557|gb|AEM72704.1| DNA gyrase, B subunit [Caldicellulosiruptor lactoaceticus 6A]
Length = 637
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 321/624 (51%), Positives = 438/624 (70%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNA+DEA AG+ NIEV + DNSV+V D+GRGIP+D+HP
Sbjct: 31 MYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIEVVIHKDNSVTVIDDGRGIPVDIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E V TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q
Sbjct: 91 LQKSGVEVVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP TC + + + GT++ F PD ++F T I+FD + I R+RELAFLN
Sbjct: 149 RYERGKP----TCELKVIGETNSTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNK 203
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I R++++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I
Sbjct: 204 GIRIVFVDEREKNAKPIELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILI 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L
Sbjct: 259 EVAIQYTED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLL 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +R+G+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I
Sbjct: 317 GEDIRDGMTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKI 376
Query: 357 LSKSLSALKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGG
Sbjct: 377 IDKAILAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRY
Sbjct: 437 SAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+ DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++
Sbjct: 496 HKIIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEK 555
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+++ +QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+
Sbjct: 556 ELQRILQEMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTI 612
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E I+ NA + NLD
Sbjct: 613 LMGDKVEPRREFIEKNAKYVRNLD 636
>gi|167629176|ref|YP_001679675.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
gi|167591916|gb|ABZ83664.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
Length = 641
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 439/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY + I+V + DNS+ V DNGRGIP+D+HP
Sbjct: 35 MYIGSTSARGLHHLVYEIVDNSIDEALAGYCNRIDVIIHDDNSIEVIDNGRGIPVDIHPK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKFGG GY VSGGLHGVGLSVVNALSE L VTV R+G + Q
Sbjct: 95 MGKPAVEVALTVLHAGGKFGGE--GYKVSGGLHGVGLSVVNALSEKLRVTVRRNGKIHEQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG + L V GT I F PD Q+F +++ ++T++ R+REL+FLN
Sbjct: 153 HYERGVATSELRV----VGQSKETGTTIYFKPDPQIFD-ELEYSYDTLSHRLRELSFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L +D Q + + +GG+ ++V++LN +K +H +V+ F+ + DG+ +++A
Sbjct: 208 GVRITL----TDKRSGQESVFAHSGGIVDFVKFLNRNKDVIHNEVIYFQTEKDGVHVEVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y + + YAN+I T +GGTH G K +LTR +N ++ +KD + +LSGE
Sbjct: 264 LQY-NDGYVENLFSYANNINTQEGGTHEAGFKTALTRVVNEYARRLNQLKDNENNLSGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T +ISV+V P+FEGQTKT+LGN EVR ++D V E + YLE HP + I+ K
Sbjct: 323 IREGITAVISVKVREPQFEGQTKTKLGNSEVRGIIDSCVTEGVGTYLEEHPSIAKRIIEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A++A AA++AR+L R+K+ L S+SLPGKLADCS P E+++VEGDSAGGSAKQ
Sbjct: 383 AIGAMRAREAARKARELTRRKTALESTSLPGKLADCSFKDPSLCELYLVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I A+G G+ GEDF RYH+I
Sbjct: 443 GRDRRFQAILPLRGKILNVEKSRLDKVLSNEEIRAIITAMGTGI-GEDFDLSKARYHRIC 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFFYR+ K L + G +Y+ PPLY+V++ + V+Y Y D EL +
Sbjct: 502 LMTDADVDGSHIRTLLLTFFYRHMKPLIENGYVYIAQPPLYQVKKNRDVRYFYHDNELNR 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDAAEA ++F++LMG
Sbjct: 562 YLEKTGRDGV-TIQRYKGLGEMNPEQLWETTMDPKNRTILQVSLEDAAEAELIFTTLMGD 620
Query: 600 RVDTRKELIQ-NAANLVNLD 618
RV+ R++ IQ +A ++ NLD
Sbjct: 621 RVEPRRDFIQSHAKDVRNLD 640
>gi|1790875|gb|AAB41130.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
Length = 637
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 321/623 (51%), Positives = 438/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG RGLHHLVYEI+DN++DEA AGY S+I+V + DNSV+V+D+GRG+PI +H
Sbjct: 28 MYIGTTGTRGLHHLVYEIVDNSIDEALAGYCSHIKVFIHKDNSVTVSDDGRGMPIGIHHK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++T+LHAGGKFGG + Y VSGGLHGVG SVVNALSE+ EV V +G + Q
Sbjct: 88 MKKPTVEVIMTILHAGGKFGGGA--YRVSGGLHGVGASVVNALSETCEVEVKTEGHIWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGK + + D GT+I F PD ++F ++D++T++ R+RELAFLN
Sbjct: 146 TYHRGKVASPFE----KIGDSDEHGTKIYFKPDPEIFEDT-EYDYDTLSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVD-GITID 237
+ I L E D NE F + GGL+ +V +LN +K+ + + + +D +++
Sbjct: 201 GIKIELTDERHDK-----NEIFHYEGGLKSFVSYLNRNKEVVFKEPIYVEGSIDSNYSVE 255
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ +D Y++ + +AN+I TI+GGTH+ G K +LTR +N KK +K+ D +LSG
Sbjct: 256 IALQY-NDGYNENIFSFANNIHTIEGGTHLAGFKTALTRVINDYAKKFGYLKENDKNLSG 314
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT ++SV++ P+FEGQTKT+LGN EVR +VD + E ++ YLE +P + ++
Sbjct: 315 EDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIVDSIISERVSTYLEENPQIGKLVI 374
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L A +A AAK+AR++ R+KSVL S+SLPGKLADCSS EE EI+IVEGDSAGGSA
Sbjct: 375 DKALVASRAREAAKKAREITRRKSVLESTSLPGKLADCSSKDAEECEIYIVEGDSAGGSA 434
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+RRFQAILPLRGKI+NVE++ + +EEI+ + A G G+ G+DF LRYHK
Sbjct: 435 KQGRNRRFQAILPLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGI-GKDFDVSKLRYHK 493
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDGAHIRTL+LTFFYRY L EG +++ PPLYKV + ++ Y Y D EL
Sbjct: 494 IIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVTKTRKEYYAYSDKEL 553
Query: 538 KKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ V + + IQR+KGLGEM P QLWETT+NPEQR L ++ IEDA A+ +F+ L
Sbjct: 554 EDVLQDVGGKDKNTDIQRYKGLGEMNPEQLWETTMNPEQRTLIKVNIEDAMAADEIFTIL 613
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +VD R++ I +NA +VNLD
Sbjct: 614 MGDKVDPRRKFIEENATKVVNLD 636
>gi|452991700|emb|CCQ96924.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 636
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 441/620 (71%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AG I++ + DNS+ V DNG GIP+++HP
Sbjct: 30 MYIGSTGSRGLHHLVYEVVDNSIDEALAGVCDTIKIVIEKDNSILVEDNGSGIPVEIHPQ 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF ++S Y VSGGLHGVG+SVVNALSE L V RDG EY Q
Sbjct: 90 TGKSTVETVLTILHAGGKF--NNSAYKVSGGLHGVGVSVVNALSEWLIAKVKRDGKEYMQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG PV+ L V GT I F PDK++F + F+ T+ R+RE+AFLN
Sbjct: 148 KFERGVPVSELQI----VGEAKTTGTLINFKPDKEIFD-EVDFNFETLEYRLREMAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L D N ++ + GG++ +V+++N +K P+H D++ F + D I ++LA
Sbjct: 203 GIMIKL----EDRRTNTNRKFHYEGGIKSFVEYINRNKNPIHKDIMYFEAEKDNIVVELA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +DAYS+ + +AN+I T +GGTH+ G++ +LTR +N G+K +K+KD +L G+
Sbjct: 259 MQY-TDAYSENIYTFANNINTQEGGTHLSGLRTALTRAINDYGRKYNYIKEKDENLQGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGL+ ++SV++ P+FEGQTKT+LGN EVR +V+ +++T YLE +P +L K
Sbjct: 318 VREGLSAVLSVKLMEPQFEGQTKTKLGNSEVRGIVESLTYDFITRYLEENPKSGKIVLEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++SA +A AA++AR++ R++S+L +++LPGKLADC S E +EI+IVEGDSAGGSAKQ
Sbjct: 378 AVSASRAREAARKAREISRKRSILDNTTLPGKLADCQSNDLEITEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR +QAILPLRGKILNVE+ + EEI+ +I A G G+ G++F E LRY KII
Sbjct: 438 GRDRGYQAILPLRGKILNVEKARLDRILGYEEIRAMITAFGTGI-GDEFDIEKLRYGKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L D G +Y+ PPLYKV +G+ Y Y D EL+K
Sbjct: 497 IMTDADVDGAHIRTLLLTFFFRYMRELLDNGHVYIAQPPLYKVSKGRAEHYVYSDNELEK 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + YSIQR+KGLGEM P QLWETT++PE+R+L Q+ +ED A+ +F++LMG
Sbjct: 557 LLEEI-GRSNYSIQRYKGLGEMNPEQLWETTMDPEKRILLQVTVEDGLVADEIFTTLMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V R+E IQ A LV NLD
Sbjct: 616 KVKPRREFIQKNAKLVKNLD 635
>gi|381210628|ref|ZP_09917699.1| DNA gyrase subunit B [Lentibacillus sp. Grbi]
Length = 641
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 307/619 (49%), Positives = 429/619 (69%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN++DEA AG+ I++ + DNS++V DNGRGIP+D+
Sbjct: 33 MYIGTTSERGLHHLVWEIVDNSIDEALAGFCDKIQLVIEKDNSITVIDNGRGIPVDIQKK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALE ++TVLHAGGKF S+ Y VSGGLHGVG SVVNALS SL+V V RDG Y+
Sbjct: 93 TGKPALEVIMTVLHAGGKF--SNDSYKVSGGLHGVGASVVNALSSSLDVYVHRDGNIYYL 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G P + + D GT+ +F PD ++F + +F+ + R+RELAFLN
Sbjct: 151 GFQKGVPQGKIET----IGETDITGTKTQFKPDPEIFVESTEFNFELLEQRVRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI+L + +D E EY + GG+ YV+++N +++ LH+ + D I +++A+
Sbjct: 207 GITISLEDKRTDQEPV---EYHYEGGISSYVKYINRNREVLHEPFYSETEDDQIMVEVAI 263
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D ++ + +AN+I T +GG+H G K+ LTR +N +K+ K+ D +LSG+ V
Sbjct: 264 QY-NDGFASNIYSFANNIHTYEGGSHESGFKSGLTRAINDYARKNSMFKENDPNLSGDDV 322
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+S++ P+P+FEGQTKT+LGN EV+KV D + E +++L +PDV ++ K
Sbjct: 323 REGLTAIVSIKHPDPQFEGQTKTKLGNSEVKKVTDSAFSEAFSKFLFENPDVAKLVVEKG 382
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A LAAK+AR+L R+KS L S+LPGKLADCSS E++IVEGDSAGGSAKQG
Sbjct: 383 LMASRARLAAKKARELTRRKSALEVSNLPGKLADCSSRDASIGELYIVEGDSAGGSAKQG 442
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N+E++ +I ALG G+ GEDF RYHKI+I
Sbjct: 443 RDRHFQAILPLRGKILNVEKARLDKILSNKEVRAMITALGTGI-GEDFDITKARYHKIVI 501
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+++GK Y YDD E++++
Sbjct: 502 MTDADVDGAHIRTLLLTFFYRYMRPLIEHGYVYIAQPPLYKIQQGKAAHYAYDDKEMERI 561
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ P + +QR+KGLGEM QLWETT++PE R L Q+ + DA +A+ +F LMG +
Sbjct: 562 LNELPKSPKPGLQRYKGLGEMNAEQLWETTMDPETRTLLQVGLSDAMDADNIFDMLMGDK 621
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R+ I +NA + NLD
Sbjct: 622 VEPRRNFIEENAQYVQNLD 640
>gi|383320651|ref|YP_005381492.1| DNA gyrase subunit B [Methanocella conradii HZ254]
gi|379322021|gb|AFD00974.1| DNA gyrase subunit B [Methanocella conradii HZ254]
Length = 635
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 435/620 (70%), Gaps = 17/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY NIEV++ D SV+V D+GRGIP+++H
Sbjct: 30 MYIGSTDERGLHHLVYEVVDNSIDEALAGYCKNIEVSINNDGSVTVNDDGRGIPVEMHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE ++V V R+G Y Q
Sbjct: 90 YHRPALEIVMTMLHAGGKFDNRT--YKVSGGLHGVGVSVVNALSEWMKVEVRRNGRLYVQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP T V + + GTR+ F PD +F T +F ++ +A R+RELAFLN
Sbjct: 148 DYVRGKP----TDEVHEIGTAIGTGTRVTFKPDPTIFETT-EFKYDILANRLRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I +D + + GG+ ++V +LN K PLHD V+ F K D +++A
Sbjct: 203 GIKITF----TDARSGVSEVFHYEGGIVQFVHYLNEGKTPLHDKVIYFEKQKDTTNVEIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ +L +AN+I T +GGTH+ G +++LTR+ N KK+ +K D+ LSG+
Sbjct: 259 MQY-NDGYNEIVLAFANNINTTEGGTHLSGFRSALTRSFNDYAKKNNLLKG-DMVLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ NP+FEGQTKT+LGN EV+ +V+ V E L +YLE +P I+ K
Sbjct: 317 VREGLTAIISVKLTNPQFEGQTKTKLGNSEVQGIVNSLVGEGLDDYLEENPADARKIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A A AA++AR+L R+KS L SS+LPGKLADCS PE+ E+++VEGDSAGGSAKQ
Sbjct: 377 AIQAFHAREAARKARELTRRKSALESSTLPGKLADCSEKDPEKCELYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R +QAILPLRGKILNVE+ + ++EEI+ LI ALG V G++F RYHKII
Sbjct: 437 GRNRMYQAILPLRGKILNVEKARLSKALQSEEIKALITALGTSV-GDEFDISKARYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPL+K+++GK+ +Y Y + EL
Sbjct: 496 LMTDADVDGAHIRTLLLTFFYRYMKPLVEAGYVYIAQPPLFKIKKGKEERYVYSEKELNA 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ Y+IQR+KGLGEM P QLW TT++PE R + ++ +EDAAEA+ +FS LMG
Sbjct: 556 ALDEM-GRSNYTIQRYKGLGEMNPEQLWSTTMDPETRTVLKVTLEDAAEADHIFSVLMGD 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ RK I+ A LV NLD
Sbjct: 615 KVEPRKAFIEKNAKLVRNLD 634
>gi|206900988|ref|YP_002251257.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
gi|206740091|gb|ACI19149.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
Length = 635
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 328/622 (52%), Positives = 443/622 (71%), Gaps = 20/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHL++E++DN++DE AGY I V L D +V VADNGRGIP+D+HP
Sbjct: 29 MYIGDTGVRGLHHLIFELVDNSIDEVMAGYCDYILVELKKDGAVVVADNGRGIPVDIHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K ALE VLT LHAGGKF S+S Y +SGGLHGVGLSVVNALS LEV V RDG ++Q
Sbjct: 89 AKKPALEVVLTTLHAGGKF--SNSIYKISGGLHGVGLSVVNALSSKLEVEVMRDGKIFYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP+T LT D+ GT+I+F+PD ++F T +FD++ +A R+RELAFLNP
Sbjct: 147 VYERGKPITPLTVK----GETDKTGTKIKFYPDPEIFETT-KFDYDIVANRLRELAFLNP 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI LR E + + N + + GGL E++++L+ K+ LH+ + ++ + +++ +
Sbjct: 202 KVTIELRDERT----GRSNIFKYEGGLLEFIEYLSKGKEVLHEPIYMEREEGNLILEIVM 257
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ S Y + +L Y N+I TI+GGTH+ G + +LTR +N+ + K+ + SLSG+ V
Sbjct: 258 QYNS-GYDELILSYVNNIHTIEGGTHVTGFRTALTRVVNNFARSWGLWKENE-SLSGDDV 315
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E LTEY +PD I++K
Sbjct: 316 REGLTAIVSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEEELTEYFSKNPDTGKLIITKI 375
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ A +A AA++AR+LVR+KS+L S+ LPGKLADCS P + E+FIVEG+SAGGSAKQ
Sbjct: 376 IEAYRARQAARKARELVRRKSLLESTLLPGKLADCSEKDPAKCELFIVEGESAGGSAKQA 435
Query: 421 RDRRFQAILPLRGKILNVERKDE-AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDRR+QAILPLRGKILNVE+ + +EEI+ +I +LG G+ G+DF LRYHKII
Sbjct: 436 RDRRYQAILPLRGKILNVEKAQHLTKILSSEEIKAIIASLGTGI-GQDFDLSKLRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G IY+ PPLY + +GK+ +Y Y + E ++
Sbjct: 495 IMTDADVDGAHIRTLLLTFFYRHFRPLIEGGYIYIAQPPLYLLRKGKEERYAYSEEEKEE 554
Query: 540 VKS--SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ +P N IQR+KGLGEM P QL ETT++P++R+L Q+ IEDA EA +FS LM
Sbjct: 555 ILKEWGYPENVY--IQRYKGLGEMDPEQLRETTMDPQKRILLQVTIEDALEAERLFSILM 612
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G V+ R+ I+ A V NLD
Sbjct: 613 GNNVEERRNFIEQKAKFVRNLD 634
>gi|350264106|ref|YP_004875413.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349596993|gb|AEP84781.1| DNA gyrase, B subunit [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 638
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVIDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELVVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV+ L + D GT F PD ++FT ++D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTETTEYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELED 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|295106380|emb|CBL03923.1| DNA gyrase subunit B [Gordonibacter pamelaeae 7-10-1-b]
Length = 656
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 325/637 (51%), Positives = 432/637 (67%), Gaps = 25/637 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DNAVDEA AGY IEV + DNS++V DNGRGIP+D HP
Sbjct: 30 MYIGSTGPRGLHHLVYEVVDNAVDEALAGYCDTIEVWIHPDNSITVDDNGRGIPVDKHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E VLT+LHAGGKFGG GY VSGGLHGVG+SVVNALS +EV+V+++G++Y
Sbjct: 90 EKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSSRVEVSVFKEGVQYDI 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQG--TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFL 178
+ GK T L K R+G T + FWPD +FT +D++T+A R RE+AFL
Sbjct: 148 SFDHGK-----TAEKLREVGKVRRGNGTTVTFWPDPTIFTDTTVYDYDTLASRFREMAFL 202
Query: 179 NPKLTIALRKEDSDP-------EKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKD 230
N L I L E +P E F +AGG+ ++V++LN K+ L+ + F +
Sbjct: 203 NKGLKIILHDERVNPGSTLSDLAPEPRTEVFQYAGGIVDFVKFLNEGKETLNKPIYFEAE 262
Query: 231 VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKD 290
D T+++A+QW S +++++ +AN+I T +GGTH++G K ++TRT+N + +K+
Sbjct: 263 NDDGTVEVAMQWSSSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRTINEYARAKGILKE 322
Query: 291 KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHP 350
KD +LSG+ REG IISV++ +P+FEGQTKT+LGN E+R +V +V + L EYLE +P
Sbjct: 323 KDSNLSGDDTREGCAAIISVKLHDPQFEGQTKTKLGNTEIRPLVQNAVTQGLAEYLEENP 382
Query: 351 DVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEG 410
I+ K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS TP +SEIFIVEG
Sbjct: 383 KPAKRIIDKATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSKTPADSEIFIVEG 442
Query: 411 DSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK 470
DSAGGSAKQ RDR+ QAILPLRGKILNVER ++ I +LI A+G + G+DF
Sbjct: 443 DSAGGSAKQARDRKTQAILPLRGKILNVERAGLHRSLSSDTISSLITAIGTNI-GDDFDA 501
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY----KVERGK 526
+ RYH+III+TDADVDGAHIR LLLTFFYRY L + G IY+ PP++ K R
Sbjct: 502 DQARYHRIIIMTDADVDGAHIRCLLLTFFYRYMPELINRGYIYIAQPPIFGLKKKNSRSP 561
Query: 527 QVQ-YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
+++ Y YD++ L V + + + + +QR+KGLGEM P QLWETT+ PE R L Q+ I+D
Sbjct: 562 KIERYIYDESALGSVLAEYDNPDKFDVQRYKGLGEMDPDQLWETTMEPETRTLLQVNIDD 621
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
AAEA V S LMG +V+ RKE IQ A V LDI
Sbjct: 622 AAEAERVVSELMGDQVEPRKEFIQKHARDVRF--LDI 656
>gi|126179353|ref|YP_001047318.1| DNA gyrase, B subunit [Methanoculleus marisnigri JR1]
gi|125862147|gb|ABN57336.1| DNA gyrase subunit B [Methanoculleus marisnigri JR1]
Length = 656
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 333/641 (51%), Positives = 439/641 (68%), Gaps = 33/641 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNAVDEA AG+ I+V + D SVSV DNGRGIP+DL P
Sbjct: 25 MYIGSTESRGLHHLVYEVVDNAVDEALAGFCDLIQVTVNRDGSVSVDDNGRGIPVDLMPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L+ TV++DG Y
Sbjct: 85 YGKSALEIVLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSSWLDATVFKDGNVYAM 142
Query: 121 KYSRG---KPVTTL--TCHVL--------------PVDSKDRQGTRIRFWPDKQVFTTAI 161
++ +G KP+ + T H + P+D + +GTRI F PD+ +F T +
Sbjct: 143 QFRQGLVAKPLASRPETEHEMEARYEERYGARDGQPLDYERLRGTRITFQPDRSIFET-V 201
Query: 162 QFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL 221
+FD++ + R+RELA+LN LTI LR D Y F G+ ++V L K+ L
Sbjct: 202 EFDYDVLDHRLRELAYLNSGLTIVLR----DERTGDVVTYCFEDGIRQFVAHLGEGKESL 257
Query: 222 HDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 278
HD + + + D + +++ALQ+ +++YS+T+ Y NS+ T +GGTH+EG +++LTR +
Sbjct: 258 HDDIIYFQKRDSESKVEVEVALQY-NNSYSETIYTYVNSVNTREGGTHLEGFRSALTRAI 316
Query: 279 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 338
NS ++ +K+ D + GE VREGL C+IS RV NP+FEGQTK RLGN VR +VD V
Sbjct: 317 NSAAHRNNLLKNNDAQVKGEDVREGLACVISTRVANPQFEGQTKMRLGNSNVRGIVDSLV 376
Query: 339 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 398
LTEY E HP L +++ K+++A +A AA+ AR+L R+KS L S+ LPGKLADC
Sbjct: 377 YSSLTEYFEEHPKTLQTVVDKAMAAARAREAARTARELARRKSTLESTGLPGKLADCQER 436
Query: 399 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 458
P +SE++IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ E + KN EIQ LI A
Sbjct: 437 DPAKSELYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKASEHKILKNAEIQALISA 496
Query: 459 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 518
+G GV G+ F E RYH+II++TDADVDGAHIRTLLLTFFYRY L + G IY+ PP
Sbjct: 497 IGTGV-GDSFDAERARYHRIILMTDADVDGAHIRTLLLTFFYRYMVGLVENGYIYIAQPP 555
Query: 519 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 578
LY+V +G+Q QY Y + E++++ + + + SIQR+KGLGEM QLW TT++P R+L
Sbjct: 556 LYRVAKGRQEQYVYREEEMREILAEWGEKGV-SIQRYKGLGEMNAGQLWSTTMDPANRIL 614
Query: 579 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 618
KQ+ IEDAA AN +F LMG VD R++ I+ A V NLD
Sbjct: 615 KQVKIEDAAYANEIFEKLMGENVDARRDFIRRHAKEVSNLD 655
>gi|147921290|ref|YP_684896.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
gi|110620292|emb|CAJ35570.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
Length = 635
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 437/620 (70%), Gaps = 17/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + I+V + + SV+V DNGRGIP+++H
Sbjct: 30 MYIGSTDYRGLHHLVYEVVDNSIDEALAGYCNAIDVTINPNGSVTVTDNGRGIPVEMHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K ALE V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V R+G + Q
Sbjct: 90 YKKPALEIVMTILHAGGKFDNRT--YKVSGGLHGVGVSVVNALSEYLEVEVKRNGKVFFQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKPV C V + D+ GT+ F PDK +F T ++F + +A R+RELA+LN
Sbjct: 148 RYEKGKPV----CEVKIIGETDQTGTKTTFKPDKSIFET-VEFQFDILANRLRELAYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L SD + EY + GG+ +++++LN DK LH + F ++ D ++++
Sbjct: 203 GIRITL----SDLGAQKSAEYHYEGGINQFIEYLNQDKTVLHPKPIYFEREKDTTKVEIS 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YS+ +L +AN+I T +GGTH+ G +A+LTRT+N +K+ +K D+ LSGE
Sbjct: 259 MQY-NDGYSEVILAFANNINTHEGGTHLSGFRAALTRTVNDYARKNNMLKG-DMVLSGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ NP+FEGQTKT+LGN +V+ +V+ V + L +YLE +P I+ K
Sbjct: 317 IREGLTAIISVKLTNPQFEGQTKTKLGNSDVKGIVESLVGDGLNDYLEENPADARKIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+KS L S+LPGKLADCS + E++IVEGDSAGGSAKQ
Sbjct: 377 TVQAFQAREAARKARELTRRKSALEGSTLPGKLADCSEKDASKCELYIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVE+ + ++ EI+ LI ALG GV GEDF + RYHKII
Sbjct: 437 GRNRLFQAILPLRGKILNVEKARLNKILESAEIRALITALGTGV-GEDFVLDKARYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLY++++GK+ +Y Y D EL +
Sbjct: 496 LMTDADVDGAHIRTLLLTFFYRYMQQIVEAGFVYIAQPPLYRIKKGKEEKYVYSDRELNE 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + SIQR+KGLGEM P QLW TT++P R + Q+ +ED EA+ F+ LMG
Sbjct: 556 ALEAMGRTNV-SIQRYKGLGEMNPEQLWSTTMDPATRTMYQVKLEDVIEADRTFTLLMGD 614
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+E I +NA + NLD
Sbjct: 615 KVEPRREFIVKNAKFVKNLD 634
>gi|403382763|ref|ZP_10924820.1| DNA gyrase subunit B [Paenibacillus sp. JC66]
Length = 636
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 431/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AG+ I+V + DNS++V DNGRGIP+ ++
Sbjct: 28 MYIGSTSSKGLHHLVWEVVDNSIDEALAGFCDRIDVIIHKDNSITVIDNGRGIPVGMNTK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE + V V RDG Y Q
Sbjct: 88 LQKSTLEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHVIVQVSRDGKIYQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V V +R GT+ F PD ++F ++++ + RIRELAFLN
Sbjct: 146 EYRRGIP----QYDVKVVGDTERTGTKTTFLPDPEIFKETTVYEYDILQSRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I + E +D EKN + + GG++ +V++LN ++ LHD + + D I +++A
Sbjct: 202 GIEINILDERTD-EKNSFK---YDGGIKSFVEYLNEKREVLHDEPIYTEGTKDNIQVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D++++ + +AN+I T +GGTH G K++LTR LN +KS ++KD D +L+G+
Sbjct: 258 LQY-NDSFTENIYSFANNINTHEGGTHESGFKSALTRILNDYARKSNSIKDSDANLTGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE HP V I+ K
Sbjct: 317 VREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFSEKLQEFLEEHPSVSRKIMEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AA++AR+L R+K+ L SSLPGKLADCSS SEI+IVEGDSAGGSAKQ
Sbjct: 377 GIQAARAREAARKARELTRRKNALEVSSLPGKLADCSSKDASISEIYIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ G DF RYHK+I
Sbjct: 437 GRDRHFQAILPLRGKILNVEKARLDKILSNAEIRAIITALGTGI-GADFDISKARYHKVI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ER K V+Y Y++ + ++
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLYKLERNKIVRYAYNEKQREE 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ F ++QR+KGLGEM QLWETT++PE R Q+ I+DA EA+ VF +LMG
Sbjct: 556 ITKEFGEGTKINVQRYKGLGEMNASQLWETTMDPESRTFLQVTIQDAIEADRVFDTLMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 616 NVEPRRDFIQEHAKYVTNLD 635
>gi|296330042|ref|ZP_06872526.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672704|ref|YP_003864375.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
gi|296153081|gb|EFG93946.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410947|gb|ADM36065.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
Length = 638
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVIDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELVVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV+ L + D GT F PD ++FT +D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVSDLEI----IGETDHTGTTTHFVPDPEIFTETTVYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAALETFMLENPDAAKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELED 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|424780808|ref|ZP_18207678.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
gi|422842733|gb|EKU27182.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
Length = 646
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 317/623 (50%), Positives = 430/623 (69%), Gaps = 15/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+A+ I+V + DNS++V DNGRGIP+D+
Sbjct: 33 MYIGSTSEQGLHHLVWEIVDNSIDEALAGFATKIDVIIEEDNSITVIDNGRGIPVDIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG SVVNALS SL+V V+++G Y Q
Sbjct: 93 TGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGSSVVNALSTSLDVKVYKNGHIYFQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+ V L + DR+GT + F PD +F F+ +T+A R+RELAFLN
Sbjct: 151 EYKRGQVVDDLKI----IGDTDRRGTEVHFVPDPTIFKETTVFNFDTLATRVRELAFLNR 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
L I + ED + Q EY + GG+ YV++LN +K+ L + + + + ITI++A
Sbjct: 207 GLKITI--EDKRKGQEQQREYHYEGGICSYVEFLNDEKEVLFEPPIYCEGEQNNITIEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y +L +AN+I T +GG H G K++LTR +N+ ++ K +K+ D L GE
Sbjct: 265 MQYTS-GYQSKILSFANNIHTYEGGMHESGFKSALTRVINNYARRQKMIKENDDKLMGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P P+FEGQTKT+LGN EVR V D+ E ++L +P+V ++ K
Sbjct: 324 VREGLTAVISIKHPEPQFEGQTKTKLGNSEVRSVTDRLFAEAFDKFLMENPNVAKKVVEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A KA LAAKRAR+ R+K+ L S+LPGKLADCSS E+ E+FIVEGDSAGGSAKQ
Sbjct: 384 ALLATKARLAAKRAREATRKKNELEISNLPGKLADCSSREAEKCELFIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR +QAILP+RGKILNVE+ + NEEI++L A+G G G+DF E RYHK++
Sbjct: 444 GRDRNYQAILPIRGKILNVEKATLDKILANEEIRSLFTAMGTGF-GKDFDVEKARYHKLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD--DAE- 536
I+TDADVDGAHIR LLLT FYRY + L ++G +Y+ PPLY V++GK + Y DAE
Sbjct: 503 IMTDADVDGAHIRILLLTLFYRYMRPLVEKGYVYIAQPPLYGVKQGKNITYVPSGKDAED 562
Query: 537 -LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L++V S P +QR+KGLGEM QLWETT++PE R + ++ I+DA EAN +F
Sbjct: 563 QLQQVLQSLPKTPKPIVQRYKGLGEMDEDQLWETTMDPEHRAMARVTIDDAEEANRIFEM 622
Query: 596 LMGARVDTRKELIQNAANLVNLD 618
LMG +V+ R++ I+ A+ +D
Sbjct: 623 LMGDQVEPRRQFIEENAHYATID 645
>gi|257789784|ref|YP_003180390.1| DNA gyrase subunit B [Eggerthella lenta DSM 2243]
gi|317489247|ref|ZP_07947764.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325832276|ref|ZP_08165275.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
gi|257473681|gb|ACV54001.1| DNA gyrase, B subunit [Eggerthella lenta DSM 2243]
gi|316911648|gb|EFV33240.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325486112|gb|EGC88566.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
Length = 648
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/629 (51%), Positives = 428/629 (68%), Gaps = 15/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DNAVDEA AGY I+V + DNS+SV DNGRGIPID HP
Sbjct: 28 MYIGSTGPRGLHHLVYEVVDNAVDEALAGYCDEIKVWIHQDNSISVDDNGRGIPIDKHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E VLT+LHAGGKFGG GY VSGGLHGVG+SVVNALS +EV V ++G EY
Sbjct: 88 EKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSSRVEVQVRKEGKEYFI 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ GK L V P +K GT + FWPD ++FT +D +T+A R RE+AFLN
Sbjct: 146 GFDHGKTSEKLR-EVGP--TKRGNGTTVSFWPDPEIFTETTVYDFDTLANRFREMAFLNK 202
Query: 181 KLTIALRKED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
L I L E +D + E F +AGG+ ++V++LN K+ L+ + F + D T+++
Sbjct: 203 GLKIVLYDERVTDADGKPRTEVFQYAGGIVDFVKFLNEGKETLNKPIYFEAENDDGTVEV 262
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QW + +++++ +AN+I T +GGTH++G K ++TRT+N + +K+KD +LSG+
Sbjct: 263 AMQWSTSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRTINEYARSKGILKEKDSNLSGD 322
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REG I+SV++ +P+FEGQTKT+LGN E+R +V +V + L EYLE +P I+
Sbjct: 323 DTREGCAAIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAVTQGLAEYLEENPTPAKRIIG 382
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS TPE SE+FIVEGDSAGGSAK
Sbjct: 383 KATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSKTPENSELFIVEGDSAGGSAK 442
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDR+ QAILPLRGKILNVER ++ I +LI A+G + G+DF + RYH+I
Sbjct: 443 QARDRKTQAILPLRGKILNVERAGLHRSLSSDTISSLITAIGTNI-GDDFDADQSRYHRI 501
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY----KVERGKQVQ-YCYD 533
II+TDADVDGAHIR LLLTFFYRY L + G IY+ PP++ K R +++ Y YD
Sbjct: 502 IIMTDADVDGAHIRILLLTFFYRYMPELINRGYIYIAQPPIFGLKKKNSRSPKIERYIYD 561
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
++ L V + + + +QR+KGLGEM P QLWETT+ P R L Q+ I+DAAEA V
Sbjct: 562 ESSLGSVLAEYDDPNKFDVQRYKGLGEMDPDQLWETTMEPATRTLLQVSIDDAAEAERVV 621
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
S LMG +V+ RKE IQ A V LDI
Sbjct: 622 SDLMGDQVEPRKEFIQKHARDVRF--LDI 648
>gi|398309108|ref|ZP_10512582.1| DNA gyrase subunit B [Bacillus mojavensis RO-H-1]
Length = 638
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 431/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINILIEKDNSITVIDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+RG PV+ L + D GT F PD ++FT +++++ +A R+RELAFL
Sbjct: 146 VYNRGIPVSDLEV----IGETDHTGTTTHFVPDPEIFTETTEYEYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDGYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAALETFMLENPDAARKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLQTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|281411537|ref|YP_003345616.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
gi|281372640|gb|ADA66202.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
Length = 636
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/630 (51%), Positives = 440/630 (69%), Gaps = 25/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDEA AGY I V L D SV V DNGRGIP+D+HP
Sbjct: 24 MYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVTLHEDGSVEVEDNGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q
Sbjct: 84 EGRSALEVVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P
Sbjct: 142 RYERGKPVTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDVLEHRLREIAFLVP 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------D 232
L I E D + + F GG+ EYV++LN KK HDV+ ++ D
Sbjct: 197 GLKI----EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKVFHDVIYMKRTEKVQTKNGED 252
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
+ +++A Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K LTR +N GKK +K D
Sbjct: 253 EVIVEIAFQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKTMLTRLMNEYGKKHGFLKGDD 311
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
S GE VREGLT ++SV V NPEFEGQTK++LGN EV++ +++ +++ L + + +P++
Sbjct: 312 -SFQGEDVREGLTAVVSVYVKNPEFEGQTKSKLGNEEVKEAINRVMRDELKKIFDANPEL 370
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
+ +ILSK +S +A AA+RAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDS
Sbjct: 371 VKTILSKIMSTKQAREAARRAREMVRRKNVLQNTTLPGKLADCSSTDREKTELFIVEGDS 430
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF +
Sbjct: 431 AGGSAKQARDREFQAVLPIRGKILNVEKSSLDKLLKNEQISDIIVAVGTGI-GDDFDEGK 489
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY +III+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ GK+ Y Y
Sbjct: 490 LRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGKEEFYVY 549
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL + K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +
Sbjct: 550 SDLELMEYKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRL 608
Query: 593 FSSLMGARVDTRKELIQNAANLVNLDHLDI 622
F LMG +R+E I+ A + + LDI
Sbjct: 609 FEILMGNDPSSRREFIERHA--LKVKELDI 636
>gi|392391698|ref|YP_006428300.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
gi|390522776|gb|AFL98506.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
Length = 644
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 435/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST PRGLHHLVYEI+DN++DEA AGY IEV + DNS+SV DNGRGIP+D+HP
Sbjct: 36 MYIGSTSPRGLHHLVYEIVDNSIDEALAGYCDTIEVTIHKDNSISVVDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKF GS+ Y VSGGLHGVG+SVVNALS L V V +DG YHQ
Sbjct: 96 LGKPAVEVALTVLHAGGKFSGSA--YKVSGGLHGVGMSVVNALSTWLHVEVKKDGNIYHQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK T L V+ +++ GT I F PD ++F + F +T+A R+REL+FLN
Sbjct: 154 EFMRGKTKTELA--VIGQIDQNQTGTTITFSPDPEIFEDTV-FHFDTLAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
K++I L E D ++ Y+ GG+ ++V+++N K+ LH + + F + DG+ ++++
Sbjct: 211 KVSITLIDEREDKKE----VYYHTGGIYDFVKYINRSKEALHPEPIYFEAEKDGVQVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + YAN+I T +GGTH G KA+LTR N +K+ +K + +LSGE
Sbjct: 267 MQY-NDGYVENLFSYANNIHTHEGGTHESGFKAALTRVANEYARKNNILKANEANLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP P+FEGQTKT+LGN E+R +VD E LT +LE +P ++ K
Sbjct: 326 IREGLTAVISVKVPEPQFEGQTKTKLGNSEIRSIVDSITGEGLTVFLEENPATGKKVIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+KS L S+LPGKLADCS E E++IVEGDSAGGSAKQ
Sbjct: 386 SIQASRAREAARKARELTRRKSALEVSALPGKLADCSWKEAELCEMYIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + N EI+ +I A+G G+ EDF E RYHK++
Sbjct: 446 GRDRRFQAILPLRGKILNVEKARLDRILSNAEIRAMITAMGTGI-SEDFDIEKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIR LLLTFF+RY K L + +Y+ PPL+KV++GK + Y Y + EL K
Sbjct: 505 IMTDADVDGAHIRILLLTFFFRYMKPLIENNYVYIAQPPLFKVKKGKDIHYVYSNEELAK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ + + IQR+KGLGEM QLWETT++P +R + Q+ +EDA +A+ +F+ LMG
Sbjct: 565 LQDEIGRDRV-EIQRYKGLGEMNAEQLWETTMDPAKRTILQVTMEDAIKADELFTILMGD 623
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R+E IQ+ A V NLD
Sbjct: 624 VVEPRREFIQDNAQYVRNLD 643
>gi|443631606|ref|ZP_21115787.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443349411|gb|ELS63467.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 638
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVTDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D GT F PD ++FT +D++ +A R+RELAFL
Sbjct: 146 TYKRGVPVADLEI----IGETDHTGTTTHFIPDPEIFTETTVYDYDLLANRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAAMETFMLENPDAAKKIVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|260655480|ref|ZP_05860968.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
gi|260629928|gb|EEX48122.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
Length = 640
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/624 (51%), Positives = 438/624 (70%), Gaps = 23/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHH VYEI+DN+VDE+ AGY +I V + D SVSV D+GRGIP+++H
Sbjct: 33 MYIGDTTVRGLHHCVYEIVDNSVDESLAGYCGHITVTIGTDESVSVTDDGRGIPVEIHHQ 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTVWRDG EY Q
Sbjct: 93 TGKSTVETVLTVLHAGGKFDNRS--YKVSGGLHGVGVSVVNALSEWLEVTVWRDGYEYFQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PV L LP R+GTR+RF D Q+F +Q+ T+ R RE+AFL P
Sbjct: 151 RYERGIPVAPL-AKTLP---STRRGTRVRFLADSQIFD-EVQYSAETLVSRFREMAFLIP 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
LTI + D + + + GG+ E+V++LN D+ L V G R DG+++
Sbjct: 206 GLTITV----EDQREGKTWTFCEEGGIAEFVRYLNRDRVVLFPEPLVVSGER---DGVSV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A Q+ +D Y++ + +AN I T++GGTH+ G++++LTR +N +++ +++KD +LS
Sbjct: 259 EMAFQY-TDDYNERLFSFANLIHTVEGGTHVAGLRSALTRAVNEGARRAGALREKDENLS 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLTC++SV++ NP+FEGQTKT+LGN V+ VD + + L + + L I
Sbjct: 318 GEDLREGLTCVVSVKLSNPQFEGQTKTKLGNGTVKGSVDSVIYDGLLGHFDEDSSALKPI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A +A AAK+AR+LVR KS + SLPGKLADCSS EE E++IVEGDSAGGS
Sbjct: 378 VDKAVKARQAREAAKKARELVR-KSAMSGLSLPGKLADCSSKKAEECEVYIVEGDSAGGS 436
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + ++EI+ +I+ALG G+ G++F LRYH
Sbjct: 437 AKQGRDRSFQAILPLRGKILNVEKARLDKILSSKEIRVIIQALGCGI-GDEFDLSKLRYH 495
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHI TLLLTFF+R+ K L +EG +Y+ VPPLY+V+ GK+V Y Y D +
Sbjct: 496 KIIIMTDADVDGAHISTLLLTFFFRHMKELVEEGHVYLAVPPLYRVQSGKKVDYLYSDRQ 555
Query: 537 LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ + S+ ++QR+KGLGEM P QLWETT++P R+LK++ ++DA A+ FS
Sbjct: 556 LRTLMDSYEVEGKSPAVQRYKGLGEMNPEQLWETTMDPATRLLKRIQVDDAIAADEYFSI 615
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ IQ A+ V NLD
Sbjct: 616 LMGDKVEPRRDFIQTHAHEVRNLD 639
>gi|354559350|ref|ZP_08978600.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
gi|353542939|gb|EHC12399.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
Length = 644
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 435/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IEV + DN++ V DNGRGIP+D+HP
Sbjct: 37 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCDTIEVIIRKDNTICVKDNGRGIPVDIHPK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKF ++S Y VSGGLHGVGLSVVNALS+ L V V +DG YHQ
Sbjct: 97 LGKPAVEVALTVLHAGGKF--NNSAYKVSGGLHGVGLSVVNALSKWLYVDVKKDGKMYHQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK +T LT + + GT+I F PD ++F F+ + +A R+REL+FLN
Sbjct: 155 EYERGKTMTELTI----IGESEGSGTQITFAPDPEIFEETTVFEFDILAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
K++I L D K++ Y+ GG+ ++V+++N +K LH + F D + +++
Sbjct: 211 KVSITL----IDERKDEREVYYHTGGIIDFVKYINKNKDVLHPQPIYFESFKDNVEVEIG 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + YAN+I T +GGTH G KA+LTR +N +K+ +K D +LSG+
Sbjct: 267 IQY-NDSYTENLFSYANNINTQEGGTHEAGFKAALTRVVNDYARKNNIIKANDANLSGDD 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T +ISV+VP P+FEGQTKT+LGN E+R +VD V E L +LE +P V ++ K
Sbjct: 326 IREGMTAVISVKVPEPQFEGQTKTKLGNSEIRSIVDSIVGEGLNIFLEENPAVGKKVIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL AL+A AA++AR+L R+KS L SSLPGKLADCS P+ E+++VEGDSAGGSAKQ
Sbjct: 386 SLQALRAREAARKARELTRRKSALEVSSLPGKLADCSWKEPDLCEMYLVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + N EI+ +I A+G G+ +DF + RYHK+I
Sbjct: 446 GRDRRFQAILPLRGKILNVEKARLDRILGNAEIRAMITAMGTGI-SDDFDLDKARYHKLI 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIR LLLTFFYR+ K L D G +Y+ PPLY+V++G+ V Y Y D EL K
Sbjct: 505 IMTDADVDGAHIRILLLTFFYRFMKPLIDNGYVYIAQPPLYQVKKGRDVSYQYTDVELSK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ IQR+KGLGEM P QLWETT++P +R + Q+ ++DA A+ +F+ LMG
Sbjct: 565 ALDRVGRDKAV-IQRYKGLGEMNPEQLWETTMDPAKRTILQVTMDDAMIADELFTKLMGD 623
Query: 600 RVDTRKE-LIQNAANLVNLD 618
+V+ R+E +I+ A ++ NLD
Sbjct: 624 KVEPRREFIIKYAKDVRNLD 643
>gi|70725006|ref|YP_251920.1| DNA gyrase subunit B [Staphylococcus haemolyticus JCSC1435]
gi|68445730|dbj|BAE03314.1| DNA gyrase (topoisomerase II) subunit B [Staphylococcus
haemolyticus JCSC1435]
Length = 644
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 429/619 (69%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVHRNDTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V S D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + + Y + GG++ YV+ LN +K+P+H+ + + D + I++A
Sbjct: 208 GISITLRDEREDVEQRE-DTYHYEGGIKSYVELLNENKEPIHEEPIYIHQTKDDVEIEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 MQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRILNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ E+ +L HP+V ++ K
Sbjct: 326 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRLFAEHFERFLYEHPNVARIVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKKPEESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLAQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELSPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|336477181|ref|YP_004616322.1| DNA gyrase subunit B [Methanosalsum zhilinae DSM 4017]
gi|335930562|gb|AEH61103.1| DNA gyrase, B subunit [Methanosalsum zhilinae DSM 4017]
Length = 634
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 430/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AG+ ++I+V + D SV++ DNGRGIP+D HP
Sbjct: 27 MYIGSVDSRGLHHLVYEVVDNSIDEALAGFCTSIDVIINPDGSVTIIDNGRGIPVDTHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T+LHAGGKF S+ Y VSGGLHGVG+SVVNALSE + V V R+G Y Q
Sbjct: 87 YGKSALEVVMTILHAGGKFDKST--YKVSGGLHGVGVSVVNALSEWMIVEVKRNGKHYLQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P + + D GT I+F PD +F + + ++T++ R+RELAFLN
Sbjct: 145 KYKRGIPEEDVAL----IGEADGSGTIIKFKPDSTIFE-ELDYSYDTLSSRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I++ SD E + +Y GG+ +V LN +++ LHD + ++ D I +++A
Sbjct: 200 GIRISIGDRRSDEESKETFQY--EGGIRSFVDHLNKNRQTLHDDPIYLEREKDNIMVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GGTH+ G K++LTR N KK+ KD D LSGE
Sbjct: 258 MQY-TDTYAEHVYSFANNINTHEGGTHLIGFKSALTRVTNDYIKKNNLTKD-DSKLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKTRLGN E++ +V+ V E L+++ E +P + + I+ K
Sbjct: 316 VREGLTAIISVKIPEPQFEGQTKTRLGNSELKGIVESLVSESLSDFFEENPKIANQIIQK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SLSA +A AAK+AR+L R+KS L S+LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 376 SLSAKRAREAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVSELYLVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP RGKI+NVE+ + KN+EI +LI ALG G+ G+DF RYHKII
Sbjct: 436 GRNRAFQAILPFRGKIINVEKSRLGKILKNKEILSLITALGTGL-GDDFDISKTRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTF +RY L D G +Y+ PPLYK+++GK Y Y + ELK+
Sbjct: 495 IMTDADVDGAHIRTLILTFIFRYMTPLIDAGYVYIAQPPLYKIKKGKAEHYAYTEKELKQ 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S QR+KGLGEM P QLWETT++PE R L ++ ++DA A+ +FS LMG
Sbjct: 555 KLKQLGEKGI-SYQRYKGLGEMNPEQLWETTMSPETRTLLKVTMDDAVTADEIFSILMGD 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RKE IQ +A +VNLD
Sbjct: 614 EVAPRKEFIQAHAREVVNLD 633
>gi|374578727|ref|ZP_09651821.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
gi|374414809|gb|EHQ87244.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
Length = 644
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 433/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG RGLHHLVYEI+DN++DEA AG+ I+V + DNS++V DNGRGIP+D+HP
Sbjct: 36 MYIGTTGLRGLHHLVYEIVDNSIDEALAGFCDKIDVFIHEDNSITVVDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K A+E LTVLHAGGKFGGS S Y VSGGLHGVGLSVVNALSE L V V + G Y Q
Sbjct: 96 TGKPAVEVALTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSEWLVVEVSKGGHVYRQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y++GKP T L + + + + GT+I+F PD ++F + +D N +A R+REL+FLN
Sbjct: 156 EYAKGKPTTEL----IKIRTNETSGTKIKFMPDSEIFEDTV-YDFNILAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+TI L +D N + +GG++++V +LN K LH + + D + +++
Sbjct: 211 SITINL----ADERSNVKETFLHSGGIQDFVIYLNKSKDCLHPLPIYIETTKDNVQVEVC 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +LSG+
Sbjct: 267 IQY-NDSYAENLFSYANNINTQEGGTHEAGFKSALTRVVNDYARKNNMLKATDSNLSGDD 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD + E LT +LE +P + + K
Sbjct: 326 IREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLTIFLEENPAIARKFIDK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQ
Sbjct: 386 SVQAARARDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + N EI+ +I A+G G+ +DF RYHK+I
Sbjct: 446 GRDRRFQAILPLRGKILNVEKARLDKILGNAEIRAMITAMGTGI-SDDFDIAKARYHKLI 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + +Y+ PPL+K+++G+ +QY Y D EL
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRYMRPLIENNYVYIAQPPLFKIKKGRDIQYVYSDVELTN 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + IQR+KGLGEM P QLWETT++P R + ++ +EDA +FS LMG
Sbjct: 565 TLEKIGRDKV-EIQRYKGLGEMNPDQLWETTMDPANRTILRVTMEDAMRTEEMFSVLMGD 623
Query: 600 RVDTRKELIQN-AANLVNLD 618
+V+ R++ I A ++ NLD
Sbjct: 624 KVEPRRDFINRYAKDVRNLD 643
>gi|342216026|ref|ZP_08708673.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586916|gb|EGS30316.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 640
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 321/625 (51%), Positives = 441/625 (70%), Gaps = 20/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLVYE++DN++DEA AG I++ L DN VS+ DNG GIP+++HP
Sbjct: 28 MYIGSTGPKGLHHLVYEVVDNSIDEALAGICDTIQIQLEKDNWVSIIDNGSGIPVEIHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L TV RDG Y Q
Sbjct: 88 TGKSTVETVLTILHAGGKF--NNGAYKVSGGLHGVGVSVVNALSKHLIATVKRDGKIYQQ 145
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
++S+G +T L TC K+ GT+I F PD+++FT +F + +A R RE+A
Sbjct: 146 EFSKGDTLTKLKEIGTC------GKEEHGTKISFCPDEEIFTETTEFSYEVLAKRFREMA 199
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGIT 235
FLN + I + +K Y+ + GG++ +V++LN K P+H V + + V +GI+
Sbjct: 200 FLNKGVKIVFEDQRETEKKETYH---YEGGIKSFVEFLNKKKTPVHQEVIYMEQVKEGIS 256
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +++LTR++N G++ +K+K+ +L
Sbjct: 257 VEVAMQY-TDSYSENILTFANNIHTEEGGTHLSGFRSALTRSINEYGRQYNLIKEKEENL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SGE VREG+T IISV++P P+FEGQTK +LGN E R +VD V E L +LE +P + +
Sbjct: 316 SGEDVREGITGIISVKLPQPQFEGQTKAKLGNSEARTIVDAVVTENLETFLEENPKISKA 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K+LSA +A AA++ARDL R++S+L S+ LPGKL DC + +EIF+VEGDSAGG
Sbjct: 376 ILQKALSARRAREAARKARDLTRKRSILDSTVLPGKLQDCQLDDNKVTEIFLVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK GRD QAILPLRGKI+NVE+ + ++EI+ +I A G GV G +F E LRY
Sbjct: 436 SAKGGRDHMTQAILPLRGKIMNVEKARLDRILNSDEIKAMITAFGTGV-GSEFNIEKLRY 494
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDD 534
KIII+TDADVDGAHI+TLLLTFF+RY + L + G +YV PPLY ++RG K ++YCY D
Sbjct: 495 GKIIIMTDADVDGAHIQTLLLTFFFRYLRPLIEGGHVYVAQPPLYGIKRGSKVIRYCYSD 554
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
ELK+V + Y I R+KGLGEM QLWETT+NPE R+L ++ IEDA EA+ VF+
Sbjct: 555 DELKRVMDDLGRDNKYKIGRYKGLGEMNADQLWETTMNPEHRILLRVGIEDAQEADEVFT 614
Query: 595 SLMGARVDTRKELIQ-NAANLVNLD 618
LMG+ V R+E IQ NA N+D
Sbjct: 615 MLMGSDVKPRREFIQENAVYAENID 639
>gi|239825589|ref|YP_002948213.1| DNA gyrase subunit B [Geobacillus sp. WCH70]
gi|239805882|gb|ACS22947.1| DNA gyrase, B subunit [Geobacillus sp. WCH70]
Length = 640
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 333/623 (53%), Positives = 439/623 (70%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY + I V + DN +++ DNGRGIP+D+
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTEINVTIEKDNIIAITDNGRGIPVDIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSEELEVYVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T L + DR GT +RF PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 149 KYQRGVPCTDLEV----IGETDRTGTTVRFKPDPEIFTETTEFDYETLATRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L ED E N+ NEY + GG++ YV+ LN ++ LH+ ++G R DGI +
Sbjct: 205 GLKITL--EDKRVE-NRKNEYHYEGGIKSYVKHLNRTREVLHEEPIYIIGER---DGIYV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+YS + + N+I T +GGTH G K +LTR +N +K + +KD D +L+
Sbjct: 259 EIALQY-NDSYSSNIYSFVNNIHTHEGGTHESGFKTALTRIINDYARKHQILKDNDPNLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I
Sbjct: 318 GEDVREGLTAIVSIKHPSPQFEGQTKTKLGNSDARAVTDAIFSEQFETFLLENPTIARKI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 378 VEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDITKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY + + G +Y+ PPLYK+E+GKQV+Y Y+D +
Sbjct: 497 KIIIMTDADVDGAHIRTLLLTFFYRYMREFIERGYVYIAQPPLYKIEQGKQVKYAYNDRQ 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P N +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA EA+ F L
Sbjct: 557 LEKILAELPENPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIEADETFEIL 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENARYVKNLD 639
>gi|373456034|ref|ZP_09547845.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
gi|371934284|gb|EHO62082.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
Length = 649
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 330/621 (53%), Positives = 436/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY ++IEV L D S +V DNGRGIP +H
Sbjct: 41 MYIGSTSARGLHHLVYEVVDNSIDEALAGYCTHIEVTLNDDGSCTVTDNGRGIPTGMH-E 99
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVVNALSE ++V V R+G +
Sbjct: 100 TGKPAMEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSEWMKVVVRREGHFHEM 157
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K SRG +T H+ D GT + F PD Q+F I FD+ T+ R+RELAFLN
Sbjct: 158 KLSRGD----VTEHMRTYGETDETGTSVTFKPDIQIFKEGIDFDYETLKIRMRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
LTI L ++ D +Q + + +AGG+ E+VQ+LN + K L D V+ F + D + +D+
Sbjct: 214 GLTITL-TDNRDGATHQ-DVFHYAGGITEFVQFLN-EGKDLVDPAVIAFEGEKDKVIVDI 270
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ + YS+ M + N I T++GG H+ G + +LTR LN +KS +K + +LSG+
Sbjct: 271 AMQYQT-GYSENMYTFVNDINTVEGGMHLAGFRTALTRVLNDYARKSGILKQNEDNLSGD 329
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ +VD V E L YLE HP +I+
Sbjct: 330 DVREGLTCVISVKVPNPQFEGQTKTKLGNLEVKSIVDNIVSEGLKTYLEEHPQEARAIVE 389
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K ++A +A AA+RAR+L R+K+ L SSLPGKLADC+ P+ +EI+IVEGDSAGGSAK
Sbjct: 390 KGITASRAREAARRARELTRRKNALEVSSLPGKLADCTEKDPKFTEIYIVEGDSAGGSAK 449
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A G GV GEDF LRY+KI
Sbjct: 450 SGRDRRYQAILPLRGKILNVEKARLDRVLNSDAIRTMITAFGTGV-GEDFDITKLRYYKI 508
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PPLY++ +G+Q Y YDD E
Sbjct: 509 IIMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAQPPLYQIRKGRQKYYTYDDDEQN 568
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + +IQR+KGLGEM P QLW+TT+NPEQR++ ++ + DA EA+ +F+ LMG
Sbjct: 569 KMLDEIGRDGC-TIQRYKGLGEMDPEQLWDTTMNPEQRVMLKVELTDAIEADRLFTILMG 627
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+ I ++A + NLD
Sbjct: 628 DKVEPRRRFIEEHAKEVTNLD 648
>gi|424845289|ref|ZP_18269900.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
gi|363986727|gb|EHM13557.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
Length = 640
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/624 (51%), Positives = 438/624 (70%), Gaps = 23/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHH VYEI+DN+VDEA AG+ +I V + D SVSV D+GRGIP+++H
Sbjct: 33 MYIGDTTVRGLHHCVYEIVDNSVDEALAGHCGHITVTIGTDESVSVTDDGRGIPVEIHHQ 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTVWRDG EY Q
Sbjct: 93 TGKSTVETVLTVLHAGGKFDNRS--YKVSGGLHGVGVSVVNALSEWLEVTVWRDGYEYFQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PV L LP R+GTR+RF D Q+F +Q+ T+ R RE+AFL P
Sbjct: 151 RYERGIPVAPL-AKTLP---STRRGTRVRFLADSQIFD-EVQYSAETLVSRFREMAFLIP 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
LTI + D + + + GG+ E+V++LN D+ L V G R DG+++
Sbjct: 206 GLTITV----EDQREGKTWTFCEEGGIAEFVRYLNRDRVVLFPEPLVVSGER---DGVSV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A Q+ +D Y++ + +AN I T++GGTH+ G++++LTR +N +++ +++KD +LS
Sbjct: 259 EMAFQY-TDDYNERLFSFANLIHTVEGGTHVAGLRSALTRAVNEGARRAGALREKDENLS 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLTC++SV++ NP+FEGQTKT+LGN V+ VD + + L + + L I
Sbjct: 318 GEDLREGLTCVVSVKLSNPQFEGQTKTKLGNGTVKGSVDSVIYDGLLGHFDEDSSALKPI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A +A AAK+AR+LVR KS + SLPGKLADCSS EE E++IVEGDSAGGS
Sbjct: 378 VDKAVKARQAREAAKKARELVR-KSAMSGLSLPGKLADCSSKKAEECEVYIVEGDSAGGS 436
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + ++EI+ +I+ALG G+ G++F LRYH
Sbjct: 437 AKQGRDRSFQAILPLRGKILNVEKARLDKILSSKEIRVIIQALGCGI-GDEFDLSKLRYH 495
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHI TLLLTFF+R+ K L +EG +Y+ VPPLY+V+ GK+V Y Y D +
Sbjct: 496 KIIIMTDADVDGAHISTLLLTFFFRHMKELVEEGHVYLAVPPLYRVQSGKKVDYLYSDRQ 555
Query: 537 LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ + S+ ++QR+KGLGEM P QLWETT++P R+LK++ ++DA A+ FS
Sbjct: 556 LRTLMDSYEVEGKSPAVQRYKGLGEMNPEQLWETTMDPATRLLKRIQVDDAIAADEYFSI 615
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ IQ A+ V NLD
Sbjct: 616 LMGDKVEPRRDFIQTHAHEVRNLD 639
>gi|452210943|ref|YP_007491057.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
gi|452100845|gb|AGF97785.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
Length = 634
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 332/620 (53%), Positives = 433/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ S I+V + + SV+V DNGRGIPID HP
Sbjct: 27 MYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEIDVTINPNGSVTVIDNGRGIPIDPHPV 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE EV V RDG +Y Q
Sbjct: 87 HKKSALEVVMTILHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWTEVEVSRDGKKYFQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP V + + D GT+ F PD ++F T F ++ + R+RELAFLN
Sbjct: 145 RYIRGKP----ESDVREIGTSDTTGTKTTFKPDTKIFETT-DFQYDILLNRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A
Sbjct: 200 GLIINL-KDLRSPE-GQAETFNYSGGIIEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ ++ Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+
Sbjct: 258 MQY-TNGYTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DEKLTGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ P+FEGQTKT+LGN EV+ +VD V + L EY E +P V + IL K
Sbjct: 316 VREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSLVTDGLAEYFEENPKVANIILDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KSVL S+LPGKLADCS+ P E EI+IVEGDSAGGSAKQ
Sbjct: 376 ALLAQRAREAAKKARELTRRKSVLEVSTLPGKLADCSNKNPAECEIYIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ A + KN E+ +LI A+G GV EDF E RYHKII
Sbjct: 436 GRDRSFQAILPLRGKILNVEKSRLAKILKNNEVISLITAIGTGV-SEDFDLENARYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT F+RY + L D G +Y+ PPLYK+++GK Y Y D EL
Sbjct: 495 IMTDADVDGAHIRTLLLTLFFRYMRHLIDAGYVYIAQPPLYKIKKGKMDYYAYSDKELAD 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +IQR+KGLGEM P QLWETT++PE R L Q+ +EDA A+ +F LMG
Sbjct: 555 KVKELGEKGV-AIQRYKGLGEMNPGQLWETTMDPESRTLLQVTLEDAIRADEIFRILMGD 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ I+ +A +V+LD
Sbjct: 614 EVEPRRNFIETHAKEVVDLD 633
>gi|255994573|ref|ZP_05427708.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
gi|255993286|gb|EEU03375.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
Length = 651
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 434/621 (69%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN++DEA AG+ + I++ + D S+ V DNGRG+P+D+HP
Sbjct: 40 MYIGSTGKPGLHHLVYEIVDNSIDEALAGHCNEIKICINEDGSIRVEDNGRGMPVDIHPK 99
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E + ++LHAGGKF + GY VSGGLHGVG SVVNALS +EV + R+G Y Q
Sbjct: 100 QKIPAVEVIHSILHAGGKFD-ENGGYKVSGGLHGVGASVVNALSSRMEVKIKRNGNLYKQ 158
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRGK +T L + + G+ F PD Q+F I+FD++T+ R RE+AFLN
Sbjct: 159 EYSRGKTMTKLEI----IGTSTETGSITEFMPDDQIFDD-IEFDYDTLNYRFREMAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L ED + + N Y + GG++E++++ N +K+ LH D++ F K +D +++A
Sbjct: 214 GLKIQL--EDKRKGREKTNTYCYEGGIKEFIKYQNKNKEKLHEDIIFFDKKLDNSQVEVA 271
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YS+T+L YAN+I T +GG H+ G K++LTR +N KK+K + + D SL GE
Sbjct: 272 IQY-TDRYSETLLSYANNINTTEGGYHLSGFKSALTRVINDYAKKAKLIGENDNSLLGED 330
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ NP+FEGQTKT+LGN +R VV+ +V E + +L HP I+ K
Sbjct: 331 VREGLTAIISVKLTNPQFEGQTKTKLGNSFIRGVVETAVNENVYAFLIEHPKQAKIIIEK 390
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + + AAK+ARDL R+K+ L S +LPGKL+DCS P+ SEIF+VEGDSAGGSA+Q
Sbjct: 391 CIKSARVREAAKKARDLTRRKTALDSLALPGKLSDCSEKDPKLSEIFLVEGDSAGGSARQ 450
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QA+LPLRGKILNVE+ + +EEI+N+I A G G+ G+DF+ + LRYHKII
Sbjct: 451 GRDRNRQAVLPLRGKILNVEKARLDKILSSEEIKNMITAFGCGI-GDDFELDKLRYHKII 509
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY L + G +Y PPLYKV++GK+ Y Y + E KK
Sbjct: 510 IMTDADVDGAHIRTLLLTFFYRYMMPLVEAGHVYAAQPPLYKVKKGKKEYYTYSENEQKK 569
Query: 540 VKSSFPSNALYS-IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + S IQR+KGLGEM QLWETT++ ++R L Q+ +EDA+ A+ +F++LMG
Sbjct: 570 LMKNLAEQGGKSDIQRYKGLGEMDYNQLWETTMDYDKRTLIQITVEDASAADDIFTTLMG 629
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V RK+ I +NA + NLD
Sbjct: 630 DKVPPRKKFIEENARYVKNLD 650
>gi|162606284|ref|XP_001713657.1| DNA gyrase subunit B [Guillardia theta]
gi|13794577|gb|AAK39952.1|AF165818_160 DNA gyrase subunit B [Guillardia theta]
Length = 684
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/629 (50%), Positives = 438/629 (69%), Gaps = 15/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
++IGSTG +G HHLVYEI+DN+VDE+ AG+ ++V + +D SV++ DNGRGIP DLHP
Sbjct: 64 VFIGSTGLKGFHHLVYEIVDNSVDESMAGFCEKVDVIINSDKSVTIRDNGRGIPTDLHPI 123
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
TNK+ALETVLT+LHAGGK GY VSGGLHGVG+SVVN LSE L + R+ +
Sbjct: 124 TNKTALETVLTILHAGGK--FGGGGYKVSGGLHGVGVSVVNGLSEYLNINTQRNQRKIGM 181
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK ++ C++ GT I F PD Q+F + FD I GR+ ELAFLN
Sbjct: 182 RFVRGKKISE--CNISSFKKNIINGTTINFKPDYQIFFSEFDFDSYVIGGRLNELAFLNS 239
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + L ED + + + + GG+ EY+ + +KK LH+ + K + I++
Sbjct: 240 NLKLLL--EDRRSKIIKSSLFLHDGGIMEYINEMTINKKRLHNPIILSKIFNNSQIEIGF 297
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
W S+ Y + +L + N+IRT++GGTH++G K +T+ +N L KK K+K S+SGE +
Sbjct: 298 VWSSEQYQENILSFVNNIRTVEGGTHVDGFKQGITKLVNLLSKKKIKSKEKLNSISGEFI 357
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEY-LTEYLELHPDVLDSILSK 359
REGLTC+I+V+ PEFEGQ K++LGNP+++ +V+ ++E ++E + ++L+ +L K
Sbjct: 358 REGLTCLINVKTSEPEFEGQIKSKLGNPDIKFLVENLIKEEGEIHFIENNSNLLNIVLEK 417
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++SA+ A A+K+A++LVR+KS+L +LPGKL+DCS P+ SEIFIVEGDSAGGSAKQ
Sbjct: 418 AISAMNAYEASKKAKELVRKKSILEGITLPGKLSDCSEKNPQFSEIFIVEGDSAGGSAKQ 477
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDRRFQAILPLRGKI+N+E+ DE +Y N EIQ+LI ALGLGV+G D LRYHKII
Sbjct: 478 ARDRRFQAILPLRGKIINIEKNDEKKIYNNTEIQSLISALGLGVRGNDEDLSNLRYHKII 537
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE------RGKQVQYCYD 533
I+TDADVDGAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+E K QYCY
Sbjct: 538 IMTDADVDGAHIRTLLLTFFYRYQKELIDKGFVYIACPPLYKIENKKNKNLDKNTQYCYS 597
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ EL+ + S N +IQRFKGLGEMMP QLW+TT++PE R+LK++ + DA A+ +F
Sbjct: 598 EGELEYIIQSSHFNK--NIQRFKGLGEMMPEQLWKTTMSPEMRILKKIKLSDAKRADKIF 655
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
LMG++V RK+ IQ A+L+ +D LDI
Sbjct: 656 EVLMGSKVPERKKFIQIQASLIKIDSLDI 684
>gi|158319065|ref|YP_001511572.1| DNA gyrase subunit B [Alkaliphilus oremlandii OhILAs]
gi|158139264|gb|ABW17576.1| DNA gyrase, B subunit [Alkaliphilus oremlandii OhILAs]
Length = 636
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 429/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TGPRGLHHLVYE++DN++DEA GY I V + D+S+ V DNGRGIP+D+HP
Sbjct: 29 MYIGTTGPRGLHHLVYEVVDNSIDEALGGYCDTILVTIKEDDSIEVIDNGRGIPVDVHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFGG S LHGVG+SVVNALSE LE T+ DG Y Q
Sbjct: 89 TGKSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEYLEATIKLDGKVYWQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV + + +GT I F PD ++F + F + T+ R+RELAFLN
Sbjct: 147 RFERGNPVEDIKI----IGETKEKGTTILFKPDAEIFEETV-FQYETLEYRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L D K Q +++ GG+ EYV++LN +K LH+ ++ F K+ + +++A
Sbjct: 202 GIKIVLI--DKREGKEQEKVFYYDGGIMEYVKYLNKNKSVLHEKIIHFEKEKETSVVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + YAN+I T +GGTH+ G +ASLTR +N KK+ +K+KD + GE
Sbjct: 260 MQY-TDTYTENIFSYANNINTHEGGTHLSGFRASLTRIVNDYAKKAGFLKEKDANFLGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV++ P+FEGQTKT+LGN E+R +V+ SV E L +LE +P I+ K
Sbjct: 319 IREGLTAVISVKLTEPQFEGQTKTKLGNSEMRGIVENSVSEALEAFLEENPSDAKIIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A AAK+AR+L R+K L S +LPGKLADCS P SEI+IVEG+SAGGSAKQ
Sbjct: 379 SLRAQRAREAAKKARELTRRKGALESMALPGKLADCSEKDPALSEIYIVEGNSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ M ++EI+N+I A G + GE+F E LRYHKI+
Sbjct: 439 GRDRSIQAILPLRGKILNVEKARLDKMLNSDEIRNMITAFGTSI-GEEFDIEKLRYHKIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ K L + G IY+ PPLYK+++GK +Y Y + E++
Sbjct: 498 IMTDADVDGAHIRTLLLTFLFRFMKPLIERGYIYIAQPPLYKLKKGKVEEYAYSEEEMQV 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
S N IQR+KGLGEM P QLWETT+NPE R Q+ IEDAA A+ +F++LMG
Sbjct: 558 KLSEMGGNV--DIQRYKGLGEMNPEQLWETTMNPETRTFLQVTIEDAAAADNIFTTLMGD 615
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+E I QN+ + NLD
Sbjct: 616 KVEPRREFIEQNSKYVTNLD 635
>gi|393809339|gb|AFN25843.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/619 (52%), Positives = 429/619 (69%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|402814456|ref|ZP_10864050.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
gi|402508303|gb|EJW18824.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
Length = 636
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 428/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY + IEV + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTSAKGLHHLVWEVVDNSIDEALAGYCTKIEVTVHEDNSITVVDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALS SL VTV RDG + Q
Sbjct: 88 MKRPAVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTSLVVTVKRDGHIHQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + + GT IRF PD +VFT ++D++T+ RIRELAFLN
Sbjct: 146 EYRRGVPQADLEI----IGDTEETGTTIRFQPDPEVFTETTEYDYDTLLSRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ + L +D Q + + GG++E+V++LN +++ +H+ + D IT ++A
Sbjct: 202 GIQMVL----TDERTGQSETFKYDGGIKEFVEYLNRNREKMHEQPIYVEGSKDYITCEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K +KD + +LSG+
Sbjct: 258 LQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRIINDYARKMNLMKDNNSNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E E+L +P V I+ K
Sbjct: 317 VREGLTAIISVKIPEPQFEGQTKTKLGNSEVRSIVESVFSEKFMEFLNENPMVSKKIVEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AA+RAR+L R+KS L SSLPGKLADCSS E+FIVEGDSAGGSAKQ
Sbjct: 377 GMQASRAREAARRARELTRRKSALEVSSLPGKLADCSSKDAAHCELFIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ + N EI+ +I ALG G+ GEDF E RYHKI+
Sbjct: 437 GRDRHFQAILPLKGKILNVEKSRLDKILSNAEIRAIITALGTGI-GEDFDLEKARYHKIV 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ER K V+Y D + +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLYKIERNKIVRYADSDKQKDE 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F A ++QR+KGLGEM QLWETT++PE R + Q+ +DA A+ VF +LMG
Sbjct: 556 IIAEFGEGAKVNVQRYKGLGEMNAEQLWETTMDPESRKMLQVSFDDAKMADDVFDTLMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 616 NVEPRRDFIQRHAKFVKNLD 635
>gi|392956558|ref|ZP_10322085.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
gi|391877540|gb|EIT86133.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
Length = 640
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 431/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EI+DN++DEA AGY I V + DNS++V DNGRGIP+ +H
Sbjct: 31 MYIGATNVKGLHHLVWEIVDNSIDEALAGYCDEITVTVEKDNSITVTDNGRGIPVGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS ++VTV+RDG +HQ
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSEMDVTVYRDGHIHHQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV+ L + +GT+I F PD ++FT ++D T++ RIRELA+LN
Sbjct: 149 KYHRGVPVSDLEV----IGETTERGTKIHFVPDTEIFTETTEYDFATLSQRIRELAYLNR 204
Query: 181 KLTI-ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
+ I A+ + + +P K E+ + GG++ YV+ +N ++ LH+ + + +GI++++A
Sbjct: 205 GIKICAVDQREENPTKQ---EFHYEGGIKSYVEHINRSREVLHEPIFIEGEKEGISLEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K +LTR +N G+K+ K D +L+G+
Sbjct: 262 LQY-NDSYTSNIYSFANNISTHEGGTHESGFKTALTRVINDYGRKNNYFKGSDTNLTGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + + E+ + ++ +PDV +L K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITESLFSEHFSSFMLENPDVAKRVLEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ AL+A +AAK+AR+ R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 381 GMMALRARVAAKKAREFTRRKSALEVSSLPGKLADCSSKDASVSELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ GEDF RYHK+I
Sbjct: 441 GRDRHFQAILPLRGKIINVEKARLDKILSNNEIRAIITALGTGI-GEDFDISKARYHKVI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+++Y YDD E+ +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRPIIEHGYVYIAQPPLYKVQQGKRIEYAYDDKEMDR 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P +QR+KGLGEM P QLWETT++P+ R L Q+ ++DA +A+ F LMG
Sbjct: 560 IMKELPQQPKPGVQRYKGLGEMNPTQLWETTMDPQTRTLLQVELKDAMDADETFEILMGD 619
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ IQ A V NLD
Sbjct: 620 KVEPRRDFIQEHAQYVENLD 639
>gi|228474176|ref|ZP_04058913.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
gi|228271871|gb|EEK13208.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
Length = 640
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/619 (52%), Positives = 429/619 (69%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EVGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 204 GISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 263 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 322 TREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 382 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 442 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 561 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|21228521|ref|NP_634443.1| DNA gyrase subunit B [Methanosarcina mazei Go1]
gi|20907008|gb|AAM32115.1| DNA gyrase, subunit B [Methanosarcina mazei Go1]
Length = 634
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/620 (53%), Positives = 432/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ S I+V + + SV+V DNGRGIPID HP
Sbjct: 27 MYIGSTDGRGLHHLVYEVVDNSIDEALAGFCSEIDVTINPNGSVTVIDNGRGIPIDPHPV 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE EV V RDG +Y Q
Sbjct: 87 HKKSALEVVMTILHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWTEVEVSRDGKKYFQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP V + + D GT+ F PD ++F T F ++ + R+RELAFLN
Sbjct: 145 RYIRGKP----ESDVREIGTSDTTGTKTTFKPDTKIFETT-DFQYDILLNRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A
Sbjct: 200 GLIINL-KDLRSPE-GQAETFNYSGGIIEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ ++ Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+
Sbjct: 258 MQY-TNGYTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DEKLTGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ P+FEGQTKT+LGN EV+ +VD V + L EY E +P V + IL K
Sbjct: 316 VREGLTAIISVKLMEPQFEGQTKTKLGNSEVKGIVDSLVTDGLAEYFEENPKVANIILDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KS L S+LPGKLADCS+ P E EI+IVEGDSAGGSAKQ
Sbjct: 376 ALLAQRAREAAKKARELTRRKSALEVSTLPGKLADCSNKNPAECEIYIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ A + KN E+ +LI A+G GV EDF E RYHKII
Sbjct: 436 GRDRSFQAILPLRGKILNVEKSRLAKILKNNEVISLITAIGTGV-SEDFDLENARYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT F+RY + L D G +Y+ PPLYK+++GK Y Y D EL
Sbjct: 495 IMTDADVDGAHIRTLLLTLFFRYMRHLIDAGYVYIAQPPLYKIKKGKMDYYAYSDKELAD 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +IQR+KGLGEM P QLWETT++PE R L Q+ +EDA A+ +F LMG
Sbjct: 555 KLKELGEKGV-AIQRYKGLGEMNPGQLWETTMDPESRTLLQVTLEDAIRADEIFRVLMGD 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ I+ +A +V+LD
Sbjct: 614 EVEPRRNFIETHAKEVVDLD 633
>gi|452974104|gb|EME73926.1| DNA gyrase subunit B [Bacillus sonorensis L12]
Length = 637
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 434/620 (70%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I V + DNS++V DNGRGIP+ +
Sbjct: 27 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEINVEIEKDNSITVRDNGRGIPVGIQEK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV+RDG ++Q
Sbjct: 87 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVYRDGKVHYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + D GT F PD ++FT ++D++T+A R+RELAFL
Sbjct: 145 EYERGVPKADLKV----IGDTDVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAFLTK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED K + NEY + GG++ YV+ LN ++ +H+ V DGIT+++A
Sbjct: 201 GVKITI--EDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIEGSKDGITVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K LTR +N +++ K+ D +LSGE
Sbjct: 259 LQY-NDSYTSNIYSFANNIHTYEGGTHEAGFKTGLTRVINDYARRNGVFKENDPNLSGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K
Sbjct: 318 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARAITDALFSEALEKFLLENPDSAKKIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 378 GVMAARARMAAKKARELTRRKSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 438 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYK+++GK+V+Y Y+D +L++
Sbjct: 497 IMTDADVDGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKIQQGKRVEYAYNDKQLEE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P N +QR+KGLGEM QLWETT++P+ R L Q+ ++DA +A+ F LMG
Sbjct: 557 ILKELPQNPKPGLQRYKGLGEMNATQLWETTMDPDTRTLLQVTLKDAIDADETFEMLMGD 616
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 617 KVEPRRNFIEENARYVKNLD 636
>gi|288554611|ref|YP_003426546.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
gi|288545771|gb|ADC49654.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
Length = 646
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 426/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ I+V + DNS++V DNGRGIP+ +H
Sbjct: 37 MYIGSTSGRGLHHLVWEIVDNSIDEAMAGHCDTIQVTIEEDNSITVEDNGRGIPVGIHEK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+ Y+Q
Sbjct: 97 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVEVHRENQVYYQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + +++GT IRF PD ++FT +++++ +A R+RELAFLN
Sbjct: 155 EYHRGVPAADLAV----IGETEKRGTIIRFKPDPEIFTETTEYEYDILATRLRELAFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
LTI + + E+N+ + YF+ GG+ +V+ LN K+ LHD + + DG+ +++A
Sbjct: 211 GLTITITDKR---EENKSSTYFYEGGIASFVEHLNRSKEVLHDEPIHIEAEKDGLNVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + +AN+I T +GGTH G K LTR +N +K K+ D +L+GE
Sbjct: 268 VQY-NDGYVSNIYSFANNISTHEGGTHESGFKTGLTRVINDYARKHNLFKENDPNLTGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P+P+FEGQTKT+LGN E R V D E + ++ HP V I+ K
Sbjct: 327 VREGLTAIISVKIPDPQFEGQTKTKLGNSEARTVTDSLFSEAFSRFMIEHPQVGKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AAK+AR+L R+KS L SSLPGKLADCSS SEI+IVEGDSAGGSAKQ
Sbjct: 387 GLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSSKDATISEIYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF E RYHKII
Sbjct: 447 GRDRHFQAILPLRGKIINVEKARLDKILANNEIRAIITALGTGI-GDDFDIEKARYHKII 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFFYRY + L ++G IY+ PPLYKV +G+ +QY Y+D EL +
Sbjct: 506 IMTDADVDGAHIRTLILTFFYRYMRPLIEKGYIYIAQPPLYKVTQGRDLQYAYNDKELDQ 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S + IQR+KGLGEM P QLWETT++PE R + Q+ +EDA +A+ +F LMG
Sbjct: 566 IMSQYTERNKVGIQRYKGLGEMNPTQLWETTMDPEYRTVLQVTLEDAMKADEIFEILMGD 625
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 626 RVEPRRDFIHENAQYVKNLD 645
>gi|312897423|ref|ZP_07756847.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
gi|310621484|gb|EFQ05020.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
Length = 647
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/624 (52%), Positives = 443/624 (70%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+ +H
Sbjct: 39 MYIGSTSLKGLHHLVYEVVDNSIDEALAGYCTHIEVTIEEDNSITVVDNGRGIPVAMH-K 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVVNALSE E+ V RDG +
Sbjct: 98 IGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSEQTEIEVKRDGFLWKI 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG V +L V P++ + +GT++ F PD ++F + +D T+ R+RELAFLN
Sbjct: 156 SFARGLTVNSLE-KVRPLEEGEERGTKVWFKPDSEIFPDTV-YDFETLKIRLRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV----GFRKDVDGITI 236
LTI L +D ++ Y++ GGL +VQ+LN ++ P++ V G + DV +
Sbjct: 214 GLTITL----ADKRTDKKEIYYYEGGLTSFVQFLNENRTPVNQTVISLEGIKSDV---VV 266
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
D+ALQ+ +D YS+ +L + N+I T +GGTH+ G ++ LTRT+N G+ S +K+ + +LS
Sbjct: 267 DIALQY-NDGYSENILTFVNNIFTEEGGTHLSGFRSGLTRTINDYGRSSGIIKENEDNLS 325
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT IISV+V P+FEGQTKT+LGN EV+ +VD + + L E+ E HP SI
Sbjct: 326 GEDVREGLTAIISVKVREPQFEGQTKTKLGNSEVKGIVDNIISDGLKEFFEEHPAEAKSI 385
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K+++A +A AA++AR+L R+K+ L SSLPGKLADCS P+ +EI++VEGDSAGGS
Sbjct: 386 VTKNINAARARQAARKARELTRRKNALEISSLPGKLADCSEKNPDMTEIYLVEGDSAGGS 445
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE+ + NEEI+ +I A G G+ GE+F RY
Sbjct: 446 AKQGRDRKFQAILPLRGKIINVEKARLDKILANEEIRAMITAFGTGI-GEEFDITKRRYD 504
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYR+ K L EG +Y+ PPLY+V +G+ V Y Y D E
Sbjct: 505 KIIIMTDADVDGAHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQVRKGRSVWYLYTDDE 564
Query: 537 L-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L K+ NA+ +QR+KGLGEM P QLWETT++P+ R + ++ +EDA EA+ +FS
Sbjct: 565 LTNKLAEVGNENAV--VQRYKGLGEMNPEQLWETTMDPQFRTMLKVELEDAVEADRIFSV 622
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R++ IQ NA + NLD
Sbjct: 623 LMGDKVEPRRKFIQDNAKKVRNLD 646
>gi|78043837|ref|YP_361487.1| DNA gyrase subunit B [Carboxydothermus hydrogenoformans Z-2901]
gi|77995952|gb|ABB14851.1| DNA gyrase, B subunit [Carboxydothermus hydrogenoformans Z-2901]
Length = 635
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/620 (52%), Positives = 451/620 (72%), Gaps = 17/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG+ + IEV + D S++VADNGRGIP+D+HP
Sbjct: 30 MYIGSTNEKGLHHLVYEVVDNSIDEALAGFCNRIEVIIHKDGSITVADNGRGIPVDIHPE 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHAGGKFGG VSGGLHGVG+SVVNALSE LEV + RDG Y+Q
Sbjct: 90 VGKPAVEVVLTMLHAGGKFGGGGY--KVSGGLHGVGVSVVNALSEWLEVRIKRDGNLYYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+SRG+P+T L + GT I F PD ++F T ++F+++T+A R+ EL++LN
Sbjct: 148 KFSRGEPITELKI----IGKSKSTGTIITFKPDAEIFET-VEFNYDTLAKRLLELSYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
+ I L+ E + E E F +GG+++Y+++LN +K+PLH ++ F K+ D + +++A
Sbjct: 203 NVKIILKDERINKE-----EIFEHSGGIKDYLKYLNKNKEPLHKIIYFEKEKDEVVVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+C +++S+ +L + N+I T +GGTH G K +LTR +N KK +K+ ++SL GE
Sbjct: 258 LQYC-NSFSENILSFTNNINTTEGGTHEIGFKTALTRVINDYAKKYNLIKENNLSLQGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV+VP+P+FEGQTKT+L N EVR +VD V +YL+ YLE +P V ++
Sbjct: 317 IREGLTAIISVKVPDPQFEGQTKTKLVNTEVRSIVDSIVSDYLSTYLEENPAVGKKLIEN 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+K+ L S++LPGKLADCS P E+++VEGDSAGGSAKQ
Sbjct: 377 AIRAARAREAARKARELARRKTALESNTLPGKLADCSEKDPSLCELYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG GV +DF E RYH++I
Sbjct: 437 GRDRRFQAILPLRGKILNVEKSRLDKILANEEIRAMITALGTGVD-KDFDIEKARYHRLI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYKV++GK +Y Y D EL++
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYLRPLIENGYVYIAQPPLYKVKKGKLEKYLYSDDELER 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + ++ +EDAA+A+ +F+ LMG
Sbjct: 556 YLNEIGREGV-TIQRYKGLGEMDPEQLWETTMNPETRTILKVTLEDAAKADEIFTILMGD 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A LV NLD
Sbjct: 615 KVEPRREFIEKNAKLVRNLD 634
>gi|317120855|ref|YP_004100858.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
gi|315590835|gb|ADU50131.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
Length = 635
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/622 (51%), Positives = 430/622 (69%), Gaps = 22/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHL++E++DNAVDEA AG + I V L AD S SV DNG GIP+ +HP
Sbjct: 26 MYIGSTGPRGLHHLIWEVVDNAVDEALAGRCTAITVTLHADGSCSVRDNGGGIPVGIHPK 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E VLT+LHAGGKF G + Y VSGGLHGVG+SVVNALSE LEV V R+G + Q
Sbjct: 86 VGKPTVEVVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVVNALSEWLEVEVRREGRIHRQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP T L V D D GT +RF PD ++F +F ++ + GR+RE+A LN
Sbjct: 144 RYRRGKPDTDLEV-VGTTDPAD-TGTYVRFKPDPEIFEET-EFKYDVVVGRLREIALLNS 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L+ E + + N + F GGL +V LN K+PLH + + ++ + DG+ +++A
Sbjct: 201 GLYIELKDERT----GERNLFQFMGGLRSFVALLNRTKEPLHPEPISYKGERDGVEVEMA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQW + +Y +T+ +AN+I T +GGTH G K +LTR +N +K+ +K+ + +LSG+
Sbjct: 257 LQWTT-SYVETLYSFANTIHTHEGGTHEAGFKMALTRVVNDYARKANLIKNGEENLSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P P+FEGQTKT+LGN EVR VVD E L Y E +P V ++ K
Sbjct: 316 IREGLTAVLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTGEALATYFEENPQVARRVVEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A++A AA++AR+L R+KS L ++LPGKL DC+ P +E+FIVEGDSAGGSAKQ
Sbjct: 376 AITAMRAREAARKARELTRRKSALEVTALPGKLTDCTVRDPAMAELFIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQA+LPLRGKILNVE+ + ++EI+ LI A+G G+ GEDF + RYHKII
Sbjct: 436 GRDRRFQAVLPLRGKILNVEKARLDKILAHDEIRALITAIGTGI-GEDFDIQKARYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-- 537
++TDADVDGAHIRTLLLTFF+RY K L + G +Y+ PPLY V GK+ Y YDD +L
Sbjct: 495 LMTDADVDGAHIRTLLLTFFFRYMKPLIEAGYVYIAQPPLYLVRMGKEEHYFYDDDQLEA 554
Query: 538 --KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+++ P+ QRFKGLGEM QLWETT+NPE R L Q+ +EDA A+ +FS
Sbjct: 555 FFRQIGKRMPA------QRFKGLGEMNAEQLWETTMNPETRTLLQVTLEDAMAADQIFSI 608
Query: 596 LMGARVDTRKELIQNAANLVNL 617
LMG+RV+ R+E I+ A V
Sbjct: 609 LMGSRVEPRREFIEQHARKVRF 630
>gi|314935205|ref|ZP_07842558.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
gi|313656540|gb|EFS20279.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
Length = 644
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 324/619 (52%), Positives = 429/619 (69%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V S ++ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGSTEKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GISITLRDEREDKEQRE-DTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|402300224|ref|ZP_10819751.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
gi|401724614|gb|EJS97959.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
Length = 641
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 323/622 (51%), Positives = 423/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ I+V + DNS++V DNGRGIP+ +H
Sbjct: 32 MYIGSTSARGLHHLVWEIVDNSIDEAMAGFCDQIDVLIEEDNSITVIDNGRGIPVGIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV + RDG YHQ
Sbjct: 92 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTMLEVEIERDGNLYHQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G P L + + GT+ F PD ++F I +D++T+A R+RELAFLN
Sbjct: 150 KYHQGVPAADLAI----IGKSENSGTKTHFKPDPEIFQETIVYDYDTLALRLRELAFLNK 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
LTI + ++ED K Y++ GG+ +V+ LN K+ LHD + + DG+ ++
Sbjct: 206 GLTITITDKREDGKSAK-----YYYEGGIASFVKHLNRTKEVLHDEPIHIEGEKDGLNVE 260
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +D Y + +AN+I T +GGTH G K +LTR +N +K+ VK+ D +L+G
Sbjct: 261 VAVQY-NDGYVGNLYSFANNISTHEGGTHESGFKTALTRVINDYARKNSLVKENDPNLTG 319
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREGLT IISV++P+P+FEGQTKT+LGN E R + D E+ + +L +P V I+
Sbjct: 320 DDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSLFSEHFSRFLIENPQVARKIV 379
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K L A +A AAK+AR+L R+KS L S+LPGKLADC+S SEI+IVEGDSAGGSA
Sbjct: 380 EKGLMASRAREAAKKARELTRRKSALEVSALPGKLADCASKDASISEIYIVEGDSAGGSA 439
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPLRGKI+NVE+ + N EI+ +I A G GV G DF E RYHK
Sbjct: 440 KQGRDRHFQAILPLRGKIINVEKARLDKILANNEIRAMITAFGTGVGG-DFDIEKARYHK 498
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPLYKV GK++QY Y EL
Sbjct: 499 IIIMTDADVDGAHIRTLLLTFFYRYMKPLIEYGYVYIAQPPLYKVTHGKEIQYAYVQKEL 558
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ S+P A IQR+KGLGEM P QLWETT++PE R L Q+ +EDA +A+ +F LM
Sbjct: 559 DPILKSYPEGAKIGIQRYKGLGEMNPTQLWETTMDPEHRTLLQVTLEDAIKADEIFEILM 618
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G RV+ R++ IQ NA + NLD
Sbjct: 619 GDRVEPRRDFIQENAQYVENLD 640
>gi|297616219|ref|YP_003701378.1| DNA gyrase subunit beta [Syntrophothermus lipocalidus DSM 12680]
gi|297144056|gb|ADI00813.1| DNA gyrase, B subunit [Syntrophothermus lipocalidus DSM 12680]
Length = 636
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 437/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGY I+V +L D++V+V DNGRGIP+D+HP
Sbjct: 30 MYIGSTDSRGLHHLVFEIVDNSIDEAVAGYCDEIKVIILDDSTVTVTDNGRGIPVDMHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
ALE +LT LH+G KFGGS GY++SGGLHGVGLSVVNALS LEV V RDG YHQ
Sbjct: 90 MGIPALEVILTTLHSGAKFGGS--GYTISGGLHGVGLSVVNALSRWLEVEVARDGQLYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT L + GT+I F PD ++F I F I R+REL++LN
Sbjct: 148 RYERGKPVTPLAV----TGACQTTGTKITFSPDPEIFE-EICFSAEIIGQRLRELSYLNQ 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
I L D + EY+ GG+ ++V++L+ +++PL + + FR +G +++A
Sbjct: 203 GTRIVL----CDKRTGRDVEYYHTGGIRDFVKYLSKNREPLSPEPIYFRIGKEGTVVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + Y++T+L YAN+I T +GGTH G K LTR +N KK +K+ + +L GE
Sbjct: 259 IQYNT-GYTETLLSYANNIHTQEGGTHELGFKNGLTRVVNEYAKKQGMLKENEGNLLGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T +ISV V +P+FEGQTKT+LGN +R +V+ +V +++ + + +P + I+ K
Sbjct: 318 IREGMTAVISVLVQDPQFEGQTKTKLGNAFIRSLVEGAVSDFVGAFFDENPSLAKKIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A AA++AR+L R+K++L S+SLPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 378 AIAARRAREAARKARELTRRKNLLDSTSLPGKLADCSEKDPALSELYLVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + NEEI+ LI A+G G+ GEDF RYH++I
Sbjct: 438 GRDRNFQAILPLRGKILNVEKARLDKVLSNEEIRALITAIGTGI-GEDFDINKARYHRLI 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIR LLLTFFYRY + L + G +YV PPLY+++RGK+V Y Y+D EL++
Sbjct: 497 IMTDADVDGSHIRVLLLTFFYRYMRPLIEAGYVYVAQPPLYELKRGKEVHYIYNDRELQR 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
N Y ++R+KGLGEM P QLWETT+NPE R L Q+ IEDA A+V+FSSLMG
Sbjct: 557 FLEQ-QGNKKYGVKRYKGLGEMNPEQLWETTMNPENRTLLQVRIEDAIAADVIFSSLMGE 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E IQ A LV NLD
Sbjct: 616 KVEPRREFIQENARLVTNLD 635
>gi|435851213|ref|YP_007312799.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
gi|433661843|gb|AGB49269.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
Length = 634
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 431/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + I+V + +D S++V DNGRGIP+D +P
Sbjct: 27 MYIGSTDNRGLHHLVYEVVDNSIDEALAGFCNQIDVIINSDGSLTVQDNGRGIPVDTYPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+T+LHAGGKF SS Y VSGGLHGVG+SVVNALSE EV V RDG Y+Q
Sbjct: 87 YNKSALEVVMTILHAGGKFDKSS--YKVSGGLHGVGVSVVNALSEWTEVYVKRDGNLYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G P+ V + GT + F PDK + T + F +T+ R+REL+FLN
Sbjct: 145 RYEKGVPI----ADVQVFGKSEGTGTTVTFKPDKSILETTV-FIFDTLVTRLRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I + + E+ + +Y GG+ +V+ LN + LH DV+ F ++ +G +++A
Sbjct: 200 GLKITISDRRTSEEEKEVFQY--EGGIISFVEHLNQKRNVLHKDVIYFEREKEGTIVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++++ +AN+I T +GGTH+ G KA+LTR N KK+ K D LSGE
Sbjct: 258 MQY-TDSYNESVYSFANNINTHEGGTHLVGFKAALTRVANDYIKKNNLAKGDD-KLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT II+V++ P+FEGQTKT+LGN +V+ +V+ V E L E++E +P V ++IL K
Sbjct: 316 IREGLTAIINVKLTEPQFEGQTKTKLGNSDVKGIVESMVSEGLAEFMEENPKVANAILQK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+K+ L S+LPGKLADCS P + E+++VEGDSAGGSAKQ
Sbjct: 376 ALDAQRAREAAKKARELTRRKNALDISTLPGKLADCSEKDPSQCELYLVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILP RGKILNVE+ + + KN E+ +LI A+G G+ G+D+ RYH++I
Sbjct: 436 GRDRRFQAILPFRGKILNVEKARLSRILKNTEVLSLITAMGTGI-GDDYDISRARYHRVI 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LT F+RY + L DEG +Y+ PPLY++++G+ Y Y D EL
Sbjct: 495 IMTDADVDGAHIRTLILTLFFRYMRPLIDEGYVYIAQPPLYRIKKGQAEHYVYSDRELNA 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +IQR+KGLGEM P QLWETT+NPE R + Q+ +EDA A+ +FS LMG
Sbjct: 555 KLKELGDKGI-NIQRYKGLGEMNPGQLWETTMNPETRTILQVTLEDAVVADEMFSILMGD 613
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ RK I A LV NLD
Sbjct: 614 EVEPRKNFIMKNAKLVTNLD 633
>gi|15612569|ref|NP_240872.1| DNA gyrase subunit B [Bacillus halodurans C-125]
gi|4033396|sp|O50627.1|GYRB_BACHD RecName: Full=DNA gyrase subunit B
gi|2760177|dbj|BAA24187.1| B subunit of DNA gyrase [Bacillus sp.]
gi|5672652|dbj|BAA82690.1| gyrB [Bacillus halodurans]
gi|10172618|dbj|BAB03725.1| DNA gyrase subunit B [Bacillus halodurans C-125]
Length = 637
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 425/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ I V + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTSSRGLHHLVWEIVDNSIDEAMAGFCDEIGVVIEEDNSITVTDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTMLEVEVHREGKVHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG P L + + DR GT+I F PD +FT F+++T+A R+RELAFLN
Sbjct: 146 KFHRGVPAADLEV----IGTTDRTGTKIHFKPDGDIFTETTVFEYDTLASRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
L I + E+ + +E+ + GG+ +V+ LN ++ LH+ + + G+ +++A
Sbjct: 202 GLRIKITDMR---EEEKSDEFHYEGGIASFVEHLNRTRETLHETPIHIEGEKQGVYVEIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D ++ + +AN+I T +GGTH G K LTR +N +K K+ D +L+GE
Sbjct: 259 VQY-NDGFTSNIYSFANNINTHEGGTHESGFKTGLTRVINDYARKHNLFKESDPNLTGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P+P+FEGQTKT+LGN E R + D E+ + +L HP V ++ K
Sbjct: 318 VREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSLFTEHFSRFLIEHPQVARKLVDK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AAK+AR+L R+KS L SSLPGKLADCSS SEI+IVEGDSAGGSAKQ
Sbjct: 378 GLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSSRDASISEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ G+DF E RYHKII
Sbjct: 438 GRDRHFQAILPLRGKILNVEKARLDKILANNEIRAIITALGTGI-GDDFDIEKARYHKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFFYRY + L + G +Y+ PPLYKV++GK +QY Y DAEL++
Sbjct: 497 IMTDADVDGAHIRTLILTFFYRYMRPLIEHGYVYIAQPPLYKVQQGKDIQYAYGDAELQE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S P A IQR+KGLGEM P QLWETT++P QR + Q+ +EDA +A+ +F LMG
Sbjct: 557 ILSQLPDKAKPGIQRYKGLGEMNPSQLWETTMDPGQRTVLQVTLEDAMKADEIFEILMGD 616
Query: 600 RVDTRKELIQ-NAANLVNLD 618
RV+ R++ IQ NA + NLD
Sbjct: 617 RVEPRRDFIQENARYVKNLD 636
>gi|399889393|ref|ZP_10775270.1| DNA gyrase subunit B [Clostridium arbusti SL206]
Length = 636
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/624 (51%), Positives = 438/624 (70%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA G+ NI + + DNSVS+ D+GRG+P+ +H
Sbjct: 28 MYIGSTSLRGLHHLVYEIVDNSIDEALGGFCENISITIHEDNSVSIVDDGRGMPVGIHHK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NK +E ++TVLHAGGKFGGS GY VSGGLHGVG SVVNALSE+ EV V R+G + Q
Sbjct: 88 MNKPTVEVIMTVLHAGGKFGGS--GYKVSGGLHGVGASVVNALSETCEVIVKREGHIWRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG + + + GT+I F PD +F I+F ++T+A R+RELAFLN
Sbjct: 146 LYHRGNVASPFE----EIGDTEEHGTQINFKPDSDIFE-EIEFSYDTLAQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I E D E + + + GG++ +V +LN +K+P+ + G++ D +
Sbjct: 201 GIKINFIDERHDKE----DTFHYEGGIKSFVSYLNRNKEPVFPEPIYIEGYKDDY---AV 253
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y++ + +AN+I T++GGTH+ G K++LTR LN +K +K+ D +LS
Sbjct: 254 EIALQY-NDGYAENLFSFANNIDTVEGGTHLAGFKSALTRALNDYARKFNFIKENDKNLS 312
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ +REGLT +IS+++ NP+FEGQTKT+LGN EVR +VD + E ++ +LE +P V I
Sbjct: 313 GDDIREGLTAVISIKLSNPQFEGQTKTKLGNSEVRGIVDNILGEKVSAFLEENPQVGKLI 372
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ KSL A +A AAK+AR+L R+KSVL +++LPGKLADCSS P E EI+IVEGDSAGGS
Sbjct: 373 IDKSLLAARARDAAKKARELTRRKSVLETTALPGKLADCSSKDPAECEIYIVEGDSAGGS 432
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE++ + +E I+ +I A G G+ +DF E +RYH
Sbjct: 433 AKQGRDRKFQAILPLRGKIMNVEKQRIDKILNSEMIRAMITAFGAGIS-KDFNIEKIRYH 491
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYKV +GK+ YCY + E
Sbjct: 492 RIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLYKVSKGKKEIYCYLEDE 551
Query: 537 LKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L + SIQR+KGLGEM QLWETT++PE+R+L + +EDA A+ +F+
Sbjct: 552 LDNALEEIGGKDNNTSIQRYKGLGEMNAEQLWETTMDPERRILLKATVEDAMAADEIFTI 611
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+E I QNA N+VNLD
Sbjct: 612 LMGDKVEPRREFIQQNAKNVVNLD 635
>gi|296131558|ref|YP_003638805.1| DNA topoisomerase IV subunit B [Thermincola potens JR]
gi|296030136|gb|ADG80904.1| DNA topoisomerase IV, B subunit [Thermincola potens JR]
Length = 635
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/620 (52%), Positives = 433/620 (69%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEV + DNS++V DNGRGIP+D+HP
Sbjct: 29 MYIGSTSTRGLHHLVYEVVDNSIDEALAGFCDKIEVIIHHDNSITVIDNGRGIPVDIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHAGGKFGG GY VSGGLHGVG+SVVNALSE LEV V RD YHQ
Sbjct: 89 IGKPAVEVVLTILHAGGKFGGD--GYKVSGGLHGVGVSVVNALSEWLEVEVKRDNHIYHQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + + GT+I F PD ++F + F+ T++ R++EL+FLN
Sbjct: 147 RYERGLPVTELKI----IGDSNSTGTKITFKPDHEIFEDLV-FNFETLSQRLKELSFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
LTI L+ E EK +E GG+ ++V+ LN +K LH + + F + D + +++A
Sbjct: 202 GLTIILKDERDGNEKTFQHE----GGIIDFVKHLNKNKDVLHPEPIYFEGEKDDVMVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + + N+I T +GGTH G K +LTR +N +K +K+ + +L+GE
Sbjct: 258 LQY-NDGYTENIFSFVNNIHTHEGGTHEAGFKTALTRVVNDYARKYNLLKENENNLTGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV+V P+FEGQTKT+LGN EVR +VD V E + +LE HP I K
Sbjct: 317 IREGLTAIISVKVREPQFEGQTKTKLGNSEVRGIVDAVVVEGVGTFLEEHPPFAKRITEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A AA++AR+L R+K+ L S+SLPGKLADCS P E+++VEGDSAGGSAKQ
Sbjct: 377 AINAARAREAARKARELTRRKNALESTSLPGKLADCSLKDPAVCELYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I A+G G+ +DF RYHK+I
Sbjct: 437 GRDRRFQAILPLRGKILNVEKARLDKVLANEEIRAMITAMGTGIS-DDFDISKARYHKLI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYKV++ K Y Y D EL+K
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKVKKNKIDNYVYSDHELEK 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + S+QR+KGLGEM P QLWETT+NPE R + ++ +EDA A+ +F+ LMG
Sbjct: 556 LLNQIGREGV-SLQRYKGLGEMNPEQLWETTMNPETRTILRVNLEDAMIADEIFTILMGD 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E IQ A V NLD
Sbjct: 615 KVEPRREFIQTHAKEVRNLD 634
>gi|33469292|gb|AAQ19683.1| DNA gyrase subunit B [Staphylococcus haemolyticus]
Length = 644
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V S D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGSTDKTGTVIRFKADGEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + + Y + GG++ YV+ LN +K+P+H+ + + D + I++A
Sbjct: 208 GISITLRDEREDVEQRE-DTYHYEGGIKSYVELLNENKEPIHEEPIYIHQTKDDVEIEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 MQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRILNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ E+ +L HP+V ++ K
Sbjct: 326 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRLFAEHFERFLYEHPNVARIVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKKPEESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLAQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ LMG
Sbjct: 565 LKSELSPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAIEADHTCEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|397905911|ref|ZP_10506745.1| DNA gyrase subunit B [Caloramator australicus RC3]
gi|397161079|emb|CCJ34080.1| DNA gyrase subunit B [Caloramator australicus RC3]
Length = 631
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 436/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEI+DNA+DEA AG+ NI+V + DNS++V D+GRGIP+D+HP
Sbjct: 25 MYIGSTGPRGLHHLVYEIVDNAIDEALAGFCKNIDVFIHKDNSITVIDDGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSA+E V TVLHAG KFGG S LHGVG SVVNALS+ L V V RDG + Q
Sbjct: 85 LKKSAVEVVFTVLHAGSKFGGGGYKVSGG--LHGVGASVVNALSKWLIVEVKRDGKIFRQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKPV+ L + + GT++ F D ++F T +++++ ++ R+RELAFLN
Sbjct: 143 KYERGKPVSELEV----IGEAEETGTKVTFLADDEIFETT-EYEYDVLSQRLRELAFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D ++ Y + GG++E+V++LN +K+ LHD + F D +++A
Sbjct: 198 GIAINLIDERVDKKET----YHYEGGIKEFVKYLNRNKEVLHDEPIYFEASKDDTVVEIA 253
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T +GGTH+ G K +LT+ +N +K +K+ + +L GE
Sbjct: 254 LQY-NDGYNENIFSFANNISTTEGGTHVSGFKTALTKVINDYARKYGFLKENEKNLQGED 312
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T +ISV++ NPEFEGQTKT+LGN EVR +VD V + ++ +LE +P V I+ K
Sbjct: 313 TREGITAVISVKITNPEFEGQTKTKLGNTEVRGIVDAIVTDKVSAFLEENPSVAKVIVEK 372
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR+L R+K+VL ++SLPGKLADCS P+ EIF+VEGDSAGGSAK
Sbjct: 373 CLLASRAREAARKARELTRRKNVLENTSLPGKLADCSEKDPKLCEIFLVEGDSAGGSAKG 432
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE++ + +EI+N+I A G G+ G+DF E +RY KII
Sbjct: 433 GRDRRFQAILPLRGKIMNVEKQRLDKILAYQEIRNMITAFGAGI-GDDFDIEKIRYDKII 491
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ PPLYK+ +GK + Y Y D EL+
Sbjct: 492 IMTDADVDGAHIRTLLLTFFYRYMRPLIEEGHVYIAQPPLYKISKGKNIYYAYSDRELEA 551
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + IQR+KGLGEM QLWETT+NPE R L ++ IEDA EA+ VF+ LMG
Sbjct: 552 KLNEIGRDNV-EIQRYKGLGEMNAEQLWETTMNPETRTLLKVTIEDAVEADEVFTILMGD 610
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ NA + NLD
Sbjct: 611 KVEPRREFIQKNAKRVQNLD 630
>gi|339443689|ref|YP_004709693.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
gi|338903441|dbj|BAK43292.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
Length = 647
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 320/629 (50%), Positives = 422/629 (67%), Gaps = 16/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY I V + DNS++V DNGRGIPID HP
Sbjct: 28 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDQIGVWIHPDNSITVTDNGRGIPIDKHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E VLT+LHAGGKFGG GY VSGGLHGVG+SVVNALS +EV V RDG EY
Sbjct: 88 EKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSSRVEVFVKRDGSEYKI 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ GK LT + GT+ FWPD ++FT +D++T+A R RE+AFLN
Sbjct: 146 TFDHGKTKEKLT----KIGPAKGTGTKTTFWPDPEIFTETTVYDYDTLANRFREMAFLNK 201
Query: 181 KLTIALRKED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
L I L +D E E F +AGG+ ++V++LN K+ L+ + F + T+++
Sbjct: 202 GLKITLHDARVTDEEGKPRTEVFQYAGGIVDFVKFLNEGKETLNKPIYFEAENADGTVEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QW + +++++ +AN+I T +GGTH++G K ++TR++N + +K+KD +LSG+
Sbjct: 262 AMQWSTSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRSINEYARAKGILKEKDSNLSGD 321
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGL I+SV++ +P+FEGQTKT+LGN E+R +V +V + L+EYLE +P I+
Sbjct: 322 DTREGLAAIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAVTQGLSEYLEENPSPAKRIIG 381
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS PE SEIFIVEGDSAGGSAK
Sbjct: 382 KATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSKEPENSEIFIVEGDSAGGSAK 441
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDR+ QAILPLRGKILNVER ++ I +LI A+G + G+DF + RYH+I
Sbjct: 442 QARDRKTQAILPLRGKILNVERAGLHRSLSSDTISSLITAIGTNI-GDDFDADQARYHRI 500
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY----KVERGKQVQ-YCYD 533
II+TDADVDGAHIR LLLTFFYRY L + G IY+ PP++ K R +++ Y YD
Sbjct: 501 IIMTDADVDGAHIRCLLLTFFYRYMPELINRGYIYIAQPPIFGLKKKNSRSPKIERYIYD 560
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ L + + + +QR+KGLGEM P QLWETT+ P R L Q+ I+DAAEA V
Sbjct: 561 ENALSSTLAEYDDPNKFDVQRYKGLGEMDPDQLWETTMEPATRTLLQVNIDDAAEAERVV 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
S LMG V+ RKE IQ A V LDI
Sbjct: 621 SELMGDLVEPRKEFIQKHARDVRF--LDI 647
>gi|421858603|ref|ZP_16290868.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
gi|410831899|dbj|GAC41305.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
Length = 636
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 428/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY + I+V + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTSVRGLHHLVWEVVDNSIDEALAGYCTKIQVIVHEDNSITVIDNGRGIPVGIEQK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALSESL VTV RDG Y Q
Sbjct: 88 MQRPAIEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSESLIVTVKRDGHIYQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + D GT IRF PD + FT + +D+ T+ RIRELAFLN
Sbjct: 146 EYRRGVPQYDLKV----LGDTDETGTTIRFKPDAETFTDTLVYDYETLISRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ + L +D NQ + + GG+ E+V++LN +++ +H+ + D IT ++A
Sbjct: 202 GIEMVL----TDERTNQTEIFKYDGGIIEFVEYLNRNRERMHEPPIYVEGQKDYITCEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K +KD +LSG+
Sbjct: 258 LQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRIINEYSRKMNLMKDNVSNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P + ++ K
Sbjct: 317 VREGLTAIVSVKIPEPQFEGQTKTKLGNSEVRSIVESLFAERLMEFMDENPAISRKVVEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA+RAR+L R+KS L SSLPGKLADCSS + E+FIVEGDSAGGSAKQ
Sbjct: 377 GLQAARAREAARRARELTRRKSALEVSSLPGKLADCSSKDASQCELFIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ + N EI+ +I ALG G+ GEDF E RYHKII
Sbjct: 437 GRDRHFQAILPLKGKILNVEKSRLDKILSNAEIRAIITALGTGI-GEDFDLEKARYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPL+K+ER K V+Y + +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLFKIERNKVVRYADSEKMRDE 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F A ++QR+KGLGEM QLWETT++PE R + Q+ EDA A+ VF +LMG
Sbjct: 556 IIAEFGEGAKVNVQRYKGLGEMNAEQLWETTMDPESRSMLQVSFEDAKMADEVFDTLMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 616 NVEPRRDFIQRHAKFVKNLD 635
>gi|83588881|ref|YP_428890.1| DNA gyrase subunit B [Moorella thermoacetica ATCC 39073]
gi|83571795|gb|ABC18347.1| DNA gyrase, B subunit [Moorella thermoacetica ATCC 39073]
Length = 634
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 325/624 (52%), Positives = 434/624 (69%), Gaps = 24/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG RGLH LV+E++DN++DEA AG+ IEV + + S++VADNGRGIP+D+H
Sbjct: 28 MYIGNTGVRGLHQLVFELVDNSIDEALAGFCDRIEVTIHENGSLTVADNGRGIPVDIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A+E LT+LHAGGKFGG+ GY V+GGLHGVGLSVVNALSE LE+ V R+G YHQ
Sbjct: 88 TGLPAVEVALTILHAGGKFGGN--GYKVAGGLHGVGLSVVNALSEWLEIKVKRNGKIYHQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+ V+ L + GT + F+PD ++F + F I R++EL+FLN
Sbjct: 146 EYRRGQKVSELKV----IGKTKGTGTSVTFYPDGEIFEDLV-FQDEIIGRRLQELSFLNR 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGIT 235
+ I R E ++ E Y+ GGL ++V+ LN +K KPL+ F + D +
Sbjct: 201 GVKIVFRDERNESETT----YYHTGGLIDFVRHLNKNKTVLFNKPLY----FSGEKDDVQ 252
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++A+Q+ +D Y++ +L YAN+I T++GG+H G K +LTR +N ++ +KD + +L
Sbjct: 253 AEIAIQY-NDGYNELILSYANNIHTVEGGSHEIGFKTALTRVINDYARRFNLLKDAEANL 311
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SGE +REGLT +ISV+V P+FEGQTKT+LGN EVR +VD V E L+ YLE +P +
Sbjct: 312 SGEDIREGLTAVISVKVLEPQFEGQTKTKLGNTEVRGIVDSLVAENLSAYLEENPTIGRR 371
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K+L+A +A AA++AR+L R+K+ L +SLPGKLADC+ P +E+F+VEGDSAGG
Sbjct: 372 IVDKALNAFRAREAARKARELTRRKNALEITSLPGKLADCTHKDPAMAELFLVEGDSAGG 431
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G+DF RY
Sbjct: 432 SAKQGRDRRFQAILPLRGKILNVEKARLDKILNNEEIRTIITALGTGI-GDDFNINKARY 490
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HK I++ DADVDG+HIRTLLLTFFYRY + L EG IY+ PPLYKV RGK +Y Y+DA
Sbjct: 491 HKTILMADADVDGSHIRTLLLTFFYRYMRPLITEGYIYIAQPPLYKVYRGKVERYLYNDA 550
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL+K + IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ +F+
Sbjct: 551 ELEKFLKEHEGER-WEIQRYKGLGEMNPEQLWETTMNPESRTLLQVNLEDAMEADAIFNI 609
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+E IQ A+ V NLD
Sbjct: 610 LMGDRVEPRREFIQQHAHEVRNLD 633
>gi|125974861|ref|YP_001038771.1| DNA gyrase subunit B [Clostridium thermocellum ATCC 27405]
gi|256003883|ref|ZP_05428870.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281418684|ref|ZP_06249703.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|385777392|ref|YP_005686557.1| DNA gyrase subunit B [Clostridium thermocellum DSM 1313]
gi|419721172|ref|ZP_14248363.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
gi|419726568|ref|ZP_14253590.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|125715086|gb|ABN53578.1| DNA gyrase, B subunit [Clostridium thermocellum ATCC 27405]
gi|255992221|gb|EEU02316.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281407768|gb|EFB38027.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|316939072|gb|ADU73106.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 1313]
gi|380770165|gb|EIC04063.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|380782872|gb|EIC12479.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
Length = 641
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 425/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ + I+V + DNS++ DNGRGIP+ +HP
Sbjct: 31 MYIGSTSSRGLHHLVYEIMDNSIDEALAGFCNEIKVIIHKDNSITNIDNGRGIPVGIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V T+LHAGGKF G GY VSGGLHGVG SVVNALSE LEV V+RDG Y Q
Sbjct: 91 LGISTVEVVHTILHAGGKFDGQ--GYKVSGGLHGVGASVVNALSEFLEVEVFRDGHIYRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT + + + GT+ F PD ++F +FD + R+RELAFLN
Sbjct: 149 RYERGKPVTPVEI----IGDTNLTGTKTTFKPDPEIFEVT-EFDFEVLLTRLRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L I LR D PE+ + GG+ +V++++ +K PLH+ + F DG +++A+
Sbjct: 204 GLKIILR--DERPEEPVEKHLHYEGGIVSFVEYMDRNKDPLHEPIYFDGYKDGCYVEIAM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ D Y + + +AN+I T +GGTH+ G K ++T+ LN KK +K+ D +L GE V
Sbjct: 262 QYNKDVYVENIHSFANNISTAEGGTHLTGFKTAITKVLNDYAKKFNFLKENDKNLLGEDV 321
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT +ISV++P+P+FEGQTKT+LGN EVR V+ + E +LE +P V IL K
Sbjct: 322 REGLTAVISVKIPDPQFEGQTKTKLGNSEVRSFVESIINEKFASFLEENPSVTRLILDKC 381
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ + +A AA++AR+L R+K+VL +S+LPGKLADC+ P EIFIVEGDSAGGSAKQG
Sbjct: 382 IMSARAREAARKARELTRRKNVLETSTLPGKLADCTERDPSLCEIFIVEGDSAGGSAKQG 441
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
R+RRFQAILPL GK+LNVE+ +Y N+++ +I ALG + G+DF LRYHKIII
Sbjct: 442 RNRRFQAILPLWGKMLNVEKARVDKVYGNDKLTPVIMALGTNI-GQDFDITKLRYHKIII 500
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK- 539
+ DADVDGAHIRTLLLTFFYRY L G +Y+ PPLYK+ +GK Y Y+D+EL+K
Sbjct: 501 MADADVDGAHIRTLLLTFFYRYMTPLITNGYVYIAQPPLYKITKGKTELYAYNDSELEKI 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ + +IQRFKGLGEM P QLW TT++PE R + ++ +EDA A+ +F+ LMG
Sbjct: 561 IRENQWKKEECTIQRFKGLGEMNPEQLWTTTMDPETRTILRVELEDAIAADEIFTILMGD 620
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ RKE IQ A LV NLD
Sbjct: 621 KVEPRKEFIQANAKLVTNLD 640
>gi|154684524|ref|YP_001419685.1| DNA gyrase subunit B [Bacillus amyloliquefaciens FZB42]
gi|154350375|gb|ABS72454.1| GyrB [Bacillus amyloliquefaciens FZB42]
Length = 638
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/620 (50%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F I +D++ ++ R+RELAFL
Sbjct: 146 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETIVYDYDLLSNRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|385267030|ref|ZP_10045117.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
gi|385151526|gb|EIF15463.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
Length = 640
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 30 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F ++D++ ++ R+RELAFL
Sbjct: 148 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTEYDYDLLSNRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 204 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 262 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 620 KVEPRRNFIEANARYVKNLD 639
>gi|338731010|ref|YP_004660402.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
gi|335365361|gb|AEH51306.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
Length = 630
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/623 (51%), Positives = 426/623 (68%), Gaps = 17/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN+VDEA AG+ I+V+L D SV V DNGRGIP+D HP
Sbjct: 24 MYIGSTGKSGLHHLVYEIIDNSVDEALAGFCDTIKVSLHEDGSVEVEDNGRGIPVDPHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KSALE V+T LHAGGKF S Y VSGGLHGVG SVVNALSE +EV V RDG+ Y+Q
Sbjct: 84 TGKSALEVVMTTLHAGGKF--SKDAYKVSGGLHGVGASVVNALSEKMEVWVHRDGLIYYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRGKP+ C V V +++GT +RF PD ++F+T ++FD + I ++RELA+LN
Sbjct: 142 AYSRGKPL----CEVTVVGKTNKRGTIVRFKPDPEIFST-VEFDPDIIQTKLRELAYLNV 196
Query: 181 KLTIALRKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
L I + + N Y E Y + GG+ EYV++L ++K LH+V+ + + + +D+A
Sbjct: 197 GLKIIF-----EDKINGYTEVYQYKGGISEYVRYLAGNRKMLHEVIRISGEWEDVKVDVA 251
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + D + YAN+IRT+D GTH+ K ++T+ N K +K KD S GE
Sbjct: 252 MVYTDSQEQDLIYSYANTIRTVDHGTHVTAFKNAITKLFNEYAKSLGILK-KDESFQGED 310
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGL ++SV + NPEFEGQTK +LG+ V + V+E LTEY E++ L IL +
Sbjct: 311 VREGLIAVVSVLLKNPEFEGQTKAKLGSEIAGVAVSKVVREKLTEYFEINKATLKIILER 370
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A++A AAK+ARDLVR+K+ L +S+LPGKLADC ST E+SE+FIVEGDSAGGSAKQ
Sbjct: 371 IAQAMRAREAAKKARDLVRRKNALENSALPGKLADCVSTDLEKSELFIVEGDSAGGSAKQ 430
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQA+LP+RGKILNVE+ + NE+I+++I A+G G+ G+ F + LRY KII
Sbjct: 431 ARDREFQAVLPIRGKILNVEKSSIHKLLNNEQIKDIIVAIGTGI-GDKFDRSRLRYGKII 489
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DGAHIRTLLLTFF+RY + L +EG +++ VPPLYKV ++ Y Y + E +K
Sbjct: 490 IMTDADIDGAHIRTLLLTFFFRYMRPLIEEGRVFIAVPPLYKVSVNGKIYYLYSEEEYEK 549
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
KS +QR+KGLGEM P QLWETT+NP+ R + ++ IEDA EA+ +F+ LMG
Sbjct: 550 FKSQLKEGTKIEVQRYKGLGEMNPEQLWETTMNPQTRKMIKVTIEDAEEADTLFNILMGE 609
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
R+ I+ A + + +LD+
Sbjct: 610 NTAERRSFIERHA--LKVTYLDV 630
>gi|397780370|ref|YP_006544843.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
gi|396938872|emb|CCJ36127.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
Length = 656
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 324/641 (50%), Positives = 439/641 (68%), Gaps = 33/641 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AG+ I V + D S+++ DNGRGIP+D+ P
Sbjct: 25 MYIGSTEARGLHHLVYEVVDNSVDEALAGFCDLILVTINRDGSITIEDNGRGIPVDIMPQ 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF ++ Y VSGGLHGVG+SVVNAL+ L+ TV+RDG Y
Sbjct: 85 YGKSALEIVLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALASWLDATVFRDGNVYEM 142
Query: 121 KYSRG---KPVTTL--TCHVL--------------PVDSKDRQGTRIRFWPDKQVFTTAI 161
++ +G KP+ + T H + P+D + QGTRI F PD+ +F T +
Sbjct: 143 QFRQGLVVKPLASRPETDHEMKIRYEERYGTRPAQPLDYERLQGTRITFQPDRSIFET-V 201
Query: 162 QFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL 221
FD++ + R+RELA+LN LTI+LR E + Y F GG+ E+V + K+PL
Sbjct: 202 NFDYDMLDHRLRELAYLNSGLTISLRDERTGDAIT----YCFEGGIREFVAHIGEGKEPL 257
Query: 222 HDVVGFRKDVDG---ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 278
HD V + + D + +++ALQ+ +++Y +T+ Y NS+ T +GGTH+EG ++++TR +
Sbjct: 258 HDEVIYFQKSDPESLVEVEVALQY-NNSYGETVYTYVNSVNTREGGTHLEGFRSAITRAI 316
Query: 279 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 338
N+ +++ K D + GE VREGL +IS RV P+FEGQTK RLGN VR +VD V
Sbjct: 317 NNSARRNNLFKSNDAQVKGEDVREGLASVISTRVAEPQFEGQTKMRLGNSNVRGIVDSLV 376
Query: 339 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 398
LTEY E HP L +I+ K+++A +A AA+ AR+L R+KS L ++ LPGKLADC
Sbjct: 377 YSSLTEYFEEHPKTLQAIVDKAMAAARAREAARNARELARRKSTLETTGLPGKLADCQER 436
Query: 399 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 458
P +SE++IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ E + KN EIQ LI A
Sbjct: 437 DPAKSELYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKASEHRILKNAEIQALISA 496
Query: 459 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 518
+G GV G+ F E RYH++I++TDADVDGAHIRTLLLTFFYRY L + G IY+ PP
Sbjct: 497 IGTGV-GDSFDVERARYHRVILMTDADVDGAHIRTLLLTFFYRYMMELVENGYIYIAQPP 555
Query: 519 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 578
LY++ RGKQ +Y Y + +++++ + F + +IQR+KGLGEM QLW TT++PE R+L
Sbjct: 556 LYRIFRGKQEKYAYREEDMREIIAEFGEKGV-TIQRYKGLGEMNAEQLWSTTMDPENRVL 614
Query: 579 KQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 618
KQ+ IEDA AN +F LMG VD R++ I ++A ++NLD
Sbjct: 615 KQVRIEDAVYANEIFEKLMGENVDARRDFIRRHAKEVINLD 655
>gi|282855958|ref|ZP_06265249.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
gi|282586177|gb|EFB91454.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
Length = 632
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/621 (51%), Positives = 433/621 (69%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHH VYE++DN+VDEA G+ S I V L AD SVSV+DNGRGIP+D HP+
Sbjct: 25 MYIGDTTTRGLHHCVYEVVDNSVDEALGGFCSEITVTLHADQSVSVSDNGRGIPVDPHPS 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE VLTVLHAGGKF + Y +SGGLHGVG+SVVNALSE LEVTV+RDG E+H+
Sbjct: 85 NGRPALEVVLTVLHAGGKF--DNHNYKISGGLHGVGVSVVNALSEWLEVTVYRDGREWHE 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PV+ LT ++GT + F PD ++F + F T+ R RE+AFL P
Sbjct: 143 RFERGTPVSGLTGGT----PTAKRGTTVTFRPDAEIFDE-VAFSAETLGNRFREMAFLIP 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L D + + Y + GG+ E+V ++N K+ L + R + DG+ ++
Sbjct: 198 GLKFIF----VDEAEGKTWTYHYEGGVSEFVAYINKGKQTLTPRPIVIRGEKDGVAVEAG 253
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D Y + + +AN I TI+GGTH+ G++++LTR +N +++ +K+KD +LSG+
Sbjct: 254 FQY-TDEYIERLYSFANLINTIEGGTHVAGLRSALTRGINEGARRAGVLKEKDENLSGDD 312
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLTC++SV++ NP+FEGQTKT+LGN V+ +VD + + + + LE P V+ I+ K
Sbjct: 313 LREGLTCVLSVKLGNPQFEGQTKTKLGNGNVKGIVDSLLYDGILQALEEDPSVIKPIIEK 372
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+AR+LVR KS L SLPGKLADCSS T E E++IVEGDSAGGSAKQ
Sbjct: 373 AIKARQAREAAKKARELVR-KSALSGLSLPGKLADCSSRTAENCEVYIVEGDSAGGSAKQ 431
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKILNVE+ M ++EI+ +I+ALG G+ GEDF LRY+KII
Sbjct: 432 GRDRKFQAILPLRGKILNVEKARMDKMLGSKEIRVIIQALGCGI-GEDFDIGKLRYNKII 490
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTFF+R+ + L ++G +Y VPPLY+V+ GK+V Y Y D EL+K
Sbjct: 491 IMTDADVDGAHISTLLLTFFFRHMRELIEKGHVYQAVPPLYRVQVGKKVDYLYSDKELRK 550
Query: 540 VKSSFPSNA-LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ ++QR+KGLGEM P QLWETT++P R+LKQ+ ++D A A+ F LMG
Sbjct: 551 FMDGLAADGKKAAVQRYKGLGEMNPGQLWETTMDPATRLLKQIELDDLAGADEYFDILMG 610
Query: 599 ARVDTRKELI-QNAANLVNLD 618
RV+ R++ I Q+A + NLD
Sbjct: 611 DRVEPRRQFIEQHAHEVHNLD 631
>gi|394994154|ref|ZP_10386883.1| DNA gyrase subunit B [Bacillus sp. 916]
gi|393805003|gb|EJD66393.1| DNA gyrase subunit B [Bacillus sp. 916]
Length = 638
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F ++D++ ++ R+RELAFL
Sbjct: 146 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTEYDYDLLSNRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|435853738|ref|YP_007315057.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433670149|gb|AGB40964.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 636
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 311/621 (50%), Positives = 429/621 (69%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHL++E++DN++DE AGY IE+ L +D V V D GRGIP+D+HP
Sbjct: 27 MYIGSTGTKGLHHLIWEVVDNSIDEFLAGYGDKIEITLQSDQVVKVRDYGRGIPVDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A + VLT LHAGGKF GS GY VSGGLHGVG+SVVNALSE L++ ++R+G YHQ
Sbjct: 87 KGLPAAQLVLTTLHAGGKFDGS--GYKVSGGLHGVGVSVVNALSEWLKIKIYRNGAVYHQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PVT + + GT I F PD ++F T ++F +T+ R++E AFLN
Sbjct: 145 KYERGYPVTEFEKQ----GTTSKTGTEIAFKPDAEIFDT-LEFKFDTLKNRLQESAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L + L+ D EK++ +Y + GGLE +++ LN K PL D+V ++VD +++A
Sbjct: 200 NLNLILK--DRRKEKDKEVKYCYDGGLEAFIKHLNKSKTPLVDDIVYVEREVDDTYVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ + Y++ + +AN+I T DGG H+ G K ++T+ LN ++ + D L+G
Sbjct: 258 FQY-NKGYNERIYSFANNINTHDGGYHLTGFKTAITKALNKYAEEKNVLNKTDPKLTGRD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV++ +P+FEGQTKT+LGN E+R V V +YL YLE +P + ++++K
Sbjct: 317 LREGLTAVISVKLTDPQFEGQTKTKLGNSEIRTTVQHVVSDYLPSYLERNPKLAKAVINK 376
Query: 360 SLSALKAALAAKRARDLVRQ-KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
+L A++A A+K+AR+L R+ K L S+SLPGKLADCSS TPEE E+++VEGDSAGGSAK
Sbjct: 377 ALEAVRARKASKKARELARKRKGPLSSNSLPGKLADCSSRTPEECELYLVEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+R FQA+LPL+GKI+NVER + KN+EI +++ ALG G+ GE+F + LRYHKI
Sbjct: 437 QGRNRNFQAVLPLKGKIMNVERSRLNKILKNKEIASIVTALGAGI-GEEFNLDKLRYHKI 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHI TLLLT FYRY L + IY+ PPLY+V G+Q +Y Y D ELK
Sbjct: 496 IIMTDADVDGAHICTLLLTLFYRYMPQLIENSHIYIAQPPLYQVTYGRQKKYLYTDQELK 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N + SIQR+KGLGEM P QLW TT++PE R L+++ ++D A+ VF SLMG
Sbjct: 556 EYLKDKNRNRI-SIQRYKGLGEMNPGQLWTTTMDPEHRKLQKVEVDDEIIADDVFHSLMG 614
Query: 599 ARVDTRKELIQNAANLV-NLD 618
++ R+E I N A+L N+D
Sbjct: 615 SKASLRREFIMNNADLASNID 635
>gi|410723309|ref|ZP_11362553.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
gi|410603355|gb|EKQ57790.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
Length = 635
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 323/624 (51%), Positives = 437/624 (70%), Gaps = 23/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IEV + DNS+ V D+GRG+P+ +HP
Sbjct: 28 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCRKIEVNINEDNSIKVTDDGRGMPVGIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E ++T+LHAGGKFGG GY VSGGLHGVG SVVNALSE VTV RDG + Q
Sbjct: 88 MGKSTVEVIMTILHAGGKFGGE--GYKVSGGLHGVGASVVNALSEECTVTVKRDGHIWQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGK + LT + D GT F PD ++F I +D ++ R+RELAFLN
Sbjct: 146 KYSRGKVLNELT----QIGDSDETGTETYFKPDVEIFDETI-YDFEILSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L + D E+ + + GG++ +V +LN +K PLH+ + G + D +++
Sbjct: 201 GIYIKLIDKRYDKEE----VFHYEGGIKSFVSYLNRNKVPLHEEPIYIEGLK---DNVSV 253
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +
Sbjct: 254 EIALQY-NDGYTENIFTFANNIDTVEGGTHLIGFKTALTRVFNDYAKKFGHIKENDKNFT 312
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ +REGLT +ISV++ P+FEGQTKT+LGN EVR +VD V E + +LE +P++ I
Sbjct: 313 GDDIREGLTAVISVKIEEPQFEGQTKTKLGNSEVRGIVDSIVGENIGVFLEENPNIGKMI 372
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AA++AR+L R KSVL S+LPGKLADCSS P E EI+IVEGDSAGGS
Sbjct: 373 VDKALMAARARDAARKARELTR-KSVLERSTLPGKLADCSSKDPRECEIYIVEGDSAGGS 431
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR+R+FQAILPLRGKILNVE++ + + I++++ A G G+ G DF E +RY+
Sbjct: 432 AKQGRNRKFQAILPLRGKILNVEKQRLDRILNADTIRSMVTAFGAGI-GNDFDVEKIRYN 490
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L D+G +Y+ PPLYKV + K+ Y Y D+E
Sbjct: 491 RIIIMTDADVDGAHIRTLLLTFFYRYMRQLVDDGHVYIAQPPLYKVSKSKKDYYAYSDSE 550
Query: 537 LKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ V S + IQR+KGLGEM QLW+TT++PE+R+L ++ IEDA A+ +F+
Sbjct: 551 LENVLSELGGKDNSTDIQRYKGLGEMNASQLWDTTMDPEKRILLKVNIEDAMAADEIFTI 610
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ RKE I QNA N+VNLD
Sbjct: 611 LMGEKVEPRKEFITQNAKNVVNLD 634
>gi|410582430|ref|ZP_11319536.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
gi|410505250|gb|EKP94759.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
Length = 635
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 430/622 (69%), Gaps = 22/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHL++E++DNAVDEA AG + I V L AD S SV DNG GIP+ +HP
Sbjct: 26 MYIGSTGPRGLHHLIWEVVDNAVDEALAGRCTAITVTLHADGSCSVRDNGGGIPVGIHPK 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E VLT+LHAGGKF G + Y VSGGLHGVG+SVVNALSE LEV V R+G + Q
Sbjct: 86 VGKPTVEVVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVVNALSEWLEVEVRREGRIHRQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+P T L V+ + D GT +RF PD ++F +F ++ + GR+RE+A LN
Sbjct: 144 RYRRGQPETGL--EVVGTTAADDTGTYVRFKPDPEIFEET-EFKYDVVVGRLREIALLNS 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I LR E + + N + F GGL +V LN K+ LH + + ++ + DG+ +++A
Sbjct: 201 GLYIELRDERT----GERNLFQFMGGLRSFVALLNRTKEALHPEPISYKAERDGVEVEMA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQW + +Y +T+ +AN+I T +GGTH G K +LTR +N +K+ +K+ D +L+G+
Sbjct: 257 LQWTT-SYVETLYSFANTIHTHEGGTHEAGFKMALTRVVNDYARKANLLKNGDENLAGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P P+FEGQTKT+LGN EVR VVD E L Y E +P V ++ K
Sbjct: 316 IREGLTAVLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTGEALATYFEENPQVARRVVEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A++A AA++AR+L R+KS L ++LPGKL DC+ P +E+FIVEGDSAGGSAKQ
Sbjct: 376 AITAMRAREAARKARELTRRKSALEVTALPGKLTDCTVRDPAMAELFIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQA+LPLRGKILNVE+ + ++EI+ LI A+G G+ G++F RYHKII
Sbjct: 436 GRDRRFQAVLPLRGKILNVEKARLDKILAHDEIRALITAIGTGI-GDEFDIHRARYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-- 537
++TDADVDGAHIRTLLLTFF+RY + L + G +Y+ PPLY V +GK+ Y YDD +L
Sbjct: 495 LMTDADVDGAHIRTLLLTFFFRYMRPLIEAGYVYIAQPPLYLVRQGKEEHYFYDDDQLEA 554
Query: 538 --KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++V P+ QRFKGLGEM QLWETT+NPE R L Q+ +EDA A+ +FS
Sbjct: 555 FFRQVGKRMPA------QRFKGLGEMNAEQLWETTMNPETRTLLQVTLEDAMAADQIFSI 608
Query: 596 LMGARVDTRKELIQNAANLVNL 617
LMG+RV+ R+E I+ A V
Sbjct: 609 LMGSRVEPRREFIEQHARKVRF 630
>gi|365173766|ref|ZP_09361472.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
gi|363616789|gb|EHL68216.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
Length = 647
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 311/622 (50%), Positives = 435/622 (69%), Gaps = 19/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYE++DN++DE+ AG+ I+V + D SV+V DNGRGIP ++H
Sbjct: 40 MYIGDQSQRGLHHLVYEVVDNSIDESLAGFCDTIDVTINIDGSVTVVDNGRGIPTEMH-E 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ KSA E VLTVLHAGGKF S Y VSGGLHGVG+SVVNALS LE+T+WR+G EYHQ
Sbjct: 99 SGKSAAEVVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVVNALSVWLELTIWRNGKEYHQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+T L V + +GTR++F PD+++F+T +F + + R+RELAFLN
Sbjct: 157 RYERGIPMTGLEA----VGDTELRGTRVQFMPDEEIFSTT-EFQADILKQRLRELAFLNS 211
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD---VVGFRKDVDGITID 237
+TI ED PEK + Y + GG+ +V++LN K+ L ++ KD +D
Sbjct: 212 HITINF--EDLRPEKPEKKSYNYPGGISSFVEYLNKGKEVLFKGPMIISGEKD--QTQVD 267
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +D Y + + G+ N I TI+GGTH+ G ++++TR +N +K K +K+KD +LSG
Sbjct: 268 VAIQY-NDTYLERLYGFVNLINTIEGGTHVAGFRSAMTRAINDEARKLKILKEKDNNLSG 326
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ ++EGLT +ISV+V P+FEGQTKT+LGN +V+ +VD V E L L+ P++L I+
Sbjct: 327 DDLKEGLTAVISVKVMEPQFEGQTKTKLGNNDVKGIVDSIVYEGLKNALDERPEILKPIV 386
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+L A +A AAK+A++LVR+KS++ +LPGKL+DCS+ P + EI+IVEGDSAGGSA
Sbjct: 387 ESALRARQAREAAKKAKELVRRKSIMSGLTLPGKLSDCSNRNPADCEIYIVEGDSAGGSA 446
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+R FQAILPLRGKILNVE+ + +E I+N+I ALG GV G+DF E LRYHK
Sbjct: 447 KQGRNREFQAILPLRGKILNVEKARLEKILSSETIRNIILALGCGV-GDDFNDEKLRYHK 505
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I I+ DADVDGAHIRTLLLT F+RY + ++G +YV PPL++V+ GK V YC+ + E+
Sbjct: 506 IFIMADADVDGAHIRTLLLTLFFRYMPQIIEKGYLYVAQPPLFRVQCGKDVTYCFSEKEM 565
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+ ++ + +QR+KGLGEM QLWETT+NPE R++ ++ ++DA EA+ +F LM
Sbjct: 566 KEAQNKANGKKV-DVQRYKGLGEMNAEQLWETTMNPENRIINRVEVQDAVEADELFGILM 624
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G V+ R++ I+ V NLD
Sbjct: 625 GDVVEPRRKFIEQFGKEVKNLD 646
>gi|220930856|ref|YP_002507764.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219992166|gb|ACL68769.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 642
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/621 (52%), Positives = 440/621 (70%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYE++DN++DEA GY IEV + N ++V DNGRGIP+D HP
Sbjct: 33 MYIGSTGMDGLHHLVYEVVDNSIDEAMQGYCDLIEVIIKPGNIITVKDNGRGIPVDPHPK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYH 119
K A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS+ LEV V WRDG YH
Sbjct: 93 LKKPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSKWLEVEVCWRDGKVYH 150
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
QKY+RG PV L + GT I F PD+++F + F + +A R++ELAFLN
Sbjct: 151 QKYNRGIPVYDLKV----IGECSGTGTTISFKPDEEIFED-VNFKYKVLAQRLKELAFLN 205
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDL 238
+ I LR D E+ + +EY F GGL +V++LN +K PL D + ++ D +++
Sbjct: 206 KGVRIILR--DEREEEARQDEYCFEGGLVSFVKYLNKNKNPLFDEPFYLEEKDENREVEI 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D Y D++ +AN+I T +GGTH+ G K++LTRT+N + +K+ D +L+GE
Sbjct: 264 AIQY-NDGYVDSIFTFANNINTREGGTHLSGFKSALTRTVNDYARSKGILKENDENLTGE 322
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+T IISVR+ +P+FEGQTKT+LGN E+R VD ++ L +LE +P + I+
Sbjct: 323 DIREGITAIISVRLTDPQFEGQTKTKLGNSEIRGFVDSALSSNLRTFLEENPKIGKIIVE 382
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ SA +A AAK+AR+L R+K L +++LPGKLADCSS E +EI+IVEGDSAGGSAK
Sbjct: 383 KARSAARARKAAKKARELTRRKGALSNTALPGKLADCSSRDTENTEIYIVEGDSAGGSAK 442
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPLRGKILNVE+ + NEEI+ LI A+G G+ G++F RY KI
Sbjct: 443 QGRDRKFQAILPLRGKILNVEKARLNKILNNEEIRALITAIGTGI-GDEFDINKARYGKI 501
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYKV++G++ +Y Y+D L+
Sbjct: 502 IIMTDADVDGAHIRTLLLTFFYRYMRPLIENGMIYIAQPPLYKVKKGRREEYVYNDRGLQ 561
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + + + ++QR+KGLGEM P QLWETT+NPE R++ ++ IEDA A+ F++LMG
Sbjct: 562 KLLNDIGRDKI-TLQRYKGLGEMNPDQLWETTMNPENRIILKVKIEDAVVADETFTTLMG 620
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V R+E IQ A+ V NLD
Sbjct: 621 DKVQPRREFIQEHAHEVQNLD 641
>gi|332980610|ref|YP_004462051.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
gi|332698288|gb|AEE95229.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
Length = 633
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 321/623 (51%), Positives = 440/623 (70%), Gaps = 22/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DE AG+ I++ + DNS++V DNGRGIP+ +HP
Sbjct: 27 MYIGSTGPRGLHHLVYEVVDNSIDEVLAGFCDTIKIIIHKDNSITVEDNGRGIPVGIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SA+E LT+LHAG KFGG S LHGVG+SVVNALSE L VTV ++G Y Q
Sbjct: 87 TGRSAVEVALTMLHAGSKFGGGGYKVSGG--LHGVGVSVVNALSEWLIVTVKQNGHIYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT L + D GT I F PD QVF ++++++T+ R RELAFLN
Sbjct: 145 RYERGKPVTDLEV----IGDTDETGTTISFKPDYQVFE-ELEYNYDTLRNRFRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
++TI L E D ++ E+ + GG+ +V++LN +K PLH + G R DV +
Sbjct: 200 EVTITLIDERDDKKE----EFHYEGGIVSFVEYLNKNKSPLHKEAIYISGMRDDVQ---V 252
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ +D+Y +++ +AN+I T +GGTH+ G ++++T+ +N +K +K + SLS
Sbjct: 253 EVAIQY-NDSYVESVYAFANNIETPEGGTHLSGFRSAMTKVINDYARKLNMLKPNEPSLS 311
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++ +P+FEGQTK +LGN EVR +VD V + L+ Y E HP V I
Sbjct: 312 GDDVREGLTAIISVKLSDPQFEGQTKEKLGNSEVRGIVDSIVSDGLSTYFEEHPSVTKII 371
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++SA +A AA++AR+L R+KS L S S+PGKLADCS P+ EIF+VEGDSAGGS
Sbjct: 372 IEKAISAFRAREAARKARELTRRKSALESVSMPGKLADCSERDPKLCEIFLVEGDSAGGS 431
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I A G G+ GEDF LRY
Sbjct: 432 AKQGRDRRFQAILPLRGKILNVEKTRLDRILSNEEIKAMITAFGAGI-GEDFDISKLRYE 490
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+II +TDADVDG+HIRTLLLTFFYRY + L + G +Y+ PPLYKVE+GK+ Y Y D E
Sbjct: 491 RIICMTDADVDGSHIRTLLLTFFYRYMRPLLENGNVYIAQPPLYKVEKGKKEYYIYSDRE 550
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ + + + ++QR+KGLGEM PVQLW+TT++P +R + ++ IEDA A+ +F+ L
Sbjct: 551 LEQLLTRIGRDGI-TVQRYKGLGEMDPVQLWDTTMDPAKRTMLKVSIEDAIAADEIFTIL 609
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R+E I + A+LV NLD
Sbjct: 610 MGDNVEPRREFIASNAHLVKNLD 632
>gi|312109156|ref|YP_003987472.1| DNA gyrase subunit beta [Geobacillus sp. Y4.1MC1]
gi|336233551|ref|YP_004586167.1| DNA gyrase subunit B [Geobacillus thermoglucosidasius C56-YS93]
gi|423718277|ref|ZP_17692459.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
gi|311214257|gb|ADP72861.1| DNA gyrase, B subunit [Geobacillus sp. Y4.1MC1]
gi|335360406|gb|AEH46086.1| DNA gyrase, B subunit [Geobacillus thermoglucosidasius C56-YS93]
gi|383367207|gb|EID44490.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
Length = 640
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/623 (53%), Positives = 434/623 (69%), Gaps = 19/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AGY + I V + D S++V DNGRGIP+D+
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGYCTEINVTIEKDGSITVTDNGRGIPVDIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSEELEVYVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T L V DR GT + F PD ++FT +FD+ T+A R+RELAFLN
Sbjct: 149 KYQRGVPCTDLQV----VGETDRTGTTVHFKPDPEIFTETTEFDYETLATRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L ED E N+ NEY + GG++ YV+ LN ++ LH+ ++G R DGI +
Sbjct: 205 GLKITL--EDKRVE-NRKNEYCYEGGIQSYVKHLNRTREVLHEEPIYIIGER---DGIYV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A Q+ +D+YS + + N+I T +GGTH G K +LTR +N +K + KD D +L+
Sbjct: 259 EIAFQY-NDSYSSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKDNDPNLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ P P+FEGQTKT+LGN + R V D E +L +P + I
Sbjct: 318 GEDVREGLTAIVSIKHPAPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKI 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGS
Sbjct: 378 VEKGMMAARARLAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDITKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY + + G +Y+ PPLYK+E+ KQV+Y Y+D +
Sbjct: 497 KIIIMTDADVDGAHIRTLLLTFFYRYMREFIERGYVYIAQPPLYKIEQDKQVRYAYNDRQ 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+K+ + P N +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA EA+ F L
Sbjct: 557 LEKILAELPENPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIEADETFEIL 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENARYVKNLD 639
>gi|403236812|ref|ZP_10915398.1| DNA gyrase subunit B [Bacillus sp. 10403023]
Length = 640
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 427/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V + DNS++V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVIIEEDNSITVKDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++T+LHAGGKF G GY VSGGLHGVG SVVNALS SLEV V RDG ++
Sbjct: 91 MGRPAVEVIMTILHAGGKFDGG--GYKVSGGLHGVGASVVNALSTSLEVYVHRDGKIHYI 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG VT L V D GT F PD ++FT +++D +T+A R+RELAFL
Sbjct: 149 AFERGHVVTELKV----VGETDHTGTTTHFKPDGEIFTETLEYDFDTLATRLRELAFLTR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
+ I + + E+N+ EY + GG++ YV+ LN K+ +H+ F + +GI I++A
Sbjct: 205 GVKITI---EDKREENKRREYHYEGGIKSYVEHLNRTKEVIHEEPVFVEGEREGIAIEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K +LTR +N +++ KD D +LSG+
Sbjct: 262 LQY-NDSYTSNIYSFANNIHTYEGGTHESGFKTALTRIINDYARRNNIFKDNDANLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV+ P+P+FEGQTKT+LGN E R V + E +L +P V I+ K
Sbjct: 321 VREGLTAIISVKHPDPQFEGQTKTKLGNSEARTVTESVFSEKFEAFLLENPTVARKIVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GTMAARARMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDRILSNNEVRSMITALGTGI-GEDFDISKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + + + G +Y+ PPLYK+++GK+++Y Y+D EL+K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRFMRQIIESGFVYIAQPPLYKIQQGKRIEYAYNDRELEK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ PSN IQR+KGLGEM P QLWETT++P R + Q+ ++DA +A+ F LMG
Sbjct: 560 YLAELPSNPKPGIQRYKGLGEMNPEQLWETTMDPSNRTMLQVTLQDAIDADETFEMLMGD 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 620 KVEPRRNFIEENAQYVKNLD 639
>gi|308171897|ref|YP_003918602.1| DNA gyrase subunit B [Bacillus amyloliquefaciens DSM 7]
gi|384162410|ref|YP_005543789.1| DNA gyrase subunit B [Bacillus amyloliquefaciens LL3]
gi|384166630|ref|YP_005548008.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
gi|307604761|emb|CBI41132.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens DSM 7]
gi|328909965|gb|AEB61561.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens LL3]
gi|341825909|gb|AEK87160.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
Length = 640
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 30 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL
Sbjct: 148 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 204 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVIHEEPIYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 262 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 620 KVEPRRNFIEANARYVKNLD 639
>gi|402829788|ref|ZP_10878661.1| DNA gyrase, B subunit [Slackia sp. CM382]
gi|402283455|gb|EJU31969.1| DNA gyrase, B subunit [Slackia sp. CM382]
Length = 648
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 320/629 (50%), Positives = 426/629 (67%), Gaps = 16/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AG+ + I+V + DNSV+V D+GRGIP+D HP
Sbjct: 29 MYIGSTGPRGLHHLVYEVVDNSVDEALAGFCNKIDVTIHEDNSVTVVDDGRGIPVDKHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E VLT LHAGGKFGG GY VSGGLHGVG+S VNALS +EV V RDG Y
Sbjct: 89 EKIPTVEVVLTKLHAGGKFGGE--GYKVSGGLHGVGVSCVNALSTRMEVDVCRDGSRYRI 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG VTT + DSK + GT + FWPD ++FT +D++ + R RE+AFLN
Sbjct: 147 VFERG--VTTEKLKRIG-DSK-KTGTTVTFWPDPEIFTDTTVYDYSILQNRFREMAFLNR 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
L I + E D D E N + + F +AGG+ ++V++LN K+ L+ + F + T+++
Sbjct: 203 GLHIEMHDERDLDEEGNPHTDSFQYAGGIVDFVKYLNNGKETLNKPIYFEAENKDGTVEI 262
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+QW + ++ + +AN+I T +GGTH+EG K +LTRT+N + +K+KD +L+G+
Sbjct: 263 AMQWTTSYSANGVEAFANNINTTEGGTHLEGFKNALTRTINDYARAKGLLKEKDSNLTGD 322
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGL+ +ISV++ P+FEGQTKT+LGN E+R +V +V + L EYLE +P I++
Sbjct: 323 DAREGLSAVISVKLHEPQFEGQTKTKLGNTEIRGLVQGAVTKGLAEYLEENPTPAKRIVN 382
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS P EIFIVEGDSAGGSAK
Sbjct: 383 KASQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSRDPSACEIFIVEGDSAGGSAK 442
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDR++QAILPLRGKILNVER ++ I +LI A+G + GED+ E RYH+I
Sbjct: 443 QARDRKYQAILPLRGKILNVERAGLHRALSSDTISSLITAIGTNI-GEDYDGEKARYHRI 501
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-----GKQVQYCYD 533
II+TDADVDGAHIR LLLTFFYRY L + G +Y+ PPLY +++ GK ++Y Y+
Sbjct: 502 IIMTDADVDGAHIRCLLLTFFYRYMPDLINRGYVYIAQPPLYGLKKKNSASGKILKYIYN 561
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D ++ + + Y +QR+KGLGEM P QLWETT+ PE R L Q+ IEDA A +
Sbjct: 562 DEAKDELVAKLENPDKYEMQRYKGLGEMDPQQLWETTMEPETRTLLQVDIEDAVAAELAV 621
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
S LMG V+ RKE IQ A V LDI
Sbjct: 622 SELMGELVEPRKEFIQKHARDVRF--LDI 648
>gi|387928232|ref|ZP_10130910.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
gi|387587818|gb|EIJ80140.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
Length = 640
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/620 (52%), Positives = 430/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I V + DNS++V DNGRGIP+ +
Sbjct: 31 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTEINVTIEKDNSITVVDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT IRF PD ++FT ++FD+ T+A R+RELAFLN
Sbjct: 149 KYERGVPCEDLKL----IGETDRTGTTIRFKPDGEIFTETLEFDYETLANRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED E N+ NEY++ GG++ YV+ LN ++ LH+ + + DGIT+++A
Sbjct: 205 GIRITI--EDKRVE-NKRNEYYYEGGIKSYVEHLNRTREVLHEEPIYMEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D +S + +AN+I T +GGTH G K +LTR +N +K K+ D +LSGE
Sbjct: 262 LQY-NDGFSSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKHGIFKENDANLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ P+P+FEGQTKT+LGN EVR + D E +L +P V I+ K
Sbjct: 321 VREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAITDTIFAENFETFLLENPSVARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L +A LAAK+AR+L R+K+ L SSLPGKLADCSS P SE+++VEGDSAGGSAKQ
Sbjct: 381 GLMGARARLAAKKARELTRRKNALEVSSLPGKLADCSSKDPSISELYVVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHKI+
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITAVGTGI-GEDFDISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV+ GK+++Y Y+D +L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRKILEAGYVYIAQPPLYKVQHGKRIEYAYNDRQLEQ 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S PS IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 560 ILSELPSQPKPGIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLEDAIEADETFEILMGD 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA + NLD
Sbjct: 620 KVEPRRQFIEENAIYVKNLD 639
>gi|384157618|ref|YP_005539691.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
gi|328551706|gb|AEB22198.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
Length = 638
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL
Sbjct: 146 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVIHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|375360696|ref|YP_005128735.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371566690|emb|CCF03540.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 640
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 30 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL
Sbjct: 148 AYERGVPVADLEV----IGETDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 204 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 262 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 620 KVEPRRNFIEANARYVKNLD 639
>gi|387896530|ref|YP_006326826.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429503537|ref|YP_007184721.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|387170640|gb|AFJ60101.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429485127|gb|AFZ89051.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 638
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL
Sbjct: 146 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|89892751|ref|YP_516238.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219666076|ref|YP_002456511.1| DNA gyrase subunit beta [Desulfitobacterium hafniense DCB-2]
gi|423075892|ref|ZP_17064606.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
gi|89332199|dbj|BAE81794.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219536336|gb|ACL18075.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DCB-2]
gi|361853120|gb|EHL05306.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
Length = 644
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 434/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IEV + DNS+SV DNGRGIP+D+HP
Sbjct: 36 MYIGSTSLRGLHHLVYEIVDNSIDEALAGYCDTIEVTIHKDNSISVVDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKF GS+ Y VSGGLHGVG+SVVNALS L V V +DG YHQ
Sbjct: 96 LGKPAVEVALTVLHAGGKFSGSA--YKVSGGLHGVGMSVVNALSTWLHVEVRKDGNIYHQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK T L + VD ++ GT I F PD ++F + F +T+A R+REL+FLN
Sbjct: 154 EFMRGKTKTELAV-IGQVDP-NQTGTTITFSPDPEIFEDTV-FLFDTLAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
K++I L D +++ Y+ GG+ ++V+++N K+ LH + + F + DG+ ++++
Sbjct: 211 KVSITL----IDAREDKKEVYYHTGGIYDFVKYINRSKESLHPEPIYFEAEKDGVQVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + YAN+I T +GGTH G KA+LTR N +K+ +K + +LSGE
Sbjct: 267 MQY-NDGYVENLFSYANNIHTHEGGTHESGFKAALTRVANDYARKNNILKANEANLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP P+FEGQTKT+LGN E+R +VD E L+ + E +P + ++ K
Sbjct: 326 IREGLTAVISVKVPEPQFEGQTKTKLGNSEIRSIVDSITGEGLSAFFEENPAIGKKVIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+KS L S+LPGKLADCS E E++IVEGDSAGGSAKQ
Sbjct: 386 SIQASRAREAARKARELTRRKSALEVSALPGKLADCSWKEAELCEMYIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + N EI+ +I A+G G+ EDF E RYHK++
Sbjct: 446 GRDRRFQAILPLRGKILNVEKARLDRILGNAEIRAMITAMGTGI-SEDFDIEKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIR LLLTFF+RY K L + +Y+ PPL+KV++GK + Y Y + EL K
Sbjct: 505 IMTDADVDGAHIRILLLTFFFRYMKPLLENNYVYIAQPPLFKVKKGKDIHYVYSNEELAK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ + + IQR+KGLGEM QLWETT++P +R + Q+ +EDA +A+ +F+ LMG
Sbjct: 565 LQDEIGRDRV-EIQRYKGLGEMNAEQLWETTMDPAKRTILQVTMEDAIKADELFTILMGD 623
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R+E IQ+ A V NLD
Sbjct: 624 VVEPRREFIQDNAQYVRNLD 643
>gi|374605476|ref|ZP_09678403.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
gi|374388927|gb|EHQ60322.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
Length = 636
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 428/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY + I+V + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTSVRGLHHLVWEVVDNSIDEALAGYCTKIQVIVHEDNSITVIDNGRGIPVGIEQK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALSESL VTV RDG + Q
Sbjct: 88 MQRPAVEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSESLIVTVKRDGHIHQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + + GT IRF PD ++FT + +DH T+ RIRELAFLN
Sbjct: 146 EYRRGVPQYDLKV----LGDTEETGTTIRFKPDPEIFTDTLVYDHETLVSRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ + L E +D Q + + GG+ E+V++LN +++ +H+ + D IT ++A
Sbjct: 202 GIEMVLTDERND----QTETFKYDGGIIEFVEYLNRNREKMHEPPIYVEGQKDYITCEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K +KD +LSG+
Sbjct: 258 LQY-NDSYTENIYSFANNIHTHEGGTHESGFKSALTRIINEYARKMNLMKDNVSNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P + ++ K
Sbjct: 317 VREGLTAIVSVKIPEPQFEGQTKTKLGNSEVRSIVESLFAERLMEFMDENPAISRKVVEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA+RAR+L R+KS L SSLPGKLADCSS + E+FIVEGDSAGGSAKQ
Sbjct: 377 GLQAARARDAARRARELTRRKSALEVSSLPGKLADCSSKDASQCELFIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ + N EI+ +I ALG G+ GEDF + RYHKII
Sbjct: 437 GRDRHFQAILPLKGKILNVEKSRLDKILSNAEIRAIITALGTGI-GEDFDLDKARYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPL+K+ER K V+Y + +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRRLIEAGYVYIAQPPLFKIERNKVVRYADSEKMRDE 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F ++QR+KGLGEM QLWETT++PE R + Q+ EDA A+ VF +LMG
Sbjct: 556 IIAEFGEGVKVNVQRYKGLGEMNAEQLWETTMDPESRSMLQVSFEDAKMADEVFDTLMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ IQ A V NLD
Sbjct: 616 NVEPRRDFIQRHAKFVKNLD 635
>gi|289551838|ref|YP_003472742.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
gi|289181369|gb|ADC88614.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
Length = 640
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/619 (52%), Positives = 427/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVIIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVHRNETIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V D+ GT IRF D ++FT +D++T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EVGETDKTGTVIRFKADSEIFTETTVYDYDTLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I L+ E D E+ + + Y + GG++ YV+ +N +K+P+H+ + + D I I++A
Sbjct: 204 GISITLKDERDDEEQRE-DTYHYEGGIKSYVELMNENKEPIHEEPIYIHQMKDDIEIEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G KSK +K+ LSGE
Sbjct: 263 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTKSKIIKEDKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ EY +L +P+V I+ K
Sbjct: 322 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEYFERFLYENPNVARIIVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIFIVEGDSAGGS K+
Sbjct: 382 GIMASRARVAAKKAREVTRRKSHLEISSLPGKLADCSSKNPDESEIFIVEGDSAGGSTKE 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y ++D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNDKELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS + I R+KGLGEM QLWETT+NP+ RM+ Q+ ++DA EA+ F LMG
Sbjct: 561 LKSELSPTPKWQISRYKGLGEMNADQLWETTMNPDNRMMLQVRLDDAIEADKTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A LD
Sbjct: 621 VVENRRQFIEDNAVYATLD 639
>gi|315659991|ref|ZP_07912849.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|385782961|ref|YP_005759134.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|418415558|ref|ZP_12988763.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635480|ref|ZP_13197855.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|315494892|gb|EFU83229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|339893217|emb|CCB52398.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|374841747|gb|EHS05203.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|410875014|gb|EKS22944.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 644
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/619 (52%), Positives = 427/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V D+ GT IRF D ++FT +D++T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGETDKTGTVIRFKADSEIFTETTVYDYDTLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I L+ E D E+ + + Y + GG++ YV+ +N +K+P+H+ + + D I I++A
Sbjct: 208 GISITLKDERDDEEQRE-DTYHYEGGIKSYVELMNENKEPIHEEPIYIHQMKDDIEIEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G KSK +K+ LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTKSKIIKEDKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ EY +L +P+V I+ K
Sbjct: 326 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEYFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIFIVEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSHLEISSLPGKLADCSSKNPDESEIFIVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNDKELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS + I R+KGLGEM QLWETT+NP+ RM+ Q+ ++DA EA+ F LMG
Sbjct: 565 LKSELSPTPKWQISRYKGLGEMNADQLWETTMNPDNRMMLQVRLDDAIEADKTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A LD
Sbjct: 625 VVENRRQFIEDNAVYATLD 643
>gi|421729501|ref|ZP_16168631.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451348605|ref|YP_007447236.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
gi|407076471|gb|EKE49454.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449852363|gb|AGF29355.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
Length = 638
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 28 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL
Sbjct: 146 AYERGVPVADLEV----IGETDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 202 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 260 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 319 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 439 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 558 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 618 KVEPRRNFIEANARYVKNLD 637
>gi|384263637|ref|YP_005419344.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452854068|ref|YP_007495751.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|380496990|emb|CCG48028.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452078328|emb|CCP20078.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 640
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +
Sbjct: 30 MYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q
Sbjct: 90 MGRPAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL
Sbjct: 148 AYERGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++A
Sbjct: 204 GVNITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+
Sbjct: 262 LQY-NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG
Sbjct: 560 LLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 620 KVEPRRNFIEANARYVKNLD 639
>gi|425737844|ref|ZP_18856114.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
gi|425480997|gb|EKU48159.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
Length = 639
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/622 (51%), Positives = 421/622 (67%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYAS I V + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYASEITVTIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S Y VSGGLHGVG SVVNALSE LEV V+R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGDS--YKVSGGLHGVGSSVVNALSEDLEVYVYRNETVYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + GT IRF D ++F + + T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EIGDTSLNGTTIRFKADPEIFQETTTYQYETLQNRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
++I L+ E + E+ + GG++ YV LN +K PLH+ V R+DV+ +
Sbjct: 204 GISITLKDEREEEEREDNYY--YEGGIKSYVDLLNENKDPLHESPIYVHEQREDVE---V 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ + Y+ +L YAN+I T +GGTH +G K +LTR LNS G+K++ +K+ L+
Sbjct: 259 EIALQY-NRGYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGQKNRLLKEDKERLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE REGLT I+S++ +P+FEGQTKT+LGN EVR++VD+ E +L +P V I
Sbjct: 318 GEDTREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLMENPQVGKII 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K L A +A +AAK+AR++ R+KS L S+LPGKLADCSS P ESEIF+VEGDSAGGS
Sbjct: 378 VEKGLMASRARIAAKKAREVTRRKSGLEVSNLPGKLADCSSKDPSESEIFLVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
K GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GEDF RYH
Sbjct: 438 TKLGRDSRTQAILPLRGKILNVEKSRLDKILNNNEIRMMITAFGTGI-GEDFDISKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KI+I+TDADVDGAHIRTLLLTFFYR+ + L + G IY+ PPLYK+ +GKQ Y ++D E
Sbjct: 497 KIVIMTDADVDGAHIRTLLLTFFYRFMRPLVEAGYIYIAQPPLYKLTQGKQKYYVFNDRE 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L K+KS +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA EA+ F L
Sbjct: 557 LDKLKSELKPTPKWSIARYKGLGEMDADQLWETTMNPEHRSMLQVKLEDAIEADQTFEML 616
Query: 597 MGARVDTRKELIQNAANLVNLD 618
MG V+ R++ I++ A NLD
Sbjct: 617 MGDIVENRRQFIEDNAVYANLD 638
>gi|415883916|ref|ZP_11545945.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
gi|387591711|gb|EIJ84028.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
Length = 640
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 326/620 (52%), Positives = 433/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I V + DNS++V DNGRGIP+ +
Sbjct: 31 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCTEINVTIEKDNSITVVDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT IRF PD ++FT ++FD+ T+A R+RELAFLN
Sbjct: 149 KYERGVPCEDLKV----IGETDRTGTTIRFKPDGEIFTETLEFDYETLANRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED E N+ NEY++ GG++ YV+ LN ++ LH+ + + DGIT+++A
Sbjct: 205 GIRITI--EDKRVE-NKRNEYYYEGGIKSYVEHLNRTREVLHEEPIYMEGEKDGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D ++ + +AN+I T +GGTH G K +LTR +N +K +K+ D +LSGE
Sbjct: 262 LQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKYGIIKENDANLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ P+P+FEGQTKT+LGN EVR V D E +L +P V I+ K
Sbjct: 321 VREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAVTDTIFAENFETFLLENPSVARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAK+AR+L R+K+ L SSLPGKLADCSS P SE+++VEGDSAGGSAKQ
Sbjct: 381 GLMAARARLAAKKARELTRRKNALDVSSLPGKLADCSSKDPSISELYVVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHKI+
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITAIGTGI-GEDFDISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYK+++GK+++Y Y+D +L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRKILEAGYVYIAQPPLYKIQQGKRIEYAYNDRQLEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S PS IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 560 ILSELPSQPKPGIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLEDAIEADETFEILMGD 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA + NLD
Sbjct: 620 KVEPRRQFIEENAIYVKNLD 639
>gi|410656647|ref|YP_006909018.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|410659625|ref|YP_006911996.1| DNA gyrase subunit B [Dehalobacter sp. CF]
gi|409019002|gb|AFV01033.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|409021981|gb|AFV04011.1| DNA gyrase subunit B [Dehalobacter sp. CF]
Length = 644
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/621 (52%), Positives = 435/621 (70%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IEV + S++V DNGRGIP+D+H
Sbjct: 37 MYIGSTSSRGLHHLVYEIVDNSIDEAMAGYCDEIEVIIHQGESITVQDNGRGIPVDMHAK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKF ++ Y VSGGLHGVG+SVVNALS +L V + +DG +Y Q
Sbjct: 97 MQKPAVEVALTVLHAGGKF--NNEAYKVSGGLHGVGMSVVNALSVNLRVEIKKDGKKYSQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDS-KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+YSRGK +T L + + + R GT I F PD ++F I +D+ +A R++EL+FLN
Sbjct: 155 EYSRGKTLTELK----EIGTYQGRSGTMITFQPDPEIFED-IVYDYEVLAHRLKELSFLN 209
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L E ++ K+ YN GL ++V++LN +K P+H + F + D +++
Sbjct: 210 KNVMITLIDERNEA-KDVYNH---NNGLIDFVEYLNKNKDPIHQKAIVFETEKDNTKVEI 265
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +++Y++T+ YAN+I T +GGTH G KA+LTR +N +K+ +K + +LSGE
Sbjct: 266 ALQY-NESYTETLFSYANNINTTEGGTHEAGFKAALTRVVNDYARKNNILKGNENNLSGE 324
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV++ P+FEGQTKT+LGN EVR +VD V E LT + E +P V I+
Sbjct: 325 DVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRSIVDSVVGEGLTTFFEENPAVAKKIVE 384
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K L A +A LAA++ARDL R+KS L S+SLPGKLADC+ P E++IVEGDSAGGSAK
Sbjct: 385 KGLQATRARLAARKARDLTRRKSALESTSLPGKLADCTWKDPRYCEMYIVEGDSAGGSAK 444
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+++FQAILPLRGKILNVE+ + N EI+ +I ALG G+ E+F E RYHK+
Sbjct: 445 QGRNQKFQAILPLRGKILNVEKARLDRILGNTEIRAMITALGTGI-SEEFDIEKARYHKV 503
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIR LLLTFFYRY K L + +Y+ PPL+KV+ GKQ+QY Y D EL
Sbjct: 504 VIMTDADVDGAHIRILLLTFFYRYMKPLIENHYVYIAQPPLFKVKNGKQIQYAYSDKELS 563
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
KV + + IQR+KGLGEM P QLWETT++PE R + Q+ ++DA A+ +F+ LMG
Sbjct: 564 KVMETVGRDKT-EIQRYKGLGEMNPEQLWETTMDPESRTILQVQMDDAMRADELFTMLMG 622
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ RKE IQ +A ++ NLD
Sbjct: 623 DKVEPRKEFIQKHARDVRNLD 643
>gi|345862366|ref|ZP_08814591.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
gi|344324551|gb|EGW36104.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
Length = 659
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 439/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLVYEI+DN++DEA AG+ + I+V + ADNS++V DNGRGIP+D+HP
Sbjct: 51 MYIGTTSSRGLHHLVYEIVDNSIDEALAGFCNQIDVFIHADNSITVVDNGRGIPVDIHPK 110
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A+E LTVLHAGGKFGGS S Y VSGGLHGVGLSVVNALS+ L V V + G YHQ
Sbjct: 111 TGIPAVEVALTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSKWLVVEVSKGGHVYHQ 170
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+ GKP T +++ + + GT+I F PD +F + +D + +A R+REL+FLN
Sbjct: 171 EYAIGKP----TSNLVNIGITESSGTKISFIPDPDIFEDTV-YDFDILAHRLRELSFLNK 225
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+TI L +D N + GG++++V++LN +K LH F + + D + ++++
Sbjct: 226 SVTINL----TDERTNVKETFLHTGGIQDFVRYLNKNKDCLHPQPIFIETIKDHVQVEVS 281
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +L+G+
Sbjct: 282 MQY-NDGYAENLFSYANNINTQEGGTHEAGFKSALTRVVNDYARKNNIIKAADSNLTGDD 340
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP+P+FEGQTKT+LGN E+R +VD + E L+ +LE +P + + K
Sbjct: 341 IREGLTAVISVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLSTFLEENPAIARKFIDK 400
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+KS L +SLPGKLADCS P+ E+++VEGDSAGGSAKQ
Sbjct: 401 SVQAARARDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYLVEGDSAGGSAKQ 460
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE+ + +N EI+ +I A+G G+ E F E RY+K+I
Sbjct: 461 GRDRRFQAILPLRGKIINVEKARLDKILENAEIRAMITAMGTGISDE-FDIEKARYNKLI 519
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + +Y+ PPL+KV++G+ +QY Y D EL K
Sbjct: 520 IMTDADVDGAHIRTLLLTFFYRYMRPLIENHYVYIAQPPLFKVKKGRDIQYAYSDFELGK 579
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + IQR+KGLGEM P QLWETT++P +R + Q+ +EDA + +F+ LMG
Sbjct: 580 ILEKIGKDKV-EIQRYKGLGEMNPEQLWETTMDPAKRTILQVTMEDAIRSEEMFTVLMGD 638
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R++ I +A ++ N+D
Sbjct: 639 KVEPRRDFINLHAKDVRNID 658
>gi|295694693|ref|YP_003587931.1| DNA gyrase subunit B [Kyrpidia tusciae DSM 2912]
gi|295410295|gb|ADG04787.1| DNA gyrase, B subunit [Kyrpidia tusciae DSM 2912]
Length = 635
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 430/620 (69%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+E++DN++DEA AGY +I V + DNSV+V DNGRGIP+ HP
Sbjct: 29 MYIGATSSRGLHHLVWEVVDNSIDEALAGYCDHIVVRVNPDNSVTVIDNGRGIPVGTHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E VLTVLHAGGKF G GY VSGGLHGVG+SVVNALSE LEV VWR+G Y Q
Sbjct: 89 LGKPTVEVVLTVLHAGGKFDGK--GYKVSGGLHGVGVSVVNALSEWLEVEVWREGSAYRQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG PVT L + DR GT++ F PD ++F + F ++ + GR+RELAFLN
Sbjct: 147 RYSRGVPVTPLER----LGPTDRTGTQVTFKPDPEIFEDVV-FQYDILQGRLRELAFLNA 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+TI L D + E+ + GG+ +V++LN K+ LH V + D + +++A
Sbjct: 202 GITIIL----EDARDGRRQEFAYQGGIRSFVEYLNRSKEVLHQPPVYIAAEKDDVMVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y ++ +AN+I T +GGTH G K++LTR +N +K+ +KD D +++GE
Sbjct: 258 LQY-NDGYVPSLYSFANNIHTHEGGTHESGFKSALTRVINDYARKNNLLKDSDSNVTGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P+P+FEGQTKT+LGN EVR +V+ + E +LE +P V I+ K
Sbjct: 317 VREGLTAIISVKIPDPQFEGQTKTKLGNSEVRGIVESAFGERFVVFLEENPAVARKIVDK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A +A AA++AR+L R+K+ L SSLPGKL DCSS ESE+++VEGDSAGGSAK
Sbjct: 377 CITAARAREAARKARELTRRKNALEVSSLPGKLWDCSSKDASESELYLVEGDSAGGSAKS 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I A+G G++ DF RYHK++
Sbjct: 437 GRDRHFQAILPLRGKILNVEKARMDKILSNNEIRAIITAIGTGIE-PDFDISRARYHKVV 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L + G +Y+ PPLY++++GK V+Y Y D E
Sbjct: 496 IMTDADVDGSHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYRIQKGKVVRYAYSDQERDH 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + IQR+KGLGEM QLWETT++PE R L Q+ ++DA EA+ +FS LMG
Sbjct: 556 IVGELKGD-VNDIQRYKGLGEMDAEQLWETTMDPESRTLLQVSMQDAIEADAIFSVLMGD 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R+E I+ A+ V NLD
Sbjct: 615 RVEPRREFIEAHAHFVRNLD 634
>gi|311032261|ref|ZP_07710351.1| DNA gyrase subunit B [Bacillus sp. m3-13]
Length = 636
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY S I V + DNS++V DNGRGIP+ +H
Sbjct: 26 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCSEINVIVEKDNSITVKDNGRGIPVGIHEK 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS L++ V RDG ++Q
Sbjct: 86 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSELKIYVHRDGKIHYQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++++G P L + D GT I F PD+++FT ++D++T+A R+RELAFLN
Sbjct: 144 QFNKGVPNEDLKI----IGETDVTGTIIHFVPDEEIFTETKEYDYDTLAHRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
+ I + ED E + NEY + GG+ YV+ LN K+ +H+ V F + + DGI+I++A
Sbjct: 200 GIRITI--EDKREETPKKNEYHYEGGIASYVEHLNRTKEVIHEEVVFVEGEKDGISIEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE
Sbjct: 258 LQY-NDSYTSNLYSFANNISTYEGGTHESGFKTALTRVINDYARKNNIFKDADSNLTGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ P+P+FEGQTKT+LGN E R V D E +L +P I+ K
Sbjct: 317 VREGLTAIVSIKHPDPQFEGQTKTKLGNSEARTVTDSVFTEKFEGFLLENPSAARKIVEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI++VEGDSAGGSAKQ
Sbjct: 377 GLMASRARMAAKKARELTRRKSALEISSLPGKLADCSSKDPSISEIYVVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKI+
Sbjct: 437 GRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDISRARYHKIV 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPLYK+++GK+++Y Y+D +L++
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLYKIQQGKKIEYAYNDRQLEE 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++ IQR+KGLGEM P QLWETT++P R L Q+ ++DA EA+ F LMG
Sbjct: 556 ILATMSDQPKAGIQRYKGLGEMNPEQLWETTMDPVSRTLLQVSLQDAIEADETFEILMGD 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+ IQ+ A V NLD
Sbjct: 616 KVEPRRNFIQDNARYVKNLD 635
>gi|406829974|gb|AFS63977.1| DNA gyrase subunit B [Cloacibacillus sp. CL-84]
Length = 647
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 308/620 (49%), Positives = 433/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYE++DN++DE+ AG+ I V + D SV+V DNGRGIP +LH
Sbjct: 40 MYIGDQSQRGLHHLVYEVVDNSIDESLAGFCDTINVTINPDGSVTVIDNGRGIPTELHE- 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ KSA E VLTVLHAGGKF S Y VSGGLHGVG+SVVNALS LE+T+WRDG E+HQ
Sbjct: 99 SGKSAAEVVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVVNALSVWLELTIWRDGKEHHQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+T L + +GTR++F PD ++F+T +F + + R+RELAFLN
Sbjct: 157 RYERGIPMTQLEV----TGDTELRGTRVQFMPDDEIFSTT-EFQADILKQRLRELAFLNS 211
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
+TI ED EK + Y + GG+ +V++LN K+ L + V + D +++A
Sbjct: 212 HITINF--EDQRSEKPEKKSYHYPGGISAFVEYLNKGKEVLFKEPVVINGEKDKTQLEVA 269
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + G+ N I TI+GGTH+ G ++++TR +N +K K +K+KD +LSG+
Sbjct: 270 IQY-NDTYIERLFGFVNLINTIEGGTHVAGFRSAMTRAINDEARKLKILKEKDANLSGDD 328
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EGLT +ISV+V P+FEGQTKT+LGN +V+ +VD V E L L+ P++L I+
Sbjct: 329 LKEGLTAVISVKVMEPQFEGQTKTKLGNNDVKGIVDSIVYEGLKNALDERPEILKPIVES 388
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+A++LVR+KSV+ +LPGKL+DCS+ P + EI+IVEGDSAGGSAKQ
Sbjct: 389 ALRARQAREAAKKAKELVRRKSVMSGLTLPGKLSDCSNRNPADCEIYIVEGDSAGGSAKQ 448
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVE+ + +E I+N+I ALG GV G+DF ++ LRYHKI
Sbjct: 449 GRNREFQAILPLRGKILNVEKARLEKILSSETIRNIILALGCGV-GDDFNEDKLRYHKIF 507
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDGAHIRTLLLT F+RY + ++G +YV PPL++V+ GK++ YC+ + E+K+
Sbjct: 508 IMADADVDGAHIRTLLLTLFFRYMPQIIEKGYLYVAQPPLFRVQCGKEITYCFSEKEMKE 567
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ + +QR+KGLGEM QLWETT+NPE R++ ++ ++DA EA+ +F LMG
Sbjct: 568 AQNKANGKKV-EVQRYKGLGEMNAEQLWETTMNPEHRIINRVEVQDAVEADELFGILMGD 626
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R++ I+ V NLD
Sbjct: 627 VVEPRRKFIEQYGKEVKNLD 646
>gi|20806552|ref|NP_621723.1| DNA gyrase subunit B [Thermoanaerobacter tengcongensis MB4]
gi|20514990|gb|AAM23327.1| DNA gyrase (topoisomerase II) B subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 654
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/621 (52%), Positives = 438/621 (70%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 48 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 107
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q
Sbjct: 108 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSERLEVIVKQRGKVFRQ 165
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + + GT I F PDK++F I FD++ +A R+RELAFLN
Sbjct: 166 VYERGVPKTPLEV----IGETEETGTIITFKPDKEIFE-EIVFDYDILAQRLRELAFLNK 220
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E D ++ +N + GGL +V++LN +K+ LH+ + K+ D +++
Sbjct: 221 GINIKLIDE-RDGKEEVFN---YEGGLIAFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEV 275
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D+Y++ + +AN+I T +GGTH+ G K++LT+ +N KK +KD + +L GE
Sbjct: 276 CMQY-NDSYNENIYSFANNIDTKEGGTHLIGFKSALTKVINDYAKKYGMIKDGEKNLQGE 334
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKTRLGNPE+R +V+ V E L+ YLE +P V I+
Sbjct: 335 DVREGLTAIVSVKLKNPQFEGQTKTRLGNPEMRSIVEGVVTEKLSAYLEENPSVARIIVE 394
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+L A +A AA++AR+L R+KS L +++LPGKLADCS P + E+FIVEGDSAGGSAK
Sbjct: 395 KALQAARAREAARKARELTRRKSALENTALPGKLADCSEKDPSKCELFIVEGDSAGGSAK 454
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ ++ NEEI+++I ALG G+ GEDF LRYHK+
Sbjct: 455 AGRNSRFQAILPLRGKILNVEKARLDKIFSNEEIRSIITALGTGI-GEDFDISKLRYHKV 513
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDG+HIRTLLLTFF+R+ K L + G IY+ PPLYK+ +GK+V Y Y D EL
Sbjct: 514 IIMTDADVDGSHIRTLLLTFFFRFMKPLIENGHIYIAQPPLYKITKGKKVYYAYSDRELD 573
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ S + +QR+KGLGEM QLWETT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 574 KILSEIGRENIV-VQRYKGLGEMNADQLWETTMDPEKRTMLKVTLEDAIAADEIFTILMG 632
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 633 DKVEPRREFIEKYAKTVRNLD 653
>gi|317126747|ref|YP_004093029.1| DNA gyrase subunit beta [Bacillus cellulosilyticus DSM 2522]
gi|315471695|gb|ADU28298.1| DNA gyrase, B subunit [Bacillus cellulosilyticus DSM 2522]
Length = 640
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 313/620 (50%), Positives = 426/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGY I V + DNS++V DNGRGIP+ +H
Sbjct: 31 MYIGSTSGRGLHHLVWEIVDNSIDEAMAGYCDTITVTIEEDNSITVEDNGRGIPVGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V DG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVEVHLDGKVHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG P L + D+ GT I+F PD ++FT ++D++T+A R+RELAFLN
Sbjct: 149 MFERGVPSADLKV----IGETDKTGTIIKFKPDNEIFTETTEYDYDTLANRLRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
L I + + +D +K EYF+ GG+ +V+ LN K+P+H+ F + DGI++++A
Sbjct: 205 GLRILISDKRNDGKKA---EYFYEGGISSFVEHLNRTKEPIHEPPVFIESEKDGISVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +L G+
Sbjct: 262 MQY-NDSFASNLYSFANNINTHEGGTHESGFKTALTRVINDYARKNSLFKETDPNLIGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P+P+FEGQTKT+LGN E R + D E++ +Y+ +P+V I+ K
Sbjct: 321 VREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSLFSEHMAKYMAENPNVARKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AAK+AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 381 GIMASRARDAAKKARELTRRKSALEVSSLPGKLADCSSKDATISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I ALG G+ G DF RYHKII
Sbjct: 441 GRDRHFQAILPLRGKILNVEKSRLDKILSNNEVRAIITALGTGIGG-DFDISKARYHKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ PPL+K+++GK VQY Y++ E+++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRPLLEEGYVYIAQPPLFKIQQGKTVQYAYNEKEMER 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +QR+KGLGEM P QLWETT++P R Q+ +EDA A+ F +LMG
Sbjct: 560 IIKELAETPKPGLQRYKGLGEMNPTQLWETTMDPSTRTTLQVTLEDAMVADETFETLMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ NA + NLD
Sbjct: 620 KVEPRREFIQANAQYVKNLD 639
>gi|210624032|ref|ZP_03294149.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
gi|210153239|gb|EEA84245.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
Length = 633
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 337/620 (54%), Positives = 435/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG S I VA+ AD S++V D+GRGIP+++HP
Sbjct: 25 MYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSKIYVAINADGSITVEDDGRGIPVEVHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S LETVLTVLHAGGKFGG S LHGVG+SVVNALSE L V RDG Y Q
Sbjct: 85 TGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWLVAEVHRDGKAYRQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G P T L V D GT I F PD +VF I+F +T+ R+REL+FLN
Sbjct: 143 EYKKGNPQTKLEV----VGESDHTGTIISFMPDAEVFD-EIEFSFDTLEYRLRELSFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I ED K +Y ++ + GGL EYV++LN + +H D+V K VD +++A
Sbjct: 198 GIKIIF--EDKREGKEKYRDFHYTGGLVEYVKFLNKSRTGIHEDIVYIDKKVDDCLVEIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT+T+N K++ +KDKD +LSGE
Sbjct: 256 MQY-TDGYTENIYSFANNINTHEGGSHLAGFKAALTKTINEYAKRNGALKDKDSNLSGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P+P+FEGQTKT+LGN +R +VD E L +LE +P+ I+ K
Sbjct: 315 IREGLTAVVSVKLPDPQFEGQTKTKLGNTFMRGIVDGVTVEELGSFLEENPNTAKVIVDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAKRAR+L R+KSVL S+SLPGKLADCS P +SEIF+VEGDSAGGSAKQ
Sbjct: 375 ALRAQRAREAAKRARELTRRKSVLESTSLPGKLADCSEKDPSKSEIFLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + ++EI+N+I A G G+ G DF E RYHKII
Sbjct: 435 GRDRNTQAILPLRGKILNVEKSRLDKILASDEIKNMITAYGCGI-GNDFDLEKARYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L +EG +Y PPLYKV + K+ Y Y D EL
Sbjct: 494 IMTDADVDGAHIRTLLLTFFFRYMRPLIEEGYVYAAQPPLYKVTKQKKEYYVYSDKELDD 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + Y IQR+KGLGEM P QLW+TT+NPE R L Q+ IEDAA A+ +FS LMG
Sbjct: 554 LLNEIGRDK-YDIQRYKGLGEMNPEQLWDTTMNPETRTLLQVTIEDAAIADEIFSMLMGD 612
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V R+E IQ NA + NLD
Sbjct: 613 KVAPRREFIQENAKYVRNLD 632
>gi|365155917|ref|ZP_09352259.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
gi|363627842|gb|EHL78686.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
Length = 643
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 330/623 (52%), Positives = 430/623 (69%), Gaps = 18/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY S I V + DNS++V DNGRGIP+D+
Sbjct: 33 MYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEINVIVEEDNSITVIDNGRGIPVDIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG Y+Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGNIYYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + DR GT + F PD ++FT FD++ +A RIRELAFLN
Sbjct: 151 KYRRGVPVEDLKT----IGHTDRTGTTVHFKPDPEIFTETTVFDYDVLATRIRELAFLNR 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I + ED + + NEY + GG++ YV LN K+ LH+ V G + D I +
Sbjct: 207 NIKITI--EDRREGQKRKNEYHYEGGIKSYVAHLNRTKEVLHEEPIYVEGLKDD---IQV 261
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ ++ +S + +AN+I T +GGTH G K +LTR +N +K+ +KD D +LS
Sbjct: 262 EIALQY-NEGFSSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNGLIKDSDQNLS 320
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT I+S++ PNP+FEGQTKT+LGN E R V D E+ YL +P V I
Sbjct: 321 GEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTVTDALFSEHFETYLLENPSVARKI 380
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K L A +A LAAK+AR+L R+KS L SSLPGKLADCSS P SE+FIVEGDSAGGS
Sbjct: 381 VEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSRDPSISELFIVEGDSAGGS 440
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GE+F RYH
Sbjct: 441 AKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEIRMIITALGTGI-GEEFDISKARYH 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K++I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+++Y Y+D +
Sbjct: 500 KVVIMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYVYIAQPPLYKVSQGKRIEYAYNDRQ 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L ++ SS P + IQR+KGLGEM P QLWETT++PE+R + Q+ +EDA EA+ F L
Sbjct: 560 LDEILSSLPESPKPGIQRYKGLGEMNPEQLWETTMDPEKRAMLQVSLEDAIEADETFEML 619
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA ++ NLD
Sbjct: 620 MGDKVEPRRQFIEENALHVKNLD 642
>gi|448399828|ref|ZP_21571061.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
gi|445668281|gb|ELZ20911.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
Length = 643
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 306/615 (49%), Positives = 425/615 (69%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I V + DNSVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVTIHEDNSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V R+G +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRNGGVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ D GT IRFWPD +F T +F +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RVRDMEPDDETGTEIRFWPDTGIFETG-EFAFSTLSNRLRELAFLNS 202
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITID 237
+ I LR +E+ + Y + GG+ E+V++LN + +HD V + D D I ++
Sbjct: 203 GVRITLRDEREEKSDDGPVAETYEYDGGIREFVEYLNETRSAMHDDVIYFDDEDQNIQVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GG+H+ G K +LTRT+N ++ + D + +L G
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGSHLTGFKTALTRTVNDYANENDLLSDLEDNLKG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+
Sbjct: 322 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSA
Sbjct: 382 TKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 442 KQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DRIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 621 GDAVEPRKQFIKDHA 635
>gi|313892202|ref|ZP_07825795.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
gi|313119340|gb|EFR42539.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
Length = 646
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 432/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV+L D S +V DNGRGIP +H
Sbjct: 38 MYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVSLNDDGSCTVVDNGRGIPTGMHE- 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K A+E VLTVLHAGGKFGG GY++SGGLHGVG+SVVNALSE +V V RDG +
Sbjct: 97 TGKPAMEVVLTVLHAGGKFGGE--GYAISGGLHGVGISVVNALSEWTKVNVRRDGKFHEM 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG ++ + GT + F PD +F FD++T+ R+RELAFLN
Sbjct: 155 AFCRGDVTESMRTY----GETSETGTTVTFKPDPLIFKEGTDFDYDTLKVRMRELAFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L D+ ++ E+ +AGG+ E++++LN K +HD V+ F + D I +D+A
Sbjct: 211 GLRITL--SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDAVHDDVISFEGERDKIIVDIA 268
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + YS++M + N I T +GG H+ G +++LTRT+N + + +K+ + +L+G+
Sbjct: 269 MQYQT-GYSESMYTFVNDINTTEGGMHLSGFRSALTRTINDYARTNNLLKENEDNLTGDD 327
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ VVD V E L YLE HP I+ K
Sbjct: 328 VREGLTCVISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVSEGLHIYLEEHPAEARLIVEK 387
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A +A AAKRAR+L R+K+ L SSLPGKL+DCS P+++EI+IVEGDSAGGSAK
Sbjct: 388 GITASRAREAAKRARELTRRKNALEVSSLPGKLSDCSEKDPKKTEIYIVEGDSAGGSAKS 447
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A G GV E F LRY+KII
Sbjct: 448 GRDRRYQAILPLRGKILNVEKARVDRVLNSDTIRMMITAFGTGVS-EGFDISKLRYYKII 506
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PPLY+V +G+Q Y YDD E K
Sbjct: 507 IMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAKPPLYQVRKGRQKYYTYDDDEQNK 566
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLW TT+NPEQR++ ++ + DA EA+ +F+ LMG
Sbjct: 567 LLDEIGRDGC-TIQRYKGLGEMDPEQLWNTTMNPEQRVMMRVELTDAVEADRLFTILMGD 625
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA N+ NLD
Sbjct: 626 KVEPRRKFIEENAMNVTNLD 645
>gi|147676340|ref|YP_001210555.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
gi|146272437|dbj|BAF58186.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
Length = 643
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 333/620 (53%), Positives = 437/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEV L D S +V DNGRGIP+D+HP
Sbjct: 37 MYIGSTSARGLHHLVYEVVDNSIDEAMAGFCDRIEVILNEDGSATVIDNGRGIPVDIHPK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E V+T+LHAGGKFGG S LHGVG+SVVNALS LEV V RDG Y+Q
Sbjct: 97 TGRPAVEVVMTMLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSLWLEVEVKRDGKVYYQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG PVT L L GT++ F PD ++F I F+ + +A R+REL+FLN
Sbjct: 155 RYSRGIPVTGL----LVKGKSSATGTKVTFMPDPEIFEDLI-FNQDILAQRLRELSFLNM 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L+ D Q + GG+ ++V++LN K PLH + +K D + +++A
Sbjct: 210 GVKIILK----DRRSGQETVFQHDGGIMDFVRYLNKSKTPLHGKPIYIQKQKDDVLVEVA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y +++L YAN+I TIDGGTH G KA+LTR +N G+K +K+ +LSGE
Sbjct: 266 LQY-TDTYVESILSYANNINTIDGGTHEAGFKAALTRVINDYGRKYNLLKNGAGNLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP P+FEGQTKT+LGN EVR +VD V E L +LE +P + IL K
Sbjct: 325 IREGLTAVISVKVPEPQFEGQTKTKLGNSEVRSIVDSVVGEGLGIFLEENPSIARRILEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A AA++AR+L R+KS L S+LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 385 AVTASRAREAARKARELTRRKSALEGSTLPGKLADCSERDPSVSELYLVEGDSAGGSAKQ 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ GE+F RYHKII
Sbjct: 445 GRDRRFQAILPLRGKILNVEKARLDKILANEEIRAMITALGTGI-GEEFDVSKARYHKII 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+++DADVDGAHIRTLLLTFFYRY + L ++G +++ PPLY+V++GK +Y Y DAEL+K
Sbjct: 504 LMSDADVDGAHIRTLLLTFFYRYMRPLIEKGYVFIAQPPLYRVKKGKLEKYAYSDAELEK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + SIQR+KGLGEM QLWETT++PE R + Q+ +EDA EA+ VFS LMG
Sbjct: 564 LLDQIGRDGV-SIQRYKGLGEMNAEQLWETTMDPETRTVMQVNLEDAIEADAVFSMLMGD 622
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R++ IQ A LV NLD
Sbjct: 623 RVEPRRDFIQENARLVRNLD 642
>gi|399949942|gb|AFP65598.1| gyrB [Chroomonas mesostigmatica CCMP1168]
Length = 690
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/627 (51%), Positives = 439/627 (70%), Gaps = 12/627 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
++IGSTG +GLHHL YEI+DN+VDEA AGY S+I + + ++ S+++ D GRGIP D+HP
Sbjct: 69 VFIGSTGIKGLHHLAYEIIDNSVDEALAGYCSDILICINSNMSLTIKDKGRGIPTDIHPV 128
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K+ALETVLT+LHAGGK GY VSGGLHGVG+SVVNALSE + R
Sbjct: 129 TGKTALETVLTILHAGGK--FGGGGYKVSGGLHGVGVSVVNALSEFFHINTRRIQRRCSM 186
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK + + + +S + GT + F PD Q+F+ + +D I R+ ELAFLN
Sbjct: 187 RFVRGKTIGEIKINQKSRNSLEINGTSVNFKPDFQIFSGSFVYDSFIIGERLNELAFLNS 246
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + ED K + + + +AGG+ EY+ L+ K P+H ++ K+ G+ + +AL
Sbjct: 247 DLKLII--EDRRKNKIKKSIFKYAGGISEYIIALSKKKSPIHPIINIDKEFKGMNMQIAL 304
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
QW + S+ +L + N+I+T +GGTH++ +K LTRTLN G+KS K+ +LSG+ +
Sbjct: 305 QWTKEHSSENILSFVNNIKTNEGGTHLDSLKVVLTRTLNYFGRKSGKFKENFPNLSGDFI 364
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL-HPDVLDSILSK 359
REGL IISV++P PEFEGQTK++LGNPE+R V+D V YL E+ E+ +PD SIL K
Sbjct: 365 REGLFGIISVKIPEPEFEGQTKSKLGNPEIRGVIDTVVGNYLKEFFEIQNPDACFSILEK 424
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +AA AAK+A++L+R+KS L +LPGKLADCS P+ESEIFIVEGDSAGGSAKQ
Sbjct: 425 AIAAFQAAEAAKKAKELIRRKSALEFITLPGKLADCSIKNPKESEIFIVEGDSAGGSAKQ 484
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQAILPLRGKI+N+E+ DE +YKN EIQ LI ALGLG +G+ FK + LRY +II
Sbjct: 485 ARDRMFQAILPLRGKIINIEKTDETKIYKNTEIQALISALGLGTRGDLFKIDQLRYRRII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-GKQVQ----YCYDD 534
I+TDADVDGAHIRTLLLTFFYRYQ+ L + G +Y+ PPLYK+E GK + YCY D
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYQRKLIENGFVYIACPPLYKIEDVGKNKKNFKNYCYSD 604
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL+ S ++QRFKGLGEMMP QLWETT+NP R+LK++ + D +A+ +F+
Sbjct: 605 GELEFFMSRMSKKI--NVQRFKGLGEMMPEQLWETTMNPSTRILKKVEVIDLIKADRIFN 662
Query: 595 SLMGARVDTRKELIQNAANLVNLDHLD 621
LMG +V RKE IQ A+ + L+++D
Sbjct: 663 VLMGDKVFARKEFIQIHADKMRLENID 689
>gi|329121792|ref|ZP_08250408.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
gi|327468065|gb|EGF13553.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
Length = 646
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 432/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV+L D S +V DNGRGIP +H
Sbjct: 38 MYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVSLNDDGSCTVVDNGRGIPTGMHE- 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E VLTVLHAGGKFGG GY++SGGLHGVG+SVVNALSE +V V RDG +
Sbjct: 97 TGRPAMEVVLTVLHAGGKFGGE--GYAISGGLHGVGISVVNALSEWTKVNVRRDGKFHEM 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG ++ + GT + F PD +F FD++T+ R+RELAFLN
Sbjct: 155 AFCRGDVSESMRTY----GETSETGTTVTFKPDPLIFKEGTDFDYDTLKVRMRELAFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L D+ ++ E+ +AGG+ E++++LN K +HD V+ F + D I +D+A
Sbjct: 211 GLRITL--SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDAVHDDVISFEGERDKIIVDIA 268
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + YS++M + N I T +GG H+ G +++LTRT+N + + +K+ + +L+G+
Sbjct: 269 MQYQT-GYSESMYTFVNDINTTEGGMHLSGFRSALTRTINDYARTNNLLKENEDNLTGDD 327
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+ISV+VPNP+FEGQTKT+LGN EV+ VVD V E L YLE HP I+ K
Sbjct: 328 VREGLTCVISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVSEGLHIYLEEHPSEARLIVEK 387
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A +A AAKRAR+L R+K+ L SSLPGKL+DCS P+++EI+IVEGDSAGGSAK
Sbjct: 388 GITASRAREAAKRARELTRRKNALEVSSLPGKLSDCSEKDPKKTEIYIVEGDSAGGSAKS 447
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A G GV E F LRY+KII
Sbjct: 448 GRDRRYQAILPLRGKILNVEKARVDRVLNSDTIRMMITAFGTGVS-EGFDISKLRYYKII 506
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PPLY+V +G+Q Y YDD E K
Sbjct: 507 IMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAKPPLYQVRKGRQKYYTYDDDEQNK 566
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLW TT+NPEQR++ ++ + DA EA+ +F+ LMG
Sbjct: 567 LLDEIGRDGC-TIQRYKGLGEMDPEQLWNTTMNPEQRVMMRVELTDAVEADRLFTILMGD 625
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA N+ NLD
Sbjct: 626 KVEPRRKFIEENAMNVTNLD 645
>gi|319651104|ref|ZP_08005238.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
gi|317397274|gb|EFV77978.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
Length = 642
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 430/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY S I V + DNS++V DNGRGIP+ +H
Sbjct: 33 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCSEINVIIEKDNSITVVDNGRGIPVGIHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +Y+Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTVLEVFVHRDGQKYYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG P L + D GT I F PD ++FT +++D+ T+A RIRELAFLN
Sbjct: 151 KFERGVPSADLEV----IGETDHTGTTIHFKPDSEIFTETLEYDYETLANRIRELAFLNR 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I + + E+N+ +EY + GG++ YV+ LN K+ LH+ + + +GIT++++
Sbjct: 207 GLKITI---EDKREENKKSEYMYEGGIKSYVEHLNRTKEVLHEEPIYIDGEREGITVEVS 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D ++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +LSGE
Sbjct: 264 IQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNGVFKESDANLSGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV+ P+P+FEGQTKT+LGN EVR D E L +++ +P V I+ K
Sbjct: 323 VREGLTAIVSVKHPDPQFEGQTKTKLGNSEVRAATDTIFSEALEKFMLENPTVARKIVEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAK+AR+L R+KS L SSLPGKLADCSS P SE+++VEGDSAGGSAKQ
Sbjct: 383 GLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYVVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHKI+
Sbjct: 443 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITAIGTGI-GEDFDISRARYHKIV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPLYK+++GK+++Y Y+D EL K
Sbjct: 502 IMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYIYIAQPPLYKIQQGKKIEYAYNDRELDK 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ PS IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 562 ILGELPSQPKPGIQRYKGLGEMNPGQLWETTMNPESRTLLQVNLEDAIEADETFEILMGD 621
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 622 KVEPRRNFIEENAVYVKNLD 641
>gi|375092559|ref|ZP_09738837.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
gi|374560728|gb|EHR32085.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
Length = 637
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 319/623 (51%), Positives = 431/623 (69%), Gaps = 18/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AG A +I V L D S V DNG GIP+ H
Sbjct: 27 MYIGSTDERGLHHLVYEVVDNSVDEALAGRADSIVVELHQDGSCEVTDNGSGIPVKKHAT 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT+LHAGGKF S Y+ SGGLHGVG+SVVNALS L + RDG Y Q
Sbjct: 87 TGKSTLETVLTILHAGGKF--DSEAYAFSGGLHGVGVSVVNALSTKLVAEIRRDGYRYTQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+GKP T L H + D GT IRFWPD +VF T + F+ T+ R E+ FLN
Sbjct: 145 EFSQGKPKTKLQKH----EETDETGTSIRFWPDGEVFET-LDFNRATLEKRFEEMTFLNE 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
L I L DP ++ E F A GGL +V++LN + LHD V+ ++ VDG +D
Sbjct: 200 GLKITLIDYREDP---KFEEDFIAEGGLSTFVKFLNKKRTALHDDVIHYKGMVDGSEVDF 256
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D+YS+ +L +AN++ T +GGTH+ G ++ LT+T+N+ ++ +K+KD + SGE
Sbjct: 257 AMQY-TDSYSENVLSFANTVLTGEGGTHLTGFRSGLTKTINNYAREYDFLKEKDENYSGE 315
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+T II+V++ NP+FEGQTK +LG+ E+R +VD V E L+EYLE +P + I+
Sbjct: 316 DIREGITAIIAVKLSNPQFEGQTKGKLGSSEMRGIVDTFVSEKLSEYLEENPKIAKKIMD 375
Query: 359 KSLSALKAALAAKRARDLVRQK-SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K SA +A +A+K+ARDL R K S+L S++LPGKLA+C ST E+E+FIVEGDSAGGSA
Sbjct: 376 KCESARRARVASKKARDLSRNKNSLLSSTTLPGKLAECQSTDITENELFIVEGDSAGGSA 435
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K GRD ++QAILP+RGKILNVE+ A + +EEI+ LI A G G+ GEDF + LRY K
Sbjct: 436 KLGRDNKYQAILPIRGKILNVEKARIAKVLSSEEIKALITAFGTGI-GEDFDIKNLRYGK 494
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II++TDADVDGAHI TLLLTF YRY + L + G +++ PPL+KV +GK+ +Y YD+ EL
Sbjct: 495 IILMTDADVDGAHIDTLLLTFLYRYMRPLIENGNVFIAQPPLFKVTQGKKERYVYDEKEL 554
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA-EANVVFSSL 596
K + + Y I R+KGLGEM QLWETT++PE R+L Q+ I++ + + F++L
Sbjct: 555 KSIIENIKGEN-YKINRYKGLGEMNAEQLWETTMHPEHRVLIQVKIDNESITLDDTFNTL 613
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R+E I +NA N+D
Sbjct: 614 MGDKVEPRREFIEENAKFATNID 636
>gi|254478916|ref|ZP_05092278.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
gi|214035138|gb|EEB75850.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
Length = 654
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/621 (52%), Positives = 437/621 (70%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 48 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 107
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q
Sbjct: 108 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSERLEVIVKQRGKVFRQ 165
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + + GT I F PDK++F I FD++ +A R+RELAFLN
Sbjct: 166 VYERGVPKTPLEV----IGETEETGTIITFKPDKEIFE-EIVFDYDILAQRLRELAFLNK 220
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E D ++ +N + GGL +V++LN +K+ LH+ + K+ D +++
Sbjct: 221 GINIKLIDE-RDGKEEVFN---YEGGLIAFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEV 275
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D+Y++ + +AN+I T +GGTH+ G K++LT+ +N KK +KD + +L GE
Sbjct: 276 CMQY-NDSYNENIYSFANNIDTKEGGTHLIGFKSALTKVINDYAKKYGMIKDGEKNLQGE 334
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKTRLGNPE+R +V+ V E L+ YLE +P V I+
Sbjct: 335 DVREGLTAIVSVKLKNPQFEGQTKTRLGNPEMRSIVEGVVTEKLSAYLEENPSVARIIVE 394
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+L A +A AA++AR+L R+KS L +++LPGKLADCS P + E+FIVEGDSAGGSAK
Sbjct: 395 KALQAARAREAARKARELTRRKSALENTALPGKLADCSEKDPSKCELFIVEGDSAGGSAK 454
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+++I ALG G+ GEDF LRYHK+
Sbjct: 455 AGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRSIITALGTGI-GEDFDISKLRYHKV 513
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDG+HIRTLLLTFF+R+ K L + G IY+ PPLYK+ +GK+V Y Y D EL
Sbjct: 514 IIMTDADVDGSHIRTLLLTFFFRFMKPLIENGHIYIAQPPLYKITKGKKVYYAYSDRELD 573
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ S + +QR+KGLGEM QLWETT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 574 KILSEIGRENIV-VQRYKGLGEMNADQLWETTMDPEKRTMLKVTLEDAIAADEIFTILMG 632
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 633 DKVEPRREFIEKYAKTVRNLD 653
>gi|169830224|ref|YP_001716206.1| DNA gyrase subunit B [Candidatus Desulforudis audaxviator MP104C]
gi|169637068|gb|ACA58574.1| DNA gyrase, B subunit [Candidatus Desulforudis audaxviator MP104C]
Length = 635
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/624 (51%), Positives = 435/624 (69%), Gaps = 23/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHL++E++DN++DEA AG+ IEV + ADNSV+V+DNGRGIP+D+HP
Sbjct: 28 MYIGSTGPKGLHHLIFEVVDNSIDEALAGFCDYIEVVIHADNSVTVSDNGRGIPVDIHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE VLT LHAGGKFGG+ Y +SGGLHGVG+SVVNALS +EV V R+G Y Q
Sbjct: 88 VGRPALEVVLTRLHAGGKFGGTQ--YKISGGLHGVGVSVVNALSRRMEVEVKREGYRYRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG L +D D GTR+ F PD +F ++F ++ +A R+REL+FLN
Sbjct: 146 EFERGLATGELEL----LDEADETGTRVTFIPDPDIFEE-VEFQYDVVAKRLRELSFLNA 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
+T+ LR E + +K Y +AGG+ ++V+ LN K+ L D + +G+ +++A
Sbjct: 201 GVTLVLRDERTGRDKV----YQYAGGIRDFVRHLNLHKEVLPADPIYVEDHKNGVWVEVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ ++ + + YAN+I T+DGGTH G K++LTRT+N +K VK+ SLSGE
Sbjct: 257 VQYVVNSDRELIFSYANTIHTVDGGTHEAGFKSALTRTINDYARKYNLVKND--SLSGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +I+V+VP P+FEGQTKT+LGN EVR +VD V + L YLE HP I+ +
Sbjct: 315 IREGLTAVINVKVPEPQFEGQTKTKLGNSEVRGLVDWVVSQRLAAYLEEHPTEARQIVQR 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA+RAR+L ++KS+L S++LPGKLADCS P+ SE+++VEGDSAGGSAKQ
Sbjct: 375 AVVASRAREAARRARELTKRKSLLESATLPGKLADCSRRDPQHSELYLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILN E+ + NEEI+ LI A+G G GEDF RYH+I+
Sbjct: 435 GRDREFQAILPLRGKILNAEKARRDKLLGNEEIRALITAIGTGF-GEDFDLAKARYHRIV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RG-KQVQYCYDDAEL 537
I+TDADVDG+HIRTLLLTFFYRY K L D G +Y+ PPLY+V +G K Y Y D +L
Sbjct: 494 IMTDADVDGSHIRTLLLTFFYRYMKPLIDAGYVYIAQPPLYRVSGKGRKNGVYLYSDQQL 553
Query: 538 KKVKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ F N +SIQR+KGLGEM P QLW+TTL+PE R + Q+ +EDA A + S+
Sbjct: 554 EQF---FRENGRQNWSIQRYKGLGEMNPEQLWDTTLDPENRTMLQVTLEDALAAEQLLST 610
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+E IQ A V NLD
Sbjct: 611 LMGEQVEPRREFIQQHAREVRNLD 634
>gi|284161217|ref|YP_003399840.1| DNA gyrase subunit beta [Archaeoglobus profundus DSM 5631]
gi|284011214|gb|ADB57167.1| DNA gyrase, B subunit [Archaeoglobus profundus DSM 5631]
Length = 632
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 325/619 (52%), Positives = 419/619 (67%), Gaps = 21/619 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY+GSTG RG HHL++EI+DN++DEA AGY + I V L D S SV DNGRGIP++ HP
Sbjct: 33 MYVGSTGSRGFHHLLWEIVDNSIDEALAGYCNRIVVTLHKDGSASVEDNGRGIPVEEHPI 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K ALE V+T LHAGGKF S Y VSGGLHGVGLSVVNALSE LEV V R+G Y+Q
Sbjct: 93 FKKPALEIVMTKLHAGGKF--SKKAYKVSGGLHGVGLSVVNALSEWLEVWVKRNGKIYYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT L V GT+IRF PD ++F +FD++ +A R+RELAFLN
Sbjct: 151 RYERGKPVTPLKV----VGETKETGTKIRFKPDPEIFEVK-EFDYDVVAERLRELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L I L E + K Y+E G +V++LN K + DVV + +GI +++A
Sbjct: 206 GLRIKLIDERTGKVKEFYSEEGIVG----FVKYLNKGKDVITDVVYISGEKNGINVEIAF 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ ++ + + +L +AN+I TI+GGTH+ G +A LTR +N GKK VK K +SG +
Sbjct: 262 QFTNEDF-ENLLAFANNIHTIEGGTHVSGFRAGLTRAINEYGKKH--VK-KFTPISGSDI 317
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT ++SV+VP P+FEGQTKT+L N +V+ VV+ V +LE HP I+ K
Sbjct: 318 REGLTAVLSVKVPEPQFEGQTKTKLTNSDVKTVVESLVYNNFLRWLEEHPSEAQRIIEKC 377
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A+KA A+RAR+LV++K+ + S +LPGKLADCSS EE E+FIVEG+SAGGSAKQ
Sbjct: 378 LLAMKAREMARRARELVKRKAEI-SLTLPGKLADCSSKNVEERELFIVEGESAGGSAKQA 436
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQA+LP+RGKI+NVE+ KNEEI+ + A+G G+ G+DF +RY KIII
Sbjct: 437 RDRRFQAVLPIRGKIINVEKAGMLRALKNEEIKAIASAIGGGI-GKDFDLSKVRYGKIII 495
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ +PPLY+V++G +V Y Y + EL+ V
Sbjct: 496 MTDADVDGAHIRTLLLTFFYRYMRPLIEAGMVYIALPPLYRVKKGDKVYYVYSEKELRDV 555
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+QRFKGLGEM P QLWET +NP+ R L ++ IEDA A +F LMG
Sbjct: 556 LKKIGKA---EVQRFKGLGEMNPEQLWETAMNPKTRKLVKVTIEDALIAEKMFRILMGEN 612
Query: 601 VDTRKELIQNAANLV-NLD 618
VD RKE I N A V NLD
Sbjct: 613 VDERKEFILNHAKEVKNLD 631
>gi|402833234|ref|ZP_10881854.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
gi|402281226|gb|EJU29917.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
Length = 690
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/621 (51%), Positives = 434/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I+V + DNS++V DNGRGIP+D+H
Sbjct: 84 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDVTIEKDNSITVVDNGRGIPVDMHE- 142
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ K A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG +
Sbjct: 143 SGKPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTSMDVEVKRDGKIHSI 200
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G LT + ++ GT++ F PD ++FT Q+ +T+ R+RELAFLN
Sbjct: 201 RFEQGVTAAPLTV----IGETEKTGTKVHFVPDPEIFTVT-QYSFDTLKHRLRELAFLNQ 255
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+TI L + + + Y F+ GG+ +V+ LN K+ +H + F D +++A
Sbjct: 256 GITIRLMDKRGEGREESY---FYEGGIRSFVEHLNRKKEVIHPTPIYFNGIKDDTVVEIA 312
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSGE
Sbjct: 313 MQY-NDSYMENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARKQGILKDKDGNLSGED 371
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD V E LTEY E +P + ++ K
Sbjct: 372 VREGLTCVISLKIHEPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVIEK 431
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQ
Sbjct: 432 AIMASRAREAARKARELTRRKNALEVSSLPGKLADCSIKDPEQAEIYLVEGDSAGGSAKQ 491
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ +DF RY KII
Sbjct: 492 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-DDFDIAKRRYGKII 550
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-K 538
I+TDADVDG+HIRTLLLTFFYRY K L + G +Y+ PPLY++ +GK+ Y Y D EL +
Sbjct: 551 IMTDADVDGSHIRTLLLTFFYRYMKPLIERGHVYIAQPPLYQIRKGKKHWYTYSDDELAQ 610
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ NA ++QR+KGLGEM P QLWETT++PE R + Q+ +EDA EA+ +F+ LMG
Sbjct: 611 KLNEVGRDNA--TVQRYKGLGEMNPEQLWETTMDPEGRTMLQVRMEDAEEADELFTILMG 668
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A V NLD
Sbjct: 669 DKVEPRRQFIEEHAKHVRNLD 689
>gi|410672047|ref|YP_006924418.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
gi|409171175|gb|AFV25050.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
Length = 634
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 437/621 (70%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AG+ + I+V + + +V+V DNGRGIP+ P
Sbjct: 27 MYIGSVDGRGLHHLVYEVVDNSIDEALAGFCTEIDVTINEEGTVTVQDNGRGIPVGNLPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+T+LHAGGKF S+ Y VSGGLHGVG+SVVNALSE LE V RDG Y+Q
Sbjct: 87 YNKSALEVVMTILHAGGKFDKST--YKVSGGLHGVGVSVVNALSEWLEAEVKRDGKLYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP ++ + + GT+I F PD +F T +F ++T+ R+RELAFLN
Sbjct: 145 RYERGKP----HDDIMEIGESEGTGTKITFKPDPLIFETT-KFVYDTLVTRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I++ D E+ Q + + GG+ +V++LN + LH+ + F ++ +G +++A
Sbjct: 200 GIKISI--SDLRIEQPQQEVFQYEGGIVSFVKYLNHSRNVLHESPIYFEREKEGTVVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LTR N +++K K +D LSGE
Sbjct: 258 MQY-TDSYAEYVYSFANNINTHEGGTHLVGFKAALTRVANDYIRQNKMAKGED-KLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ P+FEGQTKT+LGN +V+ +V+ V E L+EY+E +P V ++IL K
Sbjct: 316 IREGLTAIISVKITEPQFEGQTKTKLGNSDVKGIVESMVSEGLSEYMEENPKVANAILQK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+K+ L S+LPGKLADCS P EI++VEGDSAGGSAKQ
Sbjct: 376 ALDAQRAREAAKKARELTRRKNALDISTLPGKLADCSEKDPSLCEIYLVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILP RGKILNVE+ A + KN E+ +LI A+G G+ G+D+ + RYHK+I
Sbjct: 436 GRNRRFQAILPFRGKILNVEKARLAKVLKNNEVLSLITAMGTGI-GDDYNLDKARYHKVI 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK- 538
I+TDADVDGAHIRTL+LT F+R+ K L D G IY+ PPLY+V +GK Y Y D EL+
Sbjct: 495 IMTDADVDGAHIRTLILTLFFRHMKPLIDAGYIYIAQPPLYRVAKGKAEYYVYSDRELQA 554
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K++ N IQR+KGLGEM P QLWETT+NPE R L ++ ++DA A+ +FS LMG
Sbjct: 555 KLQELGDKNV--GIQRYKGLGEMNPEQLWETTMNPETRTLLRVTMDDAIAADEMFSILMG 612
Query: 599 ARVDTRKELI-QNAANLVNLD 618
V+ R+ I +A ++VNLD
Sbjct: 613 DEVEPRRNFITTHARDVVNLD 633
>gi|298675298|ref|YP_003727048.1| DNA gyrase subunit B [Methanohalobium evestigatum Z-7303]
gi|298288286|gb|ADI74252.1| DNA gyrase, B subunit [Methanohalobium evestigatum Z-7303]
Length = 634
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 438/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AGY S I L +D SV++ D+GRGIP+D H
Sbjct: 27 MYIGSVDSRGLHHLVYEVVDNSIDEALAGYCSEINTILNSDGSVTLEDDGRGIPVDTHAK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+T+LHAGGKF +S Y VSGGLHGVG+SVVN LSE L+V V RD Y+Q
Sbjct: 87 YNKSALEVVMTLLHAGGKFDKNS--YKVSGGLHGVGVSVVNGLSEWLDVEVKRDDKRYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P T + + + GT+ F PD ++F + +FD+++++ R+RELAFLN
Sbjct: 145 HYEKGYPKTEVQV----LGESEGNGTKFTFKPDSEIFEST-EFDYDSLSTRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ++ E S E+ Q + + + GG+ +V+ LN ++ P+H+ + F + DG ++++
Sbjct: 200 GIKITIKDERS--EEGQEDVFQYDGGIVSFVKHLNKNRSPIHEEPIYFEGESDGTIVEIS 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + +AN+I T +GGTH+ G K +LTR N +K++ ++ ++ L+GE
Sbjct: 258 LQY-TDSYGEYVYSFANNINTHEGGTHVIGFKTALTRVANDYIRKNE-IEKGNVRLTGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IIS ++P+P+FEGQTKTRLGN +V+ VV+ V E L+ YLE +P + +SI+ K
Sbjct: 316 IREGLTAIISAKIPDPQFEGQTKTRLGNSDVKGVVESLVTEELSRYLEENPKIANSIIKK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+LSA +A AAKRAR+L R+KS L S+LPGKLADCS T P SEIF+VEGDSAGGSAK
Sbjct: 376 ALSAKRAREAAKRARELTRRKSALEVSTLPGKLADCSETDPSVSEIFLVEGDSAGGSAKM 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILP RGKI+NVE+ + + KN EI +LI A+G G+ GEDF RYHK+I
Sbjct: 436 GRDRRFQAILPFRGKIINVEKARLSKVLKNNEILSLITAMGTGI-GEDFDINKARYHKVI 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFF+RY + D G +Y+ PPLY++++GK+ Y + + E K
Sbjct: 495 IMTDADVDGAHIRTLILTFFFRYMNEMVDNGYVYIAQPPLYRIKKGKKEFYIHTEKE-KN 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
K SIQR+KGLGEM P QLW TT+NPE R L Q+ +EDAA A+ +FS LMG
Sbjct: 554 AKLKELGEKGVSIQRYKGLGEMNPEQLWATTMNPESRKLTQVTMEDAAAADEMFSILMGE 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R++ I+ +A +VNLD
Sbjct: 614 EVEPRRQFIEKHATEVVNLD 633
>gi|260887491|ref|ZP_05898754.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|330837873|ref|YP_004412453.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|260862778|gb|EEX77278.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|329745637|gb|AEB98993.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
Length = 690
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 318/621 (51%), Positives = 434/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I+V + DNS++V DNGRGIP+D+H
Sbjct: 84 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDVTIEKDNSITVVDNGRGIPVDMHE- 142
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ K A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG +
Sbjct: 143 SGKPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTSMDVEVKRDGKIHSI 200
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G LT + ++ GT++ F PD ++FT Q+ +T+ R+RELAFLN
Sbjct: 201 RFEQGVTAAPLTV----IGETEKTGTKVHFVPDPEIFTVT-QYSFDTLKHRLRELAFLNQ 255
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+TI L + + + Y F+ GG+ +V+ LN K+ +H + F D +++A
Sbjct: 256 GITIRLVDKRGEGREESY---FYEGGIRSFVEHLNRKKEVIHPTPIYFNGIKDDTVVEIA 312
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSGE
Sbjct: 313 MQY-NDSYMENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARKQGILKDKDGNLSGED 371
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD V E LTEY E +P + ++ K
Sbjct: 372 VREGLTCVISLKIHEPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVIEK 431
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQ
Sbjct: 432 AIMASRAREAARKARELTRRKNALEVSSLPGKLADCSIKDPEQAEIYLVEGDSAGGSAKQ 491
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ +DF RY KII
Sbjct: 492 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-DDFDIAKRRYGKII 550
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-K 538
I+TDADVDG+HIRTLLLTFFYRY K L + G +Y+ PPLY++ +GK+ Y Y D EL +
Sbjct: 551 IMTDADVDGSHIRTLLLTFFYRYMKPLIERGHVYIAQPPLYQIRKGKKHWYTYSDDELAQ 610
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ NA ++QR+KGLGEM P QLWETT++PE R + Q+ +EDA EA+ +F+ LMG
Sbjct: 611 KLNEVGRDNA--TVQRYKGLGEMNPEQLWETTMDPEGRTMLQVRMEDAEEADELFTILMG 668
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A V NLD
Sbjct: 669 DKVEPRRQFIEEHAKHVRNLD 689
>gi|304315545|ref|YP_003850690.1| DNA gyrase subunit beta [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777047|gb|ADL67606.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 633
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 434/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSVSV D+GRGIP D+HP
Sbjct: 27 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVVIHKDNSVSVIDDGRGIPTDIHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLSVVNALS+ LEV V ++G Y Q
Sbjct: 87 TGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKRLEVIVKQNGKVYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P + L + D GT I F PD ++F T +++D++ ++ R+REL+FLN
Sbjct: 145 KYERGVPKSDLKI----IGDTDETGTTITFAPDDEIFET-LEYDYDILSQRLRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E E + + + GG+ E+V++LN +K+ LH + + D +++A
Sbjct: 200 GVRIRLMDERDGKE----DVFHYEGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD D +L GE
Sbjct: 256 MQY-NDSYTENIFSFANNIDTREGGTHLIGFKAALTKVINDYARKFNIIKDNDKNLQGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K
Sbjct: 315 VREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ SA +A AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK
Sbjct: 375 ATSAARAREAARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKM 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R+QAILPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++
Sbjct: 435 GRDSRYQAILPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+E+ K+V Y Y D EL
Sbjct: 494 IMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKIEKNKKVYYAYSDKELDN 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ Y++QR+KGLGEM QLW+TT++PE+R + ++ ++DA A+ +F+ LMG
Sbjct: 554 ILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPEKRTMLKVSLDDAIAADEIFTILMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 613 KVEPRREFIEKYAKTVRNLD 632
>gi|385799929|ref|YP_005836333.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309389293|gb|ADO77173.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 638
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 305/615 (49%), Positives = 425/615 (69%), Gaps = 13/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLV+E++DN++DE AG I+V + ++V D GRGIP D H
Sbjct: 30 MYIGSTGIKGLHHLVWEVVDNSIDEFLAGNGDQIKVTIHQGEEITVEDFGRGIPADTHQE 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A++ VLT LHAGGKF SS Y VSGGLHGVG+SVVNALS LE+T +G +Y Q
Sbjct: 90 TGLPAVQVVLTTLHAGGKFNNSS--YKVSGGLHGVGVSVVNALSSELEITTHWEGHKYQQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G PV L + +R GT IRF PD ++FT A +F +A R++E A+LN
Sbjct: 148 HYKKGAPVDKLK----KIGKTERSGTIIRFKPDSEIFT-AREFKFENLAHRLQESAYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+LT++LR D E+ E+ + GG++ +V++LN D+ ++ D++ F D +++A
Sbjct: 203 ELTLSLR--DERGEEVVEKEFQYDGGIKAFVEFLNKDRNIINNDIIYFESKPDDYEVEIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + YAN+I TIDGG H+ G K +LTR +N+ K + + K SL+G+
Sbjct: 261 VQY-NDGYNERIFSYANNINTIDGGYHLTGFKTALTRAVNNFAKNNNKLPAKISSLNGKD 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T +I+V++P P+FEGQTKT+LGN E+R +V+ V +YL+ Y + +PD+ I+ K
Sbjct: 320 VREGITAVINVKLPEPQFEGQTKTKLGNSEIRSIVESEVYQYLSLYFDTNPDLAKKIIDK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A++A A+K+AR+L ++K+ L S+SLPGKLADCSS EESE+FIVEGDSAGGSAKQ
Sbjct: 380 AVQAVRARKASKKARELTKRKTALSSNSLPGKLADCSSKKSEESELFIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R+FQAILPL+GKILNVER + N E+ +I ALG G+ GEDF E LRYHKI+
Sbjct: 440 GRERKFQAILPLKGKILNVERARLDKILNNNEVAAIITALGAGI-GEDFNLEKLRYHKIV 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TL+LT FYRY L + G IY+ PPLYKV + K+ Y Y D L+
Sbjct: 499 IMTDADVDGAHIATLILTLFYRYMPELIENGHIYLAKPPLYKVTKRKKSHYLYSDQALET 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ N+ +S+QR+KGLGEM P QLW TT++P+ R+L+++ I+D EA+ +F+ LMG+
Sbjct: 559 FRKE-NENSSFSLQRYKGLGEMNPEQLWATTMDPQNRVLQKVEIDDKIEADDIFTRLMGS 617
Query: 600 RVDTRKELIQNAANL 614
RKE I N A L
Sbjct: 618 NASLRKEFIFNNAEL 632
>gi|357058348|ref|ZP_09119202.1| B subunit [Selenomonas infelix ATCC 43532]
gi|355374201|gb|EHG21502.1| B subunit [Selenomonas infelix ATCC 43532]
Length = 684
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 427/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY N+EV + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEVVIHRDNSITVTDNGRGIPVDMHE- 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG +
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSEMDVQVRRDGKIHAI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 SFTRG--VTQEKLH--EIGASETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L E + E+ + + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLVDERGEAERRE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P + +L K
Sbjct: 366 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|126697571|ref|YP_001086468.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|254977347|ref|ZP_05273819.1| DNA gyrase subunit B [Clostridium difficile QCD-66c26]
gi|255094677|ref|ZP_05324155.1| DNA gyrase subunit B [Clostridium difficile CIP 107932]
gi|255102904|ref|ZP_05331881.1| DNA gyrase subunit B [Clostridium difficile QCD-63q42]
gi|255308724|ref|ZP_05352895.1| DNA gyrase subunit B [Clostridium difficile ATCC 43255]
gi|255316431|ref|ZP_05358014.1| DNA gyrase subunit B [Clostridium difficile QCD-76w55]
gi|255519091|ref|ZP_05386767.1| DNA gyrase subunit B [Clostridium difficile QCD-97b34]
gi|255652274|ref|ZP_05399176.1| DNA gyrase subunit B [Clostridium difficile QCD-37x79]
gi|260681774|ref|YP_003213059.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|306521988|ref|ZP_07408335.1| DNA gyrase, B subunit [Clostridium difficile QCD-32g58]
gi|384359324|ref|YP_006197176.1| DNA gyrase subunit B [Clostridium difficile BI1]
gi|423088743|ref|ZP_17077117.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
gi|115249008|emb|CAJ66819.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|260207937|emb|CBA60049.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|357559149|gb|EHJ40609.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
Length = 633
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 428/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST PRGLHHLVYE++DN++DEA GY S+I V++ D SV V DNGRGIP+++HP
Sbjct: 25 MYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYVSINEDGSVLVKDNGRGIPVEIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT LHAGGKFGG S LHGVG+SVVNALS+ + V+ +G Y Q
Sbjct: 85 TGKSTLETVLTNLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSKWMVAEVYLNGKIYKQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P + L V +GT I+F PD+ +F I+F + T+ R+REL+FLN
Sbjct: 143 TYEKGLPTSKLEV----VGESQDKGTMIQFMPDETIFD-EIEFKYETLEYRLRELSFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ED + + E+ + GGL EY+++LN + +HD +V K VD ++LA
Sbjct: 198 GIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNKSRTGIHDDIVYIDKKVDDCFVELA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT+T+N K++K +K+ D++L GE
Sbjct: 256 MQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALTKTVNDYAKRNKFLKENDVNLLGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P P+FEGQTKT+LGN +R +VD + L +LE +P I+ K
Sbjct: 315 IREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVDSVTVDELGSFLEENPSTARIIVDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KSVL S+SLPGKLADC+ P +SEIF+VEGDSAGGSAKQ
Sbjct: 375 ALRAQRAREAAKKARELTRRKSVLESTSLPGKLADCAEKDPSKSEIFLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + ++EI+N+I A G G+ GEDF + RYHKII
Sbjct: 435 GRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNMITAYGCGI-GEDFDIDKARYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L DEG +Y PPLYKV + K+ Y Y D EL
Sbjct: 494 IMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAAQPPLYKVTKQKKEHYVYSDKELNI 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ N + +QR+KGLGEM QLWETT+NPE R L Q+ +EDAA A+ VFS LMG
Sbjct: 554 LLDEIGRNGV-ELQRYKGLGEMNAEQLWETTMNPETRTLLQVTVEDAAIADEVFSMLMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V RKE I+ A V NLD
Sbjct: 613 KVAPRKEFIEENARFVRNLD 632
>gi|257062759|ref|YP_003142431.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
gi|256790412|gb|ACV21082.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
Length = 648
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/629 (50%), Positives = 426/629 (67%), Gaps = 16/629 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DNAVDEA AGY + I+V + DNS++V DNGRGIP++ HP
Sbjct: 29 MYIGSTGTRGLHHLVYEVVDNAVDEALAGYCTKIDVIIHEDNSITVIDNGRGIPVEKHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E VLT+LHAGGKFGG GY VSGGLHGVG+S VNALS LEV V RDG +Y
Sbjct: 89 EKIPTVEVVLTILHAGGKFGGE--GYKVSGGLHGVGVSCVNALSTRLEVEVCRDGKKYGI 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+SRGK V L + + GT + FWPD ++FT + +D+ T+ R RE+AFLN
Sbjct: 147 AFSRGKTVEKLH----QIGTSKTTGTTVTFWPDPEIFTDTLVYDYETLQERFREMAFLNK 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
L I L E D E N +E F + GG+ ++V++LN K+ L+ + F + T+++
Sbjct: 203 GLRIELTDERQQDEEGNFKHETFKYDGGIVDFVKYLNQGKETLNKPIYFEAENADGTVEV 262
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+QW + ++ ++ +AN+I T +GGTH++G K +LTRT+N + +K+KD +L+G+
Sbjct: 263 VMQWSTSYGTNGIMAFANNINTHEGGTHLDGFKNALTRTINDYARSKGLLKEKDKNLTGD 322
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGL IISV++ +P+FEGQTKT+LGN E+R +V +V + L+EYLE +P I+
Sbjct: 323 DAREGLAAIISVKLHDPQFEGQTKTKLGNVEIRGLVQGAVTKGLSEYLEENPTPAKRIVG 382
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ ALKA AA++AR++ R+K VL S S+PGKLADCSS P SE+FIVEGDSAGGSAK
Sbjct: 383 KASQALKAREAARKAREMTRRKGVLDSFSMPGKLADCSSREPALSEMFIVEGDSAGGSAK 442
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDR++QAILPLRGKILNVER ++ I +LI A+G + G+D+ + RYH+I
Sbjct: 443 QARDRKYQAILPLRGKILNVERAGLHRALSSDTISSLITAIGTNI-GDDYNGDNARYHRI 501
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-----GKQVQYCYD 533
II+TDADVDGAHIR LLLTFFYRY L + G IY+ PPLY +++ GK ++Y Y+
Sbjct: 502 IIMTDADVDGAHIRCLLLTFFYRYMPDLINRGYIYIAQPPLYGLKKKNSASGKILKYIYN 561
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D ++ + Y IQR+KGLGEM P QLWETT+ PE R L Q+ IEDAA A
Sbjct: 562 DEAKDQIMAQLEDPDKYDIQRYKGLGEMDPEQLWETTMEPETRTLIQVSIEDAAAAERAV 621
Query: 594 SSLMGARVDTRKELIQNAANLVNLDHLDI 622
S LMG V+ RKE IQ N +++ LDI
Sbjct: 622 SDLMGDDVEPRKEFIQK--NALDVRFLDI 648
>gi|390933679|ref|YP_006391184.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569180|gb|AFK85585.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 633
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 433/620 (69%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSVSV D+GRGIP D+HP
Sbjct: 27 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVIIHKDNSVSVIDDGRGIPTDIHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLSVVNALS+ LEV V ++G Y Q
Sbjct: 87 TGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKKLEVIVKQNGKVYQQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T LT + D GT I F PD ++F T +++D++ ++ R+REL+FLN
Sbjct: 145 KYERGVPKTDLTV----IGETDETGTTITFSPDGEIFET-LEYDYDVLSQRLRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E E + + + GG+ E+V++LN +K+ LH + + D +++A
Sbjct: 200 GVKIRLVDERDGKE----DVFHYEGGVVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GGTH+ G K +LT+ +N +K +K+ D +L GE
Sbjct: 256 MQY-NDTYTENIFSFANNIDTREGGTHLIGFKTALTKVINDYARKFNIIKENDKNLQGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K
Sbjct: 315 VREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ SA +A AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK
Sbjct: 375 ATSAARAREAARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKM 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R+QAILPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++
Sbjct: 435 GRDSRYQAILPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYR+ + L + G IY+ PPLYK+E+ K+V Y Y D EL
Sbjct: 494 IMTDADVDGSHIRTLLLTFFYRFMRPLIENGNIYIAQPPLYKIEKNKKVYYAYSDKELDN 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ Y++QR+KGLGEM QLW+TT++PE+R + ++ ++DA A+ +F+ LMG
Sbjct: 554 ILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPEKRTMLKVSLDDAIAADEIFTILMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 613 KVEPRREFIEKYAKTVRNLD 632
>gi|219851686|ref|YP_002466118.1| DNA gyrase subunit B [Methanosphaerula palustris E1-9c]
gi|219545945|gb|ACL16395.1| DNA gyrase, B subunit [Methanosphaerula palustris E1-9c]
Length = 665
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/650 (48%), Positives = 438/650 (67%), Gaps = 42/650 (6%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNAVDEA AG+ I + + D S +V DNGRGIP+D
Sbjct: 25 MYIGSTDTRGLHHLVYEVVDNAVDEALAGFCDLISITINRDGSCTVDDNGRGIPVDKMQK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALETVLT+LHAGGKF ++ Y VSGGLHGVG+SVVNALS SL V+RDG Y
Sbjct: 85 NGKSALETVLTILHAGGKFDKNT--YQVSGGLHGVGVSVVNALSVSLVADVFRDGNRYRM 142
Query: 121 KYSRGKPVTTLTCHV-------------------LPVDSKDR---------QGTRIRFWP 152
++++GK V+ L+ H V++K+ GT I F P
Sbjct: 143 EFAQGKVVSPLSVHKETLSELLERYRRRYRSEPPREVETKEALFADEGAKLSGTIITFQP 202
Query: 153 DKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQ 212
D +F T + FD++ + R+RE+AFLN +TI + +D +E+ + GGL E+VQ
Sbjct: 203 DDSIFET-VTFDYDVLVHRLREMAFLNRGITIRI----TDLRSGDKDEFHYDGGLREFVQ 257
Query: 213 WLNTDKKPLH-DVVGF-RKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 269
+L ++ LH DV+ RKD + + +++ALQ+ + +Y++T+ + NS+ T +GGTH+EG
Sbjct: 258 YLIDGREVLHPDVIDLSRKDEENKLEVEVALQY-TQSYTETVYTFVNSVNTREGGTHLEG 316
Query: 270 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 329
++++TR +N+ +K+ +K+ ++L GE VREGLT +IS+++ NP+FEGQTK RLGN
Sbjct: 317 FRSAITRAINNSARKANLIKNNTLTLRGEDVREGLTAVISIKLANPQFEGQTKMRLGNSN 376
Query: 330 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 389
VR +VD V + L+EY E +P + +I K+ A +A AA+ AR+L R+KS L SS LP
Sbjct: 377 VRGIVDSLVYQSLSEYFEENPKSIAAIFEKATVAAQAREAARNARELARRKSTLESSGLP 436
Query: 390 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 449
GKLADCS P +SE++IVEGDSAGGSAKQGR+RRFQAILPLRGKILNVE+ + M K+
Sbjct: 437 GKLADCSERDPAKSEVYIVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKATQHKMIKS 496
Query: 450 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 509
EIQ LI A+G G+ G+ RYH I+++TDADVDGAHI+TLLLTFFYRY L +
Sbjct: 497 VEIQVLISAIGAGI-GDRMDANRARYHHIVLMTDADVDGAHIQTLLLTFFYRYMPELIER 555
Query: 510 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 569
G +Y+ PPL+++ +GKQV+Y Y + E++++ + F + ++QR+KGLGEM QLWET
Sbjct: 556 GYVYIAQPPLFRIAKGKQVRYVYREEEMQQISAEFGDKGV-TVQRYKGLGEMNADQLWET 614
Query: 570 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 618
T+NP+ R+LKQ+ IEDA AN +F LMG V RK I ++A + NLD
Sbjct: 615 TMNPDTRVLKQIRIEDAGYANEIFEKLMGEDVSARKNFILRHAKEVTNLD 664
>gi|423082996|ref|ZP_17071578.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
gi|423086520|ref|ZP_17074925.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357546724|gb|EHJ28633.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357547075|gb|EHJ28974.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
Length = 633
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 428/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST PRGLHHLVYE++DN++DEA GY S+I V++ D SV V DNGRGIP+++HP
Sbjct: 25 MYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYVSINEDGSVLVKDNGRGIPVEIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT LHAGGKFGG S LHGVG+SVVNALS+ + V+ +G Y Q
Sbjct: 85 TGKSTLETVLTNLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSKWMVAEVYLNGKIYKQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P + L V +GT I+F PD+ +F I+F + T+ R+REL+FLN
Sbjct: 143 TYEKGLPTSKLEV----VGESQDKGTMIQFMPDETIFD-EIEFKYETLEYRLRELSFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ED + + E+ + GGL EY+++LN + +HD +V K VD ++LA
Sbjct: 198 GIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNKSRTGIHDDIVYIDKKVDDCFVELA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT+T+N K++K +K+ D++L GE
Sbjct: 256 MQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALTKTVNDYAKRNKFLKENDVNLLGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P P+FEGQTKT+LGN +R +VD + L +LE +P I+ K
Sbjct: 315 IREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVDSVTVDELGSFLEENPATARIIVDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KSVL S+SLPGKLADC+ P +SEIF+VEGDSAGGSAKQ
Sbjct: 375 ALRAQRAREAAKKARELTRRKSVLESTSLPGKLADCAEKDPSKSEIFLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + ++EI+N+I A G G+ GEDF + RYHKII
Sbjct: 435 GRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNMITAYGCGI-GEDFDIDKARYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L DEG +Y PPLYKV + K+ Y Y D EL
Sbjct: 494 IMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAAQPPLYKVTKQKKEHYVYSDKELNI 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ N + +QR+KGLGEM QLWETT+NPE R L Q+ +EDAA A+ VFS LMG
Sbjct: 554 LLDEIGRNGV-ELQRYKGLGEMNAEQLWETTMNPETRTLLQVTVEDAAIADEVFSMLMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V RKE I+ A V NLD
Sbjct: 613 KVAPRKEFIEENARFVRNLD 632
>gi|169335585|ref|ZP_02862778.1| hypothetical protein ANASTE_02000 [Anaerofustis stercorihominis DSM
17244]
gi|169258323|gb|EDS72289.1| DNA gyrase, B subunit [Anaerofustis stercorihominis DSM 17244]
Length = 636
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 437/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYEI+DN+VDEA AG+ NI V + ++++V D+GRGIP ++
Sbjct: 28 MYIGSTGEKGLHHLVYEIVDNSVDEALAGFCKNIVVTIGEGDTITVEDDGRGIPTGMNEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSA+E LT+LHAGGKF S Y VSGGLHGVG+SVVNALSE L V V+++G Y Q
Sbjct: 88 YKKSAVEIALTMLHAGGKF--DSGTYKVSGGLHGVGVSVVNALSEHLTVNVYQNGQVYEQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP+T L V R GT + F PD ++F+ + F+++T+ RIRELAFLN
Sbjct: 146 KYERGKPITGLEV----VGKTKRTGTTVFFKPDGEIFSELV-FNYDTLKHRIRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L+ D+ K+Q + + GG+ E+V + N K+ L +V+ F K+ D +++A
Sbjct: 201 GLNITLK--DTREGKDQEESFHYEGGIIEFVDYANRGKEKLTPEVIYFEKESDVCMLEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S +YS+++ +AN+I T++GG H+ G K +LTR++N+ +K +KD + +LSG+
Sbjct: 259 MQF-STSYSESIYSFANNINTVEGGMHVNGFKTALTRSINAYARKYNILKDNEENLSGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL +ISV++ +PEFEGQTKT+LGNPEVR VD +V + ++ YLE HP V I+ K
Sbjct: 318 IREGLCVVISVKLADPEFEGQTKTKLGNPEVRGYVDTTVGDNISSYLEEHPPVAKIIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L+A +A AA++A+DLVR+KSVL S++LPGKLADC P + EI+IVEGDSAGGSAK
Sbjct: 378 ALTAQRARKAARKAKDLVRRKSVLESTALPGKLADCREKDPSKCEIYIVEGDSAGGSAKL 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+ + QAILPLRGKILNVE+ + + I+++I A G G+ E+F E RYHKI+
Sbjct: 438 GRNSKTQAILPLRGKILNVEKARLDRILNTDTIRSMITAFGTGIS-EEFNIEKARYHKIV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLYK+E+ K+V Y Y D +L++
Sbjct: 497 IMTDADVDGAHIRTLLLTFFYRYMRGLIDAGYVYIAQPPLYKLEKQKKVWYLYSDEQLEE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +QR+KGLGEM QLW+TT+NPE R L Q+ I+DAA A+ +FS LMG
Sbjct: 557 KLQEIGRDKI-GLQRYKGLGEMNGEQLWDTTMNPENRTLLQVSIDDAAYADEIFSILMGD 615
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V RK+ I +NA + NLD
Sbjct: 616 QVQPRKDFITENARKVQNLD 635
>gi|292669300|ref|ZP_06602726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
gi|292649141|gb|EFF67113.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
Length = 685
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/620 (52%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY N+EV + DNS++V DNGRGIP+D+H
Sbjct: 78 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEVVIHKDNSITVTDNGRGIPVDMH-E 136
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG Y
Sbjct: 137 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEI 194
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 195 SFTRG--VTVNKLHEIGI--SETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNH 249
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L D E+ + + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 250 GITITLV--DERGEEERRETFHFEGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 307
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 308 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKDKDGNLSGED 366
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P + +L K
Sbjct: 367 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEK 426
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 427 GLMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 486
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 487 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKII 545
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 546 IMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAK 605
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 606 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGD 664
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 665 KVEPRRQFIEENARLVRNLD 684
>gi|374709302|ref|ZP_09713736.1| DNA gyrase subunit B [Sporolactobacillus inulinus CASD]
Length = 639
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 312/619 (50%), Positives = 431/619 (69%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG +GLHHLV+EI+DN++DEA AGY S+I+V + + ++V D+GRGIP+DL
Sbjct: 31 MYIGTTGEKGLHHLVWEIVDNSIDEALAGYCSHIQVIIEKEGGITVMDDGRGIPVDLQKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS + V V+R+G Y+Q
Sbjct: 91 VGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKMWVKVYRNGHVYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP+ L + ++ GT F PD ++F FD++T+ R+RELAFLN
Sbjct: 149 EYHRGKPLADLKI----IGDSEQTGTTTHFEPDPEIFKDTTTFDYDTLRVRVRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I++ ED E+ + + Y + GG+ YV++LN K+ +H+ + + DGI +++A+
Sbjct: 205 NIRISI--EDRR-EEGKRDTYHYEGGIRSYVEFLNRSKEVIHEPIDLEGEKDGIKVEIAM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ S ++ + +AN+I T +GGTH G K +LTR +N +K++ +K D +L+G+ V
Sbjct: 262 QYNS-GFTGQLYSFANNIHTHEGGTHEYGFKVALTRVINDYARKNQLIKASDPNLTGDDV 320
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+S++ P+P+FEGQTKT+LGN EVR + D E + YL +PDV I+ K
Sbjct: 321 REGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAITDTLFSEAFSRYLLENPDVARLIVDKG 380
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A AAK+AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQG
Sbjct: 381 LIASRARTAAKKARELTRRKSSLEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQG 440
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ G++F E RYHKIII
Sbjct: 441 RDRMFQAILPLRGKILNVEKARLDRILSNAEIRAMITALGTGI-GDEFNLEKARYHKIII 499
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL++V+ GK + Y YDD +LK++
Sbjct: 500 MTDADVDGAHIRTLLLTFFYRFMRPLLENGYVYIAQPPLFRVQYGKTLLYAYDDNDLKRI 559
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+S+ P N ++QR+KGLGEM P QLWETT++PE R++ Q+ +EDA EA+ F LMG R
Sbjct: 560 QSNLPQNVKPALQRYKGLGEMNPEQLWETTMDPENRLVLQVNLEDAIEADQTFEMLMGDR 619
Query: 601 VDTRKELIQ-NAANLVNLD 618
V+ R++ IQ NA NLD
Sbjct: 620 VEPRRDFIQKNAVYAQNLD 638
>gi|333895870|ref|YP_004469744.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111135|gb|AEF16072.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 633
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 435/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSVSV D+GRGIP D+HP
Sbjct: 27 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVIIHKDNSVSVIDDGRGIPTDIHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLSVVNALS++LEV V ++G Y Q
Sbjct: 87 TGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKNLEVIVKQNGKVYQQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T LT + D GT I F PD ++F T +++D++ ++ R+REL+FLN
Sbjct: 145 KYERGVPKTDLTV----IGETDETGTTITFSPDGEIFET-LEYDYDVLSQRLRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E E + + + GG+ E+V++LN +K+ LH + + D +++A
Sbjct: 200 GVKIRLVDERDGKE----DVFHYEGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + +AN+I T +GGTH+ G K +LT+ +N +K +K+ D +L GE
Sbjct: 256 MQY-NDSYTENIFSFANNIDTREGGTHLIGFKTALTKVINDYARKFNIIKENDKNLQGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K
Sbjct: 315 VREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ SA +A AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK
Sbjct: 375 ATSAARAREAARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKM 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD ++QAILPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++
Sbjct: 435 GRDSKYQAILPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYR+ + L + G IY+ PPLYK+E+ K+V Y Y D EL
Sbjct: 494 IMTDADVDGSHIRTLLLTFFYRFMRPLIENGNIYIAQPPLYKIEKNKKVYYAYSDKELDN 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ Y++QR+KGLGEM QLW+TT++PE+R + ++ ++DA A+ +F+ LMG
Sbjct: 554 ILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPEKRTMLKVSLDDAIAADEIFTILMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 613 KVEPRREFIEKYAKTVRNLD 632
>gi|193215259|ref|YP_001996458.1| DNA gyrase subunit B [Chloroherpeton thalassium ATCC 35110]
gi|193088736|gb|ACF14011.1| DNA gyrase, B subunit [Chloroherpeton thalassium ATCC 35110]
Length = 644
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 310/618 (50%), Positives = 418/618 (67%), Gaps = 15/618 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYEI+DN+VDEA GY I V + ++ S+ V D GRGIP D+HP
Sbjct: 34 MYIGDVGVRGLHHLVYEIVDNSVDEALGGYNDYIFVQIKSNGSILVRDKGRGIPTDIHPQ 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N SAL+ V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+R+G + Q
Sbjct: 94 KNTSALQLVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYREGKIFFQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P ++ + + GT+ F PD+ +F +F ++T+A R+RELA+LN
Sbjct: 152 GYEKGIPKAPVSV----IGTTSENGTKTTFLPDESIFKNR-EFRYDTLADRMRELAYLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLA 239
LTI + D + +E+ F GG++E+V ++++ + K + + + F + DG +++A
Sbjct: 207 NLTIVI----EDERDGRRDEFHFKGGIQEFVTFMDSTRLKLIKEPIYFEGEKDGTVVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D+Y + Y N+I T +GGTH+ G + +LTRTLN G+K+ K+ ISL+GE
Sbjct: 263 FQY-NDSYQENAFSYVNNINTHEGGTHVTGFRKALTRTLNYYGQKNDLFKNLKISLTGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT I+SV+VP P+FEGQTKT+LGN E + +V+ V E L EY+E HP+ + IL K
Sbjct: 322 FREGLTAILSVKVPEPQFEGQTKTKLGNSETQSIVESIVNEKLAEYIEQHPNEVKIILEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA A AA++A+DL R+KS L SSSLPGKLADCS PE E++IVEGDSAGGSAKQ
Sbjct: 382 VVSAAIARDAARKAKDLTRRKSALESSSLPGKLADCSINDPEHCELYIVEGDSAGGSAKQ 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPL+GKILNVE+ M +NEEI+ LI ALG + ++F LRY KII
Sbjct: 442 GRDRRFQAILPLKGKILNVEKARLNKMLENEEIRTLIMALGTSIGEDEFDASRLRYGKII 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFF+RY + L + G +++ PPLY ++ GKQ Y +DD E
Sbjct: 502 LMTDADVDGAHIRTLLLTFFFRYMRGLVEGGRVFIAQPPLYLIKSGKQQWYAWDDDERDD 561
Query: 540 VKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ F Y IQR+KGLGEM QLW TT++PE+R L + IE+A EA+ +FS+LM
Sbjct: 562 ILKQFEVKGKENYGIQRYKGLGEMNADQLWSTTMDPEKRTLLMVTIENAMEADKIFSTLM 621
Query: 598 GARVDTRKELIQNAANLV 615
G +V+ R+ I+ A V
Sbjct: 622 GDQVEPRRAFIETNAKYV 639
>gi|336252328|ref|YP_004595435.1| DNA gyrase subunit B [Halopiger xanaduensis SH-6]
gi|335336317|gb|AEH35556.1| DNA gyrase, B subunit [Halopiger xanaduensis SH-6]
Length = 646
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 303/618 (49%), Positives = 425/618 (68%), Gaps = 12/618 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVSIHEDGSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G+PV + V ++ + GT +RFWPD +F A +F +T+A R+RELAFLN
Sbjct: 145 AFEQGEPVGDME-RVRDMEPDEETGTEVRFWPDTGIFE-AGEFSFSTLANRLRELAFLNS 202
Query: 181 KLTIALRKE-----DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGI 234
+ I LR E D+D E Y + GG+ E+V++LN + +HD V+ F + I
Sbjct: 203 GVRITLRDEREDAGDADEEGPVEETYEYEGGIREFVEYLNETRSAMHDDVIYFEDEEQNI 262
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +
Sbjct: 263 QVEVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENSMLSDLDNN 321
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E +PD +
Sbjct: 322 LKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEENPDTAE 381
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I++K++ A KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAG
Sbjct: 382 AIINKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAG 441
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQ R+ FQA+LP+RGK+LNVE+ + +N++I+N+I A+G GV G++F E +R
Sbjct: 442 GSAKQARNPEFQAVLPIRGKVLNVEKHRLDRVLENDQIRNIITAIGAGV-GDEFDLEDVR 500
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y K+I+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + D
Sbjct: 501 YKKVIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTD 560
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
E ++ + +QRFKGLGEM P QLW+TT++P R+LKQ+ +EDAA A+ +FS
Sbjct: 561 QERDEIIEEKCDGSPSQVQRFKGLGEMNPQQLWDTTMDPSNRILKQITVEDAAAADKMFS 620
Query: 595 SLMGARVDTRKELIQNAA 612
LMG V+ RK+ I+ A
Sbjct: 621 VLMGDAVEPRKQFIKENA 638
>gi|326486756|gb|ADZ76421.1| DNA gyrase subunit B [Bacillus subtilis]
Length = 588
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 304/598 (50%), Positives = 416/598 (69%), Gaps = 11/598 (1%)
Query: 4 GSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNK 63
GST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ +H +
Sbjct: 1 GSTSSKGLHHLVWEIVDNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEKMGR 60
Query: 64 SALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYS 123
A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y
Sbjct: 61 PAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYK 118
Query: 124 RGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 183
RG PVT L + D GT F PD ++F+ ++D++ +A R+RELAFL +
Sbjct: 119 RGVPVTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTKGVN 174
Query: 184 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQW 242
I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+
Sbjct: 175 ITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY 232
Query: 243 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 302
+D+Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VRE
Sbjct: 233 -NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVRE 291
Query: 303 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 362
GLT IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L
Sbjct: 292 GLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLM 351
Query: 363 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 422
A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRD
Sbjct: 352 AARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRD 411
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 482
R FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+T
Sbjct: 412 RHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMT 470
Query: 483 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 542
DADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++
Sbjct: 471 DADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLK 530
Query: 543 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ P +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +
Sbjct: 531 TLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDK 588
>gi|404486886|ref|ZP_11022074.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
gi|404335940|gb|EJZ62406.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
Length = 651
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 312/629 (49%), Positives = 435/629 (69%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGYA++IEV + DNS+ V DNGRGIP+D+H
Sbjct: 30 MYIGDIGVKGLHHLVYEVVDNSIDEALAGYATHIEVYINEDNSIRVVDNGRGIPVDMHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS L + R+G Y Q
Sbjct: 90 EHKSALEVVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTYLRAEIRRNGKIYMQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS GKP+ + + + GT I F PD +F+ + +D+N +A R+R+LA+LN
Sbjct: 148 EYSCGKPLHDVEI----IGETEETGTTIIFRPDDSIFSVTV-YDYNILANRLRDLAYLNA 202
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T++L + + + +Y E F++ GL+E+V++++++K+ L DV+ + G+ ++
Sbjct: 203 GITLSLTDKRTTNDAGEYRKEVFYSKEGLKEFVRYIDSNKEHLIDDVIHIATERQGVPVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + Y++ + Y N+I TI+GGTH+ G + LTRTL + SK ++ + +S
Sbjct: 263 VAMTY-NTTYNENVYSYVNNINTIEGGTHLTGFRRGLTRTLKKYAEDSKMLEKVKVEISS 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L YLE HP +I+
Sbjct: 322 DDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVIGAVDTAVSEALANYLEEHPAQAKTIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS L LPGKLADCSS PE+ EIF+VEGDSAGGSA
Sbjct: 382 EKVIIAATARHAARKAREMVQRKSPLSGGGLPGKLADCSSRNPEDCEIFLVEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGRDR FQAILPLRGKILNVE+ + +++++EI N+ +ALG+ + E+ KEA L
Sbjct: 442 KQGRDRMFQAILPLRGKILNVEKAMDHKVFESQEISNMFKALGVTIGTEEDSKEANIEKL 501
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV--ERGKQVQYC 531
RYHKIII+TDADVDGAHI TLLLTFF+R + L ++G +Y+ PPLYK +RGK +YC
Sbjct: 502 RYHKIIIMTDADVDGAHIATLLLTFFFRRMRPLLEQGYVYLATPPLYKCKSKRGKTEEYC 561
Query: 532 YDDAELKK--VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+ D + + +K + L QR+KGLGEM P QLWETT++PE R+LKQ+ I++AAEA
Sbjct: 562 WTDQQKDQFCLKYCEGNEQLMETQRYKGLGEMNPHQLWETTMDPENRILKQVTIDNAAEA 621
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS LMG V R+E I++ A N+D
Sbjct: 622 DRVFSMLMGEDVGPRREFIESNATYANID 650
>gi|433653751|ref|YP_007297459.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291940|gb|AGB17762.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 633
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 434/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSVSV D+GRGIP D+HP
Sbjct: 27 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIDVIIHKDNSVSVIDDGRGIPTDIHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +E LTVLHAGGKF ++ Y VSGGLHGVGLSVVNALS+ LEV V ++G Y Q
Sbjct: 87 TGKSGVEVALTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKRLEVIVKQNGKVYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P + L + D GT IRF PD ++F T +++D++ ++ R+REL+FLN
Sbjct: 145 KYERGVPKSELKI----IGDTDETGTMIRFKPDDEIFET-LEYDYDVLSQRLRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E E + + + GG+ E+V++LN +K+ LH + + D +++A
Sbjct: 200 GVRIRLMDERDGKE----DVFHYEGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD D +L GE
Sbjct: 256 MQY-NDSYTENIFSFANNIDTREGGTHLIGFKAALTKVINDYARKFNIIKDNDKNLQGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K
Sbjct: 315 VREGLTAIISVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ SA +A AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK
Sbjct: 375 ATSAARAREAARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKM 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R+QAILPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++
Sbjct: 435 GRDSRYQAILPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+E+ K+V Y Y D EL
Sbjct: 494 IMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKIEKNKKVYYAYSDKELDN 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ Y++QR+KGLGEM QLW+TT++P +R + ++ ++DA A+ +F+ LMG
Sbjct: 554 ILKEIGREN-YNVQRYKGLGEMDAEQLWDTTMDPGKRTMLKVSLDDAIAADEIFTILMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 613 KVEPRREFIEKYAKTVRNLD 632
>gi|340751288|ref|ZP_08688109.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
gi|229421601|gb|EEO36648.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
Length = 635
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/621 (50%), Positives = 427/621 (68%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY ++IEV++L DN + V DNGRGIP+D+HP
Sbjct: 25 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCTHIEVSILPDNVIEVVDNGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALS EV V ++G ++Q
Sbjct: 85 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSLWTEVEVRKNGKVWYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY+RG P V + + GT +RF D ++F T + +D+NT+ R++ELA+LN
Sbjct: 143 KYNRGIPEEA----VKEIGITEEHGTTVRFKADHEIFETLV-YDYNTLKNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-KKPLHDVVGFRKDVDGITIDLA 239
L I L +P K + E F GG+ ++++ + D +K + + + +VD I +++A
Sbjct: 198 GLVITLTDSRKEPFKKEIFE--FEGGIADFLREITEDTEKLIKEPIYMTGEVDNIGVEIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + S+ + + N+I T +GGTH++G + +LTR +N +GK +KDKD L G
Sbjct: 256 FLYTVNQ-SEIIYSFVNNINTHEGGTHVQGFRTALTRIINDVGKAQGLLKDKDGKLQGTD 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T I+SV+VP P+FEGQTKT+LGN EV +V V L LE +P+ I+ K
Sbjct: 315 IREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVSTVVGGQLKMILEDNPNDTKVIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA+RAR+LV +KS L SLPGKLADCSS PEE EI+IVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQRARELVLRKSALEVGSLPGKLADCSSKNPEECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ +N E++ +I A G G+ G++F E LRY KII
Sbjct: 435 GRDRYHQAILPLRGKILNVEKAGLHKALENNEVRAMITAFGTGI-GDNFNIEKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTF YRY L G +++ PPLYK+ GKQ++Y Y D ELK+
Sbjct: 494 LMTDADVDGAHIRTLLLTFIYRYMIELIYNGNVFIAQPPLYKISYGKQIKYAYSDRELKE 553
Query: 540 VKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +F + Y++QR+KGLGEM P QLWETT++P+ R L ++ I+DA A+++F LMG
Sbjct: 554 ITEAFEGEDKKYTLQRYKGLGEMNPEQLWETTMDPQNRTLLKVTIDDARAADMLFDKLMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+VD R+E I +NA + NLD
Sbjct: 614 DKVDPRREFIEENAEYVKNLD 634
>gi|407796859|ref|ZP_11143810.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
gi|407018757|gb|EKE31478.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
Length = 643
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 427/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+ +I+V + DNS++V DNGRGIP+ +
Sbjct: 33 MYIGSTNEKGLHHLVWEIVDNSIDEAMAGHCDHIQVVIEEDNSITVMDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALS+ LEV V RDG YHQ
Sbjct: 93 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSDYLEVHVHRDGKLYHQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G P V +D+ D+ GT+I F PD ++F ++D T+ R+RELAFLN
Sbjct: 151 DFRHGVP----QKDVEEIDTTDKTGTQIHFKPDPEIFKEGQEYDFETLTTRLRELAFLNR 206
Query: 181 KLTIALRKEDSDPEK-NQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
LTI + ED E N E+++ GG+ YV+ LN+ ++ LH+ + + DGI+I+LA
Sbjct: 207 GLTITV--EDKREEHGNGKKEFYYEGGIISYVEHLNSSREVLHEPIYAEAEQDGISIELA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D ++ + YAN+I T +GGTH G K LTR +N +K+ ++ D +L+G+
Sbjct: 265 LQY-NDGFASNIYSYANNIHTYEGGTHESGFKTGLTRVINDYARKNSMFRENDPNLTGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R V D E +++L +P+V I+ K
Sbjct: 324 VREGLTVIISIKHPDPQFEGQTKTKLGNSEARTVTDALFSENFSKFLLENPNVAKIIVEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKL+DC+S P ESE++IVEGDSAGGSAKQ
Sbjct: 384 GLMASRARMAAKKARELTRRKSALEISNLPGKLSDCASKDPSESELYIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I ALG GV GE+F RYHK++
Sbjct: 444 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRTMITALGSGV-GEEFDVSKARYHKVV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLY++++ K+ Y + D EL++
Sbjct: 503 IMTDADVDGAHIRTLLLTFFYRYMRPLLEDGYVYIAQPPLYQIKQNKKEYYTFSDQELEE 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P+ IQR+KGLGEM P QLWETT+NPE R + Q+ +EDA A+ FS LMG
Sbjct: 563 KLAEIPATPKPVIQRYKGLGEMNPEQLWETTMNPEGRTMLQVTLEDAIGADETFSMLMGD 622
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ IQ NA + NLD
Sbjct: 623 AVEPRRNFIQENARYVQNLD 642
>gi|251794042|ref|YP_003008773.1| DNA gyrase subunit beta [Paenibacillus sp. JDR-2]
gi|247541668|gb|ACS98686.1| DNA gyrase, B subunit [Paenibacillus sp. JDR-2]
Length = 635
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 427/620 (68%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY + I+V + DNS++V DNGRGIP+ +
Sbjct: 27 MYIGSTSGKGLHHLVWEVVDNSIDEALAGYCTKIQVRVHEDNSITVIDNGRGIPVGENAK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE + VTV G Y Q
Sbjct: 87 LKKSTLEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHVTVTVKLHGNVYQQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D GT ++F PD ++FT +++ T+ RIRELAFLN
Sbjct: 145 EYRRGVP----QYDVKIIGESDETGTTVKFKPDPEIFTDTTVYEYETLQSRIRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L D N + + GG+ E+V+ LN +K+ +H+ + D I ++++
Sbjct: 201 GLEIEL----IDERTGTSNSFKYDGGIIEFVKHLNRNKEVMHEEPIYVEGSKDHIQVEVS 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD D + SG+
Sbjct: 257 LQY-NDGYTENIHSFANNINTHEGGTHESGFKSALTRIINDYARKTGLIKDNDSNFSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V I+ K
Sbjct: 316 VREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESFFAEKLQEFLDENPSVSRKIVEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 376 GLQAARAREAARKARELTRRKSALEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVER + N EI+ +I ALG G+ G+DF RYHK+I
Sbjct: 436 GRDRHFQAILPLRGKILNVERARLDRILGNAEIRAIITALGTGI-GDDFDLAKARYHKVI 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFF+RY + + + G IY+ PPL+K+ER K ++Y + E ++
Sbjct: 495 IMTDADVDGAHIRTLMLTFFFRYMRKIIEAGYIYIAQPPLFKIERNKVIRYAQSEKEREE 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + F A ++QR+KGLGEM QLWETT++PE R + Q+ IEDA EA+V+F +LMG
Sbjct: 555 IIAEFGEGAKVNVQRYKGLGEMNATQLWETTMDPESRTMLQVSIEDAIEADVIFDTLMGD 614
Query: 600 RVDTRKELIQN-AANLVNLD 618
V+ R++ IQ A ++ NLD
Sbjct: 615 NVEPRRDFIQQFAKDVKNLD 634
>gi|295111747|emb|CBL28497.1| DNA gyrase subunit B [Synergistetes bacterium SGP1]
Length = 644
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/617 (52%), Positives = 422/617 (68%), Gaps = 21/617 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TGPRGLHHLV E++DN++DEA AG+ + I+V + D SV+V D+GRGIP D HP+
Sbjct: 35 MYIGDTGPRGLHHLVNEVVDNSIDEAMAGFCTRIDVTIHKDESVTVQDDGRGIPTDPHPS 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ E VLT LHAGGKF YSVSGGLHGVG+S VNALSE EVT+ R+GME Q
Sbjct: 95 NGRPTCEVVLTRLHAGGKF--EQGAYSVSGGLHGVGVSAVNALSEWFEVTIARNGMERTQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG PVT L+ V PVD QGTRI + PDK++F + T+ R ELAFLN
Sbjct: 153 RFERGVPVTDLSEGV-PVDW---QGTRIHYLPDKEIFED-VHHSLETLKSRFMELAFLNA 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I + +D ++ EY F GG+ +VQ+LN D+ L + G R D I +
Sbjct: 208 GVRIFV----TDERSSESREYHFEGGVSAFVQYLNRDRTTLFAPPVVISGERND---IKV 260
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
D+ALQ+ +D Y + +L YAN I T++GGTH+ G++ +LTR LN + K + DK+ +L+
Sbjct: 261 DMALQY-NDEYQERILTYANLIHTVEGGTHLMGLRQALTRALNEAARSGKLLNDKEDNLT 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ ++EGLTC++SV++ P+FEGQTKT+LGN +VR VD V E L +E PD++ I
Sbjct: 320 GDDLKEGLTCVLSVKLVEPQFEGQTKTKLGNSDVRGAVDSVVYEGLLSVIEERPDIVRPI 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AAK+A++LVR K + +LPGKLADCSS TPE SEI+IVEGDSAGGS
Sbjct: 380 VDKALRARRAREAAKKAKELVR-KGAMTGMNLPGKLADCSSKTPENSEIYIVEGDSAGGS 438
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ RDR FQAILPLRGKILNVE+ E M +N EIQ +I ALG G+ G +F LRYH
Sbjct: 439 AKQARDRTFQAILPLRGKILNVEKAQEHKMLQNREIQTIITALGCGI-GTEFNATRLRYH 497
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHI TLLLTFFYR+ L EG IY+ PPLY+V+RGKQV YCY + E
Sbjct: 498 KIIIMTDADVDGAHISTLLLTFFYRHMPELLTEGYIYLAQPPLYRVQRGKQVHYCYTEKE 557
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ P +QR+KGLGEM P QLW TT++P R+LK++ ++D A+ F L
Sbjct: 558 LRQHVDGAPDPDKVGVQRYKGLGEMNPEQLWMTTMDPANRILKKVELDDDLLADEYFDIL 617
Query: 597 MGARVDTRKELIQNAAN 613
MG RV+ R+E I AN
Sbjct: 618 MGERVEPRREFITTNAN 634
>gi|189462935|ref|ZP_03011720.1| hypothetical protein BACCOP_03637 [Bacteroides coprocola DSM 17136]
gi|189430362|gb|EDU99346.1| DNA gyrase, B subunit [Bacteroides coprocola DSM 17136]
Length = 654
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 313/629 (49%), Positives = 421/629 (66%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G + Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTNVFRNGKIHQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+ GKP+ V V + D GTR FWPD +FTT ++ +N + R+RELA+LN
Sbjct: 151 EYACGKPLYA----VKEVGTTDITGTRQTFWPDGSIFTTT-EYKYNILQARMRELAYLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L + E + + F G++E+V++LN+ PL DV+ + GI I+
Sbjct: 206 GITITLTDKREKEEDGSFKQEIFHSEEGVKEFVRFLNSTNTPLIDDVIYLNTEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
A+ + + + + + Y N+I TI+GGTH G + +LTR L ++SK ++ + +SG
Sbjct: 266 CAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTRVLKKYAEESKALEKAKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP +I+
Sbjct: 325 EDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A +AA++AR+ V++KS + LPGKLADCSS T EE E+F+VEGDSAGGSA
Sbjct: 385 DKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCSSRTAEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKG-EDFKK---E 471
KQGR R+FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV G ED KK +
Sbjct: 445 KQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGVDGTEDSKKANID 504
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
LRYHK+II+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YC
Sbjct: 505 KLRYHKVIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIANPPLYKCSKGKISEYC 564
Query: 532 YDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y D E + + I QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA
Sbjct: 565 YTDEERQAFMQKYGDGTETGIHTQRYKGLGEMNPEQLWETTMNPETRILKQVSIENAAEA 624
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 625 DYIFSMLMGDDVAPRREFIEKHATYANID 653
>gi|423310102|ref|ZP_17288086.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
gi|392682742|gb|EIY76084.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
Length = 653
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 306/629 (48%), Positives = 437/629 (69%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGNISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS G P+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN
Sbjct: 151 EYSCGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNA 205
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKP-LHDVVGFRKDVDGITID 237
+ I+L D E N E F++ GL+E+V+++++ ++ ++DV+ + G ++
Sbjct: 206 GIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSSREHFMNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G
Sbjct: 266 VAIMY-NTSYNENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E LT YLE HP I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALTYYLEEHPKEAKLIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY KIII+TDADVDG+HI TL++T F+RY + +GC+Y+ PPLY +GK +YC+
Sbjct: 505 LRYKKIIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGCLYIATPPLYLCTKGKAKEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R++ I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|384455130|ref|YP_005667723.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417968034|ref|ZP_12609081.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|418015417|ref|ZP_12654982.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418371928|ref|ZP_12964026.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|345505752|gb|EGX28046.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346983471|dbj|BAK79147.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380340308|gb|EIA28918.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|380343027|gb|EIA31447.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 639
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/625 (51%), Positives = 432/625 (69%), Gaps = 22/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYEI+DN++DEA AG+ I + + DNS+ + DNGRGIP+ HP
Sbjct: 29 MYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITINDDNSILIVDNGRGIPVGEHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVVNALSE V V R G Y Q
Sbjct: 89 LKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVVNALSERCYVKVSRSGHVYFQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPV + V + + GT F PDK++FT ++D + ++ R+RELAFLN
Sbjct: 147 EYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTETTEYDFDVLSQRLRELAFLNA 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
+ I L +D N E+F++GG+ E+++ +N KK L DV+ F + + + +A
Sbjct: 203 GIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKALFEDVIFFEHSKNDLNLQIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV----KDKDISL 295
+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N KK + KD+ SL
Sbjct: 259 IQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVNDYAKKFNYIKESNKDEIKSL 317
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD +E+L +P++
Sbjct: 318 IGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVDNIFFNCFSEFLNENPNIGKI 377
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I K++ A KA AAK+AR+ R KSVL ++LPGKLADCSS PEE EI+IVEGDSAGG
Sbjct: 378 ICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADCSSKNPEECEIYIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR+FQAILPL GKI+NVE++ + +E I+ +I A G G+ G+DF + +RY
Sbjct: 437 SAKQGRDRKFQAILPLSGKIMNVEKQRIFKILSSETIRCMITAFGCGI-GQDFDVDKIRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
++II++TDADVDG+HIRTLLLTF YRY + ++G +Y+ PPLYKV GK+ YCY +
Sbjct: 496 NRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLYKVSEGKKEFYCYTEE 555
Query: 536 ELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL K+K +N + IQR+KGLGEM PVQLWETT+NPE R L ++ IE A+ A+ +FS
Sbjct: 556 ELNLKLKEINKNNLV--IQRYKGLGEMNPVQLWETTMNPESRTLLRVTIEHASYADEIFS 613
Query: 595 SLMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+ NLD
Sbjct: 614 ILMGDKVEPRREFIQNNAKNVKNLD 638
>gi|422344230|ref|ZP_16425156.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
gi|355377549|gb|EHG24766.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
Length = 684
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 424/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY N+EV + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEVVIHKDNSITVTDNGRGIPVDMH-E 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG Y
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG V L + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 SFTRGVTVNKLH----EIGTSETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L D E+ + + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLV--DERGEEERRETFHFEGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N + +KDKD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARCLSVLKDKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P + +L K
Sbjct: 366 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 GLMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|220927465|ref|YP_002504374.1| DNA gyrase subunit beta [Clostridium cellulolyticum H10]
gi|219997793|gb|ACL74394.1| DNA gyrase, B subunit [Clostridium cellulolyticum H10]
Length = 642
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/623 (51%), Positives = 433/623 (69%), Gaps = 16/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N++DEA AG I+V + DNSV+V DNG GIP+ +HP
Sbjct: 30 MYIGSTSSRGLHHLVYEIVANSIDEALAGRCDIIKVIVHKDNSVTVTDNGSGIPVGIHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE V T+LHAGGKFG S YSVSGGLHGVG SVVNALSES+EV V R+G Y Q
Sbjct: 90 MGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGASVVNALSESMEVEVKREGHIYRQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKP+T++ V D GT F PD ++F I +D + + R RE+AFLN
Sbjct: 148 KYSRGKPLTSVDI----VGDTDETGTITTFKPDPEIFE-EIVYDFDAMISRYREMAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L D PE++ + GG+ +V++LN K+PLHD V+ D +++A
Sbjct: 203 GINIKLI--DERPEESVEKNLHYEGGIISFVEYLNKSKEPLHDEVIYLEGSRDANIVEVA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++++ YAN+I T +GGTH+ G +A++T+ LN +K +K+ D +LSGE
Sbjct: 261 MQY-NDSYNESVFTYANNIATTEGGTHLTGFRAAITKVLNDYARKFNILKENDKNLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV++P P+FEGQTKT+LGN E+R +V+ V + L +LE HP V IL K
Sbjct: 320 VREGLTAVLSVKLPEPQFEGQTKTKLGNSEIRTLVENVVSDKLFIFLEEHPAVAKIILDK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S++A +A AA++AR+L R+KS + SS+LPGKLADCS P ++EIFIVEGDSAGGSAKQ
Sbjct: 380 SITAARAREAARKARELTRRKSAMDSSTLPGKLADCSEKDPTKTEIFIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+ QAILPL GK+LNVE+ +Y NE++ +I ALG G+ G++F LRY KII
Sbjct: 440 GRDRKIQAILPLWGKMLNVEKSRMDKVYDNEKLSPVIIALGAGI-GDEFDTSKLRYDKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDG+HIR LLLTFF+RY + L ++G +Y+ +PPL+KV +GK+ Y YDD EL K
Sbjct: 499 IMADADVDGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPLFKVYKGKEEYYAYDDIELDK 558
Query: 540 V---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ + + +IQRFKGLGEM P QLWETT+NPE R + ++ +EDA A+ VF
Sbjct: 559 IFKERGWRKDDPNVNIQRFKGLGEMNPDQLWETTMNPETRTIIKVDLEDAISADEVFCKF 618
Query: 597 MGARVDTRKELIQ-NAANLVNLD 618
MG +V+ R+E IQ +A ++ NLD
Sbjct: 619 MGDKVEPRREYIQMHARDVSNLD 641
>gi|212637854|ref|YP_002314374.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
gi|212559334|gb|ACJ32389.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
Length = 640
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 433/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AG+ + I V + DNS++V DNGRGIP+ +H
Sbjct: 31 MYIGSTGPKGLHHLVWEIVDNSIDEALAGFCTEINVIVEEDNSITVIDNGRGIPVGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEELEVYVHRDGNIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P + L V DR GT I F PD ++FT ++D++T+A R+RELAFLN
Sbjct: 149 KYKRGVPCSDLQV----VGETDRTGTTIHFKPDPEIFTETTEYDYDTLAHRLRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L ED E N+ NEY++ GG+ YV+ LN K+ LH+ + + DGI +++A
Sbjct: 205 GIRITL--EDRRGE-NRRNEYYYEGGISSYVKHLNRTKETLHEEPIYIEGEKDGIQVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y+ + +AN+I T +GGTH G K +LTR +N G+K+ KD+D +L+GE
Sbjct: 262 LQY-NDGYTSNIYSFANNIHTHEGGTHELGFKTALTRIINDYGRKNNMFKDQDANLTGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV+ P P+FEGQTKT+LGN + R + E ++L +P V I+ K
Sbjct: 321 VREGLTAIISVKHPAPQFEGQTKTKLGNSDARTATESIFAEQFEKFLLENPSVAKKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR+L R+K+ L SSLPGKLADCSS P E+++VEGDSAGGSAKQ
Sbjct: 381 GILASRARLAAKRARELTRRKNALEVSSLPGKLADCSSRDPAICELYVVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKII
Sbjct: 441 GRDRHFQAILPLRGKIINVEKSRLDKILSNNEVRAIITALGTGI-GEDFDITKARYHKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYK+++GK+++Y Y D +L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMREVIEQGYVYIAQPPLYKIQQGKRIEYAYSDRQLEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P IQR+KGLGEM P QLWETT+NPE R L ++ ++DA EA+ F LMG
Sbjct: 560 ILTRLPEQPKPVIQRYKGLGEMNPEQLWETTMNPETRTLLKVSLQDAMEADETFEILMGD 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA + NLD
Sbjct: 620 KVEPRRQFIEENAKYVKNLD 639
>gi|296452676|ref|ZP_06894367.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296880071|ref|ZP_06904040.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
gi|296258458|gb|EFH05362.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296428938|gb|EFH14816.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
Length = 633
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 428/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST PRGLHHLVYE++DN++DEA GY S+I V++ D SV V DNGRGIP+++HP
Sbjct: 25 MYIGSTSPRGLHHLVYEVVDNSIDEALQGYCSDIYVSINEDGSVLVKDNGRGIPVEIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT LHAGGKFGG S LHGVG+SVVNALS+ + V+ +G Y Q
Sbjct: 85 TGKSTLETVLTNLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSKWMVAEVYLNGKIYKQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P + L V +GT I+F PD+ +F I+F + T+ R+REL+FLN
Sbjct: 143 TYEKGLPTSKLEV----VGESHDKGTMIQFMPDETIFD-EIEFKYETLEYRLRELSFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ED + + E+ + GGL EY+++LN + +HD +V K VD ++LA
Sbjct: 198 GIKIVF--EDKREGQEKRKEFHYTGGLVEYIKYLNKSRTGIHDDIVYIDKKVDDCFVELA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GG+H+ G KA+LT+T+N K++K +K+ D++L GE
Sbjct: 256 MQY-TDGYTENIYSFANNINTHEGGSHLSGFKAALTKTVNDYAKRNKFLKENDVNLLGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P P+FEGQTKT+LGN +R +VD + L +LE +P I+ K
Sbjct: 315 IREGLTAVVSVKLPEPQFEGQTKTKLGNSFMRGIVDSVTVDELGSFLEENPVTARIIVDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAK+AR+L R+KSVL S+SLPGKLADC+ P +SEIF+VEGDSAGGSAKQ
Sbjct: 375 ALRAQRAREAAKKARELTRRKSVLESTSLPGKLADCAEKDPAKSEIFLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + ++EI+N+I A G G+ GEDF + RYHKII
Sbjct: 435 GRDRNSQAILPLRGKILNVEKSRLDRILSSDEIKNMITAYGCGI-GEDFDIDKARYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L DEG +Y PPLYKV + K+ Y Y D EL
Sbjct: 494 IMTDADVDGAHIRTLLLTFFFRYMRPLIDEGYVYAAQPPLYKVTKQKKEHYVYSDKELNI 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ N + +QR+KGLGEM QLWETT+NPE R L Q+ +EDAA A+ VFS LMG
Sbjct: 554 LLDEIGRNGV-ELQRYKGLGEMNAEQLWETTMNPETRTLLQVTVEDAAIADEVFSMLMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V RKE I+ A V NLD
Sbjct: 613 KVAPRKEFIEENARFVRNLD 632
>gi|160891431|ref|ZP_02072434.1| hypothetical protein BACUNI_03882 [Bacteroides uniformis ATCC 8492]
gi|270295441|ref|ZP_06201642.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|423304784|ref|ZP_17282783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
gi|156858838|gb|EDO52269.1| DNA gyrase, B subunit [Bacteroides uniformis ATCC 8492]
gi|270274688|gb|EFA20549.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|392683448|gb|EIY76783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
Length = 653
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 306/629 (48%), Positives = 436/629 (69%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS G P+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN
Sbjct: 151 EYSCGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNA 205
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKP-LHDVVGFRKDVDGITID 237
+ I+L D E N E F++ GL+E+V+++++ ++ ++DV+ + G ++
Sbjct: 206 GIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSSREHFMNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G
Sbjct: 266 VAIMY-NTSYNENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E LT YLE HP I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALTYYLEEHPKEAKLIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY KIII+TDADVDG+HI TL++T F+RY + +GC+Y+ PPLY +GK +YC+
Sbjct: 505 LRYKKIIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGCLYIATPPLYLCTKGKAKEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R++ I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|433461798|ref|ZP_20419400.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
gi|432189693|gb|ELK46776.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
Length = 640
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/621 (51%), Positives = 421/621 (67%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY +IEVA+ DNS++V DNGRGIP+ +
Sbjct: 32 MYIGSTNEKGLHHLVWEIVDNSIDEAMAGYCDHIEVAIEEDNSITVTDNGRGIPVGIQEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LTVLHAGGKFGG S LHGVG SVVNALS LEV V RDG Y+Q
Sbjct: 92 TGRPAVETILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVFVHRDGNIYYQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P L + D GTRI F PD+++F+ ++ +A R+RELAFLN
Sbjct: 150 AYHRGVPADDLKV----IGETDITGTRITFKPDEEIFSETQEYKFEILANRLRELAFLNK 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDL 238
LTI + ++ D DP +Y F GG+ YV+ +N ++ LHD + D I+I++
Sbjct: 206 GLTITIDDKRTDEDPV-----QYHFEGGILSYVEHMNRTREVLHDAFFIEGEQDEISIEI 260
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D ++ + YAN+I T +GGTH G K LTR +N +K+ K+ D +L+G+
Sbjct: 261 AMQY-NDGFASNIYSYANNIHTYEGGTHESGFKTGLTRVINDYARKNNMFKETDPNLTGD 319
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IIS++ P+P+FEGQTKT+LGN E R V D E + +L +P + +I+
Sbjct: 320 DVREGLTAIISLKHPDPQFEGQTKTKLGNSEARTVTDALFSENFSRFLFENPQMAKTIVE 379
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K L A +A +AAK+AR+L R+KS L S+LPGKLADCSS + SE++IVEGDSAGGSAK
Sbjct: 380 KGLMASRARMAAKKARELTRRKSALEVSNLPGKLADCSSKDAKISELYIVEGDSAGGSAK 439
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ GEDF E RYHKI
Sbjct: 440 QGRDRHFQAILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GEDFDIEKARYHKI 498
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFFYRY + L ++G IY+ PPLYK+++GK Y Y D L
Sbjct: 499 VIMTDADVDGAHIRTLLLTFFYRYMRPLIEKGYIYIAQPPLYKIQQGKATYYTYSDKGLD 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + ++ IQR+KGLGEM P QLWETT++PE R + Q+ +EDA A+ F LMG
Sbjct: 559 SMLAQLSASPKPGIQRYKGLGEMNPEQLWETTMDPETRSMLQVNLEDAMGADETFDILMG 618
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 619 DKVEPRRNFIQENAQYVQNLD 639
>gi|404329035|ref|ZP_10969483.1| DNA gyrase subunit B [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 639
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 436/619 (70%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG +GLHHLV+E++DN++DEA AG+ +I+V + D ++V D+GRGIP+D+
Sbjct: 31 MYIGTTGEKGLHHLVWEVVDNSIDEALAGFCHHIQVFIEKDGGITVIDDGRGIPVDIQKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG VSGGLHGVG SVVNALS ++ V V+R+G Y+Q
Sbjct: 91 VGRPAVEVIMTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSTTMWVKVYRNGHIYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPV L + DR GT F PD ++F F++ T+ RIRELAFLN
Sbjct: 149 EYHRGKPVADLKI----IGDTDRTGTTTHFIPDPEIFKETTHFNYETLRVRIRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I++ ED EK++ + + GG+ EYV +LN K+ LH + + DGI +++A+
Sbjct: 205 NIRISI--EDRR-EKDKKESFHYEGGIREYVAFLNRSKEVLHQPIDLEGEQDGIKVEIAM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D ++ + +AN+I T +GGTH G K +LTR +N +K++ +K D +LSGE V
Sbjct: 262 QY-NDGFACQLYSFANNIHTHEGGTHEYGFKVALTRVINDYARKNQLMKSSDPNLSGEDV 320
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+SV+ P+P+FEGQTKT+LGNPEVR + D + +L +PD+ I+ K
Sbjct: 321 REGLTAIVSVKHPDPQFEGQTKTKLGNPEVRTITDNLFSNSFSRFLYENPDIARLIVEKG 380
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
A +A AAK+AR+L R+KS L SSSLPGKLADC+S SE++IVEGDSAGGSAKQG
Sbjct: 381 TIASRARSAAKKARELTRRKSSLESSSLPGKLADCTSRDASISELYIVEGDSAGGSAKQG 440
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR +QAILPLRGKILNVE+ + N EI+ +I ALG GV G++F+ E RYHKIII
Sbjct: 441 RDRMYQAILPLRGKILNVEKARLDKILSNAEIRAMITALGTGV-GDEFRLEKARYHKIII 499
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYR+ + L ++G IY+ PPLY+V+ GK ++Y YDD EL K+
Sbjct: 500 MTDADVDGAHIRTLLLTFFYRFMRPLLEKGYIYIAQPPLYRVQYGKTLKYAYDDKELTKI 559
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ PSN ++QR+KGLGEM P QLWETT++PE R++ ++ +EDA EA+ +F LMG R
Sbjct: 560 QGELPSNVKPALQRYKGLGEMNPEQLWETTMDPENRVVLKVHLEDAIEADQIFEMLMGDR 619
Query: 601 VDTRKELIQNAANLV-NLD 618
V+ R++ IQ A+ V NLD
Sbjct: 620 VEPRRDFIQENAHYVQNLD 638
>gi|194332868|ref|YP_002014728.1| DNA gyrase subunit B [Prosthecochloris aestuarii DSM 271]
gi|194310686|gb|ACF45081.1| DNA gyrase, B subunit [Prosthecochloris aestuarii DSM 271]
Length = 644
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 423/620 (68%), Gaps = 18/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHL+YEI+DN++DE AGY IE++L D SV+V+DNGRGIP+D+HP
Sbjct: 33 MYIGDINVRGLHHLIYEIVDNSIDETLAGYNDTIEMSLNDDGSVTVSDNGRGIPVDMHPQ 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V RDG ++Q
Sbjct: 93 KKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVSRDGKVWYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P C V + D+ GT+ F PD +F T +F + I R+RELAFLN
Sbjct: 151 RYHRGVP----QCEVKIIGETDKTGTKTTFMPDASIFKTT-EFRKDVIIDRMRELAFLNS 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I ++ D E + + GG++E+V + + ++ L + V + D +++A
Sbjct: 206 VLKIVVKDTDDSEET-----FHYEGGIKEFVTYTDHNRIALVKEPVYLYGERDTTVVEIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL+G+
Sbjct: 261 LQY-NDSYQENVFSYVNNINTHEGGTHMTGFRKALTRTLNAYAQKNDLLKNLKLSLTGDD 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+EGLT IISV+V P+FEGQTKT+LGN E + +V+ V E L E+LE +P+VL +I+ K
Sbjct: 320 FKEGLTAIISVKVAEPQFEGQTKTKLGNSETQSIVESIVNEQLAEFLESNPNVLKTIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SA + AA++A++L R+KSVL S+ LPGKLADCS PE E++IVEGDSAGGSAKQ
Sbjct: 380 VKSAALSRDAARKAKELTRRKSVLESTGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG ++F + LRY KII
Sbjct: 440 GRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTNFGEDEFMADKLRYGKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLTFF+R+ + L + G +++ PPLY ++ GK+ +Y +D+ E
Sbjct: 500 IMTDADVDGAHIRTLLLTFFFRHMRPLIEAGKVFIAQPPLYLIKAGKEQKYAWDEDERTT 559
Query: 537 -LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ +K S +IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+
Sbjct: 560 IMEMMKKSQKGKTNINIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVTVENAMEADQVFST 619
Query: 596 LMGARVDTRKELIQNAANLV 615
LMG +VD R+E I+ A V
Sbjct: 620 LMGDKVDPRREFIEKNARYV 639
>gi|302340767|ref|YP_003805973.1| DNA gyrase subunit beta [Spirochaeta smaragdinae DSM 11293]
gi|301637952|gb|ADK83379.1| DNA gyrase, B subunit [Spirochaeta smaragdinae DSM 11293]
Length = 636
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 431/622 (69%), Gaps = 15/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP GLHHLVYEI+DN++DEA AG+ I V + N + V DNGRGIP DLH
Sbjct: 25 MYIGSTGPEGLHHLVYEIVDNSIDEALAGFCDEILVVIEKGNIIRVEDNGRGIPTDLHKE 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF + Y VSGGLHGVG+SVVNALSE +V V RDG ++Q
Sbjct: 85 EGVSALEIVMTKLHAGGKFNKDT--YKVSGGLHGVGVSVVNALSEWCDVFVHRDGSIFYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P V V R GT RF PD ++F T ++F + ++ R+RELAFLN
Sbjct: 143 KYDRGNP----EKDVATVGETTRHGTITRFKPDGEIFET-VEFSFDVLSRRLRELAFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I + ED + + E+ F GG++ +V +L+ KKP+H + + F DGI ++ A
Sbjct: 198 GIRIII--EDERLPQKKTKEFQFEGGVKSFVSFLSESKKPIHKEPIYFEGIRDGIDLECA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L++ ++ YS+ + + N+I T +GGTH+ G K +LTRT N KKSK K D + SG+
Sbjct: 256 LEY-NEGYSENIFSFVNNINTREGGTHLVGFKTALTRTFNDFLKKSKFAKKMDETFSGDD 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV+VP+P+FEGQTK +LGN EVR VV+ V E+LT Y E +P +++ IL K
Sbjct: 315 VREGLTAVVSVKVPDPQFEGQTKAKLGNSEVRGVVESLVAEHLTYYFEENPKLIEKILEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AA++ARDL R+KS L SSSLPGKLADC+ P +SE++IVEGDSAGGSAKQ
Sbjct: 375 ITMAARARIAARKARDLTRRKSALESSSLPGKLADCAEKDPSKSEVYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPL GK+LNVE+ + N+++Q +I LG G G++F +RYHK+I
Sbjct: 435 GRDRQFQAILPLWGKMLNVEKTRADKVLTNDKLQPIIATLGAGA-GKEFDISKVRYHKVI 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDG+HIRTLLLTFF+RY L + G +Y+ +PPLYK++ GK + Y YD+ + +K
Sbjct: 494 IMADADVDGSHIRTLLLTFFFRYMPELVERGYVYIAMPPLYKMQLGKSITYAYDERDREK 553
Query: 540 VKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ S + +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDA EA+ +FS+LM
Sbjct: 554 IMKSLFAEETEKVAIQRYKGLGEMNPNQLWETTMDPDSRKIMQVRLEDAVEADQIFSTLM 613
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G V+ R++ I++ A +V NLD
Sbjct: 614 GEDVEPRRKFIEDNALMVSNLD 635
>gi|431792075|ref|YP_007218980.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782301|gb|AGA67584.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 644
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 313/620 (50%), Positives = 431/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY I+V + +DNS+SV DNGRGIP+D+HP
Sbjct: 36 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCDTIDVTIHSDNSISVVDNGRGIPVDIHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LTVLHAGGKF GS+ Y VSGGLHGVG+SVVNALS L V V +DG YHQ
Sbjct: 96 IGKPAVEVALTVLHAGGKFSGSA--YKVSGGLHGVGMSVVNALSTWLHVEVKKDGKVYHQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK + LT ++ + GT+I F PD ++F I F + +A R+REL+FLN
Sbjct: 154 EFMRGKTTSELT--IIGEADSGKTGTKISFAPDPEIFE-EIVFQFDILAHRLRELSFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
K+ I L E D ++ Y+ GG+ ++V+++N K+ LH + + F + DG+ +++
Sbjct: 211 KVAITLIDEREDKKE----LYYHTGGIFDFVKYINRSKEVLHPEPIYFEAEKDGVQVEIC 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + YAN+I T +GGTH G KA+LTR +N +K+K +K+ D +L+GE
Sbjct: 267 MQY-NDGYIENLFSYANNIHTQEGGTHESGFKAALTRVVNDYSRKNKILKENDANLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+VP P+FEGQTKT+LGN E+R +VD E L+ +L +P ++ K
Sbjct: 326 IREGLTVVISVKVPEPQFEGQTKTKLGNSEIRSIVDSITGEGLSVFLAENPATGKKVIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A AA++AR+L R+KS L S+LPGKLADCS E E++IVEGDSAGGSAK
Sbjct: 386 SLQASRAREAARKARELTRRKSALEVSALPGKLADCSWKEAELCEMYIVEGDSAGGSAKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILP+RGKILNVE+ + N EI+ ++ A+G G+ EDF RYHK++
Sbjct: 446 GRDRRFQAILPIRGKILNVEKARLDRILGNAEIRAMVTAMGTGI-SEDFDITKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIR LLLTFF+R+ K L + IY+ PPL+K+++GK V Y Y D EL K
Sbjct: 505 IMTDADVDGAHIRILLLTFFFRFMKPLIENNYIYIAQPPLFKIKKGKDVYYAYSDEELAK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ + + IQR+KGLGEM QLW+TT++P +R + Q+ ++DA A+ +F+ LMG
Sbjct: 565 IQDKIGRDKV-EIQRYKGLGEMNADQLWDTTMDPAKRTILQVTMDDAIRADELFTILMGD 623
Query: 600 RVDTRKELI-QNAANLVNLD 618
V+ R+E I +NA + NLD
Sbjct: 624 MVEPRREFIHENAKYVRNLD 643
>gi|373859274|ref|ZP_09602004.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
gi|372450943|gb|EHP24424.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
Length = 642
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 325/620 (52%), Positives = 431/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ S+I V + DNS++V DNGRGIP+ +
Sbjct: 33 MYIGSTSGRGLHHLVWEIVDNSIDEALAGHCSDINVIIEKDNSITVKDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E + TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG Y+Q
Sbjct: 93 VGRPAVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVYVHRDGKIYYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG P L V D GT I F PD +FT +++D++T+A R+RELAFLN
Sbjct: 151 VFERGVPQADLAV----VGETDHTGTTIHFIPDATIFTETLEYDYDTLATRLRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
+ I + ED E N+ NEY + GG++ YV+ LN K +H+ F + DGITID+A
Sbjct: 207 NIKITI--EDKRVE-NKKNEYIYEGGIKSYVEHLNRTKDVVHEEPIFIEGEKDGITIDVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +++Y+ + +AN+I T +GGTH G K +LTR +N +K+ +K+ D +LSGE
Sbjct: 264 LQY-NESYTSNIYSFANNIHTYEGGTHEFGFKTALTRVINDYARKNGLIKENDTNLSGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN EVR + D E+ ++L P V ++ K
Sbjct: 323 VREGLTAIISIKHPDPQFEGQTKTKLGNSEVRTITDTIFSEHFEKFLLEDPGVARKVVEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 383 GLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHK++
Sbjct: 443 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAMITAIGTGI-GEDFDIARARYHKVV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+++Y Y+D EL++
Sbjct: 502 IMTDADVDGAHIRTLLLTFFYRYMRQILEAGYVYIAQPPLYKVQQGKRIEYAYNDKELER 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V + P++ +IQR+KGLGEM P QLWETT++P R + Q+ +EDA EA+ F LMG
Sbjct: 562 VFAELPNSPKPNIQRYKGLGEMNPTQLWETTMDPSTRTMLQVSLEDAIEADETFEMLMGD 621
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NA + NLD
Sbjct: 622 KVEPRRNFIEANAQYVKNLD 641
>gi|393809327|gb|AFN25837.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/619 (51%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARVIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|342731691|ref|YP_004770530.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|342329146|dbj|BAK55788.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
Length = 639
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/625 (51%), Positives = 432/625 (69%), Gaps = 22/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYEI+DN++DEA AG+ I + + DNS+ + DNGRGIP+ HP
Sbjct: 29 MYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDEITITINDDNSILIVDNGRGIPVGEHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVVNALSE V V R G Y Q
Sbjct: 89 LKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVVNALSERCYVKVSRGGHVYFQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPV + V + + GT F PDK++FT ++D + ++ R+RELAFLN
Sbjct: 147 EYKRGKPVDS----VKKIGNSMYTGTETYFIPDKEIFTETTEYDFDVLSQRLRELAFLNA 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
+ I L +D N E+F++GG+ E+++ +N KK L DV+ F + + + +A
Sbjct: 203 GIKINL----NDLRFNNSEEFFYSGGIREFIKHINKGKKALFEDVIFFEHSKNDLNLQIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV----KDKDISL 295
+Q+ +D Y++ +L YAN+I T +GGTH+ G K SLTR +N KK + KD+ SL
Sbjct: 259 IQY-TDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVNDYAKKFNYIKESNKDEIKSL 317
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE +REGL C++SV++ NP+FEGQTKT+LGN EVR +VD +E+L +P++
Sbjct: 318 IGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVDNIFFNCFSEFLNENPNIGKI 377
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I K++ A KA AAK+AR+ R KSVL ++LPGKLADCSS PEE EI+IVEGDSAGG
Sbjct: 378 ICEKAIIAAKAREAAKKARETTR-KSVLDRTALPGKLADCSSKNPEECEIYIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR+FQAILPL GKI+NVE++ + +E I+ +I A G G+ G+DF + +RY
Sbjct: 437 SAKQGRDRKFQAILPLSGKIMNVEKQRIFKILSSETIRCMITAFGCGI-GQDFDVDKIRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
++II++TDADVDG+HIRTLLLTF YRY + ++G +Y+ PPLYKV GK+ YCY +
Sbjct: 496 NRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLYKVSEGKKEFYCYTEE 555
Query: 536 ELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL K+K +N + IQR+KGLGEM PVQLWETT+NPE R L ++ IE A+ A+ +FS
Sbjct: 556 ELNLKLKEINKNNLV--IQRYKGLGEMNPVQLWETTMNPESRTLLRVTIEHASYADEIFS 613
Query: 595 SLMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+ NLD
Sbjct: 614 ILMGDKVEPRREFIQNNAKNVKNLD 638
>gi|420169307|ref|ZP_14675909.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
gi|394231515|gb|EJD77142.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
Length = 643
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMMQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|375086659|ref|ZP_09733061.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
gi|291532646|emb|CBL05759.1| DNA gyrase subunit B [Megamonas hypermegale ART12/1]
gi|374564516|gb|EHR35806.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
Length = 665
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 436/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+D+H
Sbjct: 58 MYIGSTSARGLHHLVYEVVDNSIDEALAGYCTHIEVTIHKDNSITVTDNGRGIPVDMH-E 116
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ K A+E VLTVLHAGGKFGGS GY VSGGLHGVG+SVVNALS ++EV V RDG +
Sbjct: 117 SGKPAVEVVLTVLHAGGKFGGS--GYKVSGGLHGVGVSVVNALSTNMEVKVKRDGKIHEI 174
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G VT V V D GT + F PD ++F + +D++T+ R+REL+FLN
Sbjct: 175 TFEKG--VTKEPLKV--VGQTDETGTLVHFVPDAEIFDETV-YDYDTLRHRLRELSFLNR 229
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+TI L D PE+ + ++F GG+ +V+ LN +K+ ++ + V F D +++A
Sbjct: 230 GITIILT--DERPEEVRQETFYFEGGISSFVEHLNRNKEVINPEPVYFNGTKDTTVVEIA 287
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ + +YS+ + + N+I T +GGTH+ G K++LTR N ++ +K+ + +L GE
Sbjct: 288 LQYNT-SYSENIYSFVNNINTEEGGTHLAGFKSALTRAANDFARRQGIIKNNEDNLVGED 346
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLTC+IS+++ P+FEGQTKT+LGN EVR +VD V E L+EY E +P + I+ K
Sbjct: 347 IREGLTCVISIKLREPQFEGQTKTKLGNSEVRGIVDSIVSEGLSEYFEENPVISKKIIEK 406
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQ
Sbjct: 407 SIMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPEQAEIYLVEGDSAGGSAKQ 466
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I A G G+ G +F RY KII
Sbjct: 467 GRDRRFQAILPLRGKILNVEKARLDKILNNEEIRTMITAFGSGI-GSEFDITKRRYGKII 525
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLY++ +G+ Y Y D EL +
Sbjct: 526 IMTDADVDGAHIRTLLLTFFYRYMRPLIENGHVYIAQPPLYQIRKGRSHWYTYSDEELAQ 585
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + ++QR+KGLGEM P QLWETT++PE+R + Q+ + +A EA+ +F+ LMG
Sbjct: 586 KLDEIGRDGI-TVQRYKGLGEMNPEQLWETTMDPEKRTVLQVHLREAEEADSIFTILMGD 644
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+ I+ ANLV NLD
Sbjct: 645 KVEPRRRFIEEHANLVRNLD 664
>gi|374294499|ref|YP_005044690.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
gi|359823993|gb|AEV66766.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
Length = 641
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/621 (51%), Positives = 430/621 (69%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IE+ + DNS++ DNGRGIP+ +HP
Sbjct: 31 MYIGSTSSRGLHHLVYEIMDNSIDEALAGYCDEIEITINPDNSITNIDNGRGIPVGIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E V T+LHAGGKFGG GYSVSGGLHGVG SVVNALSE LEV V+R+G Y Q
Sbjct: 91 MGIPTVEVVHTILHAGGKFGGE--GYSVSGGLHGVGASVVNALSEYLEVEVYREGNIYRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK V+ L + DR GT+ F PD +F I+FD+ T+ R RELAFLN
Sbjct: 149 RYERGKVVSKLEV----IGKTDRTGTKTTFKPDPLIFE-KIEFDYETLLNRFRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI L D E+ E + GG+ +V+ LN +K+ +H + F DG +++A
Sbjct: 204 GLTIRLI--DKRKEEPVVKELHYEGGIISFVEHLNRNKEVIHQPPIYFESLKDGNHVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I T +GGTH+ G K ++T+ N +K +K+ D +L GE
Sbjct: 262 MQY-NDTYNENIYSFANNIATTEGGTHLTGFKTAITKVFNDYCRKYNYLKENDKNLLGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ P+FEGQTKT+LGN E+R +V+ +V E L+ +LE +P + +I+ K
Sbjct: 321 VREGLTAVISVKLHEPQFEGQTKTKLGNSEIRSLVENAVSEKLSAFLEENPSIAKAIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S++A +A AA++AR++ R+KS L S++LPGKLADCS P EI+IVEGDSAGGSAKQ
Sbjct: 381 SITAARAREAARKAREMTRRKSALESTTLPGKLADCSEKDPSLCEIYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPL GK+LNVE+ +Y NE++ +I ALG + GEDF E LRYHKII
Sbjct: 441 GRDRRFQAILPLWGKMLNVEKSRIDKVYTNEKLLPVITALGANI-GEDFDIEKLRYHKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDG HIRTLLLTF YRY + L + G +Y+ PPL+K+ +GK+ Y Y++ +L+K
Sbjct: 500 IMADADVDGQHIRTLLLTFLYRYMRPLVEGGYVYIAQPPLFKITKGKEEVYAYNEKQLEK 559
Query: 540 V-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +IQR+KGLGEM P QLWETT+NP+ R + ++ ++DA A+ +FS LMG
Sbjct: 560 ILNEKGWKKGECTIQRYKGLGEMNPEQLWETTMNPKTRSMLRVELKDAIAADEIFSILMG 619
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ RKE IQ NA ++ NLD
Sbjct: 620 EKVEPRKEFIQANAKDVTNLD 640
>gi|317478438|ref|ZP_07937599.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
gi|316905397|gb|EFV27190.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
Length = 653
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 306/629 (48%), Positives = 436/629 (69%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS G P+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN
Sbjct: 151 EYSCGHPLYS----VKEVGTTDITGTRQQFWPDGTIFTETV-YNYDILATRMRELAYLNA 205
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKP-LHDVVGFRKDVDGITID 237
+ I+L D E N E F++ GL+E+V+++++ ++ ++DV+ + G ++
Sbjct: 206 GIKISLTDLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSSREHFMNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G
Sbjct: 266 VAIMY-NTSYNENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E LT YLE HP I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALTYYLEEHPKEAKLIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARIAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY KIII+TDADVDG+HI TL++T F+RY + +GC+Y+ PPLY +GK +YC+
Sbjct: 505 LRYKKIIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGCLYIATPPLYLCTKGKAKEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R++ I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|299143458|ref|ZP_07036538.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517943|gb|EFI41682.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 639
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 313/623 (50%), Positives = 442/623 (70%), Gaps = 18/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AG +I V + DNSVSV+DNG GIP ++HP
Sbjct: 29 MYIGSTGSKGLHHLVYEVVDNSIDEALAGICDHILVEIYEDNSVSVSDNGSGIPTEIHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF ++ Y VSGGLHGVG+SVVNALS L V V R+G Y Q
Sbjct: 89 TGKSTVETVLTILHAGGKF--NNGAYKVSGGLHGVGVSVVNALSTELIVNVKRNGNIYEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDS--KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFL 178
K+SRG T L + V+ K+ GT+I F PD ++F T ++F+ ++ R RE+AFL
Sbjct: 147 KFSRGIAKTQL----IEVEKLKKEETGTKIFFRPDPEIFDT-VEFEFEILSKRFREMAFL 201
Query: 179 NPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITID 237
N + I D + Y + GG++ +V+++N K +H + + ++ + ++
Sbjct: 202 NKGIKIQF----IDHRIGKDETYHYEGGIKSFVEYINRKKTAIHKEIIYIDEIRENTAVE 257
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ +D+Y++ +L +AN+I T +GG+H+ G +++LTR +N G+K +K+K+ +LSG
Sbjct: 258 IALQY-TDSYTENILTFANNINTEEGGSHLSGFRSALTRCINDYGRKYNIIKEKEENLSG 316
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT +ISV++PNP+FEGQTK +LGN E R +VD SV E L+ +LE +P V +IL
Sbjct: 317 EDVREGLTGVISVKLPNPQFEGQTKAKLGNSETRGIVDSSVSENLSSFLEENPKVAKTIL 376
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
KSLSA +A AA++ARDL R+K++L S +LPGKLADC ++ E +EIF+VEGDSAGGSA
Sbjct: 377 EKSLSARRAREAARKARDLTRKKNILESMTLPGKLADCQNSDNETTEIFLVEGDSAGGSA 436
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K RD FQAILPLRGKI+NVE+ + ++EI+ +I A G G+ G +F + LRY+K
Sbjct: 437 KDARDSVFQAILPLRGKIMNVEKARLDKILNSDEIKAMITAFGTGI-GSEFSIDNLRYNK 495
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAE 536
III+TDADVDGAHI TLLLTFF+RY + L +EG +YV PPL+ + +G K ++YCYDD E
Sbjct: 496 IIIMTDADVDGAHIMTLLLTFFFRYMRPLIEEGHVYVAQPPLFGILKGTKALRYCYDDRE 555
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L++ + + + I+R+KGLGEM P LWETT+NP+ R+L ++ I+DA EA+ FS L
Sbjct: 556 LQRALNELGRDKKFDIKRYKGLGEMNPEDLWETTMNPDHRILLKVEIKDAIEADETFSML 615
Query: 597 MGARVDTRKELIQ-NAANLVNLD 618
MG+ V+ R++ IQ NA + N+D
Sbjct: 616 MGSEVEPRRDFIQENALFVENID 638
>gi|27466922|ref|NP_763559.1| DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57865927|ref|YP_190090.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251811368|ref|ZP_04825841.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|282874725|ref|ZP_06283604.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|293367576|ref|ZP_06614229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417647460|ref|ZP_12297298.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|417656803|ref|ZP_12306482.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|417659128|ref|ZP_12308738.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|417909208|ref|ZP_12552947.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|417911948|ref|ZP_12555645.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|417912698|ref|ZP_12556384.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|418325276|ref|ZP_12936483.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|418604519|ref|ZP_13167866.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|418608801|ref|ZP_13171981.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|418612386|ref|ZP_13175430.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|418617359|ref|ZP_13180257.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|418621984|ref|ZP_13184746.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|418624284|ref|ZP_13186961.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|418626542|ref|ZP_13189140.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|418664988|ref|ZP_13226448.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|419769996|ref|ZP_14296084.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|420172895|ref|ZP_14679392.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|420181842|ref|ZP_14688001.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|420186258|ref|ZP_14692330.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|420188871|ref|ZP_14694872.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|420194332|ref|ZP_14700147.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|420197594|ref|ZP_14703317.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|420207785|ref|ZP_14713271.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|420215373|ref|ZP_14720642.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|420216527|ref|ZP_14721734.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|420222776|ref|ZP_14727691.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|420224635|ref|ZP_14729475.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|420227733|ref|ZP_14732497.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|420230696|ref|ZP_14735375.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|420233032|ref|ZP_14737654.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|421608632|ref|ZP_16049848.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
gi|38604835|sp|Q8CQK4.1|GYRB_STAES RecName: Full=DNA gyrase subunit B
gi|81819302|sp|Q5HK03.1|GYRB_STAEQ RecName: Full=DNA gyrase subunit B
gi|27314464|gb|AAO03601.1|AE016744_4 DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57636585|gb|AAW53373.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251805117|gb|EES57774.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|281296441|gb|EFA88956.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|291318289|gb|EFE58682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329724157|gb|EGG60675.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|329735731|gb|EGG72012.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|329736056|gb|EGG72329.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|341651705|gb|EGS75502.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|341653799|gb|EGS77565.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|341657190|gb|EGS80883.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|365228525|gb|EHM69706.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|374404742|gb|EHQ75710.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|374409769|gb|EHQ80544.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|374409806|gb|EHQ80580.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|374818652|gb|EHR82802.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|374819688|gb|EHR83808.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|374828008|gb|EHR91858.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|374828054|gb|EHR91901.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|374831612|gb|EHR95349.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|383357678|gb|EID35145.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|394241161|gb|EJD86579.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|394250949|gb|EJD96080.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|394252623|gb|EJD97652.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|394253830|gb|EJD98820.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|394264909|gb|EJE09577.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|394265695|gb|EJE10346.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|394275018|gb|EJE19410.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|394282349|gb|EJE26550.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|394288730|gb|EJE32634.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|394291788|gb|EJE35574.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|394294485|gb|EJE38164.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|394296118|gb|EJE39748.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|394296584|gb|EJE40209.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|394300592|gb|EJE44086.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|406655792|gb|EKC82215.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
Length = 643
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|418324495|ref|ZP_12935732.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
gi|365225912|gb|EHM67148.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
Length = 642
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 418/619 (67%), Gaps = 8/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYA IEV + DN + + DNGRGIP+D
Sbjct: 30 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYADTIEVIIEKDNWIRITDNGRGIPVDTQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V RD YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSERLEVYVHRDNKIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V+ D GT IRF D ++FT +D+ T+ RI+ELAFLN
Sbjct: 148 AYERGVP--QFDLEVVGETDDDNTGTEIRFKADPEIFTETTVYDYETLQQRIKELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E + E + N Y + GG++ YV+ LN +K+PLHD + + D I +++A
Sbjct: 206 GISITLRDERDEDEVREDN-YHYEGGIKSYVEMLNENKEPLHDEPIYIHQTKDDIEVEIA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S ++ +L YAN+I T +GGTH EG K +L+R LNS G +SK +KD LSGE
Sbjct: 265 LQYNS-GFATNLLTYANNIHTYEGGTHEEGFKRALSRILNSYGLQSKIIKDDKDKLSGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ +L HP V I+ K
Sbjct: 324 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDKLFSAQFERFLYEHPQVGRVIVDK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIFIVEGDSAGGS K+
Sbjct: 384 GIMASRARVAAKKAREVTRRKSALEVSSLPGKLADCSSKNPDESEIFIVEGDSAGGSTKE 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F+ RYHKII
Sbjct: 444 GRDSATQAILPLRGKILNVEKSRLDRILNNNEIRSMITAFGTGIGGE-FELSKARYHKII 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ +GK+ Y ++D EL
Sbjct: 503 IMTDADVDGAHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKLTQGKEKYYVFNDRELDN 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NP+ R + Q+ ++DA +A+ F LMG
Sbjct: 563 LKAELNPTPKWSISRYKGLGEMNADQLWETTMNPDNRSMLQVTLDDAIDADQTFEMLMGD 622
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 623 VVENRRQFIEDNAVYANLD 641
>gi|418618874|ref|ZP_13181726.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
gi|374826443|gb|EHR90340.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
Length = 640
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/619 (51%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQELEVYVHRNETIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 204 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 263 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 322 TREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 382 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 442 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 561 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|76802387|ref|YP_327395.1| DNA topoisomerase II subunit B (DNA gyrase) [Natronomonas pharaonis
DSM 2160]
gi|76558252|emb|CAI49840.1| DNA gyrase subunit B [Natronomonas pharaonis DSM 2160]
Length = 639
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/614 (51%), Positives = 422/614 (68%), Gaps = 9/614 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY IEV + D SV+V D+GRGIP+D H
Sbjct: 27 MYIGSTDTRGLHHLVYEVVDNAIDEALAGYCDTIEVVINDDGSVTVRDDGRGIPVDTHED 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV + RDG +H
Sbjct: 87 HDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSKWLEVEIKRDGHVWHH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P L V +D + GT IRFWPD +F T F +T+ R+RELAFLNP
Sbjct: 145 RFDHGEPENGLE-QVREMDPNESTGTEIRFWPDDDIFETT-DFTFSTLESRLRELAFLNP 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I +R D PE+ + + + GG+ E+V +LN + LH+ ++ F + D I +++A
Sbjct: 203 GVGITIR--DERPEEPDASTFEYDGGIREFVAYLNETRDVLHENIIYFEDEEDDIHVEVA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q + ++ +AN+I T +GGTH+ G K +LTR +N + +KD D +L GE
Sbjct: 261 MQ-ATAGVQGSIHAFANNINTREGGTHLTGFKTALTRVINDYATSNGMLKDLDGNLKGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +V E L +LE HPD ++I+SK
Sbjct: 320 IREGLTAVISIKHPDPQFEGQTKTKLGNGEVRGIVESAVHEELATHLEEHPDTAEAIISK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AAK+A +L R+KS L S+SLPGKL+DC + PEESE+F+VEGDSAGGSAKQ
Sbjct: 380 AVEAAKARKAAKKAEELTRRKSALESTSLPGKLSDCQTRDPEESELFVVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+ FQAILPLRGKILNVE+ + +N EI+NLI A+G G+ GE+F E RY KII
Sbjct: 440 GRNPEFQAILPLRGKILNVEKHRLDRILENNEIRNLITAVGTGI-GEEFDIEEARYQKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
IL DADVDGAHIRTLLLTF YR+ L + G +Y PPLY+V G +AE +
Sbjct: 499 ILCDADVDGAHIRTLLLTFLYRHMTPLIEAGYVYAAQPPLYRVRDGGDTYDAMTEAERDR 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +QRFKGLGEM P QLW+TT+NPE R+LKQ+ IEDAA A+ +FS LMG
Sbjct: 559 IVEEVCDGSPDQVQRFKGLGEMNPKQLWDTTMNPENRILKQITIEDAAAADRMFSVLMGD 618
Query: 600 RVDTRKELIQNAAN 613
V+ RK+ I+ A+
Sbjct: 619 AVEPRKQFIKEHAD 632
>gi|150387859|ref|YP_001317908.1| DNA gyrase subunit B [Alkaliphilus metalliredigens QYMF]
gi|149947721|gb|ABR46249.1| DNA gyrase, B subunit [Alkaliphilus metalliredigens QYMF]
Length = 635
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 433/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN+VDEA AGY I+V + DNS+ V DNGRGIPI+ HP
Sbjct: 28 MYIGSTGPRGLHHLVYEVVDNSVDEALAGYCDVIDVTIYQDNSIKVVDNGRGIPIETHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETV+TVLHAGGKFGG S LHGVG+SVVNALSE +EV V +DG Y Q
Sbjct: 88 TGKSTLETVMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEYVEVEVRKDGKLYKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+T V V GT I F D ++F I + + T+ R+RE+AFLN
Sbjct: 146 RYERGIPIT----DVQEVGETTETGTTITFKADSEIFE-EILYVYTTLENRLREMAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR D E+ + + + GG++E+V LN +++ L D V+ F K +G +++A
Sbjct: 201 GIKITLR--DLREEEVMESSFRYDGGIQEFVMHLNRNREALIDKVIYFEKQKEGSVVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ AY++ + YAN+I T +GGTH+ G KA LTR +N +K+ +K+K+I+L GE
Sbjct: 259 LQYTG-AYTENIFSYANTINTHEGGTHLSGFKAGLTRVINEYARKNGILKEKEINLLGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ +P+FEGQTKT+LGN E++ +V+ S +YL +LE +P I+ K
Sbjct: 318 IREGLTAIISVKMADPQFEGQTKTKLGNSEMKGIVESSTSQYLEAFLEENPHEAKIIIEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A AAK+AR+L R+K L +++LPGKLADC+ P SEI+IVEG+SAGGSAKQ
Sbjct: 378 SLRAQRAREAAKKARELTRRKGALENTALPGKLADCAEKDPALSEIYIVEGNSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + + EI+N+I A G G+ G +F E +RYHKI+
Sbjct: 438 GRDRATQAILPLRGKILNVEKSRLDRILGSAEIRNMITAFGTGI-GIEFDIEKVRYHKIV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY K L + G +Y+ PPLYK+++GK Y Y D E++K
Sbjct: 497 IMTDADVDGAHIRTLLLTFFFRYMKPLIELGYVYIAQPPLYKLKKGKVENYAYSDEEMQK 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +A IQR+KGLGEM P QLW+TT+NPE R Q+ IEDAA A+ +F++LMG
Sbjct: 557 IIVQMGGSA--DIQRYKGLGEMNPEQLWDTTMNPETRTFLQVSIEDAAGADDIFNTLMGD 614
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I QN+ + NLD
Sbjct: 615 KVEPRRQFIEQNSKYVTNLD 634
>gi|386712349|ref|YP_006178671.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
gi|384071904|emb|CCG43394.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
Length = 639
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 313/619 (50%), Positives = 423/619 (68%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+ I+V + DNS+SV DNGRGIP+ +
Sbjct: 31 MYIGSTNEKGLHHLVWEIVDNSIDEAMAGHCDQIQVMIEKDNSISVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSKLEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG P L + + GTRI+F PD+Q+FT ++++ T+A R RELAFLN
Sbjct: 149 AFHRGVPEEDLKV----IGDTEITGTRIQFKPDEQIFTETVEYNFETLATRTRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
LTI++ + +D E Y ++ GG+ YV+ LN ++ LH+ + D I+I++AL
Sbjct: 205 GLTISIEDKRTDEEPVSY---YYEGGIRSYVEHLNRTREVLHEPFFIESEQDDISIEIAL 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D ++ + YAN+I T +GGTH G K LTR +N +K+ KD D +L+G+ V
Sbjct: 262 QY-NDGFASNLYSYANNIHTYEGGTHESGFKTGLTRVINDYARKNNMFKDMDPNLTGDDV 320
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT IIS++ P+P+FEGQTKT+LGN E R V D E +++L +P++ ++ K
Sbjct: 321 REGLTAIISIKHPDPQFEGQTKTKLGNSEARTVTDALFSEGFSKFLFENPNMARIVVEKG 380
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR+L R+K+ L S+LPGKLADCSS P SEI++VEGDSAGGSAKQG
Sbjct: 381 LMASRARMAAKKARELTRRKNALEVSNLPGKLADCSSKDPSISEIYVVEGDSAGGSAKQG 440
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKI+I
Sbjct: 441 RDRHFQAILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDISKARYHKIVI 499
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+++GK V Y Y D +L +
Sbjct: 500 MTDADVDGAHIRTLLLTFFYRYMRPLIEHGYIYIAQPPLYKIQQGKAVYYTYSDKQLDTM 559
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ P++ +QR+KGLGEM P QLWETT++PE R L Q+ +EDA A+ F LMG +
Sbjct: 560 LAELPNSPKPGVQRYKGLGEMNPEQLWETTMDPETRTLLQVSLEDAIGADETFDILMGDK 619
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R+ I +NA + NLD
Sbjct: 620 VEPRRNFIEENAQYVQNLD 638
>gi|319893736|ref|YP_004150611.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|386318035|ref|YP_006014198.1| DNA gyrase subunit B [Staphylococcus pseudintermedius ED99]
gi|317163432|gb|ADV06975.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|323463206|gb|ADX75359.1| DNA gyrase, B subunit [Staphylococcus pseudintermedius ED99]
Length = 640
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/619 (51%), Positives = 417/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE+LEV V RDG +HQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSETLEVYVHRDGRIHHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V D+ GT IRF D +F +++ T+ RIRELAFLN
Sbjct: 148 AYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D E + + Y + GG++ YV+ +N +K+PLHD V + D I +++A
Sbjct: 204 GIRITLTDE-RDEENVREDSYHYEGGIKSYVELINENKEPLHDEPVYVHQTRDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S ++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE
Sbjct: 263 LQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K
Sbjct: 322 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K
Sbjct: 382 GIMASRARIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K +SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG
Sbjct: 561 LKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|302390804|ref|YP_003826624.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302202881|gb|ADL11559.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 639
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 317/616 (51%), Positives = 433/616 (70%), Gaps = 13/616 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY+G TG RGLHHLVYE++DN++DEA AGY NIEV + N V+V D+GRGIPI HP
Sbjct: 31 MYVGGTGARGLHHLVYEVVDNSIDEALAGYCDNIEVIIEPGNVVTVIDDGRGIPISSHPN 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NK A+E V+TVLHAGGKF + GY VSGGLHGVG+SVVNALSE LEV V RD YHQ
Sbjct: 91 LNKPAVEIVMTVLHAGGKF--DNEGYKVSGGLHGVGVSVVNALSEWLEVEVMRDNKIYHQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G PV LT + GT I+F PD ++F + I F++ + R++ELA+LN
Sbjct: 149 RYEEGVPVKDLTV----IGESQASGTMIKFKPDLEIFES-IDFEYKKLIKRLKELAYLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ++ + D K +Y GG+ +VQ LN +K P+H+ + F + + I++A
Sbjct: 204 GIKIEIKDKRRDEIKTDIFQY--DGGIVSFVQELNENKDPIHEEPIYFETEEEDNHIEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ ++ Y D + +AN+I T +GG H+ G K++LTRT+N ++ +K+ D +LSG+
Sbjct: 262 IQY-NETYVDNIFTFANNINTHEGGNHLSGFKSALTRTINDYARRHDYLKEDDSNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I++V++P+P+FEGQTKT+L N EVR +VD V E L +LE P++ I+ K
Sbjct: 321 IREGIVAIVNVKLPDPQFEGQTKTKLANSEVRGIVDSVVSENLDRFLEEDPEIGSIIVQK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+AR+L R+KS L S++LPGKLADCSS PEESE++IVEGDSAGGSAKQ
Sbjct: 381 AIKAAEARKAAKKARELTRRKSALTSTALPGKLADCSSRDPEESELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPL+GKILNVE+ + N EI++LI ALG G+ G++F E RY KII
Sbjct: 441 GRDRKFQAILPLKGKILNVEKARLNKILNNNEIRSLITALGTGI-GKEFDMEQARYKKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYKV +G++ Y Y+D +L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRPLLEAGNIYIAQPPLYKVNKGRKEYYVYNDRKLEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + SIQR+KGLGEM P QLWETT++PE R Q+ IEDA A+ +F++LMG
Sbjct: 560 LLNEIGRSGI-SIQRYKGLGEMNPKQLWETTMDPENRTTLQVQIEDAVMADDIFTTLMGD 618
Query: 600 RVDTRKELIQNAANLV 615
+V R++ IQ A V
Sbjct: 619 KVAPRRKFIQKHAKEV 634
>gi|418328445|ref|ZP_12939557.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
gi|365231970|gb|EHM72986.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
Length = 643
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEIREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|242243251|ref|ZP_04797696.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|416127533|ref|ZP_11596941.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|418631677|ref|ZP_13194129.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|420176465|ref|ZP_14682885.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|420178304|ref|ZP_14684636.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|420180889|ref|ZP_14687098.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|420192455|ref|ZP_14698314.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|420200868|ref|ZP_14706507.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
gi|242233200|gb|EES35512.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|319399910|gb|EFV88156.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|374834345|gb|EHR97993.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|394241009|gb|EJD86430.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|394246494|gb|EJD91750.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|394248368|gb|EJD93606.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|394261185|gb|EJE05985.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|394267464|gb|EJE12054.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
Length = 643
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|418412794|ref|ZP_12986045.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
gi|410883855|gb|EKS31687.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
Length = 643
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ Y+ LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYIDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|304437923|ref|ZP_07397869.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369063|gb|EFM22742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 685
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 326/621 (52%), Positives = 427/621 (68%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + V + DNS++V DNGRGIP+D+H
Sbjct: 78 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVGVTIHKDNSITVTDNGRGIPVDMH-E 136
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG +
Sbjct: 137 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTEMDVEVRRDGKIFAI 194
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLN 179
+SRG VTT H + + D GTR+ F PD ++FT T FD T+ R+RELAFLN
Sbjct: 195 SFSRG--VTTTKLH--EIGTSDTTGTRVHFVPDPEIFTVTTYSFD--TLKHRLRELAFLN 248
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+TI L E +++ + F GG+ +V LN K+ +++ + F D I +++
Sbjct: 249 HGITITLTDERGTEVRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDIVVEI 306
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 307 AMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGE 365
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P V +L
Sbjct: 366 DVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAVTKKVLD 425
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAK
Sbjct: 426 KALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAK 485
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KI
Sbjct: 486 QGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKI 544
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E
Sbjct: 545 IIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDDEQA 604
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K + + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 605 KKLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMG 663
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 DKVEPRRQFIEENAKLVRNLD 684
>gi|452992024|emb|CCQ96561.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 637
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 430/619 (69%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA GYA I++ + DN V+V DNGRGIP+ +HP
Sbjct: 28 MYIGSTSSRGLHHLVWEIVDNSIDEAMNGYADQIDIIVRRDNRVTVIDNGRGIPVGIHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKF GY VSGGLHGVGLSVVNALSE L V ++G Y Q
Sbjct: 88 TGKSTVETVLTVLHAGGKF--GGKGYKVSGGLHGVGLSVVNALSEELVAEVKKEGKMYRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P L ++ S + GT I F PD ++FT +FD++ + RIRELAFLN
Sbjct: 146 TYHRGVPEGPLK--IVGEISPEISGTTITFKPDPEIFTETTEFDYDVLQSRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ + L +D N+ E+ + GG+ E+V +LN ++ LH + +GI +++A+
Sbjct: 204 GIKLTL----TDERTNRREEFHYEGGIAEFVLFLNKNRNVLHSPIYMHDQREGIDVEIAI 259
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ D +S + +AN+I T +GGTH G K LTR +N +K+ +K+ + +L+G+ V
Sbjct: 260 QY-HDEFSTNLYSFANNIHTHEGGTHEVGFKTGLTRVINDYARKNNLLKENEENLTGDDV 318
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT IISV++P P+FEGQTKT+LGN E + + + E+ + +L+ +P V I+ K+
Sbjct: 319 REGLTAIISVKIPEPQFEGQTKTKLGNSEAKTITESLFSEHFSTFLDENPSVAKKIIEKA 378
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ A +A AA++AR+L R+K+ L SSLPGKLADCSS SE++IVEGDSAGGSAKQG
Sbjct: 379 VLASRAREAARKARELTRRKNALEVSSLPGKLADCSSRDASISELYIVEGDSAGGSAKQG 438
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G++ RYHKIII
Sbjct: 439 RDRNFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDELDITKARYHKIII 497
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYR+ +TL + G IY+ PPLY++ +GK+V Y Y ++EL+KV
Sbjct: 498 MTDADVDGAHIRTLLLTFFYRHMRTLVENGFIYIAQPPLYRISQGKKVLYAYKESELEKV 557
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
K S IQR+KGLGEM P QLWETT+NP+ R+L ++ +EDA EA+ +F +LMG R
Sbjct: 558 KKSLQGKGEIEIQRYKGLGEMDPEQLWETTMNPKNRILLRVHLEDAMEADQIFDTLMGDR 617
Query: 601 VDTRKELIQNAANLV-NLD 618
V+ R++ I + A+ V NLD
Sbjct: 618 VEPRRDFIHDHAHYVRNLD 636
>gi|371777742|ref|ZP_09484064.1| DNA gyrase subunit B [Anaerophaga sp. HS1]
Length = 656
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 309/627 (49%), Positives = 431/627 (68%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY +I+V + D S++V DNGRGIP+D H
Sbjct: 37 MYIGDIGQKGLHHLVYEVVDNSIDEALAGYCDSIQVTINEDGSITVVDNGRGIPVDFHEK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS SL+ V RDG + Q
Sbjct: 97 EGKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSSLKAEVRRDGKIFRQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP+ + V + D+ GT I F PD +F ++ ++ +AGR+RELAFLN
Sbjct: 155 EYERGKPL----APIREVGTTDQTGTAITFMPDSTIFNNT-EYKYSVLAGRMRELAFLNA 209
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITID 237
L I L K + D E N +E F++ GL E+V +++ +++PL + F V + I +D
Sbjct: 210 GLEIILTDKREKDEEGNFKSERFYSKDGLIEFVNFIDDNREPLIEKPIFISTVKNDIPVD 269
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++++ + Y N+I TI+GGTH+ G + LTRTL + +KS +SG
Sbjct: 270 IAILYNT-SFNENVYSYVNNINTIEGGTHLTGFRRGLTRTLKNWAEKSGMFSKLKFDISG 328
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN +V VDQ+V L+ YLE +P +I+
Sbjct: 329 DDFREGLTAVISVKVAEPQFEGQTKTKLGNSDVSLAVDQAVSTMLSNYLEENPKDAKAIV 388
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K + A A AA++AR+LV++KSVL LPGKLADCS PE++EIF+VEGDSAGG+A
Sbjct: 389 NKVILAATARHAARKARELVQRKSVLSGGGLPGKLADCSVRDPEKAEIFLVEGDSAGGTA 448
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDRRFQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K + L
Sbjct: 449 KQGRDRRFQAILPLRGKILNVEKALQHKVFENEEIKNIFTALGVTIGTEEDSKALNLDKL 508
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+TDADVDG+HI TL++TFF+RY K L +G +Y+ PPLY +++GK +YC+
Sbjct: 509 RYHKIVIMTDADVDGSHIATLIMTFFFRYMKDLIKKGYLYIATPPLYFLKKGKIEEYCWT 568
Query: 534 DAELKKVKSSFPSNA--LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
DA+ ++ + + +QR+KGLGEM QLW TT+NPE+R+L+Q+ E+AAEA+
Sbjct: 569 DAQRREFIEKYANGKEDTVHVQRYKGLGEMNAEQLWMTTMNPEKRLLRQVTYENAAEADR 628
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVPPRREFIEKNATYANID 655
>gi|164510802|emb|CAK18883.1| topoisomerase II subunit B [Staphylococcus pseudintermedius]
Length = 611
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 417/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV + DN + V DNGRGIP+D+
Sbjct: 1 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVVIEKDNWIKVTDNGRGIPVDIQEK 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE+LEV V RDG +HQ
Sbjct: 61 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSETLEVYVHRDGRIHHQ 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V D+ GT IRF D +F +++ T+ RIRELAFLN
Sbjct: 119 AYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNK 174
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D E + + Y + GG++ YV+ +N +K+PLHD + + D I +++A
Sbjct: 175 GIRITLTDE-RDEENVREDSYHYEGGIKSYVELINENKEPLHDEPIYVHQTRDDIEVEIA 233
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S ++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE
Sbjct: 234 LQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGED 292
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K
Sbjct: 293 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEK 352
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K
Sbjct: 353 GIMASRARIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKS 412
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+
Sbjct: 413 GRDSRTQAILPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGE-FDISKARYHKIV 471
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 472 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 531
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K +SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG
Sbjct: 532 LKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGD 591
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 592 VVENRRQFIEDNAVYANLD 610
>gi|78707359|gb|ABB46485.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707361|gb|ABB46486.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707363|gb|ABB46487.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 312/613 (50%), Positives = 409/613 (66%), Gaps = 15/613 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L + V DNGRGIP+D+HP
Sbjct: 25 MYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILKGEVIRVTDNGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y Q
Sbjct: 85 TKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L S D+ GT I F D +FT + +++ T+ RI++LAFLN
Sbjct: 143 KYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + L D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA
Sbjct: 199 GLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ D+YS + + N+I T +GG H +G K +LTR ++ K KD S+SGE
Sbjct: 257 MQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K
Sbjct: 314 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 374 VLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+
Sbjct: 434 GRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIV 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL +
Sbjct: 493 IMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNE 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG
Sbjct: 553 LLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGE 610
Query: 600 RVDTRKELIQNAA 612
V+ RKE IQN A
Sbjct: 611 EVEPRKEFIQNNA 623
>gi|293400051|ref|ZP_06644197.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453209|ref|ZP_09545105.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
gi|291306451|gb|EFE47694.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964048|gb|EHO81586.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
Length = 648
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 308/620 (49%), Positives = 430/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+A++I++A+ DN + V DNGRG+P +
Sbjct: 41 MYIGSTSEKGLHHLVWEIVDNSIDEALAGFATDIDIAIEKDNIIRVEDNGRGMPTGIVEK 100
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ S +ET+ T+LHAGGKFGG + Y VSGGLHGVG SVVNALSE LEVTV+++G Y
Sbjct: 101 SGISGVETIFTILHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVTVYQNGNIYFM 158
Query: 121 KYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G K V +L + D+ G+ +RF D +FT +D T+ RIR+LAFLN
Sbjct: 159 RFENGGKAVESLKI----IGKTDKHGSMVRFKADPTIFTETQVYDFETLNTRIRQLAFLN 214
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDL 238
+ + L E + K Y + GG+ +YV++LN +K PLH+ V + + + DGI ++
Sbjct: 215 KSIKLILTDEREEERKEIV--YKYDGGIRQYVEYLNQNKSPLHEEVVYVEGIEDGILAEI 272
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D Y + + N+I T +GGTH +G + +LTR +N+ +++ +K KD +L+G+
Sbjct: 273 ALQY-NDGYVPNIYSFCNNINTAEGGTHEDGFRLALTRIVNAYARENGMIK-KDETLAGD 330
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V + E L ++ +PD I+
Sbjct: 331 DVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVSSILGEQLEKFFLENPDTAKIIID 390
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + A KA +AAK+AR+L R+KS L SSLPGKLADCSS E EI+IVEGDSAGGSAK
Sbjct: 391 KCILASKARMAAKKARELTRRKSALEISSLPGKLADCSSRDASECEIYIVEGDSAGGSAK 450
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ +FQAILPLRGKILNVE+ +++N EI+++I A G G+ GE+ LRYHKI
Sbjct: 451 QGRNSKFQAILPLRGKILNVEKARLHRIFENNEIRSMITAFGCGI-GEEMDISKLRYHKI 509
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHI TL+LTFFYR+ + + + G +Y+ +PPL+K+++G++++Y YD++
Sbjct: 510 IIMTDADVDGAHICTLMLTFFYRFLRPIIEGGYVYIAMPPLFKIQKGQRIEYVYDESSRD 569
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+V + N SIQR+KGLGEM P QLWETT++P R LK++ I DA EA+ VF LMG
Sbjct: 570 RVIAEMGENV--SIQRYKGLGEMNPEQLWETTMDPAFRTLKKVNINDAMEADKVFEMLMG 627
Query: 599 ARVDTRKELIQNAANLVNLD 618
V R+E IQ A LD
Sbjct: 628 EEVGPRREFIQENAVYAELD 647
>gi|414154088|ref|ZP_11410408.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454273|emb|CCO08312.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 638
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/623 (51%), Positives = 428/623 (68%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY I V + DNSV+V DNGRGIP+D+HP
Sbjct: 30 MYIGSTSARGLHHLVYEVVDNSIDEALAGYCDKIAVTVHRDNSVTVEDNGRGIPVDIHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHAGGKFGG S LHGVG+SVVNALSE L V + R+G Y Q
Sbjct: 90 VGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEILSVEIKRNGHIYRQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++RG P T L + GT++ F PD ++F + F T+ RIRELA+LN
Sbjct: 148 EFARGIPTTELKI----IGKSKSTGTKVTFKPDAEIFEELV-FSLETLTQRIRELAYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L+ E DP Q + F GG++++V+ LN K+ LH + G R+ V +
Sbjct: 203 GVKITLKDERKDPPVEQV--FQFEGGIKDFVKHLNKTKQVLHPKPIYISGEREQV---IV 257
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ ALQ+ +D Y++TML YAN+I T+DGGTH G+K +LTR +N G+ +K+ D +L+
Sbjct: 258 EAALQY-NDGYTETMLSYANNIHTVDGGTHEIGLKTALTRVVNDYGRNHNILKNNDANLT 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REG T +ISV+VP P+FEGQTKT+LGN EVR +V+ E + +L+ +P V I
Sbjct: 317 GEDIREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVESIFAEKFSTFLDENPSVAKKI 376
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+++A + AA++AR+L R+KS L + SLPGKLADCS P SE+++VEGDSAGGS
Sbjct: 377 IEKAVTAARVREAARKARELTRRKSALETMSLPGKLADCSEKDPSISELYLVEGDSAGGS 436
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKI+NVE+ + NEEI+ +I ALG G+ GEDF RYH
Sbjct: 437 AKQGRDRRFQAILPLRGKIINVEKARMDKILANEEIRAMITALGTGI-GEDFDLNKARYH 495
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLL+TFFYR+ + L + G +YV PPL++V +G Y Y + E
Sbjct: 496 KIIIMTDADVDGAHIRTLLMTFFYRHMRPLIEAGYLYVAQPPLFRVRKGNLDSYVYSEKE 555
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ + + +IQR+KGLGEM P QLWETT++P+ R + Q+ ++DA EA+ FS L
Sbjct: 556 LEELLKRIGHDKV-NIQRYKGLGEMNPEQLWETTMDPDTRTMLQVTLQDAIEADATFSML 614
Query: 597 MGARVDTRKELIQ-NAANLVNLD 618
MG RV+ R++ IQ NA + NLD
Sbjct: 615 MGDRVEPRRDFIQENARYVRNLD 637
>gi|258646055|ref|ZP_05733524.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
gi|260403425|gb|EEW96972.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
Length = 649
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/621 (52%), Positives = 436/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ ++IEV L D S ++ DNGRGIP LH
Sbjct: 41 MYIGSTSARGLHHLVYEVVDNSIDEALAGFCTHIEVTLNDDGSCTITDNGRGIPTGLH-E 99
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVV ALSE VTV R+G +
Sbjct: 100 TGKPAMEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVVTALSEWTTVTVKREGHFHEM 157
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K +RG +T H+ GT++ F PD ++F FD++T+ R+RELAFLN
Sbjct: 158 KLARG----VVTQHMKTFGETTETGTQVTFKPDGEIFKEGTDFDYDTLKVRMRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
LTI L D + + +AGG+ E++++LN + K L D V+ F + D + +D+
Sbjct: 214 GLTITL--TDVRDGATHQDVFCYAGGIVEFIKFLN-EGKDLVDPGVISFEGEKDRVIVDI 270
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ + YS++M + N+I T++GG H+ G + +LTRT+N + + +K + +LSG+
Sbjct: 271 AMQYQA-GYSESMYTFVNNINTVEGGMHLTGFRNALTRTINDYARSNNLLKPNEENLSGD 329
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLTC+ISV+VPNP+FEGQTKT+LGN +V+ +VD V + L YLE HP I+S
Sbjct: 330 DVREGLTCVISVKVPNPQFEGQTKTKLGNQDVKGIVDTIVSDGLRTYLEEHPAEAKEIIS 389
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
KS++A +A AA+RAR+L R+K+ L SSLPGKLADCS P+ +EI+IVEGDSAGGSAK
Sbjct: 390 KSITANRAREAARRARELTRRKNALEVSSLPGKLADCSEKDPKFTEIYIVEGDSAGGSAK 449
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR+QAILPLRGKILNVE+ + ++ I+ +I A G GV EDF + LRY+KI
Sbjct: 450 SGRDRRYQAILPLRGKILNVEKARLDKVLNSDAIRTMITAFGTGV-AEDFDIKKLRYYKI 508
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY K L EG +Y+ PPLY+V +G+Q Y YDD E
Sbjct: 509 IIMTDADVDGAHIRTLLLTFFYRYMKPLITEGHVYIAQPPLYQVRKGRQKYYTYDDVEQD 568
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + + +IQR+KGLGEM P QLW+TT+NPEQR++ ++ + DA EA+ +F+ LMG
Sbjct: 569 KLLNEIGRDGC-AIQRYKGLGEMNPEQLWDTTMNPEQRVMLKVELTDAVEADRLFTILMG 627
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R++ I+ NA N+ NLD
Sbjct: 628 DKVEPRRKFIEDNAKNVSNLD 648
>gi|288574018|ref|ZP_06392375.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569759|gb|EFC91316.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 637
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/624 (50%), Positives = 430/624 (68%), Gaps = 23/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHH VYE++DNAVDEA AGY S I+V + D SVSV+DNGRGIP+D HP+
Sbjct: 30 MYIGDTATRGLHHCVYEVVDNAVDEALAGYCSEIKVTIHTDGSVSVSDNGRGIPVDPHPS 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A E VLTVLHAGGKF + Y VSGGLHGVG+SVVNALS LE+ + R+G + Q
Sbjct: 90 NGRPACEVVLTVLHAGGKFNNDT--YKVSGGLHGVGVSVVNALSSWLELDICRNGKTWGQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G PVT L D+ GT + F PD ++F + F + R+RE+AFL P
Sbjct: 148 RFEKGIPVTDLEGGY----ETDKSGTTVHFMPDDEIFE-EVCFSAEILGNRLREMAFLIP 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I L D E+ ++ + + GGL +V++LN DK L V G R D I +
Sbjct: 203 GLKITLI---DDREEKEWT-FHYEGGLASFVEYLNRDKSSLFPKPIVVSGER---DSIFV 255
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ LQ+ +D Y + + +AN I T++GGTH+ G+++++TR +N +++K +KDKD +LS
Sbjct: 256 EVGLQY-NDGYHERLFSFANLIHTMEGGTHVIGLRSAITRAINESARRNKVLKDKDANLS 314
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE ++EGLTC+ISV++ +P+FEGQTKT+LGN EV+ +VD V E L L+ P VL +
Sbjct: 315 GEDLKEGLTCVISVKLGDPQFEGQTKTKLGNSEVKGIVDSIVYEGLLVALDEDPSVLKPV 374
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A +A AAK+AR+LVR K+ + +LPGKLADCS PE E++IVEGDSAGGS
Sbjct: 375 VDKAVKARQAREAAKKARELVR-KTAMTGLNLPGKLADCSGRIPENCEVYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + ++EI+ +I+ALG G+ GEDF LRYH
Sbjct: 434 AKQGRDRAFQAILPLRGKILNVEKARLDRILSSKEIRTIIQALGCGI-GEDFDTTKLRYH 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHI TLLLTFFYRY K L + G IY+ PPLY+V+ G+ +Y + D +
Sbjct: 493 KIIIMTDADVDGAHISTLLLTFFYRYMKELVEGGYIYLAQPPLYRVQIGRHSEYIFSDKD 552
Query: 537 LKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ +S + +QR+KGLGEM P QLWETT++PE R++K++ ++DA A+ FS
Sbjct: 553 LRTFMNSHKDTGKKIGVQRYKGLGEMNPEQLWETTMDPENRVMKRIEVDDALAADEYFSI 612
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+E IQ ++ V NLD
Sbjct: 613 LMGDKVEPRREFIQAHSHEVQNLD 636
>gi|419770807|ref|ZP_14296873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
gi|383362634|gb|EID39981.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
Length = 643
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVVIEKDNWIIVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|307243405|ref|ZP_07525562.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
gi|306493215|gb|EFM65211.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
Length = 635
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 428/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG S I +++ D SV+V D+GRGIP+++HP
Sbjct: 26 MYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSEIYISINPDGSVTVKDDGRGIPVEVHPK 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S LETVLTVLHAGGKFGG S LHGVG+SVVNALS+ L V RDG Y Q
Sbjct: 86 TGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSDWLVAEVSRDGKVYRQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L V+ SKD GT I F PD +F I+F + T+ R REL+FLN
Sbjct: 144 EYKRGVPTGKL--EVVSESSKD-SGTSITFMPDASIFD-EIEFKYETLEYRFRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ED + + + + GGL EY+++LN K P+HD ++ K + TI+LA
Sbjct: 200 VIKIEF--EDKREGQEESKTFHYTGGLVEYIKYLNRTKTPIHDQIIYVDKIANDCTIELA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +DAY++ + +AN+I T +GG H+ G KA+LT+ +N +++ +K+KD +LSGE
Sbjct: 258 LQY-TDAYTENIYSFANNINTHEGGVHLSGFKAALTKCVNDYARRNNILKEKDPNLSGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT I+SV++P+P+FEGQTKT+LGN +R +VD E + +LE +P V ++ K
Sbjct: 317 IREGLTAIVSVKLPDPQFEGQTKTKLGNTFMRGLVDSIANEEIGAFLEENPSVAKLVIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AAK+ARDL R+K+ L +SLPGKLADCS +PE+SEIF+VEGDSAGGSAK
Sbjct: 377 CLRAQRAREAAKKARDLTRRKNALEFTSLPGKLADCSEKSPEKSEIFLVEGDSAGGSAKS 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + +EEI+N+I A G G+ GEDF+ E LRYHKI+
Sbjct: 437 GRDRNIQAILPLRGKILNVEKSRLDKILSSEEIKNMITAFGCGI-GEDFEPEKLRYHKIV 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L + G +Y PPL+KV++GK+ Y + D EL
Sbjct: 496 IMTDADVDGAHIRTLLLTFFFRYMRPLIEGGYVYAAQPPLFKVKKGKKEYYAFSDNELSS 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + R+KGLGEM QLWETT++PE R L Q+ I+DA A+ +FS LMG
Sbjct: 556 LLDEVGRQGA-DVSRYKGLGEMNAEQLWETTMDPESRTLLQVTIDDAIMADEIFSMLMGD 614
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V R++ I+ NA + NLD
Sbjct: 615 KVAPRRDFIEANAKYVTNLD 634
>gi|108802861|ref|YP_642798.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
gi|108764104|gb|ABG02986.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
Length = 644
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 306/620 (49%), Positives = 430/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLV+EI+DN++DEA AGY + I V + DNSV+V+D+GRG+P+ +
Sbjct: 34 MYIGSTGPRGLHHLVWEIVDNSIDEALAGYCTEISVTVHPDNSVTVSDDGRGMPVGVMEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSA E ++T LHAGGKF G + Y VSGGLHGVG SVVNALSE LE+ + RDG + Q
Sbjct: 94 YGKSAAEVIMTTLHAGGKFDGQT--YKVSGGLHGVGASVVNALSEWLELEIRRDGHLWTQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT L + ++ GT +RF PD Q+F T ++F +T++ R RE AFLN
Sbjct: 152 RYERGFPVTGLE-RGRKLGKREGTGTTVRFRPDPQIFET-VEFSFDTLSRRFRESAFLNK 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L E E+ + Y + GG++++V +N K P+H ++ F ++ + +++A
Sbjct: 210 GLRIRLADER---EEGREVVYRYEGGIKDFVAHINEAKDPVHKTILYFHREEEAGDVEVA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+QW S Y D++ +AN+I T +GGTH+ G +A+LTRT+N ++ +K+K+ +L+G+
Sbjct: 267 MQWNS-GYQDSVFTFANNINTHEGGTHLSGFRAALTRTINEYARQKGLLKEKEENLTGDD 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL +ISV++ P+FEGQTKT+LGN E++ +V+ + +L E+LE +P +I++K
Sbjct: 326 IREGLAAVISVKLREPQFEGQTKTKLGNTEIKGLVESATNRHLAEFLEENPGQARAIVTK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A LAA +AR +R K L SS+LPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 386 AINASRARLAASKARKAIR-KGYLESSTLPGKLADCSSKDPARSELYIVEGDSAGGSAKQ 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + + N EIQ +I A+G GV G+ F E RYHKI+
Sbjct: 445 GRDRNFQAILPLRGKILNVEKANINKVLSNAEIQAMISAIGAGV-GDSFNIEEARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTL+LTF YR L + G +Y+ PPLYK+ ++ Y Y DAEL++
Sbjct: 504 IMTDADVDGSHIRTLVLTFLYRNMPELIEAGYVYIAQPPLYKITHNRRDVYVYSDAELQE 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ ++ RFKGLGEM P QLWETT++P R L Q+ I+ AA A+ +F++LMG
Sbjct: 564 TLRRLRADGSATVSRFKGLGEMNPQQLWETTMDPANRTLLQVTIDSAATADELFTALMGD 623
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ RK I+ NA N+D
Sbjct: 624 KVEPRKAFIEANAREAKNID 643
>gi|418615337|ref|ZP_13178282.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|418634910|ref|ZP_13197301.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|420166072|ref|ZP_14672760.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|420190648|ref|ZP_14696589.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|420205714|ref|ZP_14711237.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|420209623|ref|ZP_14715059.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|420211483|ref|ZP_14716842.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|420235726|ref|ZP_14740262.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
gi|374817511|gb|EHR81691.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|374836452|gb|EHS00040.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|394234127|gb|EJD79712.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|394258581|gb|EJE03461.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|394269399|gb|EJE13933.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|394278520|gb|EJE22835.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|394280818|gb|EJE25089.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|394302395|gb|EJE45840.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
Length = 643
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTVIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|432328169|ref|YP_007246313.1| DNA gyrase, B subunit [Aciduliprofundum sp. MAR08-339]
gi|432134878|gb|AGB04147.1| DNA gyrase, B subunit [Aciduliprofundum sp. MAR08-339]
Length = 643
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/633 (51%), Positives = 437/633 (69%), Gaps = 29/633 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHL+YE++DN++DEA AGY I V L D SVSV D+GRGIP+D+HP
Sbjct: 24 MYIGSTDERGLHHLIYEVVDNSIDEALAGYCKRISVILHGDGSVSVEDDGRGIPVDIHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAG KF Y ++GGLHGVG+ VVN LSE L+V V RD Y Q
Sbjct: 84 KGKSALEIVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKVYVKRDEKIYFQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-------------QGTRIRFWPDKQVFTTAIQFDHNT 167
Y RGKP + V+ + R +GT +RF PD ++F T +F +
Sbjct: 142 WYVRGKPQCDVHVVGEFVNGQVRWYEAGHEEHFKYPRGTYVRFKPDPEIFETT-EFKYGI 200
Query: 168 IAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVG 226
+ ++R+LAFLN + I L D ++ + + GG+ E+V++LN LH DV+
Sbjct: 201 VKKKLRDLAFLNRGVEIEL----EDERTGKHEVFHYEGGIVEFVKFLNEGYNSLHKDVIY 256
Query: 227 FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSK 286
+ DGI ++ ALQ+ +D+ S+ ++ + N+I T++GGTH+ G +++LT+ +N K
Sbjct: 257 GMDEQDGIIVEFALQY-NDSTSENLIAFVNTINTVEGGTHVSGFRSALTKAINDFAKGKG 315
Query: 287 TVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYL 346
+KD +SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V L+ Y
Sbjct: 316 MLKD--MSLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSVVNRILSTYF 373
Query: 347 ELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 406
E HPDV +I++K+++A +A +AA++AR+L R+K+ L S LPGKLADC+S PEE+E+F
Sbjct: 374 EEHPDVATNIVTKAIAAARARIAARKARELARRKNYLESLDLPGKLADCTSEDPEEAELF 433
Query: 407 IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGE 466
IVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G GV+ E
Sbjct: 434 IVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTGVR-E 492
Query: 467 DFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK 526
DF LRYHKIII+TDADVDGAHIRTLLLTFFYRY L + G +Y+ PLY+++RGK
Sbjct: 493 DFDYSKLRYHKIIIMTDADVDGAHIRTLLLTFFYRYMPELIERGHVYIAQAPLYRIQRGK 552
Query: 527 QVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
++ Y Y D E +++ +P NA S+QRFKGLGEM P QLWETT++PE+R L ++ IEDA
Sbjct: 553 EIYYVYSDEEKEEMLKKYP-NA--SVQRFKGLGEMNPQQLWETTMDPEKRRLIRVTIEDA 609
Query: 587 AEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 618
AEA+ +FS LMG V+ R+E +I++A ++N+D
Sbjct: 610 AEADRLFSILMGEAVEPRREFIIEHAREVMNID 642
>gi|312143598|ref|YP_003995044.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311904249|gb|ADQ14690.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 636
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 307/616 (49%), Positives = 425/616 (68%), Gaps = 15/616 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLV+E++DN++DE AGY I+V + +N ++V D GRGIP D+H
Sbjct: 30 MYIGSTGIKGLHHLVWEVVDNSIDEFLAGYGDEIKVTIHENNEITVEDYGRGIPADIHKD 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A++ VLT LHAGGKF +S Y VSGGLHGVG+SVVNALSE L +T +G +Y Q
Sbjct: 90 SGLPAVQVVLTTLHAGGKFNNNS--YKVSGGLHGVGVSVVNALSEKLVLTTHWEGNKYRQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G P + L + R GT IRF D +F A + +A R++E A+LN
Sbjct: 148 VFKKGVPTSKLE----KLGKTKRSGTVIRFKADSDIFA-ARDYKFENLAHRLQESAYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
LT+ L E + EK + +Y GG++ +V++LN D+ ++ D++ F + +++A
Sbjct: 203 DLTLILIDERGEGEKKKVFQY--DGGIKAFVEFLNKDRNVINEDIIYFESKPEDYEVEMA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + YAN+I TIDGG H+ G K +LTR +N+ K + + K SL G+
Sbjct: 261 IQY-NDGYNERIYSYANNINTIDGGYHLTGFKTALTRAINNFAKNNNRLPAKISSLRGKD 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T II+V++P P+FEGQTKT+LGN E+R +V+ V EYL+ Y + +PD+ + ++ K
Sbjct: 320 VREGITAIINVKLPEPQFEGQTKTKLGNSELRSIVESEVYEYLSLYFDTNPDLANKVIDK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A++A A+K+AR+L ++KS L S++LPGKLADCSS E+SE+FIVEGDSAGGSAKQ
Sbjct: 380 AVQAVRARKASKKARELTKRKSALNSNALPGKLADCSSKKAEKSELFIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVER + N EI ++I ALG G+ GEDF + LRYHKII
Sbjct: 440 GRDRNFQAILPLKGKILNVERARLDKILNNTEIASIITALGAGI-GEDFNIKNLRYHKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TL+LT FYRY L +EG IY+ PPLYKV RGK +Y Y D EL +
Sbjct: 499 IMTDADVDGAHIATLILTLFYRYMPELIEEGYIYLAKPPLYKVSRGKSTKYLYSDQELAE 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
K + +S+QR+KGLGEM P QLW+TT++PE R+L ++ I+D EA+ +F+ LMG+
Sbjct: 559 YKKKHEN---FSLQRYKGLGEMNPRQLWDTTMDPENRVLLRVEIDDDFEADDIFTRLMGS 615
Query: 600 RVDTRKELIQNAANLV 615
RKE I N A LV
Sbjct: 616 NASLRKEFIFNNAELV 631
>gi|162446893|ref|YP_001620025.1| DNA gyrase subunit B [Acholeplasma laidlawii PG-8A]
gi|161985000|gb|ABX80649.1| DNA gyrase, subunit B [Acholeplasma laidlawii PG-8A]
Length = 635
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 312/613 (50%), Positives = 409/613 (66%), Gaps = 15/613 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L + V DNGRGIP+D+HP
Sbjct: 29 MYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILKGEVIRVTDNGRGIPVDIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y Q
Sbjct: 89 TKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L S D+ GT I F D +FT + +++ T+ RI++LAFLN
Sbjct: 147 KYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + L D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA
Sbjct: 203 GLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ D+YS + + N+I T +GG H +G K +LTR ++ K KD S+SGE
Sbjct: 261 MQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K
Sbjct: 318 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 378 VLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+
Sbjct: 438 GRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL +
Sbjct: 497 IMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG
Sbjct: 557 LLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGE 614
Query: 600 RVDTRKELIQNAA 612
V+ RKE IQN A
Sbjct: 615 EVEPRKEFIQNNA 627
>gi|433590818|ref|YP_007280314.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|448331776|ref|ZP_21521027.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
gi|433305598|gb|AGB31410.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|445628735|gb|ELY82038.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
Length = 643
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 304/615 (49%), Positives = 426/615 (69%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++S + GT+I+FWPD +F T + +T++ R+RELAFLN
Sbjct: 145 AFEGGEPVGDME-RVRDMESDEETGTQIQFWPDTGIFETG-EMSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I LR +E++D Y + GG+ E+V++LN + +H DV+ F + I I+
Sbjct: 203 GVRITLRDEREETDDGDVVSETYEYDGGIREFVEYLNETRSAMHEDVIYFEDEEQSIQIE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q + ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L+G
Sbjct: 263 VAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLSDLDNNLTG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +SI+
Sbjct: 322 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAESIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSA
Sbjct: 382 NKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ QAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 442 KQARNPDLQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ + +QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I+ A
Sbjct: 621 GDAVEPRKQFIKEHA 635
>gi|418629092|ref|ZP_13191607.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
gi|374834825|gb|EHR98460.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
Length = 643
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKRKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|334127015|ref|ZP_08500951.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
gi|333390317|gb|EGK61457.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
Length = 684
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY N+EV + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDNVEVVIHRDNSITVTDNGRGIPVDMHE- 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG +
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSEMDVEVRRDGKIHAI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 SFARG--VTVEKLH--EIGTSETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L D E+ + + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLV--DERGEEERRETFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P V +L K
Sbjct: 366 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPTVTKKVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|164510805|emb|CAK18885.1| topoisomerase II subunit B [Staphylococcus pseudintermedius]
Length = 611
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/619 (51%), Positives = 417/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV + DN + V DNGRGIP+D+
Sbjct: 1 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVVIEKDNWIKVTDNGRGIPVDIQEK 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS++LEV V RDG +HQ
Sbjct: 61 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSDTLEVYVHRDGRIHHQ 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V D+ GT IRF D +F +++ T+ RIRELAFLN
Sbjct: 119 AYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNK 174
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D E + + Y + GG++ YV+ +N +K+PLHD + + D I +++A
Sbjct: 175 GIRITLTDE-RDEENVREDSYHYEGGIKSYVELINENKEPLHDEPIYVHQTRDDIEVEIA 233
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S ++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE
Sbjct: 234 LQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGED 292
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K
Sbjct: 293 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEK 352
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K
Sbjct: 353 GIMASRARIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKS 412
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+
Sbjct: 413 GRDSRTQAILPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGE-FDISKARYHKIV 471
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 472 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 531
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K +SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG
Sbjct: 532 LKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGD 591
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 592 VVENRRQFIEDNAVYANLD 610
>gi|239616758|ref|YP_002940080.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
gi|239505589|gb|ACR79076.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
Length = 631
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/623 (51%), Positives = 430/623 (69%), Gaps = 29/623 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHL+YE++DN++DE GY I++ + D SVSV DNGRGIP+D+HP
Sbjct: 25 MYIGSTGKAGLHHLIYEVVDNSIDEVVGGYCDYIKITIFEDGSVSVWDNGRGIPVDIHPE 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALE V+T LHAGGKF S Y +SGGLHGVG+SVVNALSE +EV V+RDG Y Q
Sbjct: 85 TGTSALEVVMTTLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWMEVKVYRDGKIYRQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP T + + D++G+ + F PD VFTT FD + + R +ELAFLNP
Sbjct: 143 RYERGKPTTPVEI----IGETDKRGSLVAFKPDSLVFTTT-DFDFDILESRFKELAFLNP 197
Query: 181 KLTIALRKEDSDPEKNQYNE---YFFAGGLEEYVQWLN-----TDKKPLHDVVGFRKDVD 232
++TI E +Y+E + F GG+ E+V++LN +K+P + + G DV
Sbjct: 198 RVTIEF-------EDRRYDEKRVFHFEGGIVEFVKYLNRKKTAINKEPFY-IEGTYNDV- 248
Query: 233 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 292
I LA+Q+ ++AY + +L + N+I+T++GGTH+ G K LT+ +N +K +KDKD
Sbjct: 249 --KIQLAMQY-TNAYDENILTFVNNIKTVEGGTHLTGFKTVLTKMMNDYARKLNVLKDKD 305
Query: 293 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 352
+L GE VREGLT ++SV V P+FEGQTK +LGN EV + V + +++ L E + H
Sbjct: 306 PNLQGEDVREGLTAVLSVFVKEPQFEGQTKAKLGNEEVYEAVIKVLRDKLPEVFDYHTKE 365
Query: 353 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 412
L +I+ K+L A KA +AAK+AR+++R+K+ L +++LPGKLADC+ST E +E+FIVEGDS
Sbjct: 366 LKAIIIKALDAAKARVAAKKAREMIRRKNALENTTLPGKLADCTSTDLETTELFIVEGDS 425
Query: 413 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 472
AGGSAKQ RDR FQAILPLRGKILNVE+ + KNE+I N+I A+G G+ G+D K E
Sbjct: 426 AGGSAKQARDREFQAILPLRGKILNVEKSSFEKLLKNEQINNIIVAIGTGI-GDDCKLEN 484
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY KIII+TDADVDGAHIRTLLLT FYRY L + G IY+ PLYKVE ++ Y Y
Sbjct: 485 LRYGKIIIMTDADVDGAHIRTLLLTLFYRYMTPLINAGHIYIAQAPLYKVELNRKKYYFY 544
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
D EL++ + + SIQR+KGLGEM P QLWETT+NPE R L ++ +ED EA+ V
Sbjct: 545 SDEELEEFLKNNDGKKV-SIQRYKGLGEMNPDQLWETTMNPESRKLIKIEMEDVEEADRV 603
Query: 593 FSSLMGARVDTRKELIQNAANLV 615
F+ LMG+ V+ R+E I+ A ++
Sbjct: 604 FTILMGSEVEERREFIERHALMI 626
>gi|262039519|ref|ZP_06012821.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
gi|261746500|gb|EEY34037.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
Length = 660
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 324/645 (50%), Positives = 427/645 (66%), Gaps = 37/645 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN+VDEA AG NI V +L DN + V+DNGRGIP H
Sbjct: 25 MYIGSTSSRGLHHLVWEIVDNSVDEALAGVCDNIIVKILKDNVIEVSDNGRGIPFATHE- 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LE V+TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEVTV RDG Q
Sbjct: 84 TGKSTLEVVMTVLHAGGKF--DNDNYKVSGGLHGVGVSVVNALSEWLEVTVTRDGQIVRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG+PV+ + + S + GT +F D ++F T + ++ + + R++ELA+LN
Sbjct: 142 TYKRGEPVSDV--EKIGEASPEAHGTTTKFKADPEIFETTV-YEFSVLESRLKELAYLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD---------- 230
LTI L E D EK + ++ F GG+ +++ + D++ + D V + D
Sbjct: 199 GLTITLIDE-RDQEKIKEEKFLFEGGIIDFLNEI-ADEEKITDEVIYMSDTYEVEAAKEV 256
Query: 231 --VDG-------------ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 275
VD + +++A+ + + + + + N+I T +GGTH+ G + +LT
Sbjct: 257 EIVDDNGNTVKKMRAAKFVEVEIAMSYTI-SQRENVYSFVNNINTHEGGTHVSGFRTALT 315
Query: 276 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 335
RT+N + K+ VKDKD + G VREGL C+ISV++P P+FEGQTKT+LGN EV +V
Sbjct: 316 RTINDIAKQMNIVKDKDGTFQGTDVREGLVCVISVKIPEPQFEGQTKTKLGNSEVTGIVS 375
Query: 336 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 395
V L YLE HP + I+ K + +A AAK+AR+LV +K+ L SLPGKLADC
Sbjct: 376 NIVGNNLKFYLEDHPKEAEKIIEKMTMSKRAREAAKKARELVLRKNTLEVGSLPGKLADC 435
Query: 396 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 455
SS P ESEIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILNVE+ + +N EI+ +
Sbjct: 436 SSKDPSESEIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEKSGMHKLLENAEIRAM 495
Query: 456 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 515
I A G G G+D E LRYHKIII+TDADVDGAHIRTL+LTFFYR + L +EG IY+
Sbjct: 496 ITAFGAGF-GDDMDLEKLRYHKIIIMTDADVDGAHIRTLMLTFFYRQLRELINEGYIYIA 554
Query: 516 VPPLYKVERGKQVQYCYDDAELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPE 574
PPLYKV+ GK ++Y Y D ++KK+ S N Y+IQR+KGLGEM P QLWETTL+PE
Sbjct: 555 QPPLYKVQAGKAIKYAYSDEQMKKITSVLERDNRRYTIQRYKGLGEMNPEQLWETTLDPE 614
Query: 575 QRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 618
R L ++ +EDA+ A+ +F+ LMG +V+ R++ I+ AN V NLD
Sbjct: 615 VRTLLKVTMEDASYADKMFNILMGDKVEPRRQFIEENANYVRNLD 659
>gi|289422479|ref|ZP_06424322.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429727415|ref|ZP_19262187.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
gi|289157051|gb|EFD05673.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429152573|gb|EKX95391.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
Length = 635
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/620 (52%), Positives = 429/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG S I ++L D SV+V DNGRGIP+++HP
Sbjct: 26 MYIGSTGPRGLHHLVYEVVDNSIDEALAGNCSEIYISLNDDGSVTVRDNGRGIPVEVHPK 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S LETVLTVLHAGGKFGG S LHGVG+SVVNALS+ + V RDG Y Q
Sbjct: 86 TGLSTLETVLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSDWVVAEVSRDGKLYRQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G VT V+ + K+ GT I F PD +F + F + T+ R REL+FLN
Sbjct: 144 RYEKG--VTKTKLEVVDENQKE-SGTSITFMPDASIFDEVV-FSYETLEYRFRELSFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + EK++ + + GGL EYV++LN K LHD ++ K D TI+LA
Sbjct: 200 VIKIVFDDKRKGQEKSK--TFHYTGGLIEYVKYLNRTKNTLHDQIIYVDKMQDDCTIELA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +DAYS+ + +AN+I T +GG H+ G K +LT+ +N +++ +KDKD +L+GE
Sbjct: 258 LQY-TDAYSENIYSFANNINTHEGGVHLSGFKTALTKAMNDYARRNNILKDKDSNLTGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T I+SV++P P+FEGQTKT+LGN +R +VD E + ++E +P V I+ K
Sbjct: 317 IREGITAIVSVKLPEPQFEGQTKTKLGNTFMRGIVDSIANEEIGAFMEENPSVARVIIDK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L + +A AAK+AR+L R+KSVL ++SLPGKLADCS +PE+SEIF+VEGDSAGGSAK
Sbjct: 377 CLRSQRAREAAKKARELTRRKSVLETTSLPGKLADCSEKSPEKSEIFLVEGDSAGGSAKG 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + +EEI+N+I A G G+ GEDF + LRYHKII
Sbjct: 437 GRDRNIQAILPLRGKILNVEKSRLDKILSSEEIKNMITAFGCGI-GEDFDEAKLRYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L ++G +Y +PPL+K+++ K+ Y Y D EL
Sbjct: 496 IMTDADVDGAHIRTLLLTFFFRYMRPLIEQGYVYAAMPPLFKIKKAKKEYYAYTDRELGS 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ I R+KGLGEM QLWETT++PEQR+L+Q+ IEDA A+ FS LMG
Sbjct: 556 LLDEVGRQGT-EISRYKGLGEMNANQLWETTMDPEQRILQQVTIEDAIFADETFSMLMGD 614
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V R+E I +NA + NLD
Sbjct: 615 KVAPRREFIEENAKYVRNLD 634
>gi|448385291|ref|ZP_21563797.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
gi|445656786|gb|ELZ09618.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
Length = 643
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 303/615 (49%), Positives = 426/615 (69%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT+I+FWPD +F T + +T++ R+RELAFLN
Sbjct: 145 AFEGGEPVGDME-RVRDMEPDEETGTQIQFWPDTGIFETG-EMSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I LR +E++D Y + GG+ E+V++LN + +H DV+ F + I I+
Sbjct: 203 GVRITLRDEREETDDGDVVTETYEYDGGIREFVEYLNETRSAMHEDVIYFEDEEQSIQIE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L+G
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDNNLTG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +SI+
Sbjct: 322 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAESIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSA
Sbjct: 382 NKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 442 KQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ + +QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I+ A
Sbjct: 621 GDAVEPRKQFIKENA 635
>gi|51891144|ref|YP_073835.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
gi|51854833|dbj|BAD38991.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
Length = 638
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/623 (51%), Positives = 437/623 (70%), Gaps = 17/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHHL++EI+DNAVDE AG+ I V L +D SVSV+DNGRGIP+D+HP
Sbjct: 29 MYIGGTSQRGLHHLIWEIIDNAVDERLAGFCDKIVVTLHSDGSVSVSDNGRGIPVDIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ETV T+LHAGGKFGG + Y VSGGLHGVG +VVNALS L + V ++G Y
Sbjct: 89 TGISTVETVYTMLHAGGKFGGGA--YKVSGGLHGVGAAVVNALSRKLYIQVKQNGGVYEV 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++ G TL D+K+ GT +RFWPD ++F + ++FD I R+R+ AFLN
Sbjct: 147 EFANGGK--TLYPLRRVGDTKE-HGTYVRFWPDPEIFES-VEFDSEAIVTRLRDTAFLNQ 202
Query: 181 KLTIALRKEDSDPE-KNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
L I E + E + +YNE GL+ +VQ+LN ++PLH + K D ++L
Sbjct: 203 GLFIQFIDEKAGAEYRFKYNE-----GLQTFVQYLNRSREPLHAKPIYVFKATDTQEMEL 257
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +DAYS+ +L +AN+IRT++GGTH G+K +LTR +NS +K K +KD + +LSGE
Sbjct: 258 AIQY-TDAYSENILSFANNIRTVEGGTHETGLKTALTRVINSYARKYKLLKDNEDNLSGE 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+T I+SV++ P+FEGQTKT+LG+ E+ V +V E L+++LE +P + I+
Sbjct: 317 DIREGMTAILSVKLQEPQFEGQTKTKLGSSEMETFVAAAVSEGLSDFLEENPAIAKRIVE 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+LSA +A AA++AR+LVR+KS L ++LPGKL DC+S P ESE+F+VEGDSAGGSAK
Sbjct: 377 KALSAARAREAARKARELVRRKSALEITALPGKLTDCTSRDPSESELFLVEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR QA+LPLRGKILNVE+ + NEEI+ LI A+G G+ G+DF RYHK+
Sbjct: 437 MGRDRRIQAVLPLRGKILNVEKARLDKILSNEEIRTLITAVGAGI-GDDFDISKCRYHKV 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDG+HIRTLLLTFF+R+ + L + G +Y+ PPLY + +GKQV Y Y + E
Sbjct: 496 IIMTDADVDGSHIRTLLLTFFFRFMRPLIEAGYLYIASPPLYMIRKGKQVYYAYSEQEKD 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+V + QR+KGLGEM P QLWETT++P +R+L ++ +EDAAEA +F +LMG
Sbjct: 556 QVIARI-GGVTDKPQRYKGLGEMNPEQLWETTMDPSKRILYKVTMEDAAEATALFETLMG 614
Query: 599 ARVDTRKELIQNAANLV-NLDHL 620
+V+ R+E IQ A+LV NLD +
Sbjct: 615 EKVEPRREFIQRNAHLVQNLDTI 637
>gi|257875897|ref|ZP_05655550.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
gi|257810063|gb|EEV38883.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
Length = 649
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 317/624 (50%), Positives = 431/624 (69%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVIIEPDNSITVVDDGRGIPVDIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGK GY VSGGLHGVG SVVNALS +L+V V+++G Y+Q
Sbjct: 95 TGRPAVETVFTILHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTTLDVKVYKEGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L +D DR GT + F PD ++FT F+ + +A R+RELAFLN
Sbjct: 153 EYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIFTETTVFNFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED EK EY + GG++ YV+ LN K + D + + GIT++++
Sbjct: 209 GLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNASKTVIFPDPIYLEGEQQGITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y +L +AN+I T +GGTH G K +LTR +N +KSK +K+ D +L+GE
Sbjct: 267 MQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTRVINDYARKSKLMKENDENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ T++L +P+V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFTKFLMENPNVGRQVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA AAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GLLASKARQAAKRAREMTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVAKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNIHYIQPGKNAEQ 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK S P+ S+QR+KGLGEM QLWETT++PE RM+ ++ ++DA EA+ +F
Sbjct: 565 DLKNTIESLPATPKPSVQRYKGLGEMDDHQLWETTMDPENRMMLRVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|393809331|gb|AFN25839.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 320/619 (51%), Positives = 423/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRVLTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKVELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|420202666|ref|ZP_14708256.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
gi|394269207|gb|EJE13745.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
Length = 643
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 322/619 (52%), Positives = 422/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYAS+IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYASHIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF DK++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKQGVPQFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L+ E E+ + + Y + GG++ YV LN +K+PLH+ + + D I +++A
Sbjct: 208 GIQITLKDERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHEEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 LQYNS-GYGTNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K + +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKQELNPSPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|294495525|ref|YP_003542018.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
gi|292666524|gb|ADE36373.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
Length = 634
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 308/620 (49%), Positives = 430/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AGY ++I+V++ D SV+V D+GRGIP D+H
Sbjct: 27 MYIGSIDGRGLHHLVYEVVDNSIDEALAGYCTSIDVSINRDGSVTVRDDGRGIPTDIHSK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T+LHAGGKF SS Y VSGGLHGVG+SVVNALSE +V V R+G ++Q
Sbjct: 87 YKKSALEVVMTILHAGGKFDKSS--YKVSGGLHGVGVSVVNALSEWNDVEVHRNGKIFYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP+ V+ + GT + F PD +F T + F+ T+ R+RELAFLN
Sbjct: 145 RYVRGKPLD----DVIEKGDTESTGTSMTFKPDTDIFET-VDFNFETLVTRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I + + SD + EY GG+ +V++LN + LH+ + F ++ + +++A
Sbjct: 200 GIKIVITDKRSDEPLQEVFEY--DGGIVSFVEYLNKSRNVLHEQPIYFEREKEDTRVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + +AN+I T +GGTH+ G K++LTR N K + K DI LSG+
Sbjct: 258 MQY-TDSYGEYVYSFANNINTHEGGTHLAGFKSALTRVANDYAKSNNLAK-GDIKLSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL IISV++ +P+FEGQTKT+LGN E++ +VD V E L+E++E +P + +IL K
Sbjct: 316 IREGLAGIISVKLMDPQFEGQTKTKLGNSELKGIVDSMVSEGLSEFMEENPKIASAILQK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AAK+AR+L R+KS L S+LPGKLADCS P SEI++VEGDSAGGSAK
Sbjct: 376 AMDARRAREAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVSEIYLVEGDSAGGSAKM 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILP RGKILNVE+ A + KN EI +LI A+G G+ G+++ RYHK++
Sbjct: 436 GRDRRFQAILPFRGKILNVEKSRLARILKNNEILSLITAMGTGI-GDEYDLTKARYHKVV 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFF+RY L D G +Y+ PPLY +++GK ++ Y + E +
Sbjct: 495 IMTDADVDGAHIRTLMLTFFFRYMTPLIDAGYVYIAQPPLYSIKKGKNQRFAYTEREKDR 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + SIQR+KGLGEM P QLWETT+NP+ R + Q+ +EDA A+ +FS LMG
Sbjct: 555 IIEEIGEKGV-SIQRYKGLGEMNPDQLWETTMNPQTRTILQVTMEDAVAADEMFSVLMGD 613
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V R++ IQ +A +++NLD
Sbjct: 614 EVAPRRKFIQEHAKDVINLD 633
>gi|417643976|ref|ZP_12293998.1| DNA gyrase, B subunit [Staphylococcus warneri VCU121]
gi|445058376|ref|YP_007383780.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
gi|330685298|gb|EGG96959.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU121]
gi|443424433|gb|AGC89336.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
Length = 644
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 418/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA I V + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADEINVTIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTAIRFKADSSIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E + + Q + Y++ GG++ YV+ LN +K+P+H + + + D I +++A
Sbjct: 208 GIQITLTDERDEDDIRQ-DSYYYEGGIKSYVEMLNENKEPIHGEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + YS +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 267 IQY-NKGYSTNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGMNSKIIKEDKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 326 TREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPSVGRIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+
Sbjct: 446 GRDSSTQAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 565 LKAELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVTLEDAIDADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 IVENRRQFIEDNAVYANLD 643
>gi|134297887|ref|YP_001111383.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
gi|134050587|gb|ABO48558.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
Length = 638
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 435/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY I V + DNS++V DNGRGIP+DLHP
Sbjct: 30 MYIGSTSARGLHHLVYEVVDNSIDEALAGYCDKIIVTIQEDNSITVEDNGRGIPVDLHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLT+LHAGGKFGG S LHGVG+SVVNALS+ L V + R+G Y Q
Sbjct: 90 VGRPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSKYLSVEIKRNGKIYKQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG P T L V + GT++ F PD+++F + F T++ RIRELA+LN
Sbjct: 148 EYSRGIPTTELQI----VGNSKTTGTKVTFKPDEEIFEELV-FSLETLSQRIRELAYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L+ + DP Q +Y GG++++V+ LN +K+ +H + + + I +++A
Sbjct: 203 GIKIILQDKRKDPVAEQIFQY--DGGIKDFVKHLNRNKQTIHTKPIYVSGEKEQIVVEVA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ ML YAN+I T+DGGTH G+K +LTR +N G++ +K+ D +LSGE
Sbjct: 261 IQY-NDGYTENMLSYANNIHTVDGGTHEVGLKTALTRVINDYGRQHGVLKNNDANLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG T +ISV+VP P+FEGQTKT+LGN EVR +VD E L+ YL +P V I+ K
Sbjct: 320 IREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVDSIFAEKLSTYLVENPSVAKKIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A +A AA++AR+L R+KS L + SLPGKLADCS P SEI++VEGDSAGGSAKQ
Sbjct: 380 GITAARAREAARKARELTRRKSALETMSLPGKLADCSEKDPSVSEIYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPL+GKILNVE+ + NEEI+ +I A+G G+ GEDF RYHKI+
Sbjct: 440 GRERRFQAILPLKGKILNVEKARMDKILANEEIRAMITAMGTGI-GEDFDIAKARYHKIV 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLL+TFFYRY + L + G ++V PPLY+V +GK YCY D EL++
Sbjct: 499 IMTDADVDGAHIRTLLMTFFYRYMRQLIEAGYVFVAQPPLYRVRKGKHDSYCYSDNELEE 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDA EA+ FS LMG
Sbjct: 559 LLNRIGHDRV-NIQRYKGLGEMNPEQLWETTMDPDTRTMLQVTLEDAIEADATFSMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
RV+ R++ IQ NA + NLD
Sbjct: 618 RVEPRRDFIQENAKYVRNLD 637
>gi|346226422|ref|ZP_08847564.1| DNA gyrase subunit B [Anaerophaga thermohalophila DSM 12881]
Length = 656
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 309/627 (49%), Positives = 429/627 (68%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY ++I V + D S++V DNGRGIP+D H
Sbjct: 37 MYIGDLGQKGLHHLVYEVVDNSIDEALAGYCTSIVVTINEDGSITVVDNGRGIPVDFHEK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS +L+ V RDG Y Q
Sbjct: 97 EGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSSNLKAEVHRDGKIYRQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V + D+ GT I F PD +F I+F ++ +A R+RELAFLN
Sbjct: 155 EYQKGKPLAPIE----EVGTTDKTGTWITFMPDSSIFNN-IEFKYSILASRMRELAFLNS 209
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
L I L K + D E N +E F++ GL E+V +++ +++ L D + + + I +D
Sbjct: 210 GLEIILTDKREKDEEGNFKSERFYSENGLIEFVNFIDGNREKLIDEPIHISTEKNDIPVD 269
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++++ + Y N+I TI+GGTH+ G + LTRTL + +KS + ++G
Sbjct: 270 IAIVYNT-SFNENVYSYVNNINTIEGGTHLTGFRRGLTRTLKNWAEKSGMLSKLKFDING 328
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V L+ YLE +P +I
Sbjct: 329 DDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSLAVDQAVSTMLSNYLEENPKEAKAIA 388
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K + A A AA++AR+LV++KSVL LPGKLADCS PE++EIF+VEGDSAGG+A
Sbjct: 389 NKVILAATARHAARKARELVQRKSVLSGGGLPGKLADCSERDPEQAEIFLVEGDSAGGTA 448
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDRRFQAILPLRGKILNVE+ + +++N+EI+N+ ALG+ + E+ K E L
Sbjct: 449 KQGRDRRFQAILPLRGKILNVEKALQHKVFENDEIKNIFTALGVNIGTEEDSKALNIEKL 508
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+TDADVDG+HI TL++TFF+RY K L +G +Y+ PPLY +++GK +YC+
Sbjct: 509 RYHKIVIMTDADVDGSHIATLIMTFFFRYMKELIKKGYLYIATPPLYFLKKGKFEEYCWT 568
Query: 534 DAELKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
DA+ ++ + S IQR+KGLGEM QLW TT+NPE RML+Q+ E+AAEA+
Sbjct: 569 DAQRREFVEKYADGKEDSVHIQRYKGLGEMNSEQLWHTTMNPENRMLRQVTYENAAEADR 628
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVPPRREFIEKNATYANID 655
>gi|260891935|ref|YP_003238032.1| DNA gyrase subunit B [Ammonifex degensii KC4]
gi|260864076|gb|ACX51182.1| DNA gyrase, B subunit [Ammonifex degensii KC4]
Length = 636
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/622 (52%), Positives = 444/622 (71%), Gaps = 21/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYE++DN++DEA AG+ + IEV + DNSV V DNGRGIP+D+HP
Sbjct: 31 MYIGSTGPRGLHHLVYEVVDNSIDEALAGFCTEIEVVIKQDNSVLVKDNGRGIPVDIHPQ 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLT LHAGGKFGG S LHGVG+SVVNALSE LEV V R+G + Q
Sbjct: 91 AGRPAVEVVLTTLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWLEVEVHREGRIWRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG+PVT L + DR GT + F PD Q+F + F + + R+REL+FL P
Sbjct: 149 RFERGRPVTDLEA----IGETDRTGTTVHFKPDHQIFEEVV-FSQDYLTQRLRELSFLVP 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFF--AGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
++ I LR E + E+ F GGL ++V+ LN ++ LH D + + +G+ ++
Sbjct: 204 EVRIVLRDERTG------EEFVFHHKGGLRDFVRHLNRAREVLHPDPIYLAGEREGMVVE 257
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
ALQ+ D Y++++ YAN+IRT+DGGTH G KA+LTR +N G++ + + + L+G
Sbjct: 258 AALQY-HDGYAESIFSYANTIRTVDGGTHEAGFKAALTRVVNDYGRRHGIIPE-NFQLAG 315
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT +++V+VP+P+FEGQTKT+LGN +VR+VV+ V E L + E +P + I+
Sbjct: 316 EDVREGLTAVVAVKVPDPQFEGQTKTKLGNTQVRRVVESIVGEGLASFFEENPSIARLIV 375
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L+A +A AA+RAR+L R+K +L S+SLPGKLADCS P ++E++IVEGDSAGGSA
Sbjct: 376 EKALAAARAREAARRARELARRKGLLESTSLPGKLADCSERDPAKTELYIVEGDSAGGSA 435
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRRFQAILPLRGKILNVE+ + NEEI+ LI A+G G+ GED + +RYHK
Sbjct: 436 KQGRDRRFQAILPLRGKILNVEKARLDKILANEEIKALITAIGAGI-GEDLDLKKVRYHK 494
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFF+RY + L + G +Y+ PPLY+V +GK+ Y Y+DAEL
Sbjct: 495 LIIMTDADVDGAHIRTLLLTFFFRYMRPLIEAGYVYIAQPPLYRVRKGKESFYAYNDAEL 554
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ S+ N + +IQR+KGLGEM QLWETT+NPE+R++ Q+ +EDA A+ +FS+LM
Sbjct: 555 EKLLSTLGRNGV-TIQRYKGLGEMNAEQLWETTMNPEKRVILQVTLEDAVAADELFSTLM 613
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G +V+ R+E I A V NLD
Sbjct: 614 GDKVEPRREFISRYARYVRNLD 635
>gi|438000917|ref|YP_007270660.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|432177711|emb|CCP24684.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
Length = 640
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 432/621 (69%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY NI+V + DNSV+V D+GRGIP+ + P
Sbjct: 32 MYIGSTDSRGLHHLVYEVVDNSIDEAMAGYCKNIKVTINKDNSVTVEDDGRGIPVKIQPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE LT+LHAGGKF +S GY VSGGLHGVG+SVVNALS +EV V RDG ++Q
Sbjct: 92 VGKSALEVALTMLHAGGKF--NSGGYKVSGGLHGVGVSVVNALSSWMEVEVKRDGGIFYQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKPVT V+ + GT+I F PD ++F + F + + R+RE AFLN
Sbjct: 150 KYERGKPVT----DVIRKGDTEETGTKITFMPDNEIFEDTV-FSQDILTQRLREQAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L D N + + GG+ +V++LN + LH+ + D + +++A
Sbjct: 205 GIRIEL----FDERTGNSNVFHYEGGIVSFVKYLNRKRDVLHEKPIYMSAARDDMEVEVA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y +T+L +AN+I T +GGTH+ G + +LTR++N +K +K++D +LSGE
Sbjct: 261 MQY-NDSYLETVLTFANNINTHEGGTHLSGFRTALTRSMNDYMRKMNLLKEQDANLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ NP+FEGQTKT+LGN E+R +VD V E ++ +LE +P + I+ K
Sbjct: 320 VREGLTAVISVKLTNPQFEGQTKTKLGNSEIRSLVDTVVGEGISRFLEENPAIARVIVEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L ++LPGKLADC P E+++VEGDSAGGSAKQ
Sbjct: 380 ALGAARAREAARKARELTRRKTALEHTTLPGKLADCRERDPRLCELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + NEEI+++I ALG G+ GE+F E LRYHKII
Sbjct: 440 GRDPQIQAILPLRGKILNVEKARMDKILNNEEIRSMITALGTGI-GEEFDIEKLRYHKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++ DADVDGAHIRTLLLTFFYRY + L + G IY+ PPLY+V GK+ Y +DD EL K
Sbjct: 499 LMADADVDGAHIRTLLLTFFYRYMQPLIEAGKIYIAQPPLYRVVLGKKDYYAFDDLELSK 558
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ S S I+RFKGLGEM QLWETT+NPE R + ++ +EDA A+ +F+ LMG
Sbjct: 559 ILESLGNSRERAEIKRFKGLGEMAAEQLWETTMNPETRTILKVSLEDAVAADEIFTILMG 618
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R++ I ++AA + NLD
Sbjct: 619 DKVEPRRQFIFEHAAEVQNLD 639
>gi|393809325|gb|AFN25836.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 424/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V + YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQELEVYVHLNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|376259386|ref|YP_005146106.1| DNA gyrase subunit B [Clostridium sp. BNL1100]
gi|373943380|gb|AEY64301.1| DNA gyrase, B subunit [Clostridium sp. BNL1100]
Length = 642
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/628 (51%), Positives = 433/628 (68%), Gaps = 21/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + DNS++V DNG GIP+ +HP
Sbjct: 30 MYIGSTSSRGLHHLVYEIVANSVDEALAGRCDTIQVIVHKDNSITVTDNGSGIPVGIHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE V T+LHAGGKFG S YSVSGGLHGVG SVVNALSES+EV V R+G Y Q
Sbjct: 90 MGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGASVVNALSESMEVEVKREGHIYKQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKPVT++ V + GT F PD ++F I FD + + R RE+AFLN
Sbjct: 148 KYSRGKPVTSVEI----VGETEESGTITTFKPDPEIFED-IVFDFDAMITRYREMAFLNR 202
Query: 181 KLTIALRKEDSDP--EKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L E D EKN + + GG+ +V++LN K+PLHD V+ F D ++
Sbjct: 203 GIKIKLIDERPDEIIEKNLH----YEGGIISFVEYLNKTKEPLHDKVIYFEGTRDANIVE 258
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +D Y++T+ YAN+I T +GGTH+ G + ++T+ LN +K +K+ D +LSG
Sbjct: 259 VAMQY-NDNYNETVFSYANNIATTEGGTHLTGFRTAITKVLNDYARKFNIIKENDKNLSG 317
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT +ISV++P P+FEGQTKT+LGN E+R +V+ V + L +LE +P + IL
Sbjct: 318 EDVREGLTAVISVKLPEPQFEGQTKTKLGNSEIRTLVENVVSDKLNIFLEENPSIAKIIL 377
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
KSL+A +A AA++AR+L R+KS + SS+LPGKLADCS P ++EIFIVEGDSAGGSA
Sbjct: 378 DKSLTAARAREAARKARELTRRKSAMDSSTLPGKLADCSEKDPTKTEIFIVEGDSAGGSA 437
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDRR QAILPL GK+LNVE+ ++ NE++ +I ALG G+ G+DF LRY K
Sbjct: 438 KQGRDRRIQAILPLWGKMLNVEKSRLDKVFDNEKLAPVIIALGAGI-GDDFDTSKLRYDK 496
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+ DADVDG+HIR LLLTFF+RY + L ++G +Y+ +PPL+KV +GK+ Y YDD ++
Sbjct: 497 IIIMADADVDGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPLFKVYKGKEEFYAYDDRQV 556
Query: 538 KKV---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
K+ + + +IQRFKGLGEM P QLWETT++PE R + ++ ++DA A+ VFS
Sbjct: 557 TKIYEERGWRKDDPNVNIQRFKGLGEMNPDQLWETTMDPETRTIIKVDVQDAITADEVFS 616
Query: 595 SLMGARVDTRKELIQNAANLVNLDHLDI 622
MG +V+ RKE I A ++ +LDI
Sbjct: 617 MFMGEKVEPRKEYIHMHAK--DVTYLDI 642
>gi|402835705|ref|ZP_10884268.1| DNA gyrase, B subunit [Mogibacterium sp. CM50]
gi|402273987|gb|EJU23177.1| DNA gyrase, B subunit [Mogibacterium sp. CM50]
Length = 612
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/623 (50%), Positives = 434/623 (69%), Gaps = 17/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP GLHHLVYEI+DN+VDE+ AGY +I V + DNS++V D+GRG+P+D+HP
Sbjct: 1 MYIGSTGPAGLHHLVYEIVDNSVDESLAGYCKHITVTINEDNSITVTDDGRGMPVDVHPK 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E + T LHAGGKFG S GY VSGGLHGVG SVVNALS + V V R+G Y Q
Sbjct: 61 LGIPAVEVIHTQLHAGGKFG--SGGYKVSGGLHGVGASVVNALSTHMIVEVKRNGKLYRQ 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK VT L + + G++ FWPD ++F + F+++ + R+RE+AFLN
Sbjct: 119 EYKRGKTVTKLEV----IGTSKDTGSKTTFWPDPEIFDGTV-FEYDILQRRMREMAFLNK 173
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I++ ED K + + + GG+ E+VQ+LN +K +++ + F + DG +++A
Sbjct: 174 GLRISI--EDKREGKEKRESFHYEGGIIEFVQYLNKNKGVVNNKIFYFEYEKDGYEVEVA 231
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YS+ L YAN+I TI+GG H+ G +A+LTRT+N ++SK +K+ D SL GE
Sbjct: 232 MQY-TDRYSELTLSYANNINTIEGGFHLMGFRAALTRTVNDYARRSKILKENDDSLQGED 290
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV++ NP+FEGQTK +LGN EVR V+ ++ E L+ YL+ +P IL K
Sbjct: 291 VREGLTAIVSVKLTNPQFEGQTKAKLGNSEVRGFVESNMNENLSFYLDENPKEAKLILDK 350
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR++ R+ SVL ++SLPGKLADCS P SEIF+VEGDSAGGSAK
Sbjct: 351 CLKAARAREAARKAREITRKTSVLETTSLPGKLADCSEKDPALSEIFLVEGDSAGGSAKS 410
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+ QA+LPLRGKI+NVE+ + ++EI+N+I A G GV G +F + LRYHKII
Sbjct: 411 GRDRKRQAVLPLRGKIINVEKARADRILNSDEIKNMITAFGCGV-GSNFDIDKLRYHKII 469
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLTFFYR+ L ++G +Y PPL++V++GK++ Y Y DAE
Sbjct: 470 IMTDADVDGAHIRTLLLTFFYRFMTPLIEKGYVYAAQPPLFRVKQGKEIHYTYSDAEQDK 529
Query: 537 -LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L ++K+ S + IQR+KGLGEM QLWETT++ R L Q+ IEDA A+ +F++
Sbjct: 530 LLAELKAHNKSTKI-EIQRYKGLGEMDFNQLWETTMDYNHRTLVQIKIEDATAADEIFTT 588
Query: 596 LMGARVDTRKELIQNAANLVNLD 618
LMG +V RK+ I++ A LD
Sbjct: 589 LMGDKVPPRKKFIEDNARYATLD 611
>gi|393809335|gb|AFN25841.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 424/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V + YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHLNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|314934956|ref|ZP_07842315.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
gi|313652886|gb|EFS16649.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
Length = 644
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 423/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 35 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V+R+ YHQ
Sbjct: 95 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVYRNDTIYHQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 153 AYKKGVPQFDLK----EIGETDQTGTAIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E + + Y + GG++ YV+ LN +K+PLH+ + + D I +++A
Sbjct: 209 GIQITLRDEREEEGRED--SYHYEGGIKSYVELLNENKEPLHEEPIYIHQTKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 267 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRILNSYGIQSKIIKEDKDKLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+ EY +L HP V I+ K
Sbjct: 326 TREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFAEYFERFLFEHPAVGRIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 565 LKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|223043343|ref|ZP_03613389.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|417906712|ref|ZP_12550492.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
gi|222443132|gb|EEE49231.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|341597523|gb|EGS40077.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
Length = 639
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/619 (52%), Positives = 420/619 (67%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V+R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVYRNDTIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EIGETDQTGTAIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E + + Y + GG++ YV+ LN +K+PLH+ + + D I +++A
Sbjct: 204 GIQITLRDEREEEGRED--SYHYEGGIKSYVELLNENKEPLHEEPIYIHQTKDDIEVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 262 LQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRILNSYGIQSKIIKEDKDKLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+ EY +L HP V I+ K
Sbjct: 321 TREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFAEYFERFLFEHPAVGRIIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 381 GVMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 441 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 560 LKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 619
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 620 VVENRRQFIEDNAVYANLD 638
>gi|325567637|ref|ZP_08144304.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|420261794|ref|ZP_14764438.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
gi|325159070|gb|EGC71216.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|394771728|gb|EJF51489.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
Length = 649
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/624 (50%), Positives = 432/624 (69%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVIIEPDNSITVVDDGRGIPVDIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGK GY VSGGLHGVG SVVNALS +L+V V+++G Y+Q
Sbjct: 95 TGRPAVETVFTILHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTTLDVKVYKEGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L +D DR GT + F PD ++FT +F+ + +A R+RELAFLN
Sbjct: 153 EYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIFTETTEFNFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED EK EY + GG++ YV+ LN K + D + + GIT++++
Sbjct: 209 GLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNASKTVIFPDPIYLEGEQQGITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y +L +AN+I T +GGTH G K +LTR +N +KSK +K+ D +L+GE
Sbjct: 267 MQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTRVINDYARKSKLMKENDENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ T++L +P+V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFTKFLMENPNVGRQVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA AAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GLLASKARQAAKRAREMTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVAKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNIHYIQPGKNAEQ 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK S P+ ++QR+KGLGEM QLWETT++P+ RM+ ++ ++DA EA+ +F
Sbjct: 565 DLKNTIESLPATPKPTVQRYKGLGEMDDHQLWETTMDPDNRMMLRVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|393408286|emb|CCI10030.1| topoisomerase II subunit B [Staphylococcus hominis]
gi|393809319|gb|AFN25833.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809321|gb|AFN25834.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809329|gb|AFN25838.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 424/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+ +HD + + D I +++A
Sbjct: 208 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKESIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|414160151|ref|ZP_11416422.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878801|gb|EKS26671.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
Length = 639
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 417/619 (67%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADTIEVIIEKDNWIRVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE+LEV V R+ Y+Q
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSETLEVFVHRNNKIYNQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P L V + GT IRF D ++FT + + + RIRELAFLN
Sbjct: 148 AYKRGVPQYDLKV----VGETEHTGTEIRFKADPEIFTETTTYQYELLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-VDGITIDLA 239
+ + LR E + K + Y + GG++ YV+ +N +K+PL D + D D + +++A
Sbjct: 204 GIQLTLRDERGEEVKE--DSYHYEGGIKSYVELINENKEPLFDEPVYLHDRKDDVEVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S +S +L YAN+I T +GGTH +G K +LTR LNS G + +KD LSGE
Sbjct: 262 LQYNS-GFSTNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGIQQGIMKDDKERLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E + +L HP V I+ K
Sbjct: 321 TREGLTAVVSIKHSNPQFEGQTKTKLGNSEVRQIVDRLFTEDMERFLLEHPQVARIIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIFIVEGDSAGGS K
Sbjct: 381 GMMASRARIAAKKAREVTRRKSALEVSSLPGKLADCSSKNPEESEIFIVEGDSAGGSTKL 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+++I A G G+ GE+F RYHKI+
Sbjct: 441 GRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRSMITAFGTGI-GEEFDISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNERELEK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA EA++ F LMG
Sbjct: 560 LKSELKPTPKWSIARYKGLGEMDADQLWETTMNPEHRSMLQVTLEDAIEADLTFEMLMGD 619
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I+ A NLD
Sbjct: 620 VVENRRQFIEENAVYANLD 638
>gi|332798030|ref|YP_004459529.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|332695765|gb|AEE90222.1| DNA gyrase, B subunit [Tepidanaerobacter acetatoxydans Re1]
Length = 635
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 432/621 (69%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY NI+V + DNSV+V D+GRGIP+ + P
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEAMAGYCKNIKVTINKDNSVTVEDDGRGIPVKIQPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE LT+LHAGGKF +S GY VSGGLHGVG+SVVNALS +EV V RDG ++Q
Sbjct: 87 VGKSALEVALTMLHAGGKF--NSGGYKVSGGLHGVGVSVVNALSSWMEVEVKRDGGIFYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKPVT V+ + GT+I F PD ++F + F + + R+RE AFLN
Sbjct: 145 KYERGKPVT----DVIRKGDTEETGTKITFMPDNEIFEDTV-FSQDILTQRLREQAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L D N + + GG+ +V++LN + LH+ + D + +++A
Sbjct: 200 GIRIEL----FDERTGNSNVFHYEGGIVSFVKYLNRKRDVLHEKPIYMSAARDDMEVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y +T+L +AN+I T +GGTH+ G + +LTR++N +K +K++D +LSGE
Sbjct: 256 MQY-NDSYLETVLTFANNINTHEGGTHLSGFRTALTRSMNDYMRKMNLLKEQDANLSGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ NP+FEGQTKT+LGN E+R +VD V E ++ +LE +P + I+ K
Sbjct: 315 VREGLTAVISVKLTNPQFEGQTKTKLGNSEIRSLVDTVVGEGISRFLEENPAIARVIVEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L ++LPGKLADC P E+++VEGDSAGGSAKQ
Sbjct: 375 ALGAARAREAARKARELTRRKTALEHTTLPGKLADCRERDPRLCELYLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + NEEI+++I ALG G+ GE+F E LRYHKII
Sbjct: 435 GRDPQIQAILPLRGKILNVEKARMDKILNNEEIRSMITALGTGI-GEEFDIEKLRYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++ DADVDGAHIRTLLLTFFYRY + L + G IY+ PPLY+V GK+ Y +DD EL K
Sbjct: 494 LMADADVDGAHIRTLLLTFFYRYMQPLIEAGKIYIAQPPLYRVVLGKKDYYAFDDLELSK 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ S S I+RFKGLGEM QLWETT+NPE R + ++ +EDA A+ +F+ LMG
Sbjct: 554 ILESLGNSRERAEIKRFKGLGEMAAEQLWETTMNPETRTILKVSLEDAVAADEIFTILMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R++ I ++AA + NLD
Sbjct: 614 DKVEPRRQFIFEHAAEVQNLD 634
>gi|224477952|ref|YP_002635558.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222422559|emb|CAL29373.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 640
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/619 (51%), Positives = 418/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADKIEVIIEKDNWIRVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ Y+Q
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNNKIYNQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P L + + GT IRF D ++FT + + + RIRELAFLN
Sbjct: 148 AYKRGIPQYDLKV----IGETEHNGTEIRFKADPEIFTETTTYQYEVLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-VDGITIDLA 239
+ I+LR E D + + + Y + GG++ YV+ LN +K+PL D + D D + +++A
Sbjct: 204 GIQISLRDE-RDEDNIREDSYHYEGGIKSYVELLNENKEPLFDEPVYVHDRKDDVEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S ++ +L YAN+I T +GGTH +G K +LTR LNS G KS +K+ LSGE
Sbjct: 263 IQYNS-GFTTNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTKSGLIKEDKERLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T I+S++ +P+FEGQTKT+LGN EVR++VD+ E + +L HP V I+ K
Sbjct: 322 TREGMTAIVSIKHEDPQFEGQTKTKLGNSEVRQIVDRLSAEDMERFLYEHPQVARIIIEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 382 GLMASRARIAAKKAREVTRRKSALEVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKL 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKSRLDRILNNNEIRSMITAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNERELEK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA EA+ F LMG
Sbjct: 561 LKSELKPTPKWSISRYKGLGEMDADQLWETTMNPEHRSMLQVTLEDAIEADTTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|330507223|ref|YP_004383651.1| DNA gyrase subunit B [Methanosaeta concilii GP6]
gi|328928031|gb|AEB67833.1| DNA gyrase, B subunit [Methanosaeta concilii GP6]
Length = 630
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 434/620 (70%), Gaps = 19/620 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLVYE++DN+VDEA G+ S I+V + SVS+ D+GRGIP+D HP
Sbjct: 27 MYIGSTDSLGLHHLVYEVVDNSVDEALGGFCSEIDVTINPGGSVSIRDDGRGIPVDNHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N+ ALE VLTVLHAGGKF S Y VSGGLHGVG+SVVNALSE +EV V R+G Y Q
Sbjct: 87 FNRPALEIVLTVLHAGGKFDHES--YGVSGGLHGVGVSVVNALSEWMEVQVRRNGRIYWQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +GK V+ L S D GT I F PD +F +F +T++ R+RELAFLN
Sbjct: 145 RFEKGKVVSDLEER----GSSDHTGTTITFKPDTSIFEET-EFSFDTLSSRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
L I ++ + SD E N + +AGG+ +V++LN +K+ LH+ V F + +G +++A
Sbjct: 200 GLKITIKDDRSDKE----NIFQYAGGIISFVEYLNKNKEVLHEQPVYFSRSKNGTQVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +++Y++ + YAN I T +GGTH+ G +A+LTRT+N + +K K+ ++ L GE
Sbjct: 256 LQY-NNSYAENIFSYANIINTREGGTHLMGFRAALTRTVNDYARNNKLFKN-EMKLGGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL +ISV++P+P+FEGQTKTRLGN +R +V+ V E L EY E +P V +I+ K
Sbjct: 314 LREGLVAVISVKLPDPQFEGQTKTRLGNSSIRGIVESMVAEGLGEYFEENPLVATTIVEK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A++A AA++A++L R+K+ L S LPGKLADCS P + EI+IVEG+SAGGSAKQ
Sbjct: 374 AAEAMRAREAARKAKELTRRKNALSSGGLPGKLADCSDNDPAKCEIYIVEGESAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVER + KN EI+N+I A G GV G+DF RYHK++
Sbjct: 434 GRNRHFQAILPLRGKILNVERARLDKILKNAEIRNMIVAFGTGV-GDDFDISKARYHKVV 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L D G +++ PPLY+V++GKQ Y Y D +L +
Sbjct: 493 IMTDADVDGSHIRTLLLTFFYRYMRPLIDAGYVFIAQPPLYQVKKGKQANYAYSDEQLNE 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + IQR+KGLGEM P QLWETT++PE R++ ++ +EDA EA+ +F+ LMG
Sbjct: 553 LVAGMNKPV---IQRYKGLGEMNPEQLWETTMDPEGRIMLRVTLEDAVEADRIFTILMGD 609
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 610 QVEPRREFIEKHAKYVKNLD 629
>gi|257866280|ref|ZP_05645933.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257873204|ref|ZP_05652857.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
gi|257800238|gb|EEV29266.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257807368|gb|EEV36190.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
Length = 649
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/624 (50%), Positives = 431/624 (69%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFASSIQVIIEPDNSITVVDDGRGIPVDIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGK GY VSGGLHGVG SVVNALS +L+V V+++G Y+Q
Sbjct: 95 TGRPAVETVFTILHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTTLDVKVYKEGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L +D DR GT + F PD ++FT F+ + +A R+RELAFLN
Sbjct: 153 EYHRGAVVDDLKV----IDETDRHGTTVHFVPDPEIFTETTVFNFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED EK EY + GG++ YV+ LN K + D + + GIT++++
Sbjct: 209 GLKISI--EDKREEKPVLKEYHYDGGIKSYVEHLNASKTVIFPDPIYLEGEQQGITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y +L +AN+I T +GGTH G K +LTR +N +KSK +K+ D +L+GE
Sbjct: 267 MQY-TDSYHSNLLSFANNIHTYEGGTHEFGFKTALTRVINDYARKSKLMKENDENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ T++L +P+V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFTKFLMENPNVGRQVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA AAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GLLASKARQAAKRAREMTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVAKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNIHYIQPGKNAEQ 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK S P+ ++QR+KGLGEM QLWETT++PE RM+ ++ ++DA EA+ +F
Sbjct: 565 DLKNTIESLPATPKPTVQRYKGLGEMDDHQLWETTMDPENRMMLRVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|78707355|gb|ABB46483.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 310/613 (50%), Positives = 409/613 (66%), Gaps = 15/613 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L + V DNGRGIP+D+HP
Sbjct: 25 MYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILKGEVIRVTDNGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y Q
Sbjct: 85 TKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + D+ GT I F D +FT + +++ T+ RI++LAFLN
Sbjct: 143 KYERGIPAYDLKIK----GNTDKTGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + L D E+++ + + GG+ EYV++LN K +H D++ K+ DGIT++LA
Sbjct: 199 GLKLNLI--DDRFEESKIESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ D+YS + + N+I T +GG H +G K +LTR ++ K KD S+SGE
Sbjct: 257 MQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K
Sbjct: 314 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPTQAKAIVEK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 374 VLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+
Sbjct: 434 GRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIV 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL +
Sbjct: 493 IMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNE 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG
Sbjct: 553 ILKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGE 610
Query: 600 RVDTRKELIQNAA 612
V+ RKE IQN A
Sbjct: 611 EVEPRKEFIQNNA 623
>gi|357060838|ref|ZP_09121602.1| B subunit [Alloprevotella rava F0323]
gi|355375671|gb|EHG22954.1| B subunit [Alloprevotella rava F0323]
Length = 653
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/630 (49%), Positives = 428/630 (67%), Gaps = 20/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE +DN++DEA AGY ++IEV + DNS+ V DNGRGIP+D+HP
Sbjct: 31 MYIGDTGERGLHHLVYETVDNSIDEALAGYCTHIEVTICEDNSIVVQDNGRGIPVDMHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 EHRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ ++ V + +GTR +FWPD VF+T +++ T++ R+RELA+LN
Sbjct: 149 EYEKGKPLYSVKV----VGETELRGTRQQFWPDDTVFSTTT-YNYETLSNRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKN-QYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
L I L D E N + E+F GL ++V++L++ + L D V+ + +G+ ID+
Sbjct: 204 GLKITLTDLRQDDEGNIRQQEFFSEQGLPQFVRYLDSSRSHLFDDVIHISTNKNGLPIDV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTVKDKDISLS 296
A+ + + Y++ + Y N+I TI+GGTH+ G + +LTR L + +++ K ++ I +S
Sbjct: 264 AVMY-NTGYAENIHSYVNNINTIEGGTHLTGFRQALTRVLKNYAEQTAAKQIEKAKIEIS 322
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE REGLT +ISV+V P+FEGQTKTRLGN EV V+Q+V E T YLE HP I
Sbjct: 323 GEDFREGLTAVISVKVAEPQFEGQTKTRLGNSEVTGAVNQAVGEAFTNYLEEHPKEAKLI 382
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A +AA++AR+ V++KS L LPGKLADCSS E E+F+VEGDSAGGS
Sbjct: 383 VDKVILAATARIAARKARESVQRKSPLTGGGLPGKLADCSSKDAAECELFLVEGDSAGGS 442
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE--DFKKEA 472
AKQGR RR QAILPLRGKILNVE+ ++++E+ N+I+A+G+ G+ GE + E
Sbjct: 443 AKQGRSRRTQAILPLRGKILNVEKAMWHKAFESDEVNNIIQAMGVRFGLDGESKEANIEK 502
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY--KVERGKQVQY 530
LRYHKIII+ DADVDG HI TL++T FYRY L ++G +Y+ +PPLY K ++G Y
Sbjct: 503 LRYHKIIIMADADVDGQHIATLIMTLFYRYMPQLIEDGYLYIAMPPLYRCKSKKGNHEDY 562
Query: 531 CYDD-AELKKVKS-SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 588
CY++ A L+ +K S QR+KGLGEM P QLWETT+NPE R+LKQ+ +E+A+
Sbjct: 563 CYNEQARLQFIKDYGDGSEENIVTQRYKGLGEMNPSQLWETTMNPETRLLKQVTLENASN 622
Query: 589 ANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A+ FS LMG V R+E I+ A N+D
Sbjct: 623 ADFTFSMLMGEDVGPRREFIERNATYANID 652
>gi|440782434|ref|ZP_20960451.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
gi|440219958|gb|ELP59167.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
Length = 636
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/624 (50%), Positives = 437/624 (70%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYEI+DN++DEA AG+ NI V + DNSVSV D+GRG+P+ +H
Sbjct: 28 MYIGSTSLKGLHHLVYEIVDNSIDEALAGFCKNINVVIHKDNSVSVTDDGRGMPVGIHHK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NK +E ++TVLHAGGK GY VSGGLHGVG SVVNALSE+ EV V R+G + Q
Sbjct: 88 MNKPTVEVIMTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSETCEVIVKREGHIWRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG + + + GT+I F PD ++F I+F+++T+A R+RELAFLN
Sbjct: 146 MYHRGNVASPFE----KIGDTEEHGTKINFKPDPEIFDE-IEFNYDTLAQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I E D ++ + + GG++ +V +LN +K+P+ + G++ + +
Sbjct: 201 GIKINFVDERQDKKE----VFHYEGGIKSFVSYLNRNKEPIFPEPIYIEGYKNEY---MV 253
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR LN +K +K+ D + S
Sbjct: 254 EIALQY-NDGYAENLFSFANNIDTVEGGTHLSGFKTALTRVLNDYARKFNFIKENDKNFS 312
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT ++SV++P+P+FEGQTKT+LGN EVR +VD + E ++ +LE +P + I
Sbjct: 313 GEDIREGLTAVVSVKLPDPQFEGQTKTKLGNSEVRGIVDSILGENVSAFLEENPQIAKII 372
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A +A AAK+AR+L R+KSVL +++LPGKLADCSS P E EI+IVEGDSAGGS
Sbjct: 373 IDKAMLASRARDAAKKARELTRRKSVLETTALPGKLADCSSKDPAECEIYIVEGDSAGGS 432
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKI+NVE++ + +E I+ +I A G G+ +DF E +RYH
Sbjct: 433 AKQGRDRRFQAILPLRGKIMNVEKQRIDKILNSEMIRAMITAFGAGI-SKDFNIEKIRYH 491
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYKV +GK+ YCY + E
Sbjct: 492 RIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLYKVSKGKKEIYCYLEEE 551
Query: 537 LKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L K + SIQR+KGLGEM QLWETT++PE+R+L + +EDA A+ +F+
Sbjct: 552 LDKALEELGGKDNNTSIQRYKGLGEMNAEQLWETTMDPERRILLKATVEDAMAADEIFTI 611
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+E I QNA N+VNLD
Sbjct: 612 LMGDKVEPRREFIQQNAKNVVNLD 635
>gi|21675071|ref|NP_663136.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
gi|21648310|gb|AAM73478.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
Length = 647
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 426/620 (68%), Gaps = 18/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYEI+DNA+DE AGY I VA+ D SV+V D+GRGIP+D+HP
Sbjct: 36 MYIGDIHSRGLHHLVYEIVDNAIDETLAGYNDYIHVAMNPDGSVTVTDHGRGIPVDIHPV 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG + Q
Sbjct: 96 KKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKIFRQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V + + D++GT++ F PD ++F +F + I R+RELAFLN
Sbjct: 154 TYRRGVP----QGGVEEIGTTDQRGTKVTFKPDPEIFKIT-EFRKDIILDRMRELAFLNS 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLA 239
L I ++ D E N+ + + GGL+E+V+++++++ L + + + D +++A
Sbjct: 209 NLRIIVQ----DAEGNE-EIFHYEGGLKEFVRFIDSNRLSLLKEPIFLSGERDSTMVEIA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ I+L+G+
Sbjct: 264 LQY-NDSYQENIFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNVKITLTGDD 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+EGLT +ISV+VP P+FEGQTKT+LGN E + +V+ V E L E+ E +P L I+ K
Sbjct: 323 FKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVETIVNEQLAEFAESNPGTLKLIIEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SA + AA++A++L R+KSVL SS LPGKLADCS P+ E++IVEGDSAGGSAKQ
Sbjct: 383 VKSAAISREAARKAKELTRRKSVLESSGLPGKLADCSINDPDHCELYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG + E+F E LRY KII
Sbjct: 443 GRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSIGEEEFSPEKLRYGKII 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLTFF+RY ++L + G +++ PPLY V+ G++ QY +D+ E
Sbjct: 503 IMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLVKSGREQQYAWDEDERLS 562
Query: 537 -LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++++K A SIQR+KGLGEM P QLW TT++P R L Q+ +E+A EA+ VFS+
Sbjct: 563 IVEQMKKLQKGKANVSIQRYKGLGEMNPEQLWSTTMDPAHRSLLQVTVENAMEADQVFST 622
Query: 596 LMGARVDTRKELIQNAANLV 615
LMG +V+ R++ I+ A V
Sbjct: 623 LMGDKVEPRRDFIEKNARYV 642
>gi|189345573|ref|YP_001942102.1| DNA gyrase subunit B [Chlorobium limicola DSM 245]
gi|189339720|gb|ACD89123.1| DNA gyrase, B subunit [Chlorobium limicola DSM 245]
Length = 643
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 414/620 (66%), Gaps = 18/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYEI+DN++DE GY I V L D SV+V D GRGIP+D+HP
Sbjct: 32 MYIGDIHTRGLHHLVYEIVDNSIDETLGGYNDYIFVGLNPDGSVTVIDRGRGIPVDIHPE 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG Y Q
Sbjct: 92 KQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAYFQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D +GT+ F PD ++F T +F + I R+RELAFLN
Sbjct: 150 RYERGVP----QGDVKEIGPSDLRGTKTTFKPDHEIFKTT-EFRRDIIIDRMRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLA 239
L I ++ D + E + + GGL E+VQ+ + ++ K L + V + D ++LA
Sbjct: 205 TLRITVQDSDGNEEV-----FHYEGGLNEFVQFTDQNRIKLLKEPVYIYGERDSTIVELA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL+G+
Sbjct: 260 LQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLSLTGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V E L E+LE +P+VL I+ K
Sbjct: 319 FKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESIVNEQLAEFLESNPNVLKLIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQ
Sbjct: 379 VKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KII
Sbjct: 439 GRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSPEKLRYGKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY ++L + G +++ PPLY V+ GK QY +DD E
Sbjct: 499 IMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLVKSGKDQQYAWDDDERNA 558
Query: 540 VKSSF----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
V S A IQR+KGLGEM P QLW TT++P R L Q+ +E+A EA+ VFS+
Sbjct: 559 VIESLRKMQKGKANVHIQRYKGLGEMNPEQLWSTTMDPAHRSLLQVSVENAMEADKVFST 618
Query: 596 LMGARVDTRKELIQNAANLV 615
LMG +V+ R++ I+ A V
Sbjct: 619 LMGDKVEPRRDFIEKNARYV 638
>gi|325288206|ref|YP_004264387.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
gi|324963607|gb|ADY54386.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
Length = 645
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/625 (50%), Positives = 431/625 (68%), Gaps = 25/625 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ N+EV + DNS++V DNGRGIP+D+HP
Sbjct: 38 MYIGSTTSRGLHHLVYEIVDNSIDEAMAGFCDNVEVTIHNDNSITVKDNGRGIPVDIHPK 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E +T+LHAGGKF G + Y VSGGLHGVG+SVVNALSE L+V V +G+ Y Q
Sbjct: 98 MKKPAVEVAMTILHAGGKFSGDA--YKVSGGLHGVGMSVVNALSEWLKVEVKINGIRYQQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRGKP+ L K R GT+I F PD Q+F I +D+ + R++EL+FLN
Sbjct: 156 EYSRGKPLYDLKE---AGTYKGRTGTQISFKPDAQIFEDVI-YDYEVLEQRLKELSFLNK 211
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGI 234
+ IAL+ E + E F +GG+ +YV++LN +K KP++ F +
Sbjct: 212 NIGIALKDERTGA-----GELFKHSGGIVDYVKYLNRNKDAIQPKPIY----FEAQKEEN 262
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A Q+ +D YS+ + YAN+I T +GGTH G KA+LTR +N +K+ +K + +
Sbjct: 263 IVEIAFQY-NDGYSENIYSYANNINTTEGGTHEAGFKAALTRVINDYARKNNILKANENN 321
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
LSGE VREGLT IISV+V P+FEGQTKT+LGN E+R +VD + + L+ + E +P V
Sbjct: 322 LSGEDVREGLTAIISVKVREPQFEGQTKTKLGNSEMRSIVDSILGDGLSTFCEENPSVAK 381
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ K L A +A +AA++ARDL R+K+ L S+SLPGKLADC+ + EI++VEGDSAG
Sbjct: 382 KIVEKGLQATRARMAARKARDLTRRKNALDSTSLPGKLADCAWKEAQFCEIYLVEGDSAG 441
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRD++FQAILPLRGKILNVE+ + NEEI+ +I A+G G+ +DF E R
Sbjct: 442 GSAKQGRDQKFQAILPLRGKILNVEKARLDRILANEEIRAMITAMGTGI-SDDFNLEKAR 500
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y+KI+I+TDADVDG+HIR LLLTFFYRY K L + +Y+ PPL+++++GK++QY Y D
Sbjct: 501 YNKIVIMTDADVDGSHIRILLLTFFYRYMKPLLENNYVYIAQPPLFQIKKGKEIQYAYSD 560
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL + + IQR+KGLGEM P QLWETT+NPE R + Q+ +EDA A +F+
Sbjct: 561 EELNHILEMIGRERV-EIQRYKGLGEMNPEQLWETTMNPETRTILQVKMEDARRAEELFT 619
Query: 595 SLMGARVDTRKELIQN-AANLVNLD 618
MG +VD RKE IQ A ++ NLD
Sbjct: 620 IFMGDKVDPRKEYIQKYAKDVKNLD 644
>gi|239637290|ref|ZP_04678277.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
gi|239597127|gb|EEQ79637.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
Length = 640
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 417/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA I V + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADEINVTIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EIGSTDKTGTAIRFKADSSIFTETTVYNYETLQQRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E + + Q + Y + GG++ YV+ LN +K+P+H + + + D I +++A
Sbjct: 204 GIQITLTDERDEDDIRQ-DSYHYEGGIKSYVEMLNENKEPIHGEPIYIHQSKDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + YS +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 263 IQY-NKGYSTNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGMNSKIIKEDKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 322 TREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPSVGRIIVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K
Sbjct: 382 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+
Sbjct: 442 GRDSSTQAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 561 LKAELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVTLEDAIDADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|350565207|ref|ZP_08933993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
gi|348663986|gb|EGY80513.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
Length = 640
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/621 (50%), Positives = 442/621 (71%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYEI+DN++DEA AG S I + + D SVSV+D+GRGIP D+HP
Sbjct: 28 MYIGSTGSKGLHHLVYEIVDNSIDEALAGRCSEITIEIEKDGSVSVSDDGRGIPTDIHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF S+ Y VSGGLHGVG+SVVNALS L TV R+G + Q
Sbjct: 88 TKKSTVETVLTILHAGGKF--SNDAYKVSGGLHGVGVSVVNALSTKLTATVKREGKIHQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+SRG P + L ++ ++ GT+I F PD ++F T I F+ + ++ R RE+AFLN
Sbjct: 146 TFSRGIPTSEL--EIIGKVAESDTGTKISFSPDPEIFDTLI-FEWDILSKRFREMAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I R D EK + Y + GG++ +V+++N K P+H ++V ++ D +++A
Sbjct: 203 GVRINFR--DYREEKVREEVYHYEGGIKSFVEYINRKKTPIHKEIVYIDQEKDKTLVEIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +DAYS+ ++ +AN+I T +GG+H+ G +++LTRT+N G+K +K+K+ +LSG+
Sbjct: 261 IQY-TDAYSENVISFANNINTEEGGSHLSGFRSALTRTINEYGRKYNIIKEKEENLSGDD 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGL+ +ISV++PNP+FEGQTK +LGN E R +VD V + LT++LE +P V IL K
Sbjct: 320 VREGLSAVISVKLPNPQFEGQTKAKLGNSETRGIVDSVVSDVLTDFLEENPKVGKLILDK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+LSA +A AA+RARDL R+K++L + LPGKL+DC + E +EIF+VEG+SAGGSA +
Sbjct: 380 ALSARRAREAARRARDLSRKKNMLDAMPLPGKLSDCQLSDNENTEIFLVEGNSAGGSAVE 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RD FQAILPLRGKI+NVE+ M ++EI+ +I A G G+ G+DF E LRY+KI+
Sbjct: 440 ARDSVFQAILPLRGKIMNVEKARLDKMLASDEIKAMITAFGTGI-GQDFNIENLRYNKIV 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELK 538
I+TDADVDGAHI TLLLTFF+RY + L ++G +YV PPL+ + +G K ++Y YD+ ELK
Sbjct: 499 IMTDADVDGAHIMTLLLTFFFRYMRPLIEQGHVYVAQPPLFGILKGNKPLKYVYDELELK 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K + Y I+R+KGLGEM LWETT++PE+R+L ++ IEDA EA+ FS LMG
Sbjct: 559 KSLEELGRDKKYDIKRYKGLGEMNAEDLWETTMDPEKRVLLKIDIEDAVEADETFSILMG 618
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+ V+ R+E I +NA N+D
Sbjct: 619 SDVEPRREFIEENALFAENID 639
>gi|325299173|ref|YP_004259090.1| DNA gyrase subunit B [Bacteroides salanitronis DSM 18170]
gi|324318726|gb|ADY36617.1| DNA gyrase, B subunit [Bacteroides salanitronis DSM 18170]
Length = 654
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/629 (49%), Positives = 418/629 (66%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMITNVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+ GKP+ V V + D GTR FWPD +FT ++ +N + R+RELA+LN
Sbjct: 151 EYACGKPLYP----VKEVGTTDITGTRQTFWPDASIFTVT-EYKYNILQARMRELAYLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L + E Y + F G++E+V++LN+ PL DV+ + G+ I+
Sbjct: 206 GITITLTDKREKEEDGSYKQEVFHSEEGVKEFVRFLNSTNTPLIDDVIYLNTEKQGVPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
A+ + + + + + Y N+I TI+GGTH G + +LTR L + SK ++ + +SG
Sbjct: 266 CAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTRVLKKYAEDSKALEKAKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+
Sbjct: 325 EDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKLIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A +AA++AR+ V++KS + LPGKLADCSS TPEE E+F+VEGDSAGGSA
Sbjct: 385 DKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCSSRTPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GV-KGEDFKK---E 471
KQGR R+FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED KK +
Sbjct: 445 KQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGVDDSEDSKKANID 504
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
LRY+K+II+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YC
Sbjct: 505 KLRYNKVIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIANPPLYKCSKGKVSEYC 564
Query: 532 YDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y D E + + I QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA
Sbjct: 565 YTDEERQAFMQKYGDGTETGIHTQRYKGLGEMNPEQLWETTMNPETRILKQVSIENAAEA 624
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 625 DYIFSMLMGDDVAPRREFIEKHATYANID 653
>gi|164510799|emb|CAK18881.1| topoisomerase II subunit B [Staphylococcus intermedius NCTC 11048]
Length = 640
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 317/619 (51%), Positives = 417/619 (67%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA NIEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADNIEVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS++LEV V RDG +HQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSDTLEVYVHRDGRIHHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V D+ GT IRF D +F +++ T+ RIRELAFLN
Sbjct: 148 AYHKGVPAFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D E + + Y + GG++ YV+ +N +K+PLH+ + + D I +++A
Sbjct: 204 GIRITLTDE-RDEENVREDSYHYEGGIKSYVELINENKEPLHEEPIYVHQTRDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ S ++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE
Sbjct: 263 LQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGAQSKLIKEDKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K
Sbjct: 322 TREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLFEHPQVARIIVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K
Sbjct: 382 GIMASRARIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKARLDKILSNNEIRQMVTAFGTGIGGE-FDISKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K +SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG
Sbjct: 561 LKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|386002763|ref|YP_005921062.1| DNA gyrase subunit B [Methanosaeta harundinacea 6Ac]
gi|357210819|gb|AET65439.1| DNA gyrase, B subunit [Methanosaeta harundinacea 6Ac]
Length = 640
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 438/620 (70%), Gaps = 18/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLVYE++DN++DEA AG S I + L AD + SV D+GRGIP+D+H
Sbjct: 36 MYIGSTNLAGLHHLVYEVVDNSIDEAMAGRCSEINLVLHADGTASVRDDGRGIPVDIHEH 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K ALE V+T LHAGGKF S Y VSGGLHGVG+SVVNALSE +EV V R+ + Y Q
Sbjct: 96 YKKPALEIVMTKLHAGGKFDHKS--YKVSGGLHGVGVSVVNALSEWMEVEVRRNNLVYWQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+PV+ L H + D GT +RF PD ++F A++F +T+A R+RELAFLN
Sbjct: 154 RYERGRPVSDLEVHGV----SDHTGTTVRFKPDPEIFE-AVEFSFDTLASRLRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
L I++ E + + EY + GG+ +V+ LN +K LH + F ++ DG ++++A
Sbjct: 209 GLKISVEDERTAKRR----EYLYDGGIVSFVEHLNKNKDILHSPPIYFNREKDGTSVEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ +L +AN+I T +GGTH+ G +A+LT+T N + +K +KD D L+G+
Sbjct: 265 LQY-NNTYNENVLSFANNINTREGGTHLAGFRAALTKTTNEYARANKLLKD-DTKLTGDD 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL +ISVR+ +P+FEGQTKT+LGN V +V V E L+E+ E +P V I+ K
Sbjct: 323 LREGLVAVISVRLADPQFEGQTKTKLGNSAVGGIVSSLVSEGLSEFFEENPLVTVKIVEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AA++AR+L R+K+ L S LPGKLADC+ P+ SE++IVEG+SAGGSAKQ
Sbjct: 383 ATQAYRARVAARKARELTRRKNALSSGGLPGKLADCAEKDPQLSELYIVEGESAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVER + KN EI+N+I ALG G+ G+DF+ + RY K++
Sbjct: 443 GRNRHFQAILPLRGKILNVERARLDKILKNNEIRNIITALGTGI-GDDFQLDRARYRKVV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L + G +Y+ PPLY+V+RGK Y Y +A+L
Sbjct: 502 IMTDADVDGSHIRTLLLTFFYRYMRELVEAGYVYIAQPPLYQVKRGKAATYAYSEADLAG 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ A ++QR+KGLGEM P QLWETT++PE+R + ++ +EDA EA+ +FS LMG
Sbjct: 562 ILEGSGGKA--TVQRYKGLGEMNPEQLWETTMDPERRTMLKVTLEDAMEADEIFSILMGE 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+E I+ +A ++ NLD
Sbjct: 620 KVEPRREFIEAHARDVRNLD 639
>gi|384049352|ref|YP_005497369.1| DNA gyrase subunit B [Bacillus megaterium WSH-002]
gi|345447043|gb|AEN92060.1| DNA gyrase subunit B [Bacillus megaterium WSH-002]
Length = 643
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 435/620 (70%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V + DNS++V DNGRGIP+ +
Sbjct: 34 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCDEINVIIEKDNSITVKDNGRGIPVGIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS SLEV V RDG ++Q
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSTSLEVHVHRDGKVHYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L V D+ GT I+F PD ++FT +++D +T+A R+RELAFLN
Sbjct: 152 KYERGVPAADLKV----VGETDKTGTVIQFHPDGEIFTETLEYDFDTLANRLRELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + + E+++ EY + GG++ YV+ LN K+ +H+ + + D I++++A
Sbjct: 208 GIKITI---EDKREEDKRREYHYEGGIKSYVEHLNRSKEVIHEEPIYIEGNRDNISVEIA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE
Sbjct: 265 IQY-NDSYTSNLYSFANNIHTYEGGTHEAGFKTALTRVINDYARKNSVFKDSDANLTGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IIS++ P+P+FEGQTKT+LGN E R + D E+L YL +P V ++ K
Sbjct: 324 VREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDSVFAEHLETYLLENPIVAKKVIEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQ
Sbjct: 384 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF RYHKI+
Sbjct: 444 GRSRHFQAILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GDDFDISKARYHKIV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+V+Y Y+D +L++
Sbjct: 503 IMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLYKVSQGKKVEYAYNDRQLEE 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V +SFP A ++QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 563 VLASFPEGAKPNLQRYKGLGEMNPEQLWETTMDPEFRTLLQVNLQDAIEADETFEILMGD 622
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 623 KVEPRRNFIEENAQYVKNLD 642
>gi|294496880|ref|YP_003560580.1| DNA gyrase subunit B [Bacillus megaterium QM B1551]
gi|294346817|gb|ADE67146.1| DNA gyrase, B subunit [Bacillus megaterium QM B1551]
Length = 638
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 435/620 (70%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V + DNS++V DNGRGIP+ +
Sbjct: 29 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCDEINVIIEKDNSITVKDNGRGIPVGIQEK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS SLEV V RDG ++Q
Sbjct: 89 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSTSLEVHVHRDGKVHYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L V D+ GT I+F PD ++FT +++D +T+A R+RELAFLN
Sbjct: 147 KYERGVPAADLKV----VGETDKTGTVIQFRPDGEIFTETLEYDFDTLANRLRELAFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + + E+++ EY + GG++ YV+ LN K+ +H+ + + D I++++A
Sbjct: 203 GIKITI---EDKREEDKRREYHYEGGIKSYVEHLNRSKEVIHEEPIYIEGNRDNISVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE
Sbjct: 260 IQY-NDSYTSNLYSFANNIHTYEGGTHEAGFKTALTRVINDYARKNSVFKDSDANLTGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IIS++ P+P+FEGQTKT+LGN E R + D E+L YL +P V ++ K
Sbjct: 319 VREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDSVFAEHLETYLLENPIVAKKVIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF RYHKI+
Sbjct: 439 GRSRHFQAILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GDDFDISKARYHKIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+V+Y Y+D +L++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLYKVSQGKKVEYAYNDRQLEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V +SFP A ++QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 558 VLASFPEGAKPNLQRYKGLGEMNPEQLWETTMDPEFRTLLQVNLQDAIEADETFEILMGD 617
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 618 KVEPRRNFIEENAQYVKNLD 637
>gi|238926604|ref|ZP_04658364.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
gi|238885550|gb|EEQ49188.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
Length = 685
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/621 (52%), Positives = 426/621 (68%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + V + DNS++V DNGRGIP+D+H
Sbjct: 78 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVGVTIHKDNSITVTDNGRGIPVDMH-E 136
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG +
Sbjct: 137 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTEMDVEVRRDGKIFAI 194
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLN 179
+SRG VTT H + + D GTR+ F PD ++FT T FD T+ R+RELAFLN
Sbjct: 195 SFSRG--VTTTKLH--EIGTSDTTGTRVHFVPDPEIFTVTTYSFD--TLKHRLRELAFLN 248
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+TI L E +++ + F GG+ +V LN K+ +++ + F D +++
Sbjct: 249 HGITITLTDERGAEVRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEI 306
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE
Sbjct: 307 AMQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKEKDGNLSGE 365
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P V +L
Sbjct: 366 DVREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAVTKKVLD 425
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAK
Sbjct: 426 KALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAK 485
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KI
Sbjct: 486 QGRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKI 544
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E
Sbjct: 545 IIMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDDEQA 604
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K + + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 605 KKLDELGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMG 663
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 DKVEPRRQFIEENAKLVRNLD 684
>gi|188584649|ref|YP_001916194.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349336|gb|ACB83606.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 640
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 300/620 (48%), Positives = 430/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY +I + L N V V DNGRGIP+ HP
Sbjct: 32 MYIGSTDERGLHHLVHEVVDNSIDEAMAGYCDDIRIKLEPGNKVRVTDNGRGIPVKDHPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K LE ++T LHAGGKF S+ Y VSGGLHGVG+SVVN LS+ + V V+RDG Y Q
Sbjct: 92 IKKPTLEVIMTYLHAGGKF--SNDSYKVSGGLHGVGISVVNGLSKWIRVKVYRDGKVYQQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G P T + + D++GT I F PD+++F T ++FD+ + R+++LAFLN
Sbjct: 150 EYEKGYPKTEIK----EIGESDKRGTEIIFLPDEEIFET-VEFDYQVLRNRLQQLAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
++I + E D K ++ + + GG++ +V++LN +K L V + +G +++A
Sbjct: 205 GVSITISDEREDEFKEEH--FKYEGGIKSFVEYLNENKTTLFTPPVYIEGEQEGCKLEVA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + YAN+I T +GGTH G K SLTRT+N ++ +K+ D +L+GE
Sbjct: 263 IQY-NDGYQEMIHSYANNINTHEGGTHESGFKISLTRTVNDYARRHNLLKNGDKNLTGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T IISV+V +P+FEGQTKT+LGN EVR++V+ V E+L YLE +P V I++K
Sbjct: 322 IREGITAIISVKVEDPQFEGQTKTKLGNSEVRRIVEGIVSEHLESYLEENPAVGKKIVNK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A AA++A++L R+K+ L ++LPGKLADC++ +SE+++VEGDSAGGSAKQ
Sbjct: 382 AINASRAREAARKAKELTRRKNALEVTALPGKLADCTTKDASKSELYLVEGDSAGGSAKQ 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + NEEI+ +I A+G G+ GE+F RY +II
Sbjct: 442 GRDREFQAILPLRGKILNVEKARFDKILANEEIKTIITAIGTGI-GEEFDISKARYQRII 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLY V++ + Y ++D EL
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRYMRPLIEHGYVYIAQPPLYMVKKKGKHYYTFNDHELDN 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + S+QR+KGLGEM P QLWETT+NPE R + + ++DA EA+ +F+ LMG
Sbjct: 561 LLEEIGKEGI-SLQRYKGLGEMNPTQLWETTMNPESRTVLNVNLQDAIEADKIFTVLMGE 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V R++ I +NA ++ NLD
Sbjct: 620 KVSPRRKFIEENARDVRNLD 639
>gi|312142414|ref|YP_003993860.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311903065|gb|ADQ13506.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 640
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/621 (50%), Positives = 437/621 (70%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLVYE++DN++DEA AGY + I V + N + V DNGRGIP++ HP
Sbjct: 29 MYIGSTSTEGLHHLVYEVVDNSIDEAMAGYCTEIIVEIQPGNIIKVKDNGRGIPVENHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYH 119
+K A+E V+T LHAGGKFGG GY VSGGLHGVG+SVVNAL+E +EV + W+DG Y
Sbjct: 89 IDKPAVEVVMTTLHAGGKFGGE--GYKVSGGLHGVGISVVNALTEWMEVEIAWKDGKVYK 146
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
QKY RG P L + DS D GT I F D Q+F I +++ +A R++ELAFLN
Sbjct: 147 QKYERGVPQHELRA-IGSCDS-DCTGTTIEFKADPQIFE-EIDYEYRNLAQRLKELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
L I + DS ++ + +EY + GGL +V++LN KKPL+ D + + + ++++
Sbjct: 204 KGLKIKII--DSRVDETKEDEYQYDGGLVSFVKYLNQSKKPLYPDPIYLETEGEEGSLEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ Y+ ++ +AN+I T +GGTH+ G K+++TRT N +K +KD D + G+
Sbjct: 262 AIQY-HQGYNSSIFSFANNINTKEGGTHLSGFKSAITRTFNDYARKKNILKDSDDNFKGQ 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+T IISV++ +P+FEGQTKT+LGN E+R VD +V +L +LE +P + I+
Sbjct: 321 DIREGMTAIISVKLADPQFEGQTKTKLGNSEMRGFVDSAVSSFLKTFLEENPKIAKVIVD 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+LSA +A AA++ARDL R+KS L S++LPGKLADC+ +++E++IVEGDSAGGSAK
Sbjct: 381 KALSAARARKAARKARDLTRRKSALTSTALPGKLADCAKRQAKDTEVYIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+R FQAILPL+GKILNVE+ + N+EI+ LI A+G GV E+F LRY +I
Sbjct: 441 QGRNREFQAILPLKGKILNVEKSRLNKILNNDEIRALITAIGTGV-AEEFDINNLRYERI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDAD+DGAHIRTLLLTFFYRY + L + G IY+ PPLYKV++G++ +Y Y+D LK
Sbjct: 500 IIMTDADIDGAHIRTLLLTFFYRYMRPLLENGNIYIAQPPLYKVKKGRKEEYVYNDKALK 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + + S+QR+KGLGEM P QLW+TT++P+ R+L Q+ IEDA A+ FS LMG
Sbjct: 560 ELLDEIGRDRV-SMQRYKGLGEMNPGQLWDTTMDPDNRILLQVNIEDAILADETFSILMG 618
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R++ IQ NAA + NLD
Sbjct: 619 DKVEPRRKFIQENAAQVKNLD 639
>gi|410666391|ref|YP_006918762.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
gi|409104138|gb|AFV10263.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
Length = 642
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 434/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG RGLH LV+E++DN+VDE AGY IE+ L D SV+V DNGRGIP+D+HP
Sbjct: 36 MYIGNTGARGLHQLVFELIDNSVDEHLAGYCDLIEITLHRDGSVTVRDNGRGIPVDIHPR 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E LT+LHAGGKFGG+ GY +SGGLHGVGLSVVNALS L V V RDG Y Q
Sbjct: 96 TGRPAVEAALTMLHAGGKFGGN--GYEISGGLHGVGLSVVNALSRWLLVEVRRDGRRYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG+ + L + + GT +RF PD Q+F+ +F+ I R+R+L++LN
Sbjct: 154 RYERGQVKSPLK----DAGAAEGTGTTVRFLPDGQIFSER-KFNREYITARVRDLSYLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L L D E++ GG+ ++V+ LN +K+ LH D + F DG+ I++A
Sbjct: 209 GLRFVL----VDEVTGDRQEFYHEGGIADFVRSLNKNKEVLHQDPLYFSDKKDGVVIEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ + Y++ + Y N+I T +GGTH G KA+LTR +N KKS +K+ LSGE
Sbjct: 265 LQYHT-GYTEGIYSYVNNIHTQEGGTHEAGFKAALTRIINDYAKKSGYLKENMEKLSGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV++ P+FEGQTKT+LGN EVR +V+ V E+L E+ E +P I+ K
Sbjct: 324 TREGLTAVLSVKLKEPQFEGQTKTKLGNSEVRGIVESVVSEHLEEFFEENPGPSKLIVEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+K+ L SLPGKLADC+S P E E++IVEGDSAGGSAKQ
Sbjct: 384 AVQAARAREAARKARELTRRKTALDHISLPGKLADCTSKDPRECELYIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+N E+ M NEEI+++I A+G G+ +DF + RYH+II
Sbjct: 444 GRDRRFQAILPLRGKIINAEKARLDKMLSNEEIKSIITAVGTGIL-DDFDLKKARYHRII 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I++DADVDG+HIRTLLLTFFYRY + L + G +Y+ PPLYKV++GK+++Y Y D EL+K
Sbjct: 503 IMSDADVDGSHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKVQKGKRIEYAYSDRELEK 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++ ++ + +IQR+KGLGEM P QLWETT++PE+R + Q+ + DA A+ +F+ LMG
Sbjct: 563 LLRNWKTDNV-TIQRYKGLGEMNPEQLWETTMDPERRTMLQVTLTDAMLADEIFTILMGE 621
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ +A ++ NLD
Sbjct: 622 KVEPRREFIQAHARDVRNLD 641
>gi|333372855|ref|ZP_08464776.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Desmospora sp. 8437]
gi|332971209|gb|EGK10172.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Desmospora sp. 8437]
Length = 641
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 426/621 (68%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+E++DN++DEA AG I+V + DNSV+V DNGRGIP+ + P
Sbjct: 32 MYIGATSSRGLHHLVWEVVDNSIDEALAGRCDTIQVTVNEDNSVTVEDNGRGIPVGIQPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+TVLHAGGKF + GY SGGLHGVG+SVVNALSE LEV V R+G + Q
Sbjct: 92 VGRPAVEVVMTVLHAGGKF--DNEGYKFSGGLHGVGVSVVNALSEWLEVQVKREGKIHVQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+Y +G P + L V K ++ GTRI F PD ++FT ++D+ + R+RELAFLN
Sbjct: 150 RYRKGVPESDLQ-----VTGKTKETGTRITFKPDPEIFTETTEYDYEILQNRLRELAFLN 204
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDL 238
L I L E + + NE+ + GG+ +V+ LN +++ LH F + + + + +
Sbjct: 205 QGLRIMLSDERGE---GKSNEFKYDGGIRSFVEHLNKNRESLHQPPIFIEGEKEELVVQI 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D +S + YAN+I T +GGTH G K++LTR +N ++ +K+ D +LSG+
Sbjct: 262 ALQY-NDGFSSNLYSYANNIHTHEGGTHEAGFKSALTRVINDYARRHNLLKENDNNLSGD 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT IIS+++P+P+FEGQTKT+LGN E R V + E +LE +P V +++
Sbjct: 321 DTREGLTAIISIKIPDPQFEGQTKTKLGNSEARTVTESIFAEQFLAFLEENPAVSKKVIN 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AA++AR+L R+K+ L SSLPGKLADC+S E SE+++VEGDSAGG+AK
Sbjct: 381 KAVMAARAREAARKARELTRRKNALEVSSLPGKLADCTSRKAEISELYLVEGDSAGGTAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILPLRGKILNVE+ NEEI+ + ALG G+ GEDF+ E RYHKI
Sbjct: 441 QGRDRMFQAILPLRGKILNVEKARLDKALSNEEIRTITTALGTGI-GEDFQLEKARYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ +GK+V Y +DD E
Sbjct: 500 MIMTDADVDGAHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKITQGKKVLYAFDDREKD 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ S +QR+KGLGEM QLWETT++PE R L Q+ +EDA +A+ VF +LMG
Sbjct: 560 RIVSELEDKGKVELQRYKGLGEMTATQLWETTMDPESRTLLQVSLEDALDADQVFETLMG 619
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E IQ A V NLD
Sbjct: 620 EKVEPRREFIQEYAKQVRNLD 640
>gi|167043616|gb|ABZ08310.1| putative DNA gyrase B, partial [uncultured marine microorganism
HF4000_APKG2M17]
Length = 655
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 308/623 (49%), Positives = 429/623 (68%), Gaps = 12/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GPRGLHHLV E++DN++DEA AG+ I+V + D S+S+ DNGRGIP+D+HP
Sbjct: 39 MYIGDIGPRGLHHLVNEVVDNSIDEALAGHCDAIDVIIHEDGSISIKDNGRGIPVDMHPI 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+T LHAGGKF + Y VSGGLHGVG+S VNALSE LE ++WRDG + Q
Sbjct: 99 EKRSALEVVMTTLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSEKLEASIWRDGALWKQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G PV + V + + GT +RFWPD +F T +F + +A R+RE+A+LN
Sbjct: 157 TFEYGDPVGAV-AKVRDMKDGESTGTLVRFWPDGGIFQTT-EFRFDRLADRLREMAYLNR 214
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLA 239
+ I++ ED + +EY F GG+ E+V++L+ + P+HD + D D + +++A
Sbjct: 215 HVYISI--EDLREAEGLRDEYHFEGGIIEFVEYLDEARTPIHDETIYIADEDAEVPVEMA 272
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+++ S Y++ +L + N+I T +GGTH+ G + +LTRTL S K+ +K+ + LSG+
Sbjct: 273 MRYNS-GYTENVLSFVNNINTHEGGTHVSGFRRALTRTLKSYADKNNLLKNVKVDLSGDD 331
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T I+S++V P+FEGQTKT+LGN EV+ V+ V L E+L+ HP I+ K
Sbjct: 332 FREGITVILSIKVAEPQFEGQTKTKLGNSEVQGAVESLVFLKLGEWLDDHPKESKRIVEK 391
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AA++AR+LV++K+ S LPGKLADCSS EE EI++VEGDSAGGSAKQ
Sbjct: 392 VIIAAEARAAARKARELVQRKNAFSSGGLPGKLADCSSKNAEECEIYLVEGDSAGGSAKQ 451
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL--GLGVKGEDFKKEALRYHK 477
RDR FQAILPLRGKILNVE+ + NEEI+N++ AL GLG +DF E LRYHK
Sbjct: 452 ARDRHFQAILPLRGKILNVEKARLDRILANEEIRNIVTALGTGLGAGEDDFDPEKLRYHK 511
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II++TDADVDGAHIRTLLLTF YR+ L + G IY+ PPLYK ++GKQ +YC+ D +L
Sbjct: 512 IIVMTDADVDGAHIRTLLLTFLYRHMHALVEAGYIYIAQPPLYKAKKGKQEEYCWTDKQL 571
Query: 538 KKVKSSFPSNA--LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
K+V ++ +IQR+KGLGEM P QLW+TT+NPE R+L+++ I+DAA A+ +FS+
Sbjct: 572 KEVIERIGGDSPEKVTIQRYKGLGEMNPDQLWDTTMNPETRLLQRITIDDAAAADRIFST 631
Query: 596 LMGARVDTRKELIQNAANLVNLD 618
LMG V+ R++ I+ A +D
Sbjct: 632 LMGDAVEPRRKFIERNAKYATID 654
>gi|406671602|ref|ZP_11078841.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
gi|405580852|gb|EKB54911.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
Length = 639
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 310/620 (50%), Positives = 419/620 (67%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DNA+DEA AGY ++IEV + +NS++V DNGRGIP+D+
Sbjct: 30 MYIGSTSEEGLHHLVWEIVDNAIDEALAGYCNHIEVTIEKNNSITVTDNGRGIPVDIQHK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG SVVNALS L V V R G Y
Sbjct: 90 TGRPAVETVYTVLHAGGKFGGGS--YKVSGGLHGVGASVVNALSSQLSVEVSRSGKVYRI 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG +T + + + GTR+ F PD +FT ++ N + RIRELAFLN
Sbjct: 148 EFERG----NITSELKVIGDHEETGTRVNFVPDPTIFTETTEYRFNILNERIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L + D EK YF+ GG++ YV +LN DK+ L + + +++GIT+++A
Sbjct: 204 NLRITLVDKREDREKEV--SYFYEGGIKSYVSYLNEDKEVLFSEPIYLEGELEGITVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ + AY + +AN+I T +GGTH G K SLTR +N +++ +K+ + +L+GE
Sbjct: 262 LQYTT-AYETIINSFANNIHTHEGGTHESGFKTSLTRVINDYARRANLIKESESNLTGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGL I+S++ P+P+FEGQTKT+LGN EVR V D+ + +L +P + +I+ K
Sbjct: 321 TREGLVAIVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSSHFETFLLENPKIARTIVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA AAKRAR++ R+KS L ++LPGKLADCSS E+ E+FIVEGDSAGGSAKQ
Sbjct: 381 GILASKARHAAKRAREITRKKSGLEIANLPGKLADCSSKDAEKCELFIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R +QAILP+RGKILNVE+ + N EI++L A+G G G DF E RYHK+I
Sbjct: 441 GRSRLYQAILPIRGKILNVEKASMDRILNNMEIRSLFTAMGTGF-GADFDVEKARYHKLI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT +RY + L + G +Y+ +PPLYK++ GK+ Y D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTLVFRYMRPLLEAGYVYIALPPLYKLKVGKKEFYLDTDEQLDQ 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P + +S+QR+KGLGEM QLWETT+NP R ++++ ++DA EAN V + LMG
Sbjct: 560 WQKENP-DVRFSLQRYKGLGEMNAEQLWETTMNPANRRMQKVKMKDADEANRVMNMLMGE 618
Query: 600 RVDTRKELI-QNAANLVNLD 618
V R+E I QNA + NLD
Sbjct: 619 EVQPRREFIEQNAVYVRNLD 638
>gi|78707357|gb|ABB46484.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 412/620 (66%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L + V DNGRGIP+D+HP
Sbjct: 25 MYIGSTGERGLHHLVWEIVDNSIDEALGGYADEITIEILKGEVIRVTDNGRGIPVDIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y Q
Sbjct: 85 TKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L S D+ GT I F D +FT + +++ T+ RI++LAFLN
Sbjct: 143 KYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + L D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA
Sbjct: 199 GLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ D+YS + + N+I T +GG H +G K +LTR ++ K KD S+SGE
Sbjct: 257 MQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K
Sbjct: 314 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 374 VLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+
Sbjct: 434 GRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIV 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL +
Sbjct: 493 IMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNE 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG
Sbjct: 553 LLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGE 610
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ RK+ IQ NA ++D
Sbjct: 611 EVEPRKDFIQKNAQYATDID 630
>gi|198274299|ref|ZP_03206831.1| hypothetical protein BACPLE_00442 [Bacteroides plebeius DSM 17135]
gi|198272789|gb|EDY97058.1| DNA gyrase, B subunit [Bacteroides plebeius DSM 17135]
Length = 654
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 310/629 (49%), Positives = 417/629 (66%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTNVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V V + D GTR FWPD +FT ++ ++ + R+RELA+LN
Sbjct: 151 EYECGKPLYA----VKEVGTTDITGTRQTFWPDGSIFTVT-EYKYSILQARMRELAYLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L + E Y + F G++E+V++LN++ PL DV+ + GI I+
Sbjct: 206 GITITLTDKRVKEEDGSYKQEKFHSEEGVKEFVRFLNSNNTPLIDDVIYLNTEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
A+ + + + + + Y N+I TI+GGTH G + +LTR L ++SK ++ + +SG
Sbjct: 266 CAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRMALTRVLKKYAEESKALEKAKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+
Sbjct: 325 EDFREGLIAVISVKVSEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKIIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A +AA++AR+ V++KS + LPGKLADCSS EE E+F+VEGDSAGGSA
Sbjct: 385 DKVVLAATARVAARKARESVQRKSPMGGGGLPGKLADCSSRVAEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKEA--- 472
KQGR R+FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GE+ K+A
Sbjct: 445 KQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGVDGEEDSKKANID 504
Query: 473 -LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
LRYHK+II+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YC
Sbjct: 505 KLRYHKVIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIATPPLYKCSKGKISEYC 564
Query: 532 YDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y D + + I QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA
Sbjct: 565 YTDEARQAFIQKYGEGNEQGIHTQRYKGLGEMNPEQLWETTMNPETRILKQVNIENAAEA 624
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 625 DYIFSMLMGDDVGPRREFIEKNATYANID 653
>gi|336112685|ref|YP_004567452.1| DNA gyrase subunit B [Bacillus coagulans 2-6]
gi|335366115|gb|AEH52066.1| DNA gyrase, B subunit [Bacillus coagulans 2-6]
Length = 641
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 317/621 (51%), Positives = 428/621 (68%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ I V + DNS++V DNGRGIP+ +
Sbjct: 31 MYIGSTSARGLHHLVWEIVDNSIDEALAGFCDEINVFIEKDNSITVKDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++T+LHAGGKFGG S LHGVG SVVNALS L+V V RDG YHQ
Sbjct: 91 VGRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELDVYVHRDGHIYHQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP L + DR GT F PD ++FT I+FD++ + R+RELAFLN
Sbjct: 149 KYRRGKPAFDLKI----IGETDRTGTTTHFKPDPEIFTETIEFDYDILTTRLRELAFLNK 204
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I + K + +P K Y+ + GG++ YV+ LN K+ LH + + + DGIT+++
Sbjct: 205 GIKITIEDKREKNPRKQVYH---YEGGIKSYVEHLNRSKEVLHKEPIYVEGEKDGITVEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+LQ+ +D ++ + +AN+I T +GGTH G K +LTR +N +K+ +K+ + +L+GE
Sbjct: 262 SLQY-NDGFTSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNNLIKENEANLTGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+S++ P+P+FEGQTKT+LGN E R + D E +++ +P V I+
Sbjct: 321 DVREGLTAIVSIKHPDPQFEGQTKTKLGNTEARTITDAVFSETFEKFMMENPQVARKIVE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K L A +A +AAK+AR+L R+KS L S+SLPGKLADC+S P ESE++IVEGDSAGGSAK
Sbjct: 381 KGLMAARARMAAKKARELTRRKSALESTSLPGKLADCTSRDPSESELYIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILPLRGKILNVE+ + N EI+ +I ALG GV GEDF RYHK+
Sbjct: 441 QGRDRMFQAILPLRGKILNVEKARLDKILSNAEIRTIITALGTGV-GEDFDISKARYHKV 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFFYRY + L D G IY+ PPLYKV++GK+V+Y Y D L+
Sbjct: 500 VIMTDADVDGAHIRTLLLTFFYRYMRPLIDAGYIYIAQPPLYKVQQGKKVEYVYSDRGLE 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ ++ P+ +IQR+KGLGEM P QLWETT+ P R + Q+ ++DA EA+ F LMG
Sbjct: 560 ELLNTLPAQPKPAIQRYKGLGEMNPEQLWETTMEPANRTMLQVSLDDAIEADGTFEMLMG 619
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 620 DKVEPRRNFIEENAIYVKNLD 640
>gi|295702247|ref|YP_003595322.1| DNA gyrase subunit B [Bacillus megaterium DSM 319]
gi|294799906|gb|ADF36972.1| DNA gyrase, B subunit [Bacillus megaterium DSM 319]
Length = 638
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 435/620 (70%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V + DNS++V DNGRGIP+ +
Sbjct: 29 MYIGSTSAKGLHHLVWEIVDNSIDEALAGYCDEINVIIEKDNSITVKDNGRGIPVGIQEK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS SLEV V RDG ++Q
Sbjct: 89 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSTSLEVYVHRDGKVHYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L V D+ GT I+F PD ++FT +++D +T+A R+RELAFLN
Sbjct: 147 KYERGVPAADLKV----VGETDKTGTVIQFHPDGEIFTETLEYDFDTLANRLRELAFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + + E+++ EY + GG++ YV+ LN K+ +H+ + + D I++++A
Sbjct: 203 GIKITI---EDKREEDKRREYHYEGGIKSYVEHLNRAKEVIHEEPIYIEGNRDNISVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE
Sbjct: 260 IQY-NDSYTSNLYSFANNIHTYEGGTHEAGFKTALTRVINDYARKNSVFKDSDANLTGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IIS++ P+P+FEGQTKT+LGN E R + D E+L YL +P V ++ K
Sbjct: 319 VREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDSVFAEHLETYLLENPIVAKKVIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQ
Sbjct: 379 GLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF RYHKI+
Sbjct: 439 GRSRHFQAILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GDDFDISKARYHKIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+V+Y Y+D +L++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLYKVSQGKKVEYAYNDRQLEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V +SFP A ++QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 558 VLASFPEGAKPNLQRYKGLGEMNPEQLWETTMDPEFRTLLQVNLQDAIEADETFEILMGD 617
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 618 KVEPRRNFIEENAQYVKNLD 637
>gi|160914817|ref|ZP_02077031.1| hypothetical protein EUBDOL_00824 [Eubacterium dolichum DSM 3991]
gi|158433357|gb|EDP11646.1| DNA gyrase, B subunit [Eubacterium dolichum DSM 3991]
Length = 648
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 305/620 (49%), Positives = 431/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+A++IE+A+ DN + V DNGRG+P+ +
Sbjct: 41 MYIGSTSERGLHHLVWEIVDNSIDEALAGFATDIEIAIEKDNVIRVEDNGRGMPVGIVEK 100
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ET+ TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEVTV ++G ++
Sbjct: 101 TGISGVETIFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVTVHQNGKKHFL 158
Query: 121 KYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G KP L + D+ G+ +RF D +FT + +T+ RIR+LAFLN
Sbjct: 159 RFENGGKPSGALKV----IGDTDKHGSVVRFKADASIFTETQVYSFDTLNTRIRQLAFLN 214
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ + + D E+ + EY + GG+ +YV++LN +K LH DV+ +GI ++
Sbjct: 215 KGIRLVII--DEREEEAKRIEYKYDGGIRQYVEYLNKNKNVLHEDVIYVEGLEEGILAEV 272
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D Y + + N+I T++GGTH +G + +LTR +N+ +++ +K KD +L+G+
Sbjct: 273 ALQY-NDGYMPNIYSFCNNINTMEGGTHEDGFRLALTRVINAYARENNLIK-KDETLAGD 330
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V + + L +L +P I+
Sbjct: 331 DVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVSGILGDQLERFLIENPTTAKIIVE 390
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + A KA +AAK+AR+L R+KS L +SLPGKLADCSS E EI+IVEGDSAGGSAK
Sbjct: 391 KGVLASKARMAAKKARELTRRKSALEITSLPGKLADCSSKDASECEIYIVEGDSAGGSAK 450
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ +FQAILPLRGKILNVE+ +++N EI++++ A G G+ G++ LRYHKI
Sbjct: 451 QGRNSKFQAILPLRGKILNVEKARLHRIFENNEIRSMVTAFGCGI-GDEIDISKLRYHKI 509
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHI TL+LTFFYR+ + + + G +Y+ +PPL+KV +G +V+Y Y + E++
Sbjct: 510 VIMTDADVDGAHICTLMLTFFYRFLRPVIEGGYVYIAMPPLFKVAKGNRVEYVYKEEEME 569
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+V++ N ++QR+KGLGEM P QLWETT++P R LKQ+ IEDA EA+ +F LMG
Sbjct: 570 RVRAEMGENV--NVQRYKGLGEMNPEQLWETTMDPAFRTLKQVNIEDAVEADAIFEMLMG 627
Query: 599 ARVDTRKELIQNAANLVNLD 618
V+ R+E IQ A LD
Sbjct: 628 EEVEPRREFIQENAKYATLD 647
>gi|357039045|ref|ZP_09100840.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
gi|355358509|gb|EHG06275.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
Length = 633
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/619 (52%), Positives = 428/619 (69%), Gaps = 15/619 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY I++ + DN+V+V DNGRGIP+ +HP
Sbjct: 28 MYIGSTSARGLHHLVYEVVDNSIDEAMAGYCDKIDIIIHHDNTVTVVDNGRGIPVGIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E VLT LHAGGK GY VSGGLHGVG+SVVNALSE LEV V RDG YHQ
Sbjct: 88 MGLPAVEVVLTKLHAGGK--FGGGGYKVSGGLHGVGVSVVNALSEWLEVEVRRDGFIYHQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG VT+L + GT++ F PD ++F ++F +T+ R+REL+FL
Sbjct: 146 RFERGVSVTSLKT----IGKAKNTGTKVTFKPDPEIFE-ELEFSQDTLVQRLRELSFLTK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I E ++ Q Y +GG+ ++V +LN +K H V F D I +++A
Sbjct: 201 GVKITFIDERTE----QQCVYQHSGGIRDFVLYLNKNKSVQHKPVYFEDTKDQIMVEVAF 256
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D + + + Y N+I TIDGGTH G + +LTR +N GKK +K+ SL GE +
Sbjct: 257 QY-TDGFVENLFSYVNNIHTIDGGTHETGFRTALTRVINDYGKKYNILKNGSSSLLGEDI 315
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT IISV+VP P+FEGQTKT+LGN EVR +VD V +YL+ +LE +P V IL KS
Sbjct: 316 REGLTSIISVKVPEPQFEGQTKTKLGNSEVRGIVDAVVSDYLSTFLEENPSVARKILEKS 375
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
++A +A AA++AR+L R+K+ L SS+LPGKLADCS P SE+FIVEGDSAGGSAKQG
Sbjct: 376 INASRAREAARKARELTRRKTALESSTLPGKLADCSERDPSLSELFIVEGDSAGGSAKQG 435
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRR+QAILPLRGKILNVE+ + NEEI+ LI ALG G+ G+DF E RYHKIII
Sbjct: 436 RDRRYQAILPLRGKILNVEKSRLDKILSNEEIRALITALGTGI-GDDFNIEKARYHKIII 494
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G Y+ PPLY+V + K+ Y Y+D EL+++
Sbjct: 495 MTDADVDGAHIRTLLLTFFYRYMRQLIENGYAYIAQPPLYRVRKEKKEYYVYNDKELEQL 554
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ + + S+QR+KGLGEM P QLW+TT+N + R + Q+ +EDA EAN +FS LMG +
Sbjct: 555 LNRVGRDRI-SLQRYKGLGEMNPEQLWDTTMNFDTRTILQVQLEDAIEANQIFSMLMGDK 613
Query: 601 VDTRKELIQNAANLV-NLD 618
V+ R+ IQN A V NLD
Sbjct: 614 VEPRRVFIQNNARAVRNLD 632
>gi|189502463|ref|YP_001958180.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497904|gb|ACE06451.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
Length = 651
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/632 (49%), Positives = 429/632 (67%), Gaps = 26/632 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GP+GLHHLV+E++DN++DEA AGY + I+V + +DNS++V+DNGRGIP D+H
Sbjct: 31 MYIGDIGPKGLHHLVWEVVDNSIDEALAGYCTTIKVQIHSDNSITVSDNGRGIPTDIHAK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ TV+RDG Y Q
Sbjct: 91 EKRSALEVVMTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTHLQATVYRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y++G P+ V V + +GT I F PD +FTT ++++TIA R+ ELA+LN
Sbjct: 149 EYAKGAPLYP----VKEVGTTTLRGTTIHFQPDDSIFTTTT-YNYSTIAARLGELAYLNA 203
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK-----KPLHDVVGFRKDVDG 233
LTI L + D E N E F + GGL E+V +L+ + +P++ + G + DV
Sbjct: 204 GLTIELTDLREQDQEGNFLQETFHSEGGLAEFVAYLDDAREKLIPQPIY-MEGEKYDV-- 260
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ +AL + + +++ ++ Y N+I TI+GGTH+ G + +LTRTL S +KS ++ +
Sbjct: 261 -PVQVALSYNT-GFTENVVSYVNNINTIEGGTHVAGFRRALTRTLKSYAEKSNLLEKAKV 318
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
+ G+ REGLT +ISV+V P+FEGQTKT+LGN EV VD V E L YLE HP
Sbjct: 319 EIVGDDFREGLTAVISVKVSEPQFEGQTKTKLGNAEVVGAVDSCVSETLQNYLEEHPQEA 378
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I+SK + A +A AA++AR++V++K+VL LPGKLADCS P E+++VEGDSA
Sbjct: 379 KIIVSKVILAAQARHAARKAREMVQRKNVLTGGGLPGKLADCSDNDPAACELYLVEGDSA 438
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK--- 470
GG+AKQGRDRRFQAILPLRGKILNVE+ E +Y NE+++N+I ALG+ E+ K
Sbjct: 439 GGTAKQGRDRRFQAILPLRGKILNVEKAQEHRIYDNEQLRNMIMALGITFGTEEDAKAVN 498
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
E LRYHK+II+TDADVDG+HIRTL+LTFFYRY K L + G +Y+ +PPLY V+RG + +
Sbjct: 499 LEKLRYHKVIIMTDADVDGSHIRTLILTFFYRYLKVLLERGFLYIALPPLYLVKRGSESR 558
Query: 530 YCYDDAE-LKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
YC+ + + + VK P S IQR+KGLGEM QLW TT++P R LKQ+ IE A
Sbjct: 559 YCWTEQDRIAAVKDFSPDGKTESVNIQRYKGLGEMNAEQLWTTTMDPAVRSLKQVTIESA 618
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
AEA+ +FS LMG V R++ IQ A +D
Sbjct: 619 AEADHLFSILMGDEVAPRRDFIQLHAKYAQID 650
>gi|164686442|ref|ZP_02210470.1| hypothetical protein CLOBAR_00007 [Clostridium bartlettii DSM
16795]
gi|164604453|gb|EDQ97918.1| DNA gyrase, B subunit [Clostridium bartlettii DSM 16795]
Length = 633
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/620 (52%), Positives = 429/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEI+DN++DEA GY I V + D SV+ D+GRGIP++ HP
Sbjct: 25 MYIGSTGPRGLHHLVYEIVDNSIDEALQGYCDRIYVCINEDGSVTTKDDGRGIPVETHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT+LHAGGKFGG S LHGVG+SVVN LSE L V+R+G Y Q
Sbjct: 85 TGKSTLETVLTILHAGGKFGGGGYKVSGG--LHGVGISVVNGLSEWLVAEVYRNGKIYRQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G + L V D GT I+F PD +F I FD+ T+ R+RELAFLN
Sbjct: 143 SYKKGITDSELEI----VGESDHTGTIIQFMPDATIFDD-IVFDYKTLETRLRELAFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I ED P + Q E+ + GG+ E+V++LN+ K P+H+ VV K + +++A
Sbjct: 198 GVRIVF--EDKRPGQEQKKEFLYDGGIREFVEYLNSTKTPIHENVVYIDKKIQDCMVEIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YS+ +L +AN+I T +GG H+ G KA+LT+T+N K++K +K+ D +LSGE
Sbjct: 256 IQY-TDGYSENILSFANNIDTHEGGAHLAGFKAALTKTVNEYAKRNKLLKENDANLSGED 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++P+P+FEGQTKT+LGN +R +VD E L +LE +P I+ K
Sbjct: 315 IREGLTAVVSVKLPDPQFEGQTKTKLGNTRMRGIVDAVTVEELGAFLEENPQTSRIIVDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AAKRAR+L R+K+VL S+SLPGKLADC+ P +SEIF+VEGDSAGGSAKQ
Sbjct: 375 ALRAQRAREAAKRARELTRRKTVLESTSLPGKLADCAEKDPAKSEIFLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ + ++EI+N+I A G GV G DF E RYHKI+
Sbjct: 435 GRDRYTQAILPLRGKILNVEKSRLDRILSSDEIKNMITAYGCGV-GNDFDLEKARYHKIV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY + L D G +Y+ PPLYKV++ K+ Y Y D +L+
Sbjct: 494 IMTDADVDGAHIRTLLLTFFFRYMRPLIDNGYVYIAQPPLYKVKKQKKEYYVYSDKQLEA 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + +QR+KGLGEM P QLWETT+NPE R L Q+ I+DA EA+ +FS LMG
Sbjct: 554 LLEEIGKSGI-ELQRYKGLGEMNPEQLWETTMNPETRTLLQVTIDDATEADRIFSMLMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V RKE I+ A V NLD
Sbjct: 613 KVGPRKEFIEENAEFVKNLD 632
>gi|154249648|ref|YP_001410473.1| DNA gyrase subunit B [Fervidobacterium nodosum Rt17-B1]
gi|154153584|gb|ABS60816.1| DNA gyrase, B subunit [Fervidobacterium nodosum Rt17-B1]
Length = 650
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 317/625 (50%), Positives = 429/625 (68%), Gaps = 18/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN++DEA G+ I+V + +D SV V DNGRGIP+D+HP
Sbjct: 41 MYIGSTGKNGLHHLVYEIVDNSIDEALQGFCDTIKVTIKSDGSVEVEDNGRGIPVDIHPE 100
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALE V+T LHAGGKF S S Y VSGGLHGVG SVVNALSE +EV V RDG Y Q
Sbjct: 101 TGTSALEVVMTTLHAGGKF--SKSSYKVSGGLHGVGASVVNALSEWMEVEVHRDGKIYRQ 158
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+RG T V + +++GT +RF PDK +FTT +FD +TI R+R+LAFLNP
Sbjct: 159 RYARG----VKTTEVEVIGETNKRGTIVRFKPDKLIFTTT-EFDSDTILTRLRDLAFLNP 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI E +D ++ + +AGGL+E++ LN K LH+VV + +A
Sbjct: 214 SITIEFVDERNDIKRTLH----YAGGLKEFIAHLNKGSKTLHEVVVIDGSQQDCEVHIAF 269
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D +T++ + N+I+TIDGGTH+ G K + TR +N LGKK +K + GE +
Sbjct: 270 QY-TDEDGETIVSFVNNIKTIDGGTHVTGFKTAFTRVVNELGKKKNLIKGE--PFKGEDL 326
Query: 301 REGLTCIISV-RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T +++V + P+FEGQTK++LGN E++ V + V++ LT+Y E++ VL I+ K
Sbjct: 327 REGMTAVVNVLMMGTPQFEGQTKSKLGNEEIQDAVAKVVRDKLTDYFEVNETVLKIIIQK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AAKRAR+ V++KS L +S+LPGKLADC + EE+E+FIVEGDSAGGSAKQ
Sbjct: 387 AQQAREAREAAKRAREAVKRKSALGASTLPGKLADCITKNFEEAELFIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQAILPLRGKILNVE+ E + KNE+++++I A+ G GE+F LRY KI+
Sbjct: 447 ARDRNFQAILPLRGKILNVEKSSELKLLKNEQVKDIIMAI-GGGIGENFDTSKLRYGKIV 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELK 538
I+TDADVDGAHIRTLLL FYRY + L +E IY+ +PPLYK+ G++ Y Y D EL
Sbjct: 506 IMTDADVDGAHIRTLLLALFYRYMRQLIEEERIYIAMPPLYKLSISGEKPMYLYSDEELN 565
Query: 539 K-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + + +N Y +QR+KGLGEM P QLWETT+NP+ R + ++ IEDA EA+ +F LM
Sbjct: 566 EMINIAKQNNKRYEVQRYKGLGEMNPEQLWETTMNPKTRKIIKVKIEDAEEADSLFEILM 625
Query: 598 GARVDTRKELIQNAANLVNLDHLDI 622
G + R+E I A ++L LD+
Sbjct: 626 GKDPEERREYIMRHARQLSLVDLDV 650
>gi|339501434|ref|YP_004699469.1| DNA gyrase subunit B [Spirochaeta caldaria DSM 7334]
gi|338835783|gb|AEJ20961.1| DNA gyrase, B subunit [Spirochaeta caldaria DSM 7334]
Length = 635
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/628 (49%), Positives = 436/628 (69%), Gaps = 23/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYE++DN+VDEA G+ ++I V L ++ V V DNGRGIP+D+HP+
Sbjct: 25 MYIGSTGIDGLHHLVYEVVDNSVDEAMQGHCTDILVVLEKNDIVRVEDNGRGIPVDIHPS 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF +S Y VSGGLHGVG+SVVNALS EV V RDG ++Q
Sbjct: 85 EKVSALELVMTKLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSTWCEVFVHRDGKIHYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
KY G P ++ + + +++GT +RF D +F TT FD ++ R+RELAFLN
Sbjct: 143 KYHIGVPEESVKV----IGTTNKRGTIVRFLADATIFETTTYNFD--VLSNRLRELAFLN 196
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGIT 235
+ I++R E K+ +E+ F GG+ +V++LN +K LH + G R D++
Sbjct: 197 KGIRISIRDERLTTPKS--HEFIFEGGVVSFVEYLNQNKTVLHKECIYIAGTRDDIE--- 251
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++ A+Q+ +D +++ M + N I T +GGTH+ G K++LTRTLN KKSK K + SL
Sbjct: 252 VECAIQY-NDGFNEIMFSFVNDINTREGGTHLVGFKSALTRTLNEYLKKSKLAKKMEESL 310
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SG+ VREGLT ++SV+VPNP+FEGQTK +LGN EV+ +V+ V E L +L+ HPD++++
Sbjct: 311 SGDDVREGLTAVLSVKVPNPQFEGQTKGKLGNSEVKGIVESLVNEQLELFLDQHPDIVNA 370
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL KS+ A KA +AA++ARD R+K+++ S+ LPGKLADCS P + E+FIVEGDSAGG
Sbjct: 371 ILEKSVLAAKARIAARQARDATRRKNLMESAGLPGKLADCSEKDPTKCELFIVEGDSAGG 430
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK GR+R FQAIL L GK+LNVE+ + N+++Q +I ++G G+ G+ F LRY
Sbjct: 431 SAKMGRNRAFQAILSLWGKMLNVEKTHIEKVITNDKLQPIIASIGAGI-GDSFDISKLRY 489
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+ DADVDG+HIRTLLLTFFYRY L + G +Y+ +PPLYK+ K+V Y YDDA
Sbjct: 490 HKIIIMADADVDGSHIRTLLLTFFYRYMTELIERGHVYLAMPPLYKITYEKKVFYAYDDA 549
Query: 536 ELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
E ++ S +IQR+KGLGEM P QLWETT++PE+R + Q+ ++DA EA +FS
Sbjct: 550 EKDRILAESGKDPEKVAIQRYKGLGEMNPDQLWETTMDPERRNIVQVHMDDAVEAERIFS 609
Query: 595 SLMGARVDTRKELIQNAANLVNLDHLDI 622
+LMG +V+ R+ I+ N + + +LD+
Sbjct: 610 TLMGEQVEPRRIFIEE--NALAVSYLDV 635
>gi|308066844|ref|YP_003868449.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
gi|305856123|gb|ADM67911.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
Length = 636
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/623 (52%), Positives = 434/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY +I+V + DNSV+V DNGRGIP+ H
Sbjct: 28 MYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVHEDNSVTVTDNGRGIPVSEHAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFGG VSGGLHGVG+SVVNALS + V V RDG Y Q
Sbjct: 88 MKKSALEVVMTVLHAGGKFGGGGY--KVSGGLHGVGVSVVNALSSKMIVHVKRDGHLYEQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D GT+ F+PD Q+FT +D++T+ RIRELAFLN
Sbjct: 146 EYHRGAP----QYDVRVIGDTDETGTQTTFYPDDQIFTETTVYDYDTLQTRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I+L +D + + + GG+ EYVQ+LN ++ LH+ V G R D I +
Sbjct: 202 GIAISL----TDERTGASDTFHYEGGISEYVQFLNQKREALHEQPIYVEGSR---DMIQV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+
Sbjct: 255 EVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDNNANLT 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V +
Sbjct: 314 GDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRV 373
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ KSL A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGS
Sbjct: 374 VDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYH
Sbjct: 434 AKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDIAKARYH 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + + D G IY+ PPL+KVER K V+Y +AE
Sbjct: 493 KVIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIAQPPLFKVERNKVVRYANSEAE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ F NA Y++QR+KGLGEM QLWETT++PE R + Q+ + DA A+ +F++L
Sbjct: 553 RDEIIREFGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTVSDAMLADTLFNTL 612
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R++ IQ A V NLD
Sbjct: 613 MGDNVEPRRDFIQEHAKYVKNLD 635
>gi|313887747|ref|ZP_07821429.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846356|gb|EFR33735.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 637
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/624 (50%), Positives = 439/624 (70%), Gaps = 18/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGPRGLHHLVYEI+DN++DEA AG +I + + + SV + DNG GIP+D+HP
Sbjct: 28 MYIGSTGPRGLHHLVYEIVDNSIDEALAGICDHIIIKINKNGSVEITDNGSGIPVDIHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF +S Y VSGGLHGVG+SVVNALS L TV R+G Y Q
Sbjct: 88 TGKSTVETVLTILHAGGKF--DNSAYKVSGGLHGVGVSVVNALSNKLVATVKRNGKIYRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++RG + L V+ + D GT I F PD +F T ++F +A R RE+AFLN
Sbjct: 146 EFARGIRKSDL--EVIGETNTDETGTTIYFEPDDTIFET-VEFSDEVLAKRFREMAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDL 238
+ I E D NE F + GG++ +V+++N KKP+HD + + ++ + +++
Sbjct: 203 GIKIEFIDERKD-----LNEVFHYEGGIKSFVEFINAKKKPVHDEIIYIDEIREETAVEI 257
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D+YS+ +L +AN+I T +GGTH+ G +++LTRTLN G+K+ +K+K+ +LSGE
Sbjct: 258 AIQY-TDSYSEVVLSFANNINTEEGGTHLSGFRSALTRTLNDYGRKNNIIKEKEENLSGE 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREG++ +ISV++P+P+FEGQTK +LGN E R +VD + E L +LE +P V IL
Sbjct: 317 DVREGISAVISVKLPDPQFEGQTKGKLGNSETRGIVDSVLSEDLAVFLEENPRVGKQILD 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+LSA +A AA++ARDL R+K+ L S +LPGKLADC + P+ +EIF+VEG+SAGGSAK
Sbjct: 377 KALSARRAREAARKARDLTRKKNNLESMTLPGKLADCQNDDPKRNEIFLVEGNSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRD +QAILPLRGKI+NVE+ M + EI+ +I A G G+ GE+F E LRY KI
Sbjct: 437 DGRDSAYQAILPLRGKIMNVEKARLDRMLNSSEIRAMITAFGTGI-GEEFDLEKLRYDKI 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDDAEL 537
II+TDADVDGAHI TLLLTFF+RY K L +EG +YV PLY +E+G ++ +YC+++ EL
Sbjct: 496 IIMTDADVDGAHIMTLLLTFFFRYMKPLIEEGHVYVAQAPLYGIEKGTKILRYCHNEKEL 555
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + + + +I+R+KGLGEM P QLWETT+NP+ R+L ++ I+D AEA+ FS LM
Sbjct: 556 RLALKEYKDSKV-NIKRYKGLGEMDPEQLWETTMNPDNRLLLKVNIDDLAEADDTFSILM 614
Query: 598 GARVDTRKELIQNAANLVNLDHLD 621
G V+ R++ I N V D++D
Sbjct: 615 GTEVEPRRDFI--TENAVYADYID 636
>gi|255692967|ref|ZP_05416642.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|423301203|ref|ZP_17279227.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
gi|260621278|gb|EEX44149.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|408471804|gb|EKJ90333.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
Length = 652
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 306/627 (48%), Positives = 424/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRGGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTSDITGTRQQFWPDGSIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L R+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLSYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + ED KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEDDSKEANIEKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY +GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCTKGKVKEYCWT 564
Query: 534 DAELKKVKSSF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
DA+L+ ++ S + IQR+KGLGEM QLW TT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQLQNFIDTYGGGSESAVHIQRYKGLGEMNAEQLWSTTMDPENRMLKQVNIDNAAEADY 624
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 625 IFSMLMGEDVGPRREFIEENATYANID 651
>gi|373498797|ref|ZP_09589298.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
gi|404367389|ref|ZP_10972756.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|313690309|gb|EFS27144.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|371960408|gb|EHO78066.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
Length = 635
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/621 (50%), Positives = 423/621 (68%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DNAVDEA AGY I V +L DN + V DNGRGIP+ +HP
Sbjct: 25 MYIGTTSERGLHHLVWEIVDNAVDEALAGYCDKIIVNILPDNIIEVIDNGRGIPVGIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE +VTV DG ++Q
Sbjct: 85 YNKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWTDVTVKTDGKIWYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY+RG P + + D GT +RF D ++F T I +D+NT+ R++ELA+LN
Sbjct: 143 KYNRGIPEEDVKEIGVTTD----HGTSVRFKADHEIFETLI-YDYNTLKNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-KKPLHDVVGFRKDVDGITIDLA 239
L I L +P K + E+ F GG+ ++++ + + +K + + + +VD +T+D+A
Sbjct: 198 GLEIHLSDSRKEPYKKE--EFKFEGGIVDFLKEITEETEKLIPEPIYMSGEVDNVTVDIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + ++ + + N+I T +GGTH+ G + +LTR +N +GK +K+KD L G
Sbjct: 256 FLYTVNQ-AEVIYSFVNNINTHEGGTHVSGFRTALTRVINDVGKAQGYLKEKDGKLQGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T I+SV+VP P+FEGQTKT+LGN EV +V V L LE +P+ I+ K
Sbjct: 315 IREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVSTLVGTNLKIVLEDNPNDTKIIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADCSS P+E EI+IVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCSSKNPDECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ +N E++ +I A G + G+ F E LRY KII
Sbjct: 435 GRDRSHQAILPLRGKILNVEKAGLHKSLENNEVRAMITAFGTSI-GDSFNIEKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTF YR+ L G +Y+ PPLYK+ GKQ++Y Y D ELK+
Sbjct: 494 LMTDADVDGAHIRTLLLTFIYRFMVDLIYNGNVYIAQPPLYKITTGKQIRYAYTDKELKE 553
Query: 540 VKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ F + Y++QR+KGLGEM P QLW+TT+NP+ R L Q+ I+DA A+++F LMG
Sbjct: 554 ITDVFEGDDRKYTLQRYKGLGEMNPEQLWDTTMNPDTRTLLQVTIDDARAADMLFDKLMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+VD R+E I +NA + NLD
Sbjct: 614 DKVDPRREFIEENAVYVKNLD 634
>gi|401563979|ref|ZP_10804902.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
gi|400189260|gb|EJO23366.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
Length = 684
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +EV + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVEVVIHGDNSITVTDNGRGIPVDMH-E 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS +++V V RDG +
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSTMDVEVRRDGEIHAI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 SFARG--VTQEKLHT--IGTCETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L D E+ + + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLV--DERGEEERRETFHFDGGIRSFVAHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E L EY E +P V +L K
Sbjct: 366 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLMEYFEENPAVTKRVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y DAE +K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDAEQEK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGREGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|392988234|ref|YP_006486827.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
gi|392335654|gb|AFM69936.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
Length = 648
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/624 (50%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DE AG+A+ I+V + DNS++V D+GRGIP+D+
Sbjct: 34 MYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIQVIIEKDNSITVIDDGRGIPVDIQAK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+V V++DG Y+Q
Sbjct: 94 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTQLDVKVYKDGNVYYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT FD N +A RIRELAFLN
Sbjct: 152 EYRRGAVVDDLKI----IEQTDRNGTTVHFIPDPEIFTETTVFDFNKLATRIRELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I++ ED E EY + GG++ YV++LN +K + + V + IT++++
Sbjct: 208 GMKISI--EDKREESPVVKEYHYDGGIKSYVEYLNANKTVIFPEPVYLEGEQQDITVEVS 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH G K +LTR +N +K K +K+ D +L+GE
Sbjct: 266 MQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTRVINDYARKQKLMKENDDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ ++L +P V I+ K
Sbjct: 325 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFMKFLLENPSVGRQIIEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 385 GLLASKARLAAKRAREVTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK++ Y +
Sbjct: 504 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKKITYVQPGKNAEE 563
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK+V +S P+ S+QR+KGLGEM QLWETT++P RM+ ++ ++DA A+ +F
Sbjct: 564 DLKQVVASLPATPKPSVQRYKGLGEMDDHQLWETTMDPSNRMMARVSVDDAIAADQIFEM 623
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 624 LMGDRVEPRRAFIEENAHYVKNLD 647
>gi|239624129|ref|ZP_04667160.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520515|gb|EEQ60381.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 637
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 427/622 (68%), Gaps = 14/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNAVDEA AGY +IEV + DNS++V D+GRGIP+ +
Sbjct: 25 MYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIEVTINEDNSITVVDDGRGIPVGIQKK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E V T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q
Sbjct: 85 AGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYKDGDIYQQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK T ++ S D+ GT++ F PDK++F I +D++T+ R+RE AFL
Sbjct: 143 RYERGK--VTYPLKIVGKCSPDQHGTKVTFLPDKEIFEETI-YDYDTLKIRLRETAFLTK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L K+D D +K + + + GG++E+V +LN K PL+D V+ +G+ ++++
Sbjct: 200 NLRITL-KDDRDEKKEK--TFHYEGGIKEFVTYLNKGKTPLYDQVIYCEGSKEGVYVEVS 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q +D+Y++ + + N+I T +GGTH+ G K +LT+T N +K+K +KD + SLSGE
Sbjct: 257 MQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYARKNKLLKDNEDSLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IIS++V P+FEGQTK +LGN E R VD V E LT +LE +P + ++ K
Sbjct: 316 IREGLTAIISIKVEEPQFEGQTKQKLGNSEARSAVDNIVSEQLTYFLEQNPAIAKAMCEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK
Sbjct: 376 SIMAQRARAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKT 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R R QAILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKII
Sbjct: 436 ARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-EDFDISKLRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K+V Y Y D EL
Sbjct: 495 IMTDADVDGAHISTLLLTFLYRFMPELIKQGYVYLAQPPLYKVEKSKKVWYAYSDDELNS 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLM 597
+ + + IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LM
Sbjct: 555 ILTDIGRDTNNKIQRYKGLGEMDAEQLWETTMDPERRVLLRVTLDEETTSEIDLTFTTLM 614
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E I+ NA + NLD
Sbjct: 615 GDQVEPRREFIEANAKRVQNLD 636
>gi|427406668|ref|ZP_18896873.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
gi|425708098|gb|EKU71139.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
Length = 684
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY N+ V + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNAIDEALAGYCDNVAVTIHKDNSITVVDNGRGIPVDMH-E 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGRIYEI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG L V + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 SFARGNTTEKLR----EVGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L E + +++ + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLTDERGEEPRSE--TFHFEGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKDKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K
Sbjct: 366 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPTERTMLRVAAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|315925615|ref|ZP_07921825.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621156|gb|EFV01127.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 668
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/620 (50%), Positives = 429/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AGY I V++ DN+V+V D+GRGIP ++
Sbjct: 60 MYIGSTGSQGLHHLVYEVVDNAIDEALAGYCDKIIVSVDKDNAVTVMDDGRGIPTGINHK 119
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K+ +E LTVLHAGGKFGG S LHGVG+SVVNALSE L V V ++ Y Q
Sbjct: 120 EGKTGVELALTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEVLTVEVKQNKKVYRQ 177
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G + L V + +R GT+I F PD ++F T + +D++ + R+RELAFLN
Sbjct: 178 TFEHGNKTSELDV----VGTTNRTGTKIYFKPDPEIFDTTV-YDYDVLEHRLRELAFLNK 232
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L+ D P + Q EY +AGG+ Y++++N +K PL+ + + K +D ++LA
Sbjct: 233 GVAITLK--DERPGQEQTGEYHYAGGIRSYIEYMNRNKDPLYPQITYYEKAMDEYALELA 290
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ Y + + YAN+I T +GGTH+ G K++LTRT+N+ +K+ +K D +LSG+
Sbjct: 291 FQYTR-GYQENIYSYANNIYTPEGGTHLNGFKSALTRTINNYARKAGLLKQNDKNLSGDD 349
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS+++ P+FEGQTKT+LGNPEV+ +V+ V E L+ +LE +P+V +I+ K
Sbjct: 350 VREGLTAVISIKLLEPQFEGQTKTKLGNPEVKGIVETIVNEELSNFLEENPNVAKAIVEK 409
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++SA A +AAKRAR++ R+KS L ++SLPGKLADC P +SEIFIVEGDSAGGSAK
Sbjct: 410 NISASHARMAAKRAREMTRRKSALDATSLPGKLADCREKDPAQSEIFIVEGDSAGGSAKV 469
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ M ++ I+ +I A G G+ GEDF E RYHKI+
Sbjct: 470 GRDSRIQAILPLRGKILNVEKARLDRMLTSDTIKGMITAFGTGI-GEDFDIEKARYHKIV 528
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLYKV GK V+Y YDDA+L +
Sbjct: 529 IMTDADVDGAHIRTLLLTFFYRYMRGLIDHGYVYIAQPPLYKVSWGKHVEYAYDDADLNR 588
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + ++QR+KGLGEM QLWETT+NP+ R + ++ IEDA A+ +F+ LMG
Sbjct: 589 -RLEDKDRSRVTLQRYKGLGEMDAEQLWETTMNPDTRTMLRVGIEDATYADEIFTMLMGD 647
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V RKE I+ NA + NLD
Sbjct: 648 KVQPRKEFIERNAKKVQNLD 667
>gi|257457903|ref|ZP_05623062.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
gi|257444616|gb|EEV19700.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
Length = 638
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 306/623 (49%), Positives = 422/623 (67%), Gaps = 16/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP GLHHLVYE++DN +DEA AGY I V L +++V V DNGRGIP+D+HP
Sbjct: 26 MYIGSTGPDGLHHLVYEVVDNCIDEAMAGYCDTILVVLEKNDTVRVEDNGRGIPVDIHPE 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE VLT LHAGGKF S Y VSGGLHGVG+SVVNALS S+E V RDG EY Q
Sbjct: 86 EGVSALELVLTRLHAGGKFDKGS--YKVSGGLHGVGVSVVNALSTSMEAIVCRDGFEYVQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K++ G+P+ +T ++GT IR+ D +FT ++ + +A R+RELAFLN
Sbjct: 144 KFALGEPLGPVTKR----GETQKRGTTIRWTADPSIFTETTTYNFDVLAVRLRELAFLNN 199
Query: 181 KLTIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDL 238
+ I LR E S P++ + F GGL +V++LN K+ L + + F + + + +++
Sbjct: 200 TIKITLRDERLSTPKEVTFA---FDGGLSHFVRYLNESKQVLPKEPIYFEGEKNDVVVEI 256
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK---DKDISL 295
A+Q+ +D Y + +L + N I T +GGTH+EG K +LTR +N KK+ + +K+ L
Sbjct: 257 AMQY-NDGYKENILSFVNDINTREGGTHLEGFKTALTRVMNEFLKKNAKLSKKMEKEEKL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE VR GLT ++SV+VP P+FEGQTKT+LGN EVR +VD + E LT + E +P +D
Sbjct: 316 MGEDVRAGLTAVLSVKVPEPQFEGQTKTKLGNSEVRSIVDTFINEKLTLFFEQNPIEIDK 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++ A +AA++A++ R+KS L S LPGKLADCSS PE+ E++IVEGDSAGG
Sbjct: 376 ILEKAVGEATARIAARKAKEATRRKSGLDSFGLPGKLADCSSKDPEKCEVYIVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK+GRD + QAILPL GK+LNVE+ + NE++Q +I LG G+ GEDF + +RY
Sbjct: 436 SAKKGRDSKTQAILPLWGKMLNVEKTRLDKVLNNEKLQPIIATLGTGI-GEDFNLDKIRY 494
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+ DADVDG+HIRTLLLTFF+RY L + G +Y+ +PPLYK+ K+ Y YDD+
Sbjct: 495 HKIIIMADADVDGSHIRTLLLTFFFRYMPELIEHGFVYLAMPPLYKISYNKKEWYVYDDS 554
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E + + + ++QR+KGLGEM QLWETT++P +R + ++ + DA EA+ +FS+
Sbjct: 555 ERDSILNEIGRSVSPAVQRYKGLGEMDGTQLWETTMDPARRKMMRVTLSDAVEADRIFST 614
Query: 596 LMGARVDTRKELIQNAANLVNLD 618
LMG V+ R++ I+ A NLD
Sbjct: 615 LMGEEVEPRRKFIEENAVYANLD 637
>gi|409198278|ref|ZP_11226941.1| DNA gyrase subunit B [Marinilabilia salmonicolor JCM 21150]
Length = 655
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 308/627 (49%), Positives = 428/627 (68%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY ++I V + DNS++V DNGRGIP+D H
Sbjct: 36 MYIGDVGYKGLHHLVYEVVDNSIDEALAGYCTSIGVTINEDNSITVVDNGRGIPVDFHEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS SL+ V RDG Y Q
Sbjct: 96 EGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSISLKAEVHRDGKIYRQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS+GKP++++ V + D GT I F PD +F ++ ++ +A R+REL+FLN
Sbjct: 154 EYSKGKPLSSIE----EVGTTDINGTWITFKPDDSIFNET-EYKYSVLANRMRELSFLNA 208
Query: 181 KLTIAL-RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHDV-VGFRKDVDGITID 237
L I L K + D E N +E F++ GL E+V++++ +++ L D + + + + +D
Sbjct: 209 GLEIVLIDKREVDDEGNVKSERFYSDEGLLEFVKFIDVNREHLIDQPISISTEKNDVPVD 268
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++++ + Y N+I TI+GGTH+ G + LTRTL + KS + +SG
Sbjct: 269 IAIVYNT-SFNENIYSYVNNINTIEGGTHLTGFRRGLTRTLKNWADKSGLLSKLKFDISG 327
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V L YLE +P +I+
Sbjct: 328 DDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSLAVDQAVSTMLNNYLEENPKDAKAIV 387
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K + A A AA++AR+LV++KSVL LPGKLADCS P +SEIF+VEGDSAGG+A
Sbjct: 388 NKVILAATARHAARKARELVQRKSVLTGGGLPGKLADCSEKDPAQSEIFLVEGDSAGGTA 447
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGR RRFQAILPLRGKILNVE+ + +++++EI+N+ ALG+ + ED K E L
Sbjct: 448 KQGRSRRFQAILPLRGKILNVEKALQHRVFESDEIKNIFTALGVNIGTEDDSKALNTEKL 507
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+TDADVDG HI TL++TFF+RY K L +G +Y+ PPLY +++GK QYC+
Sbjct: 508 RYHKIVIMTDADVDGRHINTLIMTFFFRYMKELIKDGYLYIAAPPLYFLKKGKNEQYCWT 567
Query: 534 DAELKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
DA+ ++ F S IQR+KGLGEM QLW TT+NPE R+L+Q+ ++AAEA+
Sbjct: 568 DAQRREFVEKFADGKEDSVHIQRYKGLGEMNAEQLWHTTMNPENRLLRQVTYDNAAEADR 627
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 628 IFSMLMGDDVPPRREFIEKNATYANID 654
>gi|380693260|ref|ZP_09858119.1| DNA gyrase subunit B [Bacteroides faecis MAJ27]
Length = 653
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 309/629 (49%), Positives = 429/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRDGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGVSDITGTRQQFWPDDTIFTETV-YDYKILAARLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
L I+L R+ ++ + + +E F++ GL E+V+++ + ++ L +DV+ + GI I
Sbjct: 206 GLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPI 265
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +S
Sbjct: 266 EIAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEIS 324
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I
Sbjct: 325 GDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTI 384
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+
Sbjct: 385 VDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGT 444
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA---- 472
AKQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA
Sbjct: 445 AKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCW 564
Query: 533 DDAELKKVKSSFP---SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA
Sbjct: 565 TDAQRQKFIDTYGGGLENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRREFIEENATYANID 652
>gi|153809174|ref|ZP_01961842.1| hypothetical protein BACCAC_03484 [Bacteroides caccae ATCC 43185]
gi|423220418|ref|ZP_17206913.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
gi|149128150|gb|EDM19370.1| DNA gyrase, B subunit [Bacteroides caccae ATCC 43185]
gi|392623495|gb|EIY17598.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
Length = 652
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 306/628 (48%), Positives = 427/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTADITGTRQQFWPDDTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I L R+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRITLTDRRVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLSYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|224024595|ref|ZP_03642961.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
gi|224017817|gb|EEF75829.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
Length = 656
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 310/634 (48%), Positives = 420/634 (66%), Gaps = 27/634 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTNVFRGGKVYQQ 150
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
+Y GKP+ + TC + GTR FWPD +FT ++ ++ + R+RELA
Sbjct: 151 EYECGKPLYPVKEVGTC------APGMTGTRQTFWPDGNIFTVT-EYKYSILQARMRELA 203
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDG 233
+LN +TI L + E + + F G++E+V++LN+ PL DV+ + G
Sbjct: 204 YLNKGITITLTDKRVKEEDGSFKQEVFHSEEGVKEFVRFLNSTNTPLIDDVIYLNTEKQG 263
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
I I+ A+ + + + + + Y N+I TI+GGTH G + +LTR L ++SK ++ +
Sbjct: 264 IPIECAIMY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTRVLKKYAEESKALEKAKV 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
+SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP
Sbjct: 323 EISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I+ K + A A +AA++AR+ V++KS + LPGKLADCSS PEE E+F+VEGDSA
Sbjct: 383 KVIVDKVVLAATARIAARKARESVQRKSPMGGGGLPGKLADCSSRNPEECELFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKE 471
GGSAKQGR R+FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV G++ K+
Sbjct: 443 GGSAKQGRSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGDEDSKK 502
Query: 472 A----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
A LRY+KIII+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK
Sbjct: 503 ANIDKLRYYKIIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIATPPLYKCSKGKI 562
Query: 528 VQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY D E + + N +++ QR+KGLGEM P QLWETT+NPE RMLKQ+ IE
Sbjct: 563 SEYCYTDEERQAFMQKYGDGSENGIHT-QRYKGLGEMNPEQLWETTMNPETRMLKQVHIE 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V R+E I+ A N+D
Sbjct: 622 NAAEADYIFSMLMGDDVAPRREFIEKNATYANID 655
>gi|393809323|gb|AFN25835.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809333|gb|AFN25840.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809337|gb|AFN25842.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809341|gb|AFN25844.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/619 (51%), Positives = 423/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIENDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V + YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHLNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR E D E+ + Y + GG++ YV+ LN +K+ +HD + + D I +++A
Sbjct: 208 GISITLRDEREDEEQREDT-YHYEGGIKSYVELLNENKESIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE
Sbjct: 267 IQYNS-GYATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K
Sbjct: 326 TREGLTAVVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+
Sbjct: 386 GIMASRARVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKE 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 446 GRDSKTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ + I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|404418103|ref|ZP_10999881.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
gi|403489506|gb|EJY95073.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
Length = 645
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 417/621 (67%), Gaps = 9/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYA I+V + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYADEIQVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V+ D +HQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYLDNKIHHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V+ D GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 148 AYKRGIP--QFDLKVIGETDGDTTGTAIRFKADPTIFTETTAYNYETLEQRIRELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
++I LR E E Y E YF+ GG++ YV+ LN +K+PLH+ + + D I ++
Sbjct: 206 GISITLRDERETLEDGSYREDSYFYEGGIKSYVEMLNENKEPLHEEPIYVHESKDEIEVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ S ++ +L YAN+I T +GGTH +G K +L+R LNS G KSK +K+ LSG
Sbjct: 266 IALQYNS-GFATNLLTYANNIHTYEGGTHEDGFKRALSRVLNSYGIKSKIIKEDKDRLSG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E +L +P+V I+
Sbjct: 325 EDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDKLFAELFERFLYENPNVARVIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AAK+AR++ R+KS L SSLPGKLADCSS PE+SEIFIVEGDSAGGS
Sbjct: 385 EKGIMASRARIAAKKAREVTRRKSALEVSSLPGKLADCSSKDPEKSEIFIVEGDSAGGST 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K GRD QAILPLRGKILNVE+ + N EI++++ A G G+ GE F RYHK
Sbjct: 445 KSGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMVTAFGTGIGGE-FDLSKARYHK 503
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL
Sbjct: 504 IIVMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNEREL 563
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA A+ F LM
Sbjct: 564 DKLKAELEPTPKWSIARYKGLGEMNADQLWETTMNPENRSMLQVTLEDAISADQTFEMLM 623
Query: 598 GARVDTRKELIQNAANLVNLD 618
G V+ R++ I++ A LD
Sbjct: 624 GDVVENRRQFIEDNAVYATLD 644
>gi|390454457|ref|ZP_10239985.1| DNA gyrase subunit B [Paenibacillus peoriae KCTC 3763]
Length = 639
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/623 (51%), Positives = 431/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY +I+V + DNSV+V DNGRGIP+ H
Sbjct: 31 MYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVHTDNSVTVTDNGRGIPVSEHAK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q
Sbjct: 91 MKKSALEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKMVVHVKRDGHVYEQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D GT+ F+PD+Q+FT +D++T+ RIRELAFLN
Sbjct: 149 EYHRGVP----QYDVRVIGDTDETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I+L +D + + + GG+ EYVQ+LN ++ LH+ V G R D I +
Sbjct: 205 GIAISL----TDERTGASDTFHYEGGISEYVQFLNQQREALHEQPIYVEGSR---DMIQV 257
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+
Sbjct: 258 EVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGMIKDSNANLT 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V +
Sbjct: 317 GDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRV 376
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ KSL A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGS
Sbjct: 377 VDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGS 436
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYH
Sbjct: 437 AKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDISKARYH 495
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + + D G +Y+ PPL+KVER K ++Y + E
Sbjct: 496 KVIIMTDADVDGAHIRTLLLTFFYRYMRKILDAGYVYIAQPPLFKVERNKVIRYANSEVE 555
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ F NA Y++QR+KGLGEM QLWETT++PE R + Q+ I DA A+ +F++L
Sbjct: 556 RDEIIREFGENAKYNVQRYKGLGEMNAAQLWETTMDPESRTMLQVTINDAMLADTLFNTL 615
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R++ IQ A V NLD
Sbjct: 616 MGDNVEPRRDFIQEHAKYVKNLD 638
>gi|357051619|ref|ZP_09112793.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
gi|355379543|gb|EHG26700.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
Length = 649
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/624 (50%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFATAIQVIIEEDNSITVVDDGRGIPVDIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGKFGG S LHGVG SVVNALS +L+V V+++G Y+Q
Sbjct: 95 TGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTTLDVKVYKEGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L +D DR GT + F PD ++FT F+ + +A R+RELAFLN
Sbjct: 153 EYHRGAVVEDLKV----IDETDRHGTTVHFVPDPEIFTETTVFNFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED E EY + GG++ YV+ LN K + + + + GIT++++
Sbjct: 209 GLKISI--EDKREEHPVLKEYHYDGGIKSYVEHLNASKTVIFPEPIYLEGEQQGITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + +L +AN+I T +GGTH G K +LTR +N +KSK +K+ D +L+GE
Sbjct: 267 LQY-TDSYHNNLLSFANNIHTYEGGTHESGFKTALTRVINDYARKSKLMKENDENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ T++L +P V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFTKFLMENPAVGRQVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA AAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GLLASKARQAAKRAREMTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNIHYIQPGKNAEQ 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK S P+ S+QR+KGLGEM QLWETT++PE RM+ ++ ++DA EA+ +F
Sbjct: 565 DLKNTIESLPATPKPSVQRYKGLGEMDDHQLWETTMDPENRMMLRVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|89101114|ref|ZP_01173950.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
gi|89084169|gb|EAR63334.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
Length = 640
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 430/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY S I V + DNS++V D+GRGIP+ +H
Sbjct: 31 MYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEINVIIEKDNSITVVDDGRGIPVGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVRRDGKLHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG P L + + GT I F PD ++FT +++++ +A RIRELAFLN
Sbjct: 149 KFERGVPAADLKV----IGEAEETGTTIHFKPDGEIFTETLEYEYEILANRIRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I + ED E N+ +EYF+ GG++ YV+ LN K+ LH+ + + +GIT+++A
Sbjct: 205 GLKITI--EDKRAE-NKKSEYFYEGGIKSYVEHLNRTKEVLHEEPIYIEGEKEGITVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D ++ + YAN+I T +GGTH G K +LTR +N +K+ KD D +LSGE
Sbjct: 262 IQY-NDGFTGNIYSYANNIHTYEGGTHESGFKTALTRVINDYARKNGIFKDSDANLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ P+P+FEGQTKT+LGN EVR V D ++ ++L +P V ++ K
Sbjct: 321 VREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRTVTDTFFSDHFEKFLMENPQVARKVVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQ
Sbjct: 381 GLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I A G G+ G+DF+ RYHKI+
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITAAGTGI-GDDFEISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPLYKV++GK+V+Y Y+D +L +
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYIYIAQPPLYKVQQGKRVEYAYNDKQLDQ 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P +IQR+KGLGEM P QLWETT++P R L Q+ +EDA EA+ F LMG
Sbjct: 560 IFEELPKAPKPNIQRYKGLGEMNPEQLWETTMDPGTRTLLQVSLEDAIEADETFEILMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R++ I+ NA + NLD
Sbjct: 620 KVEPRRQFIEDNAVYVKNLD 639
>gi|254168966|ref|ZP_04875805.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|197622072|gb|EDY34648.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 648
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 328/634 (51%), Positives = 434/634 (68%), Gaps = 30/634 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHL+YE++DN++DEA AGY S I V + D SVSV D+GRGIP+D+HP
Sbjct: 28 MYIGSTDERGLHHLIYEVVDNSIDEALAGYCSRINVIIHKDGSVSVEDDGRGIPVDMHPE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAG KF Y ++GGLHGVG+ VVN LSE L+ + RDG Y Q
Sbjct: 88 KGKSALEVVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKAYIKRDGKIYFQ 145
Query: 121 KYSRGKPVTTLTC--------HVLPVDSKDRQ-----GTRIRFWPDKQVFTTAIQFDHNT 167
Y RGKP + V D D + GT IRF PD ++F T +F ++
Sbjct: 146 WYERGKPQCDVHVVGKIENGNFVWIEDGHDEKFKYSRGTYIRFKPDAEIFETT-EFKYSI 204
Query: 168 IAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVV 225
+ ++R+LAFLN + IAL E S + E F + GG+ E+V++LN P+H DVV
Sbjct: 205 VKKKLRDLAFLNRGIEIALEDERSGKK-----EIFKYDGGIVEFVKFLNEGYNPIHRDVV 259
Query: 226 GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 285
+ + DGI ++ A+Q+ +D+ S+ +L + N+I T++GGTH+ G +++LT+ +N K
Sbjct: 260 YGKDEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVEGGTHVSGFRSALTKVINDFAKSR 318
Query: 286 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 345
+K D SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V + L+ Y
Sbjct: 319 NLLKGID-SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSIVNKILSTY 377
Query: 346 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 405
E HPDV +I+SK+++A +A +AA++AR+L R+K L S LPGKLADCS PE +E+
Sbjct: 378 FEEHPDVATNIVSKAIAAARARIAARKARELARRKGYLESLDLPGKLADCSEENPERAEL 437
Query: 406 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG 465
FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G GV+
Sbjct: 438 FIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTGVR- 496
Query: 466 EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 525
EDF LRY KIII+TDADVDGAHIRTLLLTFFYRY L ++G IY+ PLY++++G
Sbjct: 497 EDFDYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMPELIEKGHIYIAQAPLYRIQKG 556
Query: 526 KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
K + Y Y D E ++ NA S+QRFKGLGEM P QLW+TT+NPE R L ++ IED
Sbjct: 557 KNIYYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMNPQQLWDTTMNPETRRLIRVTIED 613
Query: 586 AAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 618
AAEA+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 614 AAEADRLFSILMGEQVGPRREFIIQHAKEVMNID 647
>gi|310639477|ref|YP_003944235.1| DNA gyrase subunit b [Paenibacillus polymyxa SC2]
gi|386038696|ref|YP_005957650.1| DNA gyrase subunit B [Paenibacillus polymyxa M1]
gi|309244427|gb|ADO53994.1| DNA gyrase subunit B [Paenibacillus polymyxa SC2]
gi|343094734|emb|CCC82943.1| DNA gyrase subunit B [Paenibacillus polymyxa M1]
Length = 636
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/623 (51%), Positives = 436/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY ++I+V + DNS++V DNGRGIP+ H
Sbjct: 28 MYIGSTSVKGLHHLVWEVVDNSIDEALAGYCNSIQVVVHKDNSITVTDNGRGIPVSEHAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFGG VSGGLHGVG+SVVNALS + V V RDG Y Q
Sbjct: 88 MKKSALEVVMTVLHAGGKFGGGGY--KVSGGLHGVGVSVVNALSSKMIVHVKRDGHVYEQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + + GT+ F+PD+Q+FT +D++T+ RIRELAFLN
Sbjct: 146 EYHRGAP----QYDVRVIGDTEETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I+L +D + + + GG+ EYVQ+LN ++ LH+ V G R D I +
Sbjct: 202 GIAISL----TDERTGASDTFHYEGGISEYVQFLNQKREALHEQPIYVEGSR---DMIQV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+
Sbjct: 255 EVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDNNANLT 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V +
Sbjct: 314 GDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRV 373
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ KSL A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGS
Sbjct: 374 VDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYH
Sbjct: 434 AKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDITKARYH 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + + D G IY+ PPL+KVER K V+Y +AE
Sbjct: 493 KVIIMTDADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIAQPPLFKVERNKVVRYANSEAE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ F NA Y++QR+KGLGEM QLWETT++PE R + Q+ + DA A+ +F++L
Sbjct: 553 RDEIIKEFGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTVSDAMLADTLFNTL 612
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R++ IQ A V NLD
Sbjct: 613 MGDNVEPRRDFIQEHAKYVKNLD 635
>gi|257127028|ref|YP_003165142.1| DNA gyrase subunit beta [Leptotrichia buccalis C-1013-b]
gi|257050967|gb|ACV40151.1| DNA gyrase, B subunit [Leptotrichia buccalis C-1013-b]
Length = 660
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/644 (48%), Positives = 428/644 (66%), Gaps = 35/644 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN+VDEA AG I V +L N + V+DNGRGIP+ +H
Sbjct: 25 MYIGSTSSRGLHHLVWEIVDNSVDEALAGICDKITVKILEGNIIEVSDNGRGIPVGMHK- 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LE TV RDG + Q
Sbjct: 84 TGKSTLEVVLTVLHAGGKF--DNDNYKVSGGLHGVGVSVVNALSEWLEATVTRDGKIFRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T + V GT +RF D ++F T + +D++ + R++ELA+LN
Sbjct: 142 TYERGVP--TSPVEEIGVADDSAHGTVVRFKADDEIFETTV-YDYSVLESRLKELAYLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR--------KDVD 232
L I L E + E + E+ F GG+++++ + ++K + DV+ K+V+
Sbjct: 199 GLKIELADE-RNAENVKAEEFLFEGGIKDFLNEIIDEEKIIDDVIYMADTMQIEEAKEVE 257
Query: 233 G----------------ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 276
+ +++A+ + + + +T+ + N+I T +GGTH+ G + +LTR
Sbjct: 258 AEDENGNIVIKQRSAKFVEVEIAMNYTT-SQRETVYSFVNNINTHEGGTHVSGFRTALTR 316
Query: 277 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 336
T+N + K+ +KDK+ + G VREGL C+ISV++P P+FEGQTKT+LGN EV +V
Sbjct: 317 TINDIAKQMNLIKDKNGTFQGTDVREGLVCVISVKIPEPQFEGQTKTKLGNSEVTGIVSN 376
Query: 337 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 396
V L YLE HP + ++ K + + +A AAK+AR+LV +K+ L SLPGKLADCS
Sbjct: 377 IVGSNLKFYLEDHPKAAEKVIEKMVMSKRAREAAKKARELVLRKNTLEVGSLPGKLADCS 436
Query: 397 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 456
S P ESEIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILNVE+ +N EI+ +I
Sbjct: 437 SKDPAESEIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEKSGIHKALENAEIRAMI 496
Query: 457 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 516
A G G GE+ + LRYHKI+I+TDADVDGAHIRTL+LTFFYR+ + L +EG IY+
Sbjct: 497 TAFGAGF-GEEIDLKKLRYHKIVIMTDADVDGAHIRTLMLTFFYRHLRELINEGYIYIAQ 555
Query: 517 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQ 575
PPLYK++ GK ++Y Y D ++K+V + Y+IQR+KGLGEM P QLWETTL+PE
Sbjct: 556 PPLYKIQAGKAIRYAYSDDQMKQVTRVLENEGRKYTIQRYKGLGEMNPEQLWETTLDPEV 615
Query: 576 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 618
R L ++ +EDA+ A+ +F+ LMG +V+ R++ I++ AN V NLD
Sbjct: 616 RTLLKVSMEDASYADKMFNILMGDKVEPRRKFIEDNANYVRNLD 659
>gi|403385778|ref|ZP_10927835.1| DNA gyrase subunit B [Kurthia sp. JC30]
Length = 639
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/619 (49%), Positives = 421/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYA++I VA+ DN + V DNGRGIP+D
Sbjct: 30 MYIGSTSSKGLHHLVWEIVDNSIDEALAGYATDIVVAIEKDNWIRVEDNGRGIPVDTQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++TVLHAGGKFGG S LHGVG SVVNALS V V RDG +
Sbjct: 90 VGKPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTETIVQVHRDGHIHEI 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RGK V L + D GT RF D ++F ++ + +A R+RELA+LN
Sbjct: 148 KFERGKTVQPLKV----IGDTDHNGTTTRFKADPEIFKETTVYEFDILAHRVRELAYLNR 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I++ E E+ N+Y + GG++ YV+ +N K+P+H+ + + + DGI+I++A+
Sbjct: 204 GIRISIIDEREGQERR--NDYHYEGGIKSYVEHMNEKKEPIHEAIDLKGEKDGISIEIAM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ + ++ + +AN+I T +GGTH G K +LTR +N +KS +K D +LSGE V
Sbjct: 262 QYNA-GFASNIFSFANNINTYEGGTHESGFKTALTRVINDYARKSNLLKAADANLSGEDV 320
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL I+S++ P+P+FEGQTKT+LGN EV + + E+ +L +P V +I+ K
Sbjct: 321 REGLIAIVSIKHPDPQFEGQTKTKLGNSEVSAITNSLFSEHFERFLLENPSVARTIVDKG 380
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEE E++IVEGDSAGGSAK G
Sbjct: 381 LIASRARVAAKKAREMTRRKSALEVSSLPGKLADCSSRHPEECEMYIVEGDSAGGSAKSG 440
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N EI+ +I A+G G+ GEDF E RYHK++I
Sbjct: 441 RDRHFQAILPLRGKILNVEKARLDRILSNAEIRAMITAIGTGI-GEDFNLEKARYHKVVI 499
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFF+R+ + L + G IYV PPLY+V++GK V+YCY DAEL+++
Sbjct: 500 MTDADVDGAHIRTLLLTFFFRFMRPLIEAGYIYVAQPPLYQVKQGKHVEYCYSDAELQEI 559
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
P +QR+KGLGEM QLW+TT++PE R+L Q+ ++DA EA+ F LMG
Sbjct: 560 VGRLPQQPKPMVQRYKGLGEMNADQLWDTTMDPEHRVLLQVELDDALEADRAFEDLMGDD 619
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R++ I +NA + NLD
Sbjct: 620 VEPRRQFIHENAVYVENLD 638
>gi|334338619|ref|YP_004543599.1| DNA gyrase subunit B [Desulfotomaculum ruminis DSM 2154]
gi|334089973|gb|AEG58313.1| DNA gyrase, B subunit [Desulfotomaculum ruminis DSM 2154]
Length = 639
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 429/620 (69%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY S IEV + DNSV+V D+GRGIP+ +
Sbjct: 31 MYIGSTSARGLHHLVYEVVDNSIDEALAGYCSRIEVIIHKDNSVTVEDDGRGIPVGIQSK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHAGGKFGG S LHGVG+SVVNALS LEV + DG Y+Q
Sbjct: 91 VGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSELEVEIKLDGNLYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG PVT L + GT+I F PD+++F + F TI+ R+RELA+LN
Sbjct: 149 KYSRGIPVTELKI----IGKSKSTGTKITFKPDEEIFEELV-FSLETISQRMRELAYLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I LR E + E Q +Y GG++++V+ LN +K+ LH + + + +++++A
Sbjct: 204 GIKIILRDERKETENEQVFQY--EGGIQDFVKHLNRNKQVLHAKPIYLSGEKEYVSVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+YS+TML YAN+I T +GGTH G K +LTR +N G+ +K+ D +L GE
Sbjct: 262 MQY-NDSYSETMLSYANNIHTTEGGTHEVGFKTALTRIINDYGRTHNILKNNDPNLIGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG T +ISV+VP P+FEGQTKT+LGN EVR +VD E L+ YLE +P V I+ K
Sbjct: 321 IREGATIVISVKVPEPQFEGQTKTKLGNSEVRGIVDSIFSEALSTYLEENPSVAKKIIEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A +A AA++AR+L R+KS L + SLPGKLADCS P E+++VEGDSAGGSAKQ
Sbjct: 381 GVTASRAREAARKARELTRRKSALETMSLPGKLADCSEKDPSLCELYLVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ GEDF RYHKI+
Sbjct: 441 GRDRRFQAILPLRGKILNVEKARMDKILANEEIRAMITALGCGI-GEDFDISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLL+TFFYR+ + L + G +YV PPLY+ +GK Y Y D EL++
Sbjct: 500 IMTDADVDGSHIRTLLMTFFYRHMRELIEAGYLYVAQPPLYRARKGKHDSYLYSDEELEQ 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDA EA+ FS LMG
Sbjct: 560 LLKRIGYDNV-NIQRYKGLGEMNPEQLWETTMDPDTRTMLQVTLEDALEADATFSMLMGD 618
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ RK+ IQ A V NLD
Sbjct: 619 RVEPRKDFIQENARYVRNLD 638
>gi|375311491|ref|ZP_09776746.1| DNA gyrase subunit b [Paenibacillus sp. Aloe-11]
gi|375076671|gb|EHS54924.1| DNA gyrase subunit b [Paenibacillus sp. Aloe-11]
Length = 634
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/623 (51%), Positives = 436/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY ++I+V + DNS++V DNGRGIP+ H
Sbjct: 26 MYIGSTSVKGLHHLVWEVVDNSIDEALAGYCNSIQVIVHTDNSITVTDNGRGIPVSEHAK 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFGG VSGGLHGVG+SVVNALS + V V RDG Y Q
Sbjct: 86 MKKSALEVVMTVLHAGGKFGGGGY--KVSGGLHGVGVSVVNALSSKVIVHVKRDGHVYEQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D GT+ F+PD+Q+FT +D++T+ RIRELAFLN
Sbjct: 144 EYHRGVP----QYDVRVIGDTDETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I+L +D + + + GG+ EYVQ+LN ++ LH+ V G R D I +
Sbjct: 200 GIAISL----TDERTGASDTFHYEGGISEYVQFLNQQREALHEQPIYVEGSR---DMIQV 252
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+
Sbjct: 253 EVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDSNANLT 311
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V +
Sbjct: 312 GDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRV 371
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ KSL A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGS
Sbjct: 372 VDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGS 431
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYH
Sbjct: 432 AKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDISKARYH 490
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + + D G +Y+ PPL+KVER K ++Y +AE
Sbjct: 491 KVIIMTDADVDGAHIRTLLLTFFYRYMRKILDAGYVYIAQPPLFKVERNKVIRYANSEAE 550
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ F NA Y++QR+KGLGEM QLWETT++PE R + Q+ I DA A+ +F++L
Sbjct: 551 RDEIIREFGENAKYNVQRYKGLGEMNAAQLWETTMDPESRTMLQVTINDAMLADTLFNTL 610
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R++ IQ A V NLD
Sbjct: 611 MGDNVEPRRDFIQEHAKYVKNLD 633
>gi|397690038|ref|YP_006527292.1| DNA gyrase subunit B [Melioribacter roseus P3M]
gi|395811530|gb|AFN74279.1| DNA gyrase subunit B [Melioribacter roseus P3M]
Length = 663
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/648 (48%), Positives = 434/648 (66%), Gaps = 46/648 (7%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHL+ E++DN++DEA AG+ + V + D SV+V D GRGIP+D+HP
Sbjct: 31 MYIGDVGSRGLHHLINEVVDNSIDEALAGFNDTVIVTIHKDQSVTVEDYGRGIPVDIHPV 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE L+V V RDG Y Q
Sbjct: 91 EKKSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWLKVEVRRDGKIYTQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDS-----KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIREL 175
+Y RG P PV K + GT+I F PDK++F T ++F + +A R+REL
Sbjct: 149 EYKRGVPQG-------PVKETGTYKKGKSGTKITFKPDKEIFKT-VKFKYEIVAERLREL 200
Query: 176 AFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGIT 235
A+LN +T+ L E+ E+ +Y F GGL ++V++L+ + PLH + + +G
Sbjct: 201 AYLNKDVTMILIDENEGIEE----KYHFKGGLIDFVRYLDEQRNPLHKPIYIEGEKEGTP 256
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-IS 294
+++A ++ SD+Y++ + Y N+I TI+GGTH+ G + +LTRT N+ K+K +K+ IS
Sbjct: 257 VEVAFEY-SDSYNENVHTYVNNINTIEGGTHLVGFRTALTRTFNNYAYKNKLIKENSKIS 315
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L+GE +EGLT +ISV+V P+FEGQTKT+LGN EV+ +V+ V E L EYLE +P V
Sbjct: 316 LTGEDFKEGLTAVISVKVMEPQFEGQTKTKLGNSEVKSIVESIVGEKLAEYLEENPSVAK 375
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ KS+ A +A AA++AR+L+R+K+ L S +LPGKLADCS PE EI+IVEGDSAG
Sbjct: 376 KIIEKSVKAAEAREAARKARELIRRKNALDSLNLPGKLADCSINDPEHCEIYIVEGDSAG 435
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDRRFQAILP++GKI+NVE+ + +N+EIQ +I A+G G+ GEDF R
Sbjct: 436 GSAKQGRDRRFQAILPIKGKIINVEKAKINKILENQEIQAIISAIGAGI-GEDFDASKSR 494
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y KII++TDADVDG+HIRTLLLTFFYR+ K L ++G +Y+ PPLYK+++GK+ Y +DD
Sbjct: 495 YGKIILMTDADVDGSHIRTLLLTFFYRHMKDLINQGKVYIAQPPLYKIKKGKEEFYAFDD 554
Query: 535 AE----LKKVKSSFPSNALYS--------------------IQRFKGLGEMMPVQLWETT 570
E LK++K I R+KGLGEM P QLW+TT
Sbjct: 555 EERDAILKRLKGDVKGKEEEEEIADVEETEEQTQKQMKGIVISRYKGLGEMNPEQLWQTT 614
Query: 571 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+NPE R + Q+ +E AA A+ +F +LMG V+ R+E I+ A LD
Sbjct: 615 MNPETRTILQVNLESAATADKIFETLMGDAVEPRREFIEKHAKYAKLD 662
>gi|374321361|ref|YP_005074490.1| DNA gyrase subunit B [Paenibacillus terrae HPL-003]
gi|357200370|gb|AET58267.1| DNA gyrase subunit B [Paenibacillus terrae HPL-003]
Length = 636
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 325/623 (52%), Positives = 431/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AGY +I+V + DNSV+V DNGRGIP+ H
Sbjct: 28 MYIGSTSAKGLHHLVWEVVDNSIDEALAGYCDSIQVVVHEDNSVTVTDNGRGIPVSEHAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFGG VSGGLHGVG+SVVNALS + V V RDG Y Q
Sbjct: 88 MKKSALEVVMTVLHAGGKFGGGGY--KVSGGLHGVGVSVVNALSSKMIVHVKRDGHMYEQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D GT+ F+PD Q+FT +D+ T+ RIRELAFLN
Sbjct: 146 EYHRGVP----QYDVRVIGDTDETGTQTTFYPDDQIFTETTVYDYETLQTRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I+L +D + + + GG+ EYVQ+LN ++ LH+ V G R D I +
Sbjct: 202 GIAISL----TDERTGASDMFHYEGGISEYVQFLNQKREALHEQPIYVEGSR---DMIQV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD +L+
Sbjct: 255 EVALQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGFIKDNTANLT 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V +
Sbjct: 314 GDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRV 373
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ KSL A +A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGS
Sbjct: 374 VDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYH
Sbjct: 434 AKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDIAKARYH 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLTFFYRY + + D G +Y+ PPL+KVER K V+Y +AE
Sbjct: 493 KVIIMTDADVDGAHIRTLLLTFFYRYLRKIIDAGYVYIAQPPLFKVERNKVVRYANSEAE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ S F NA Y++QR+KGLGEM QLWETT++PE R + Q+ I DA A+ +F +L
Sbjct: 553 RDTIISEFGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTISDAMLADTMFDTL 612
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R++ IQ A V NLD
Sbjct: 613 MGDNVEPRRDFIQEHAKYVKNLD 635
>gi|157363918|ref|YP_001470685.1| DNA gyrase subunit B [Thermotoga lettingae TMO]
gi|157314522|gb|ABV33621.1| DNA gyrase, B subunit [Thermotoga lettingae TMO]
Length = 630
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 309/626 (49%), Positives = 417/626 (66%), Gaps = 23/626 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN++DE AG+ + I V L DN+V + DNGRGIP+D HP
Sbjct: 24 MYIGSTGKSGLHHLVYEIVDNSIDEVMAGFCNTIRVTLFEDNTVEIEDNGRGIPVDTHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T +SALE V+T LHAGGKF S + Y VSGGLHGVG SVVNALSE LEV + ++G Y+Q
Sbjct: 84 TGRSALEVVMTTLHAGGKF--SKNIYKVSGGLHGVGASVVNALSEILEVWIHKEGKIYYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG P C V + D+QGT +RF PD Q+F+ ++FD + I ++RELAFLNP
Sbjct: 142 KYSRGFP----QCEVTVIGETDKQGTIVRFKPDDQIFSI-LKFDPDLIENKLRELAFLNP 196
Query: 181 KLTIALRKEDSDPEKNQYNEY----FFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 236
++ I ++ NEY + GGL EY ++L + +KP+H+ + ++D I +
Sbjct: 197 QVKIIF--------EDLANEYTVTMHYEGGLREYARYLASGRKPIHETIEVSGELDEIIV 248
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+A+ + + + YAN+IRTID GTH+ K + T+ LN + +K KD S S
Sbjct: 249 KIAIMYTDSYEEEKIYSYANNIRTIDHGTHVTAFKNTFTKMLNEYARSLGILK-KDESFS 307
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGL I++V + PEFEGQTK++LG+ V + ++E L+EY E++ VL I
Sbjct: 308 GEDVREGLIAIVTVLMKEPEFEGQTKSKLGSESAGIAVSRILKEKLSEYFEVNKQVLKVI 367
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L K L ++A AA++AR+L R+K+ + + SLPGKLADC S+ E SE+FIVEGDSAGGS
Sbjct: 368 LEKVLKTMRAREAARKARELARRKNAMENLSLPGKLADCVSSNVENSELFIVEGDSAGGS 427
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ RDR +QAILPLRGKILNVE+ + NE+I+++I A+G G+ G+ F LRY
Sbjct: 428 AKQARDREYQAILPLRGKILNVEKSSMQKLLANEQIKDIIVAVGTGI-GDSFDSSKLRYG 486
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDAD+DGAHIRTLLLTFF+RY K L ++G IY+ VPPLYKV Y Y + +
Sbjct: 487 KIIIMTDADIDGAHIRTLLLTFFFRYMKPLIEDGRIYIAVPPLYKVSFSSNSVYVYTEED 546
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ ++ +QR+KGLGEM P QLWETT+NPE R L Q+ IE+A EA+ +F L
Sbjct: 547 FQALRRELGEERKLEVQRYKGLGEMNPEQLWETTMNPETRKLIQVNIENAEEADALFEIL 606
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG R+ I+ A + + +LD+
Sbjct: 607 MGESPSERRRFIERHA--LKVTYLDV 630
>gi|385808591|ref|YP_005844987.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
gi|383800639|gb|AFH47719.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
Length = 665
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/648 (48%), Positives = 431/648 (66%), Gaps = 43/648 (6%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHL+ E++DN++DEA AG+ + V L D SVSV D GRGIP+D+HP
Sbjct: 30 MYIGDVGTRGLHHLINEVVDNSIDEALAGFNDRVIVTLHKDGSVSVEDRGRGIPVDIHPV 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF +S Y VSGGLHGVG+SVVNALSE ++V V RD Y Q
Sbjct: 90 EKKSALEVVMTVLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSEWMKVEVRRDNKIYFQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PV + + D+ GT+I F PDK +F +F+ T+A R+RELA+LN
Sbjct: 148 EYRRGVPVEKVKE--IGTYKGDQTGTKITFMPDKTIFKVT-KFNFETVAERLRELAYLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+T+ L+ E+ E+ Y F GGL ++V++L+ ++P+H + + + +++A
Sbjct: 205 DVTMILKDENDGTEET----YRFKGGLIDFVKYLDEQREPIHKPIYIEGEKENTPVEIAF 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
++ S++YS+ + Y N+I TI+GGTH+ G + +LTRT N+ K+ +K+ I+L+G+
Sbjct: 261 EY-SNSYSENVHSYVNNINTIEGGTHLVGFRTALTRTFNNYAYKNGLIKENSKITLTGDD 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV+V P+FEGQTKT+LGN EV+ VV+ V E L+EYLE +P V I+ K
Sbjct: 320 FREGLTAVVSVKVMEPQFEGQTKTKLGNSEVKSVVETIVGEKLSEYLEQNPSVAKKIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A AA++AR+LVR+K+ L S LPGKLADCS T PE EI+IVEGDSAGGSAKQ
Sbjct: 380 SLKAAEAREAARKARELVRRKNALDSMHLPGKLADCSITDPEHCEIYIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILP++GKILNVE+ + +N+EIQ ++ A+G G+ GEDF RY KII
Sbjct: 440 GRDRRFQAILPIKGKILNVEKAKLNKILENQEIQAIVAAIGAGI-GEDFDPTKSRYGKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFFYR+ K L G +Y+ PPLYKV++GK+ + +DD EL +
Sbjct: 499 LMTDADVDGSHIRTLLLTFFYRHMKELITSGRVYIAQPPLYKVKKGKEEVFAFDDEELDQ 558
Query: 540 VKSSF-----------------------------PSNALYSIQRFKGLGEMMPVQLWETT 570
+ F P + I R+KGLGEM P QLW TT
Sbjct: 559 ILKRFKADGKAAKAKLKEIETEGEQVIETDEEGQPKGVV--ITRYKGLGEMNPEQLWSTT 616
Query: 571 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+NPE R + Q+ +E AA A+ +F +LMG V+ R+E I+ A NLD
Sbjct: 617 MNPETRTILQVNLESAAAADKIFETLMGDAVEPRREFIEKHAKYANLD 664
>gi|224536623|ref|ZP_03677162.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223514|ref|ZP_17209983.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
gi|224521714|gb|EEF90819.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638394|gb|EIY32235.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
Length = 653
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 302/629 (48%), Positives = 429/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P+ V + + D GTR +FWPD +FT + +++ +A R+RELA+LN
Sbjct: 151 EYECGHPLYP----VKEIGTSDITGTRQQFWPDNTIFTETV-YNYEILATRMRELAYLNA 205
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L D E N E F++ GL+E+V+++++ ++ L +DV+ + G ++
Sbjct: 206 GIKITLTDLRVKDEENNAKMEVFYSEEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G
Sbjct: 266 VAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP ++
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVMGAVDQAVGEALNYYLEEHPKEAKMVV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGRDRRFQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRDRRFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY K+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIRNGYLYIATPPLYLCKKGKVEEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLW TT+NPE RMLKQ+ IE+AAE
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWSTTMNPENRMLKQISIENAAEV 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R++ I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|294849833|ref|ZP_06790573.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
gi|294823381|gb|EFG39810.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
Length = 644
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/619 (52%), Positives = 427/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L VD+ D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVDTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|304439074|ref|ZP_07398993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372433|gb|EFM26020.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 637
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/621 (50%), Positives = 429/621 (69%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHL+YE++DN++DEA G IEV +L D SVSV+DNG GIP++ HP
Sbjct: 27 MYIGSTGPKGLHHLIYEVVDNSIDEALQGMCDTIEVTILKDGSVSVSDNGSGIPVEKHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF Y VSGGLHGVG+SVVNALS L V R+ Y Q
Sbjct: 87 TGKSTVETVLTILHAGGKF--KEGAYKVSGGLHGVGVSVVNALSTKLVAEVKRNKKLYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++SRG P T L V+ +D GT I F PD ++F T ++F+ + R RE+AFLN
Sbjct: 145 EFSRGVPQTEL--EVVEDLKEDVTGTTIIFHPDPEIFET-VEFEFEVLEKRFREMAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I E D ++ + + GG++ +V+++N K +H DV+ F + + +++A
Sbjct: 202 NVKIIFTDERVDRQEI----FHYEGGIKSFVEYINRKKTKIHKDVIYFEELAENTQVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+YS+ +L +AN+I T +GGTH+ G +AS+TRT+N G+K +K+K+ +LSG+
Sbjct: 258 IQY-TDSYSENVLTFANNINTEEGGTHLSGFRASVTRTINDYGRKYNIIKEKEENLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IISV++PNP+FEGQTK++LGN E R +VD V LT YLE +P V IL K
Sbjct: 317 VREGMTAIISVKIPNPQFEGQTKSKLGNSETRGIVDGVVSNGLTAYLEENPKVAKIILDK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++ARDL R++S+L S +LPGKL DC + +EIF+VEGDSAGG+AK
Sbjct: 377 ALQARRAREAARKARDLTRKRSILDSMTLPGKLKDCHESDISVNEIFLVEGDSAGGTAKD 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD QA+LPLRGKI+NVE+ + ++EI+ +I A G G+ E F LRY KII
Sbjct: 437 GRDSNIQAVLPLRGKIMNVEKARLDKILNSDEIKAMITAFGTGIDKE-FDINNLRYGKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDDAELK 538
I+TDADVDGAHI TLLLTFF+R+ K L + G IYV PPLY V+RG++V +YCYDD EL+
Sbjct: 496 IMTDADVDGAHIMTLLLTFFFRHMKPLIEHGHIYVAKPPLYGVKRGEKVIRYCYDDEELE 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + Y I R+KGLGEM QLWETT+NP+ R+L ++ IED +A+ VFS+LMG
Sbjct: 556 SALNELGRDKNYKIARYKGLGEMNAEQLWETTMNPDSRILLRVNIEDVLDADDVFSTLMG 615
Query: 599 ARVDTRKELI-QNAANLVNLD 618
V+ R+E I +NA N+D
Sbjct: 616 VDVEPRREFIEENAKYAENID 636
>gi|302388606|ref|YP_003824427.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
gi|302199234|gb|ADL06804.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
Length = 637
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/623 (50%), Positives = 436/623 (69%), Gaps = 18/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ NI V + D S++V D+GRGIP+ +HP
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGFCKNILVTINKDGSITVDDDGRGIPVKIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K ALE LT+LHAGGKFG + GY VSGGLHGVG+SVVNALS+ LEV V RDG +Y Q
Sbjct: 87 VGKPALEVALTMLHAGGKFG--TGGYKVSGGLHGVGVSVVNALSKWLEVEVKRDGFKYFQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKPVT V + GT+I F PD Q+F F+++ +A R+RE AFLN
Sbjct: 145 RYERGKPVT----EVKKIGEASDTGTKITFMPDDQIFEDT-SFNYDILAQRLREQAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG---ITID 237
L I ++ D + + + GG+ +V++LN +K LH+ + + ++
Sbjct: 200 GLKIEIK----DLRTGKEQVFHYEGGIVSFVKYLNRNKDVLHEDPIYMRAASQEGEWEVE 255
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ +D+Y++ +L +AN+I T +GGTH+ G K++LTR++N +K +K++D +LSG
Sbjct: 256 VALQY-NDSYAENVLSFANNINTQEGGTHLVGFKSALTRSINDYARKMNLLKEQDPNLSG 314
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREGLT +ISV++ NP+FEGQTKT+LGN E+R +V+ V + + +LE +P V I+
Sbjct: 315 DDVREGLTAVISVKLVNPQFEGQTKTKLGNSEMRGIVESVVGDAMNRFLEENPSVARVIV 374
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++SA +A AA++AR+LVR+K+ L +SLPGKLADC P E+++VEGDSAGGSA
Sbjct: 375 EKAISAARAREAARKARELVRRKNALDRTSLPGKLADCREKDPRLCELYLVEGDSAGGSA 434
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRD RFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G+DF E LRYHK
Sbjct: 435 KQGRDPRFQAILPLRGKILNVEKARLDKILGNEEIRAMITALGTGI-GDDFDIEKLRYHK 493
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II++ DADVDGAHIRTLLLTF YRY + L + G +Y+ PPLY+V +GK+V Y Y D EL
Sbjct: 494 IILMADADVDGAHIRTLLLTFLYRYMRPLIEAGMVYIAQPPLYQVSKGKEVYYAYSDEEL 553
Query: 538 KKVKSSFPSNALYS-IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
K + + + ++RFKGLGEM QLW+TT+NP+ R + ++ +EDA EA+ +F+ L
Sbjct: 554 KAILERLGKDRDKAEVKRFKGLGEMNADQLWDTTMNPKTRTILKVNLEDAIEADEIFTIL 613
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I ++AA + NLD
Sbjct: 614 MGEKVEPRRQFIFEHAAEVRNLD 636
>gi|340759260|ref|ZP_08695832.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
gi|251835455|gb|EES63995.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
Length = 635
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/621 (50%), Positives = 420/621 (67%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DNAVDEA AGY I V +L DN + V DNGRGIP+ +HP
Sbjct: 25 MYIGTTSERGLHHLVWEIVDNAVDEALAGYCDKIVVNILPDNIIEVIDNGRGIPVGIHPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALS +VTV DG ++Q
Sbjct: 85 YNKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSLWTDVTVKTDGKIWYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY+RG P V + GT +RF D ++F T I +D+NT+ R++ELA+LN
Sbjct: 143 KYNRGVP----EEDVKEIGVTTEHGTTVRFKADHEIFETLI-YDYNTLKNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-KKPLHDVVGFRKDVDGITIDLA 239
L I L +P K + E+ F GG+ ++++ + + +K + + + +VD + +D+A
Sbjct: 198 GLEIHLSDSRKEPYKKE--EFKFEGGIVDFLKEITEETEKLIPEPIYMTGEVDNVAVDIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + S+ + + N+I T +GGTH+ G + +LTR +N +GK +K+KD L G
Sbjct: 256 FLYTVNQ-SEIIYSFVNNINTHEGGTHVSGFRTALTRVINDVGKAQGYLKEKDGKLQGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T I+SV+VP P+FEGQTKT+LGN EV +V V L LE +P+ I+ K
Sbjct: 315 IREGVTAIVSVKVPQPQFEGQTKTKLGNSEVTGIVSTLVGTNLKIVLEDNPNDTKIIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADCSS P+E EI+IVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCSSKNPDECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKILNVE+ +N E++ +I A G + G+ F E LRY KII
Sbjct: 435 GRDRSHQAILPLRGKILNVEKAGLHKSLENNEVRAMITAFGTSI-GDSFNIEKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTF YR+ L G +Y+ PPLYK+ GKQ++Y Y D ELK+
Sbjct: 494 LMTDADVDGAHIRTLLLTFIYRFMVDLIYNGNVYIAQPPLYKITTGKQIRYAYSDRELKE 553
Query: 540 VKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ F + Y++QR+KGLGEM P QLWETT+NP+ R L Q+ I+DA A+++F LMG
Sbjct: 554 ITDVFEGDDKKYTLQRYKGLGEMNPEQLWETTMNPDTRTLLQVTIDDARAADMLFDKLMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+VD R+E I +NA + NLD
Sbjct: 614 DKVDPRREFIEENAVYVKNLD 634
>gi|326802621|ref|YP_004320439.1| DNA gyrase subunit B [Aerococcus urinae ACS-120-V-Col10a]
gi|326650211|gb|AEA00394.1| DNA gyrase, B subunit [Aerococcus urinae ACS-120-V-Col10a]
Length = 660
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/619 (51%), Positives = 413/619 (66%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLV+EI+DN++DEA AGYA I++ + +D S++V DNGRGIP+D+
Sbjct: 51 MYIGSTGAPGLHHLVWEIVDNSIDEALAGYADKIDIKIESDGSITVIDNGRGIPVDIQEK 110
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L V V+RDG Y Q
Sbjct: 111 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLRVEVYRDGKIYQQ 168
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG V+ L V D+ GT + F D ++FT +D T+ R+RELAFLN
Sbjct: 169 EYSRGHIVSDLKV----VGESDKTGTVVNFVADPEIFTDTTDYDFQTLNKRVRELAFLNK 224
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I L ED E +Q Y + GG++EYVQ+LN +K+ L + V +D I +++A
Sbjct: 225 GLHITL--EDRREEDSQEVAYQYEGGIKEYVQYLNENKEILFEEPVYLEGQMDDIEVEVA 282
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ + Y + +AN+I T +GGTH G+K +LTRT+N + +K+KD +LSGE
Sbjct: 283 FQYTA-GYHSNFMSFANNIHTFEGGTHESGIKTALTRTINDYARSQNLLKEKDDNLSGED 341
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S+R PNP+FEGQTK +LGN EVR + D+ ++L ++L P++ I+ K
Sbjct: 342 VREGLTLIVSIRHPNPQFEGQTKMKLGNSEVRTITDRLFGQHLEQFLYETPNIARQIVDK 401
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA AAKRAR++ R+KS L S+LPGKLADCSS PEE E+FIVEG+SAGGSAK
Sbjct: 402 GILASKARQAAKRAREMTRKKSGLEISNLPGKLADCSSRVPEECELFIVEGNSAGGSAKL 461
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 462 GRDRHFQAILPIRGKILNVEKASMDRILANEEIRSLFTAMGTGW-GNDFDVTKARYHKLV 520
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT YRY + L D G IY+ VPPLY+V +GK V Y D EL
Sbjct: 521 IMTDADVDGAHIRTLLLTLIYRYMRPLLDAGYIYIAVPPLYQVRQGKNVHYVNSDQELND 580
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++QR+KGLGEM QLWETT++P QR + Q+ ++DA EA+ S LMG
Sbjct: 581 YMKTLAERPRPAVQRYKGLGEMDAEQLWETTMDPTQRQMLQVTVDDAQEADRNISMLMGD 640
Query: 600 RVDTRKELIQNAANLVNLD 618
V R++ I+N A +D
Sbjct: 641 LVAPRRDFIENNATYATID 659
>gi|429736495|ref|ZP_19270391.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
gi|429154931|gb|EKX97638.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
Length = 685
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/620 (51%), Positives = 425/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +EV + DNS++V DNGRGIP+D+H
Sbjct: 78 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVEVVIHKDNSITVTDNGRGIPVDMH-E 136
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS +++V V RDG +
Sbjct: 137 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSTMDVEVRRDGEIHAI 194
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 195 SFARG--VTQKKLHT--IGTCETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNH 249
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L D E+ + + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 250 GITITLV--DERGEEERRETFHFDGGIRSFVAHLNRKKETINEEPIYFNGVKDDTVVEIA 307
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE
Sbjct: 308 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGED 366
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS++V P+FEGQTKT+LGN EVR +VD V E L EY E +P V +L K
Sbjct: 367 VREGLTCVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLMEYFEENPAVTKRVLDK 426
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 427 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 486
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 487 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKII 545
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 546 IMTDADVDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKEKKHFYTYSDEEQAK 605
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG
Sbjct: 606 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGD 664
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 665 KVEPRRQFIEENARLVRNLD 684
>gi|410453633|ref|ZP_11307580.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
gi|409932961|gb|EKN69911.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
Length = 640
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 432/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+ I V + DNS++V DNGRGIP+D+
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGHCDEINVIIEEDNSITVKDNGRGIPVDIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVYVHRDGKIHYI 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG V L + + D GT F PD ++FT ++++++ +A RIRELAFLN
Sbjct: 149 KFERGAVVKELAV----IGTTDHTGTITHFKPDSEIFTETLEYEYDILATRIRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I + ED E N+ NEY + GG++ YV+ LN K+ +HD + + DGI++++A
Sbjct: 205 GLKITI--EDKRVE-NKRNEYHYEGGIKSYVEHLNRTKEVIHDEPIYMEGEKDGISVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y+D + +AN+I T +GGTH G K +LTR +N +K+ +K+ D +LSGE
Sbjct: 262 LQY-NEGYTDNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNGLIKENDTNLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T I+S++ P+P+FEGQTKT+LGN EVR + D +++ +P V I+ K
Sbjct: 321 VREGITAIVSIKHPDPQFEGQTKTKLGNSEVRAITDTVFASTFDKFMLENPTVAKKIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAK+AR+L R+KS L SSLPGKLADCSS P ESE+FIVEGDSAGGSAKQ
Sbjct: 381 GLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSKDPAESEMFIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDRILSNLEVRAMITAIGTGI-GEDFDIAKARYHKVV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYKV++GK+++Y Y+D EL++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRFMRKLIEAGYVYIAQPPLYKVQQGKRIEYAYNDKELER 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P+ +IQR+KGLGEM P QLW+TT+NPE R + Q+ +EDA EA+ F LMG
Sbjct: 560 IFAELPATPKPNIQRYKGLGEMNPEQLWDTTMNPEGRSMLQVSLEDAIEADETFDMLMGE 619
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 620 KVEPRRNFIEENAQYVKNLD 639
>gi|326202777|ref|ZP_08192644.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
gi|325986854|gb|EGD47683.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
Length = 642
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/628 (50%), Positives = 433/628 (68%), Gaps = 21/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + DNS++V DNG GIP+ +HP
Sbjct: 30 MYIGSTSSRGLHHLVYEIVANSVDEALAGRCDTIQVIVHKDNSITVTDNGSGIPVGIHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE V T+LHAGGKFG S YSVSGGLHGVG SVVNALSES+EV V R+G Y Q
Sbjct: 90 MGIPTLEVVHTILHAGGKFG--SGAYSVSGGLHGVGASVVNALSESMEVEVKREGHIYRQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRGKP+T++ + + GT F PD +F I FD + + R RE+AFLN
Sbjct: 148 KYSRGKPITSVEI----IGETEDSGTITTFKPDPDIFED-IVFDFDVMITRYREMAFLNR 202
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L ++ D EKN + E GG+ +V++LN K+PLHD V+ F D ++
Sbjct: 203 GIKIQLIDQRPDEIIEKNLHYE----GGIISFVEYLNKTKEPLHDKVIYFEGIRDANIVE 258
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +D Y++T+ YAN+I T +GGTH+ G ++++T+ LN +K +++ D +LSG
Sbjct: 259 VAMQY-NDNYNETVFSYANNIATTEGGTHLTGFRSAITKVLNDYARKFNIIRENDKNLSG 317
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT +ISV++P P+FEGQTKT+LGN E+R +V+ V + L +LE +P + IL
Sbjct: 318 EDVREGLTAVISVKLPEPQFEGQTKTKLGNSEIRTLVENVVSDKLNIFLEENPAIAKIIL 377
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
KSL+A +A AA++AR+L R+KS + SS+LPGKLADCS P ++EIFIVEGDSAGGSA
Sbjct: 378 DKSLTAARARDAARKARELTRRKSAMDSSTLPGKLADCSEKDPTKTEIFIVEGDSAGGSA 437
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR+ QAILPL GK+LNVE+ ++ NE++ +I ALG G+ G++F LRY K
Sbjct: 438 KQGRDRKIQAILPLWGKMLNVEKSRLDKVFDNEKLAPVIIALGAGI-GDEFDTSKLRYDK 496
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
III+ DADVDG+HIR LLLTFF+RY + L ++G +Y+ +PPL+KV +GK Y YDD ++
Sbjct: 497 IIIMADADVDGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPLFKVYKGKDEYYAYDDRQV 556
Query: 538 KKV---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
K+ + + +IQRFKGLGEM P QLWETT+NPE R + ++ ++DA A+ VFS
Sbjct: 557 SKIFEDRGWRKDDPNVNIQRFKGLGEMNPDQLWETTMNPETRTIMKVDVQDAITADEVFS 616
Query: 595 SLMGARVDTRKELIQNAANLVNLDHLDI 622
MG +V+ RKE I A ++ +LDI
Sbjct: 617 MFMGEKVEPRKEYIHLHAK--DVTYLDI 642
>gi|160883910|ref|ZP_02064913.1| hypothetical protein BACOVA_01884 [Bacteroides ovatus ATCC 8483]
gi|336417360|ref|ZP_08597684.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|423290605|ref|ZP_17269454.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|423294128|ref|ZP_17272255.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
gi|156110640|gb|EDO12385.1| DNA gyrase, B subunit [Bacteroides ovatus ATCC 8483]
gi|335936106|gb|EGM98046.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|392665258|gb|EIY58786.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|392676624|gb|EIY70055.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
Length = 652
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 305/628 (48%), Positives = 423/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRDGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTADITGTRQQFWPDNTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I L E + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRITLTDRRVVNEDGSFKGEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|253681222|ref|ZP_04862020.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
gi|253562460|gb|EES91911.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
Length = 636
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/621 (51%), Positives = 445/621 (71%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEI+DN++DEA AG+ NI+V + DNSV+V D+GRG+P+ +HP
Sbjct: 27 MYIGSTGIRGLHHLVYEIVDNSIDEALAGFCQNIKVYIHKDNSVTVKDDGRGMPVGIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E ++TVLHAGGKFGG S LHGVG SVVNALS+ +V V R+G + Q
Sbjct: 87 MKRPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSKYCKVEVRREGHIWMQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GK + L + D +GT + F PD ++F +QFD++T+A R+RELAFLN
Sbjct: 145 EYKKGKVASELEI----IGDSDEKGTLVYFEPDDEIFE-EVQFDYDTLAHRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E + EK Q E+ + GG++ +V +LN +K+ LH D + + D +++A
Sbjct: 200 GIRITLIDE-REEEKKQ--EFHYEGGIKSFVSYLNRNKQTLHEDPIYVEGNKDDYLVEVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y+D + +AN+I TI+GGTH+ G K++LTR LN ++ +K+ D +LSG+
Sbjct: 257 LQY-NDTYNDNIFAFANNIDTIEGGTHLAGFKSALTRALNDYARRYGYLKEADKNLSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E ++E+LE +P+ +++ K
Sbjct: 316 TREGLTAVISVKLTDPQFEGQTKTKLGNTEVRGIVDSIVFERVSEFLEENPNTAKTVIEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL+A +A AAK+AR+L R+KSVL S++LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 376 SLTAARAREAAKKARELTRRKSVLESTALPGKLADCSSKDPSECEIYIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE++ + +E+I+ +I A G G+ G+DF E +RYH+II
Sbjct: 436 GRDRRFQAILPLRGKIMNVEKQRLDKILNSEQIRAMITAFGAGI-GKDFDIEKIRYHRII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTFFYRY + L + G +Y+ PPLY+V++GK ++Y Y D EL++
Sbjct: 495 IMTDADVDGAHIATLLLTFFYRYMRELVEGGHVYIAQPPLYQVKKGKIIRYSYSDNELQQ 554
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + + IQR+KGLGEM QLW+TT+NPE R L ++ I+DA A+ +F+ LMG
Sbjct: 555 VLTEIGGKDKNTEIQRYKGLGEMDATQLWDTTMNPEHRTLVKVTIDDAMRADEIFTILMG 614
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+E I +NA +VNLD
Sbjct: 615 DKVEPRREFIEENAKRVVNLD 635
>gi|260890953|ref|ZP_05902216.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
gi|260859506|gb|EEX74006.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
Length = 660
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/644 (48%), Positives = 426/644 (66%), Gaps = 35/644 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN+VDEA AG I V +L N + V+DNGRGIP+ +H
Sbjct: 25 MYIGSTSARGLHHLVWEIVDNSVDEALAGICDKITVKILEGNIIEVSDNGRGIPVGMHK- 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LE TV RDG + Q
Sbjct: 84 TGKSTLEVVLTVLHAGGKF--DNDNYKVSGGLHGVGVSVVNALSEWLEATVTRDGKIFRQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T + V GT +RF D ++F T + +D++ + R++ELA+LN
Sbjct: 142 TYERGVP--TSPVEEIGVADDGTHGTVVRFKADDEIFETTV-YDYSVLESRLKELAYLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR--------KDVD 232
L I L E + E + E+ F GG+++++ + ++K + DV+ K+V+
Sbjct: 199 GLKIELADE-RNAENVKAEEFLFEGGIKDFLNEIIDEEKIIDDVIYMADTMQIEEAKEVE 257
Query: 233 G----------------ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR 276
+ +++A+ + + + +T+ + N+I T +GGTH+ G + +LTR
Sbjct: 258 AEDENGNTVIKQRGAKFVEVEIAMNYTT-SQRETVYSFVNNINTHEGGTHVSGFRTALTR 316
Query: 277 TLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 336
T+N + K+ +KDK+ + G VREGL C+ISV++P P+FEGQTKT+LGN EV +V
Sbjct: 317 TINDIAKQMNLIKDKNGTFQGTDVREGLVCVISVKIPEPQFEGQTKTKLGNSEVTGIVSN 376
Query: 337 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 396
V L YLE HP + I+ K + +A AAK+AR+LV +K+ L SLPGKLADCS
Sbjct: 377 IVGSNLKFYLEDHPKAAEKIIEKMAMSKRAREAAKKARELVLRKNTLEVGSLPGKLADCS 436
Query: 397 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 456
S P ESEIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILNVE+ +N EI+ +I
Sbjct: 437 SKDPAESEIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEKSGVHKALENAEIRAMI 496
Query: 457 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 516
A G G GE+ + LRYHKI+I+TDADVDGAHIRTL+LTFFYR+ + L +EG IY+
Sbjct: 497 TAFGAGF-GEEMDLKKLRYHKIVIMTDADVDGAHIRTLMLTFFYRHLRELINEGYIYIAQ 555
Query: 517 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQ 575
PPLYK++ GK ++Y Y D ++K+V Y+IQR+KGLGEM P QLWETTL+PE
Sbjct: 556 PPLYKIQAGKAIRYAYSDDQMKQVTRVLEGEGRKYTIQRYKGLGEMNPEQLWETTLDPEV 615
Query: 576 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 618
R L ++ +EDA+ A+ +F+ LMG +V+ R++ I++ AN V NLD
Sbjct: 616 RTLLKVSMEDASYADKMFNILMGDKVEPRRKFIEDNANYVRNLD 659
>gi|169823702|ref|YP_001691313.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
gi|167830507|dbj|BAG07423.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
Length = 638
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/625 (51%), Positives = 437/625 (69%), Gaps = 21/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG I+V + DNS+ V D+G GIP++ HP
Sbjct: 27 MYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVTIKKDNSIIVEDDGSGIPVETHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q
Sbjct: 87 TGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ +GK VT LT V R GT I F PD +F T + FD N +A R RE+AFLN
Sbjct: 145 RFEKGKTVTGLTV----VKENVRGTGTTIEFMPDDTIFET-LNFDKNVLAKRFREMAFLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I E SD E++ Y E F + GG++ +V+++N KKPL H+V+ + D ++
Sbjct: 200 KGVKI----EFSD-ERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG
Sbjct: 255 IAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+
Sbjct: 314 DDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTII 373
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSA
Sbjct: 374 QKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K GRD +FQAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY K
Sbjct: 434 KGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGK 492
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAE 536
I+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + E
Sbjct: 493 IVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFS 594
L++ + + +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F
Sbjct: 553 LEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFD 612
Query: 595 SLMGARVDTRKELI-QNAANLVNLD 618
LMG V+ R+E I QNA N+D
Sbjct: 613 VLMGDNVEPRREFIEQNAVYAQNID 637
>gi|348025743|ref|YP_004765548.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
gi|341821797|emb|CCC72721.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
Length = 639
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/624 (50%), Positives = 438/624 (70%), Gaps = 19/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY ++IEV + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTSTRGLHHLVYEVVDNSIDEALAGYCTHIEVTIQEDNSITVVDNGRGIPVAMH-K 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVVNALS +V V RDG +
Sbjct: 87 IGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSVWTKVQVKRDGYLWGI 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG L + P+++ + GT++ F PD ++F + +D NT+ R+RELAFLN
Sbjct: 145 SFTRGVTDEPLR-KIRPLEAGEETGTKVSFKPDHEIFPDTV-YDFNTLKTRLRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG----ITI 236
L I L + + + Y + GGL +V++LN + ++ + +VDG + +
Sbjct: 203 GLHITLTDKRGE---GKSEVYCYEGGLTSFVEFLNQSHQAVNPTI---INVDGEKNKVIV 256
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
D+A+Q+ +D YS+ +L + N I T +GGTH+ G ++ LTRT+N G+ + +K+ + +LS
Sbjct: 257 DIAMQY-NDGYSENILTFVNDIFTEEGGTHLSGFRSGLTRTINDYGRSAGIIKENEDNLS 315
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT +ISV+V P+FEGQTKT+LGN EV+ +VD + + L E+ E HP +I
Sbjct: 316 GEDVREGLTAVISVKVREPQFEGQTKTKLGNSEVKGIVDNIISDGLKEFFEEHPSEAKAI 375
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K++SA +A AA+RAR+L R+K+ L SSLPGKLADCS P+++EI++VEGDSAGGS
Sbjct: 376 ITKTISASRARQAARRARELTRRKNALEISSLPGKLADCSEKNPDQTEIYLVEGDSAGGS 435
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKI+NVE+ + N+EI+++I A G G+ G++F RY
Sbjct: 436 AKQGRDRRFQAILPLRGKIINVEKARLDKILANDEIRSMITAFGTGI-GQEFDLSKRRYD 494
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYR+ K L +G +Y+ PPLY+V +GKQV Y Y D
Sbjct: 495 KIIIMTDADVDGAHIRTLLLTFFYRFMKPLITDGHVYIAQPPLYQVRKGKQVWYFYTDES 554
Query: 537 LK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ K+ N +QR+KGLGEM P QLWETT++PE R + ++ +EDAAEA+ +FS
Sbjct: 555 MQAKLDELGRDNNSVVVQRYKGLGEMNPEQLWETTMDPENRTMLKVELEDAAEADRIFSV 614
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R++ I +NA + NLD
Sbjct: 615 LMGDKVEPRRKFIEENAKKVRNLD 638
>gi|290968148|ref|ZP_06559693.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|335049908|ref|ZP_08542891.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
gi|290781823|gb|EFD94406.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|333762037|gb|EGL39553.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
Length = 640
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/621 (51%), Positives = 433/621 (69%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AG+ ++IEV + ADNS++V+DNGRGIP+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEVVDNSVDEALAGFCTHIEVTIEADNSITVSDNGRGIPVAMH-K 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVVNALS EV V RD +
Sbjct: 88 VGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSIQTEVKVKRDNYLWDI 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG LT ++ + GT + F PD ++F + +D +T+ R+RELAFLN
Sbjct: 146 SFARGITEKKLT-KTRALEPGEETGTTVHFKPDPEIFPDVV-YDFDTLKTRLRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L + E N+ Y + GGL +VQ+LN +K+ +H V+ + + + +D+A
Sbjct: 204 GLHITLT---DNREHNKQEVYCYEGGLISFVQFLNENKQAVHPTVIPLDGEKNQVMVDIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YS+ +L + N I T +GGTH+ G +++LTRT+N G+ + +K+ + +LSGE
Sbjct: 261 MQY-NDGYSENILTFVNDIFTEEGGTHLSGFRSALTRTINDYGRSAGIIKENEDNLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV+V P+FEGQTKT+LGN EV+ +VD V + L E+ HP SI++K
Sbjct: 320 VREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGIVDTLVSDGLREFFGEHPVEAKSIVNK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A AA+RAR+L R+K+ L SSLPGKLADCS + E +EI++VEGDSAGGSAKQ
Sbjct: 380 TITASRARQAARRARELTRRKNALEISSLPGKLADCSEKSSERTEIYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKI+NVE+ + NEEI+ +I A G G+ GE+F RY KII
Sbjct: 440 GRDRKFQAILPLRGKIINVEKARLDKILANEEIRAMITAFGTGI-GEEFDITKRRYDKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK- 538
I+TDADVDGAHIRTLLLTFFYR+ K L EG +Y+ PPLY+V +GKQ+ Y Y D +
Sbjct: 499 IMTDADVDGAHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQVRKGKQMWYFYTDETMNA 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ +QR+KGLGEM P QLWETT++PE R + Q+ +EDA EA+ +FS LMG
Sbjct: 559 KLDELGRDTNNIVVQRYKGLGEMNPEQLWETTMDPEYRTMLQVHLEDAVEADRIFSVLMG 618
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R++ IQ NA + NLD
Sbjct: 619 DKVEPRRQFIQENAKKVRNLD 639
>gi|307352947|ref|YP_003893998.1| DNA gyrase subunit B [Methanoplanus petrolearius DSM 11571]
gi|307156180|gb|ADN35560.1| DNA gyrase, B subunit [Methanoplanus petrolearius DSM 11571]
Length = 640
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 329/626 (52%), Positives = 440/626 (70%), Gaps = 20/626 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNAVDEA AG +I V L D + +V DNGRGIP+D+
Sbjct: 26 MYIGSTDVRGLHHLVYEVVDNAVDEALAGVCDHIIVTLGRDGTCTVEDNGRGIPVDIMEE 85
Query: 61 TN-KSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
+ KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE L+V V+RDG Y
Sbjct: 86 QDGKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSEFLQVEVFRDGYIYD 143
Query: 120 QKYSRGKPVTTLTC--HVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
++RG + LT + P D+ ++ GT+I F PD +F T + FD++ ++ R+RELAF
Sbjct: 144 MGFARGGLKSDLTSRKNAAP-DAFEKHGTKISFKPDALIFET-VTFDYDILSHRMRELAF 201
Query: 178 LNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGF-RKDVDGI 234
LN +TI E SD E++ Y + F + GG+ E+V +L T K+ +H DV+ F KD +
Sbjct: 202 LNRGITI----EISD-ERSGYADIFNYEGGISEFVTYLITGKETVHPDVIYFDTKDAASM 256
Query: 235 T-IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
T +++ALQ+ S AYS+TM+ + NS+ T +GGTH+EG +++LTR +N K + +K
Sbjct: 257 TEVEVALQY-STAYSETMMTFVNSVNTREGGTHLEGFRSALTRAINKSAKDNNLMKGMSE 315
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
SL GE VREGL +IS++V NP+FEGQTK RLGN V+ +VD V + LTEY E +P V+
Sbjct: 316 SLKGEDVREGLVTVISLKVANPQFEGQTKMRLGNSNVKGIVDSLVYQSLTEYFEENPKVI 375
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
+I+SK++ A +A AA++AR+L R+KS L S LPGKLADCS P +SEI+IVEGDSA
Sbjct: 376 QAIVSKAVGAARAREAARKARELARRKSTLESGGLPGKLADCSERDPSKSEIYIVEGDSA 435
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 473
GGSAKQGR R+FQAILPLRGKILNVE+ + + KN EIQ LI A+G G GE F E
Sbjct: 436 GGSAKQGRSRQFQAILPLRGKILNVEKANPHRILKNAEIQTLISAIGCGF-GESFDVEKA 494
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH II +TDADVDGAHI TLLLTFFYRY L ++G IY+ PPL++V +GK +Y +
Sbjct: 495 RYHHIIFMTDADVDGAHICTLLLTFFYRYMPELIEKGYIYIAQPPLFRVAKGKNEKYAFS 554
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ E+K+ F + S+QR+KGLGEM QLW TT+ PE R+LKQ+ + +A+ A+ +F
Sbjct: 555 EEEMKRYVKEFGDKGV-SVQRYKGLGEMNADQLWHTTMAPESRVLKQVSVIEASYADEIF 613
Query: 594 SSLMGARVDTRKE-LIQNAANLVNLD 618
S LMG V+ RKE +I+++ + NLD
Sbjct: 614 SKLMGDDVEARKEFIIRHSKEVTNLD 639
>gi|347541857|ref|YP_004856493.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346984892|dbj|BAK80567.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 639
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/625 (50%), Positives = 431/625 (68%), Gaps = 22/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYEI+DN++DEA AG+ I + + DNS+ ++DNGRGIP+ HP
Sbjct: 29 MYIGSTSKKGLHHLVYEIVDNSIDEALAGFCDQISITINKDNSILISDNGRGIPVGEHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE ++TVLHAGGKF G +GY +SGGLHGVG SVVNALSE V V R G Y Q
Sbjct: 89 LKKSTLEVIMTVLHAGGKFNG--NGYKISGGLHGVGASVVNALSEKCYVKVKRGGDIYFQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRGKP+ V V GT F PDK++FT +++D + ++ R+RELAFLN
Sbjct: 147 EYSRGKPID----DVKKVGRTTENGTETFFIPDKEIFTETVEYDFDVLSQRLRELAFLNA 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I+L D +N +F+ GG++E+V+ +N K+ L DV+ F + + + +A
Sbjct: 203 GIRISLIDLRFDKSEN----FFYIGGVKEFVKHINKGKECLFDDVIYFEHSKNDLNLQIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV----KDKDISL 295
+Q+ +D+Y++ +L Y N+I T +GGTH+ G K SLTR +N KK + KD+ SL
Sbjct: 259 MQY-TDSYNENVLTYVNNIFTQEGGTHLIGFKTSLTRCVNDYAKKFNYIKEHNKDEIKSL 317
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
GE +REGL C++SV++PNP+FEGQTKT+LGN EVR +VD +E+L +P++
Sbjct: 318 IGEDIREGLVCVLSVKIPNPQFEGQTKTKLGNSEVRSIVDSIFFNCFSEFLNENPNIGKI 377
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
+ K++ A KA AAK+AR+ R KSVL +SLPGKLADCSS PEE EI+IVEGDSAGG
Sbjct: 378 VCEKAIIAAKAREAAKKARETTR-KSVLDRTSLPGKLADCSSKNPEECEIYIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR+FQAILPL GKI+NVE++ + +E I+ +I A G G+ G++F +RY
Sbjct: 437 SAKQGRDRKFQAILPLAGKIMNVEKQRIFKILSSETIRCMITAFGCGI-GQEFDVNKIRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
++II++TDADVDG+HIRTLLLTF YRY + ++G +Y+ PPLYKV K+ YCY +
Sbjct: 496 NRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLYKVTESKKEFYCYTEE 555
Query: 536 ELK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL K+K SN + IQR+KGLGEM P QLWETT+NPE R L ++ IE A+ A+ +FS
Sbjct: 556 ELNLKLKEINKSNLI--IQRYKGLGEMNPSQLWETTMNPETRTLLRVTIEHASYADEIFS 613
Query: 595 SLMGARVDTRKELIQNAA-NLVNLD 618
LMG +V+ R+E I+N A ++ NLD
Sbjct: 614 ILMGDKVEPRREFIRNNARDVKNLD 638
>gi|315640352|ref|ZP_07895468.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
gi|315483888|gb|EFU74368.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
Length = 649
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/624 (50%), Positives = 428/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A+ IEV + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFATKIEVVVEKDNSITVTDDGRGIPVDIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGK GY VSGGLHGVG SVVNALS +L+V V+++G Y Q
Sbjct: 95 TGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTTLDVKVFKEGKVYFQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V+ LT + DR GT + F PD ++F F+ +A R+RELAFLN
Sbjct: 153 EYHRGAVVSDLTI----IGETDRHGTEVHFVPDPEIFRETTTFEFEKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED E+ + + F GG++ YV+ LN K L + + + I+++++
Sbjct: 209 GLHISI--EDKRKEEAEVRAFHFEGGIKSYVEHLNATKTVLFPEPIYLEGNQQDISVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K +LTR +N +K K +++ D +LSGE
Sbjct: 267 MQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTALTRVINDYARKQKLMRESDENLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ ++L +P V I+ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFAKFLMENPTVGRQIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA LAAKRAR++ R+K L SSLPGKLADCSS ++ E+FIVEGDSAGGSAKQ
Sbjct: 386 GLLASKARLAAKRAREVTRRKGALEISSLPGKLADCSSREADKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRDREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKQAED 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
ELK++ SS P++ ++QR+KGLGEM QLWETT++PE RM+ Q+ ++DA EA+ VF
Sbjct: 565 ELKQIVSSLPASPKPNVQRYKGLGEMDDHQLWETTMDPENRMMLQVSVDDAIEADQVFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|78707345|gb|ABB46478.1| DNA gyrase subunit B [Acholeplasma equifetale]
gi|78707347|gb|ABB46479.1| DNA gyrase subunit B [Acholeplasma equifetale]
Length = 588
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/596 (51%), Positives = 407/596 (68%), Gaps = 16/596 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA AGYA +IE+ +L DN + V+DNGRGIP+D+HP
Sbjct: 7 MYIGSTGERGLHHLVWEIVDNSIDEALAGYADHIEIEVLKDNVIRVSDNGRGIPVDIHPK 66
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LS V + +DG Y Q
Sbjct: 67 TGRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSVWYVVEIHKDGKIYEQ 124
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + +R GT F D +FT +D T+ RI++LAFLN
Sbjct: 125 KYERGIPAYDLK----ELGETNRTGTITTFKADPLIFTETTVYDIETLRTRIQQLAFLNR 180
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+TI+L DS E + Y E F + GG+ EYV++LN +KK +H D++ F K+ DG+T+++
Sbjct: 181 GITISL--SDSRDENHIYQETFKYDGGIIEYVKFLNQNKKTIHPDIIYFEKEQDGVTVEV 238
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ D Y+ + + N+I T +GG H +G K +LTR ++ K KD ++ GE
Sbjct: 239 AMQYV-DTYTPNIHSFTNNISTTEGGMHEDGYKMALTRVISRYADDMKAKKDD--AIIGE 295
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q QE L +L +P SI+
Sbjct: 296 DTREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQVTQEALERFLLENPQQAKSIVE 355
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + A +A +A+++A++L R+KS L KLADC S PE+SE+FIVEGDSAGGSAK
Sbjct: 356 KVIEATRARVASRKAKELARRKSPLDQLDFASKLADCRSKDPEKSELFIVEGDSAGGSAK 415
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRD FQAILPLRGK+LNVE+ M KN+EI N+I+A+G G+ E+F LRYHKI
Sbjct: 416 QGRDSEFQAILPLRGKVLNVEKARIDTMLKNKEIINIIQAIGTGI-SEEFDISKLRYHKI 474
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFF+R+ + L + G IY PPLYKV G+ V+Y Y D EL
Sbjct: 475 VIMTDADVDGAHIRTLLLTFFFRHMRPLIENGHIYAAQPPLYKVSYGRNVKYAYSDEELN 534
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
++ S + ++QR+KGLGEM QLW+TT+NPE R L Q+ ++DA EA+ +F+
Sbjct: 535 EITSKLETKP--TLQRYKGLGEMNYEQLWDTTMNPETRTLLQIQLDDAIEADQIFT 588
>gi|427384558|ref|ZP_18881063.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
gi|425727819|gb|EKU90678.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
Length = 653
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/629 (48%), Positives = 428/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P V + + D GTR +FWPD +FT + +++ +A R+RELA+LN
Sbjct: 151 EYECGHP----QYPVKEIGTSDITGTRQQFWPDNTIFTETV-YNYEILASRMRELAYLNA 205
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L D E N E F++ GL+E+V+++++ ++ L +DV+ + G ++
Sbjct: 206 GIKITLTDLRVKDEEGNAKMEMFYSEEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G
Sbjct: 266 VAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP ++
Sbjct: 325 DDFREGLTAVISIKVQEPQFEGQTKTKLGNSEVMGAVDQAVGEALNYYLEEHPKEAKLVV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGRDRRFQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRDRRFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY K+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIRNGYLYIATPPLYLCKKGKVEEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLW TT+NP+ RMLKQ+ IE+AAE
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWSTTMNPDNRMLKQISIENAAEV 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS LMG V R+E I+ A N+D
Sbjct: 624 DYVFSMLMGEDVGPRREFIEKNATYANID 652
>gi|329767180|ref|ZP_08258707.1| DNA gyrase subunit B [Gemella haemolysans M341]
gi|328836847|gb|EGF86494.1| DNA gyrase subunit B [Gemella haemolysans M341]
Length = 638
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 309/619 (49%), Positives = 429/619 (69%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I VA+ N + V DNGRGIP+D+
Sbjct: 30 MYIGSTSSKGLHHLVWEIVDNSIDEALAGYCDTITVAIEKGNWIRVEDNGRGIPVDIQEQ 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALE +LTVLHAGGKFGG S LHGVG SVVNALS +LE +V RDG +
Sbjct: 90 TGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEASVHRDGKIHTM 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG V +T V + DR GT IRF D ++F +D++ + RIRELAFLN
Sbjct: 148 KFERGDVVQGITV----VGNTDRTGTTIRFKADPEIFQETTVYDYDILRTRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI L+ E EK + +++ GGL EYV+ LN +K LH+ + ++DG +++++
Sbjct: 204 GITIILKDEREGQEKEE--TFYYEGGLLEYVEMLNENKDALHEAIYVHGEMDGKEVEISM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ + YS +L YAN+I T +GGTH G K +LTR +NS GKK+K +KDK+ SL+G+ V
Sbjct: 262 QYNT-GYSSNVLSYANNINTHEGGTHESGFKTALTRIINSYGKKNKLIKDKE-SLTGDDV 319
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P + I+ K
Sbjct: 320 REGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKIAKIIVEKG 379
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK G
Sbjct: 380 LQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLG 439
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
R+ +FQAILPL+GKILNVE+ + N+E+++LI A+G+G+ GE + LRYHKI+I
Sbjct: 440 RNSKFQAILPLKGKILNVEKVRIDKVLANDEVRSLITAIGMGI-GETLNIDKLRYHKIVI 498
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDG+HIRTLLLTFF+RY + L DEG +Y+ PPLY ++ GK+ YC+ + ELK+
Sbjct: 499 MTDADVDGSHIRTLLLTFFFRYMRELIDEGYVYIARPPLYGLKVGKKEFYCHTEEELKQN 558
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ Y++QR+KGLGEM +LW+TT++PE R++ Q+ I+DA A+ F +LMG +
Sbjct: 559 IEEHAGDKKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYQVSIDDAQRADAAFDTLMGEK 618
Query: 601 VDTRKELIQ-NAANLVNLD 618
V+ R++ I+ NA N++NLD
Sbjct: 619 VEPRRKFIEDNALNVINLD 637
>gi|389844097|ref|YP_006346177.1| DNA gyrase subunit B [Mesotoga prima MesG1.Ag.4.2]
gi|387858843|gb|AFK06934.1| DNA gyrase, B subunit [Mesotoga prima MesG1.Ag.4.2]
Length = 631
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 408/620 (65%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYEI+DN++DEA G+ I + + D SV V+DNGRGIPID+HP
Sbjct: 25 MYIGSTGKSGLHHLVYEIVDNSIDEAMGGFCDRINIVITEDGSVIVSDNGRGIPIDIHPD 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALE V+T LHAGGKF S Y +SGGLHGVG SVVNALSE + V V DG Y Q
Sbjct: 85 TGTSALEVVMTTLHAGGKF--SKDSYKISGGLHGVGASVVNALSEWMIVEVMVDGKIYRQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGK + + V + GT F PD VFT FD + + R +ELA+LN
Sbjct: 143 KYERGKALAPVEV----VGETNETGTVTSFKPDPLVFTVT-DFDFDILEARFKELAYLNG 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I D + Y F GG+ E+V+ L +KK +H D + + + I LA
Sbjct: 198 GIKITFE----DRRIGEKRSYHFEGGIVEFVKALTKNKKSIHKDPIYLEGTYNDVKIQLA 253
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S +Y + +L + N+I+TI+GGTH+ G K LT+T+N +G+K +KDKD +L GE
Sbjct: 254 MQYTS-SYDEDILTFVNNIKTIEGGTHLTGFKTVLTKTMNDVGRKHNVLKDKDPNLQGED 312
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGL+ I+SV V P+FEGQTK +LGN E + V + V+E L EY + + L +ILSK
Sbjct: 313 LREGLSAILSVFVKEPQFEGQTKAKLGNDEAFEAVMKVVKEKLEEYFDYNQKDLKAILSK 372
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A LAAK+AR++VR+K+ L +++LPGKLADC S +E+EIFIVEGDSAGGSAK
Sbjct: 373 ALEASRARLAAKKAREMVRRKNALENTTLPGKLADCISENLDETEIFIVEGDSAGGSAKM 432
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R R QAILPLRGKILNVE+ M K+E I N+I ALG G+ GEDF+ + LRY KII
Sbjct: 433 ARSRETQAILPLRGKILNVEKAGLDRMLKSETISNIIVALGTGM-GEDFEIKNLRYGKII 491
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLT FYRY L G +YV PLYK+E +Q Y Y D EL
Sbjct: 492 IMTDADVDGAHITTLLLTLFYRYMTPLITNGKVYVAQAPLYKIELNRQKHYFYSDEELTT 551
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
L + RFKGLGEM P QLWETT+NP R L ++ IEDA EA+ VF+ LMG+
Sbjct: 552 FLKEHSDRKL-NYSRFKGLGEMNPEQLWETTMNPNDRKLVKITIEDAEEADRVFTILMGS 610
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ IQ +A ++ NLD
Sbjct: 611 EVEERRSFIQRHALSISNLD 630
>gi|313147892|ref|ZP_07810085.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423281169|ref|ZP_17260080.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
gi|424665894|ref|ZP_18102930.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|313136659|gb|EFR54019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574147|gb|EKA78898.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|404583333|gb|EKA88014.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
Length = 652
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 304/628 (48%), Positives = 425/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V V + D GT+ +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYA----VKEVGTADHTGTKQQFWPDDSIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L R+ ++ ++ ++ GL E+V+++ + ++ L +DV+ + I I+
Sbjct: 206 GLRISLTDRRVINEDGSFKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I +SG
Sbjct: 266 VAIMYNT-GFSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKIEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLNYYLEEHPKEAKAIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A L
Sbjct: 445 KQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|433443705|ref|ZP_20408961.1| DNA gyrase, B subunit [Anoxybacillus flavithermus TNO-09.006]
gi|432001978|gb|ELK22841.1| DNA gyrase, B subunit [Anoxybacillus flavithermus TNO-09.006]
Length = 637
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/621 (51%), Positives = 432/621 (69%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP+GLHHLV+EI+DN++DEA AG+ + I V + DNS++V DNGRGIP+ +H
Sbjct: 28 MYIGSTGPKGLHHLVWEIVDNSIDEALAGFCTEINVIVEEDNSITVIDNGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG ++Q
Sbjct: 88 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEELEVYVHRDGNIHYQ 145
Query: 121 KYSRGKPVTTLTCHVLPV-DSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
K P+ + C L V DR GT I F PD ++FT ++D++T+A R+RELAFLN
Sbjct: 146 K-----PIPCVPCSDLQVVGETDRTGTMIHFKPDPEIFTETTEYDYDTLAHRLRELAFLN 200
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L ED EK + NEY++ GG+ YV+ LN K+ LH+ + + DGI +++
Sbjct: 201 KGIRITL--EDRRGEKRR-NEYYYEGGISSYVKHLNRTKETLHEEPIYIEGEKDGIQVEI 257
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D Y+ + +AN+I T +GGTH G K +LTR +N G+K+ K++D +L+GE
Sbjct: 258 ALQY-NDGYTSNIYSFANNIHTHEGGTHELGFKTALTRIINDYGRKNNMFKEQDANLTGE 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P P+FEGQTKT+LGN + R + E ++L +P V I+
Sbjct: 317 DVREGLTAIISVKHPAPQFEGQTKTKLGNSDARTATESIFAEQFEKFLLENPSVAKKIVE 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + A +A LAAKRAR+L R+K+ L SSLPGKLADCSS P E+++VEGDSAGGSAK
Sbjct: 377 KGILASRARLAAKRARELTRRKNALEVSSLPGKLADCSSRDPAICELYVVEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKI
Sbjct: 437 QGRDRHFQAILPLRGKIINVEKSRLDKILSNNEVRAIITALGTGI-GEDFDITKARYHKI 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYK+++GK+++Y Y D +L+
Sbjct: 496 IIMTDADVDGAHIRTLLLTFFYRYMREVIEQGYVYIAQPPLYKIQQGKRIEYAYSDRQLE 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + P IQR+KGLGEM P QLWETT+NPE R L ++ ++DA EA+ F LMG
Sbjct: 556 EILTRLPEQPKPVIQRYKGLGEMNPEQLWETTMNPETRTLLKVSLQDAMEADETFEILMG 615
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R++ I +NA + NLD
Sbjct: 616 DKVEPRRQFIEENAKYVKNLD 636
>gi|303234457|ref|ZP_07321095.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
gi|302494412|gb|EFL54180.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
Length = 638
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/625 (50%), Positives = 434/625 (69%), Gaps = 21/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG I+V + DNS+ V D+G GIP++ HP
Sbjct: 27 MYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVTIKKDNSIIVEDDGSGIPVETHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q
Sbjct: 87 TGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ +GK VT LT V R GT I F PD +F T + FD N +A R RE+AFLN
Sbjct: 145 RFEKGKTVTGLTV----VKENVRGTGTTIEFMPDDTIFET-LNFDRNVLAKRFREMAFLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I E++ Y E F + GG++ +V+++N KKPL H+V+ + D ++
Sbjct: 200 KGVKIEFA-----DERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG
Sbjct: 255 IAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+
Sbjct: 314 DDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTII 373
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSA
Sbjct: 374 QKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K GRD +FQAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY K
Sbjct: 434 KGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGK 492
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAE 536
I+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + E
Sbjct: 493 IVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFS 594
L++ + + +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F
Sbjct: 553 LEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRVLIKVEIDGEDENELDNTFD 612
Query: 595 SLMGARVDTRKELI-QNAANLVNLD 618
LMG V+ R+E I QNA N+D
Sbjct: 613 VLMGDNVEPRREFIEQNAVYAQNID 637
>gi|452207169|ref|YP_007487291.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
gi|452083269|emb|CCQ36556.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
Length = 639
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 312/613 (50%), Positives = 423/613 (69%), Gaps = 9/613 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEV + D SVSV D+GRGIP+D H
Sbjct: 27 MYIGSTDGRGLHHLVYEVVDNSIDEALAGHCDAIEVRINEDGSVSVVDDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV + RDG +
Sbjct: 87 YDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSKWLEVEIKRDGAVWRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P + V ++ + GT IRFWPD +F T F+++T+ R+RELAFLNP
Sbjct: 145 RFDHGEPEADIE-RVREMNPGEGTGTEIRFWPDGDIFETT-AFEYSTLESRLRELAFLNP 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ IALR E SD N EY GG+ E+V +LN ++ LH D+V D D I +++A
Sbjct: 203 GVEIALRDERSDEGTNSVFEY--EGGIREFVAYLNETRELLHEDIVYVEDDADDIHVEIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q + ++ +AN+I T +GGTH+ G K +LTR +N + + D D +L GE
Sbjct: 261 MQ-ATAGVQGSIHAFANNINTREGGTHLTGFKTALTRIINDYAGSNGLLSDLDGTLKGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+ P+P+FEGQTKT+LGN +VR +V+ +V E L YLE HPD ++I+SK
Sbjct: 320 IREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVEGAVHEKLATYLEEHPDTAEAIVSK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AAK+A +L R+KS L S+SLPGKLADC +PE++E+F+ EGDSAGGSAKQ
Sbjct: 380 AVEAAKARKAAKKAEELTRRKSALESTSLPGKLADCRERSPEDAELFVTEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+ FQAILP+RGKILNVE+ + +N EI+NLI A+G G+ GE+F EA RYHK+I
Sbjct: 440 GRNPEFQAILPIRGKILNVEKHRLDRILENNEIRNLITAIGTGI-GEEFDIEAARYHKVI 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+L DADVDGAHIRTLLLTF YR+ L + G +Y PPLY++ + +AE ++
Sbjct: 499 LLCDADVDGAHIRTLLLTFLYRHMTPLIEAGYVYAAQPPLYRIRYNGETYDAMTEAEREE 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V + +QRFKGLGEM P QLWETT++P+ R+LK++ +EDAA A+ +FS LMG
Sbjct: 559 VVADVCGGDPDQVQRFKGLGEMNPEQLWETTMDPDNRILKRITVEDAAAADRMFSVLMGD 618
Query: 600 RVDTRKELIQNAA 612
V RK+ I++ A
Sbjct: 619 AVGPRKQFIKDHA 631
>gi|284047394|ref|YP_003397733.1| DNA gyrase subunit B [Acidaminococcus fermentans DSM 20731]
gi|283951615|gb|ADB46418.1| DNA gyrase, B subunit [Acidaminococcus fermentans DSM 20731]
Length = 646
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/624 (50%), Positives = 431/624 (69%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AGY +I V + DNS++V DNGRGIP+++H
Sbjct: 38 MYIGSISGRGLHHLVYEVIDNSIDEALAGYCDHIRVIIHPDNSITVTDNGRGIPVEMH-K 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E V+TVLHAGGKFG GY VSGGLHGVG+S VNALS+ + V V ++G Y
Sbjct: 97 VGKPAIEVVMTVLHAGGKFG--DGGYKVSGGLHGVGVSCVNALSKKMVVEVKKNGKIYGI 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+GK TT +V ++ GT + FWPD +FT + + ++T+ RIRELAFLN
Sbjct: 155 EFSKGK--TTRPLYVKGECPENETGTSVTFWPDDTIFTETV-YSYDTLKHRIRELAFLNK 211
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L +D Q + + GG+ +V+++N K+PLH V G R+D +
Sbjct: 212 GVKIQL----TDERSGQDEVFHYEGGIVSFVEFVNKGKEPLHAKPIYVEGERQDT---IV 264
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ +DAY++ + + N+I T +GGTH+ G+K +LTR +N +K+ +KD + +LS
Sbjct: 265 EVAMQY-TDAYTENIYTFVNNINTEEGGTHLAGLKQALTRCINDYARKNSLLKDNEDNLS 323
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLTC++S++V P+FEGQTKT+LGN EVR +VD V E LTEY E + V I
Sbjct: 324 GDDVREGLTCVMSLKVREPQFEGQTKTKLGNSEVRGIVDNMVTEALTEYFEENAPVAKKI 383
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A +A AA++ARDL R+KS L SSLPGKLADCSS E+EI++VEGDSAGGS
Sbjct: 384 VEKAIMASRARSAARKARDLTRRKSALEVSSLPGKLADCSSKNAAETEIYLVEGDSAGGS 443
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ M ++EI+ +I A G G+ G++F RY
Sbjct: 444 AKQGRDRNFQAILPLRGKILNVEKARLDKMLNSQEIRAMITAFGCGI-GDEFDIAKARYG 502
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY K L G +++ PPLY + GK+ Y Y D E
Sbjct: 503 KIIIMTDADVDGAHIRTLLLTFFYRYMKPLIQNGNVFIAQPPLYLIRTGKKHTYAYSDEE 562
Query: 537 L-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L +K+ N Y +QR+KGLGEM P QLWETT++P +R + Q+ +EDAA A+ VFS
Sbjct: 563 LQRKLDEVGRQNNPY-VQRYKGLGEMNPEQLWETTMDPSKRTVLQVQLEDAATADSVFSV 621
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R++ I +NA + NLD
Sbjct: 622 LMGDKVEPRRQFIEENAGKVTNLD 645
>gi|254166743|ref|ZP_04873597.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|197624353|gb|EDY36914.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 648
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/637 (51%), Positives = 434/637 (68%), Gaps = 36/637 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHL+YE++DN++DEA AGY S I V + D SVSV D+GRGIP+D+HP
Sbjct: 28 MYIGSTDERGLHHLIYEVVDNSIDEALAGYCSRINVIIHKDGSVSVEDDGRGIPVDMHPE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAG KF Y ++GGLHGVG+ VVN LSE L+ + RDG Y Q
Sbjct: 88 KGKSALEVVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKAYIKRDGKIYFQ 145
Query: 121 KYSRGKPVTTLTCHVLPV------------DSKDRQ-----GTRIRFWPDKQVFTTAIQF 163
Y RGKP C V V D D + GT IRF PD ++F T +F
Sbjct: 146 WYERGKP----QCDVHVVGKIENGNFVWIEDGHDEKFKYSRGTYIRFKPDAEIFETT-EF 200
Query: 164 DHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH- 222
++ + ++R+LAFLN + I L E S ++ + + GG+ E+V++LN P+H
Sbjct: 201 KYSIVKKKLRDLAFLNRGIEITLEDERSGKKE----VFKYDGGIVEFVKFLNEGYNPIHR 256
Query: 223 DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLG 282
DVV + + DGI ++ A+Q+ +D+ S+ +L + N+I T++GGTH+ G +++LT+ +N
Sbjct: 257 DVVYGKDEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVEGGTHVSGFRSALTKVINDFA 315
Query: 283 KKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYL 342
K +K D SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V + L
Sbjct: 316 KSRNLLKGID-SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSIVNKIL 374
Query: 343 TEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 402
+ Y E HPDV +I+SK+++A +A +AA++AR+L R+K L S LPGKLADCS PE
Sbjct: 375 STYFEEHPDVATNIVSKAIAAARARIAARKARELARRKGYLESLDLPGKLADCSEEDPER 434
Query: 403 SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG 462
+E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G G
Sbjct: 435 AELFIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTG 494
Query: 463 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV 522
V+ EDF LRY KIII+TDADVDGAHIRTLLLTFFYRY L ++G IY+ PLY++
Sbjct: 495 VR-EDFDYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMPELIEKGHIYIAQAPLYRI 553
Query: 523 ERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLV 582
++GK + Y Y D E ++ NA S+QRFKGLGEM P QLW+TT+NPE R L ++
Sbjct: 554 QKGKNIYYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMNPQQLWDTTMNPETRRLIRVT 610
Query: 583 IEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 618
IEDAAEA+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 611 IEDAAEADRLFSILMGEQVGPRREFIIQHAKEVMNID 647
>gi|322370371|ref|ZP_08044930.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
gi|320550079|gb|EFW91734.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
Length = 638
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 320/614 (52%), Positives = 421/614 (68%), Gaps = 12/614 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I+V + DNSVS+AD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDSIDVTIHEDNSVSIADDGRGIPVDRHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE +V V RDG + Q
Sbjct: 87 YDMPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGISVVNALSEKFDVEVKRDGGVWKQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG P + V + + GT RFWPD ++F T F ++T+ R+RELAFLN
Sbjct: 145 TFERGDPAGEME-RVRDMRDDEETGTYQRFWPDTEIFETT-DFTYSTLENRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E D EK + + ++GG+ E+V++LN K LH +V+ F + D I +++A
Sbjct: 203 GVAITLADE-RDEEKG--DTFHYSGGIREFVEYLNETKTALHNEVIYFEDEDDNIQVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANDNDMLGDLDENLRGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V E L+ Y E HPD +I+SK
Sbjct: 319 IREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHEGLSVYFEEHPDTAQAIISK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AAK+A +L R+KS L SS+LPGKLADC S P +SE+F+VEGDSAGGSAKQ
Sbjct: 379 AVEAAKARKAAKKAEELTRRKSALESSALPGKLADCQSRDPTKSELFVVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
RDR FQAILPL GK+LNVE+ + +NE+I+N I A+G GV GE+F + RYHKII
Sbjct: 439 ARDREFQAILPLFGKVLNVEKHRLDRVLENEKIRNFITAIGTGV-GEEFDIDDARYHKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELK 538
I+TDADVDGAHIRTL LT YRY + L + G +Y PPLY+V RGK ++ +
Sbjct: 498 IMTDADVDGAHIRTLYLTLLYRYMRPLLEAGYVYAAQPPLYRVRYRGKTYDAMTEEERDE 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ N +QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LMG
Sbjct: 558 IIEEKCDGNP-SQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLMG 616
Query: 599 ARVDTRKELIQNAA 612
V RK+ IQ+ A
Sbjct: 617 DAVGPRKQFIQDHA 630
>gi|347751700|ref|YP_004859265.1| DNA gyrase subunit B [Bacillus coagulans 36D1]
gi|347584218|gb|AEP00485.1| DNA gyrase, B subunit [Bacillus coagulans 36D1]
Length = 641
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 426/621 (68%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ I V + DNS++V DNGRGIP+ +
Sbjct: 31 MYIGSTSARGLHHLVWEIVDNSIDEALAGFCDEINVFIEKDNSITVKDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++T+LHAGGKFGG S LHGVG SVVNALS L+V V RDG Y+Q
Sbjct: 91 VGRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELDVYVHRDGHIYYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP L + DR GT F PD ++FT +FD + + R+RELAFLN
Sbjct: 149 KYRRGKPAFDLKI----IGETDRTGTTTHFKPDPEIFTETTEFDFDILTTRLRELAFLNK 204
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I + K + +P K EY + GG++ YV+ LN K+ LH + + + DGIT+++
Sbjct: 205 GIKITIEDKREKNPRKQ---EYHYEGGIKSYVEHLNRSKEVLHKEPIYVEGEKDGITVEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+LQ+ +D ++ + +AN+I T +GGTH G K +LTR +N +K+ +K+ + +L+GE
Sbjct: 262 SLQY-NDGFASNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNNLIKENEANLTGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+S++ P+P+FEGQTKT+LGN E R + D E +++ +P V I+
Sbjct: 321 DVREGLTAIVSIKHPDPQFEGQTKTKLGNTEARTITDAVFSETFEKFMMENPQVARKIVE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K L A +A +AAK+AR+L R+KS L S+SLPGKLADC+S P ESE++IVEGDSAGGSAK
Sbjct: 381 KGLMAARARMAAKKARELTRRKSALESTSLPGKLADCTSRDPAESELYIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILPLRGKILNVE+ + N EI+ +I ALG GV GEDF RYHK+
Sbjct: 441 QGRDRMFQAILPLRGKILNVEKARLDKILSNAEIRTIITALGTGV-GEDFDISKARYHKV 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFFYRY + L D G IY+ PPLYKV++GK+V+Y Y D L+
Sbjct: 500 VIMTDADVDGAHIRTLLLTFFYRYMRPLIDAGYIYIAQPPLYKVQQGKRVEYVYSDRGLE 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ ++ P+ +IQR+KGLGEM P QLWETT+ P R + Q+ ++DA EA+ F LMG
Sbjct: 560 ELLNTLPAQPKPAIQRYKGLGEMNPEQLWETTMEPANRTMLQVSLDDAIEADGTFEMLMG 619
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+ I +NA + NLD
Sbjct: 620 DKVEPRRNFIEENAIYVKNLD 640
>gi|229083320|ref|ZP_04215682.1| DNA gyrase subunit B [Bacillus cereus Rock3-44]
gi|228699995|gb|EEL52618.1| DNA gyrase subunit B [Bacillus cereus Rock3-44]
Length = 640
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I VA+ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVAIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D GT RF PD ++F ++D +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E+ Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRENK-----QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEYGYIYIAQPPLFKVQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ S P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILSELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|302380141|ref|ZP_07268614.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
gi|302312083|gb|EFK94091.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
Length = 638
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/625 (50%), Positives = 434/625 (69%), Gaps = 21/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG I+V + DNS+ V D+G GIP++ HP
Sbjct: 27 MYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVTIKKDNSIIVEDDGSGIPVETHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q
Sbjct: 87 TGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ +GK VT LT V R GT I F PD +F T + FD N +A R RE+AFLN
Sbjct: 145 RFEKGKTVTGLTV----VKENVRGTGTTIEFMPDDTIFET-LNFDRNVLAKRFREMAFLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I E++ Y E F + GG++ +V+++N KKPL H+V+ + D ++
Sbjct: 200 KGVKIEFA-----DERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG
Sbjct: 255 IAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKSILKEKDDNLSG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+
Sbjct: 314 DDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTII 373
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSA
Sbjct: 374 QKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K GRD +FQAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY K
Sbjct: 434 KGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGK 492
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAE 536
I+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + E
Sbjct: 493 IVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFS 594
L++ + + +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F
Sbjct: 553 LEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFD 612
Query: 595 SLMGARVDTRKELI-QNAANLVNLD 618
LMG V+ R+E I QNA N+D
Sbjct: 613 VLMGDNVEPRREFIEQNAVYAQNID 637
>gi|298372284|ref|ZP_06982274.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
gi|298275188|gb|EFI16739.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
Length = 653
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/627 (48%), Positives = 422/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY NI V + DNSV+V D+GRGIP+D+H
Sbjct: 34 MYIGDVGEKGLHHLVYEVVDNSIDEALAGYCKNISVTINKDNSVTVKDDGRGIPVDIHEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS+ L+ V R+G Y Q
Sbjct: 94 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSDYLKAEVCRNGKRYVQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG P+ V V + GT I F PDK +F I + ++ + R+RELAFLN
Sbjct: 152 EYSRGVPLG----EVKEVGTSSETGTTITFHPDKDIFID-IHYKYSILVKRMRELAFLNA 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+LTI + + + N+ E++ GL E+V+++++ ++PL +DV+ D G ++
Sbjct: 207 GIRLTITDLRSEEEGGANKTEEFYSEQGLREFVKYIDSTREPLINDVIYIDTDKYGTPVE 266
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL +K ++ + +S
Sbjct: 267 VAMMYNT-SYTENLHSYVNNINTIEGGTHVTGFRTALTRTLKKYADDNKLLEKTKVEISS 325
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REG+T +ISV+V P+FEGQTKT+LGN EV+ +VD++V E L +LE HP +I+
Sbjct: 326 DDFREGITAVISVKVAEPQFEGQTKTKLGNDEVKGMVDRAVGEALNVFLEEHPKEAKTIV 385
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR+LV++KS L LPGKLADCSS EIF+VEGDSAGGSA
Sbjct: 386 EKIILAATARNAARKARELVQRKSPLSGGGLPGKLADCSSRDASLCEIFLVEGDSAGGSA 445
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKEAL 473
KQGRDR FQAILPLRGKILNVE+ +++EE++N+ ALG+ + E+ E L
Sbjct: 446 KQGRDRNFQAILPLRGKILNVEKAMRHKAFESEEVRNIYTALGVTIGTEEDSQALNIEKL 505
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+TDADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY ++GK +YC+
Sbjct: 506 RYHKVVIMTDADVDGSHIATLILTFFFRYMKELIEQGHVYIATPPLYLCKKGKVQEYCWT 565
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + + + I QR+KGLGEM P QLWETT+NPE R L+Q+ IE+AAEA+
Sbjct: 566 EEQRLRFIQQYGDGKESGITQQRYKGLGEMNPEQLWETTMNPENRTLRQITIENAAEADY 625
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
VFS LMG V R++ I+ A N+D
Sbjct: 626 VFSMLMGDDVAPRRQFIEENATYANID 652
>gi|82749782|ref|YP_415523.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
gi|82655313|emb|CAI79693.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
Length = 644
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 427/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G+DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGI-GDDFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSKLNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|300862234|ref|ZP_07108314.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|428765686|ref|YP_007151797.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
gi|300848759|gb|EFK76516.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|427183859|emb|CCO71083.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
Length = 649
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/624 (50%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A +I+V + D+S++V D+GRGIP+ +
Sbjct: 35 MYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS SL+V V++DG Y+Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTSLDVRVYKDGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +D + +A R+RELAFLN
Sbjct: 153 EYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED + EY + GG++ YV+ LN +K + + V + IT++++
Sbjct: 209 GLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNANKDVIFPEPVFIEGEQQDITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K SLTR +N +K K +K+ D L+GE
Sbjct: 267 MQY-TDGYHSNILSFANNIHTYEGGTHESGFKTSLTRVINDYARKQKLMKENDEKLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+ EY T++L +P V I+ K
Sbjct: 326 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEYFTKFLMENPTVGKQIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GMLASKARLAAKRAREVTRRKGALEISNLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC----YDDA 535
I+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y + +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKHAEE 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL KV P++ S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA EA+ +F
Sbjct: 565 ELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMDPEKRLMARVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|257871393|ref|ZP_05651046.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
gi|257805557|gb|EEV34379.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
Length = 649
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/624 (50%), Positives = 426/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFATAIQVIIEEDNSITVVDDGRGIPVDIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGKFGG S LHGVG SVVNALS +L+V V+++G Y+Q
Sbjct: 95 TGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTTLDVKVFKEGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L + DR GT + F PD ++FT F+ + +A R+RELAFLN
Sbjct: 153 EYHRGAVVEDLKV----IGETDRHGTTVHFVPDPEIFTETTVFNFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED E EY + GG++ YV+ LN K + + + + GIT++++
Sbjct: 209 GLKISI--EDKREEHPVLKEYHYDGGIKSYVEHLNASKTVIFPEPIYLEGEQQGITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + +L +AN+I T +GGTH G K +LTR +N +KSK +K+ D +L+GE
Sbjct: 267 LQY-TDSYHNNLLSFANNIHTYEGGTHESGFKTALTRVINDYARKSKLMKENDENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ T++L +P V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFTKFLMENPAVGRQVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA AAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GLLASKARQAAKRAREMTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNIHYIQPGKNAEQ 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+LK S P+ S+QR+KGLGEM QLWETT++PE RM+ ++ ++DA EA+ +F
Sbjct: 565 DLKNTIESLPATPKPSVQRYKGLGEMDDHQLWETTMDPENRMMLRVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|29348838|ref|NP_812341.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|298387912|ref|ZP_06997461.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
gi|383125011|ref|ZP_09945670.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|29340744|gb|AAO78535.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|251840836|gb|EES68917.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|298259319|gb|EFI02194.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
Length = 653
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/629 (48%), Positives = 429/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISIKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGVSDITGTRQQFWPDDTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
L I+L R+ ++ + + +E F++ GL E+V+++ + ++ L +DV+ + GI I
Sbjct: 206 GLRISLTDRRVVNEEDGSFKSEVFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPI 265
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +S
Sbjct: 266 EIAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEIS 324
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I
Sbjct: 325 GDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTI 384
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+
Sbjct: 385 VDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGT 444
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA---- 472
AKQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA
Sbjct: 445 AKQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCW 564
Query: 533 DDAELKKVKSSFP---SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++P+ RMLKQ+ I++AAEA
Sbjct: 565 TDAQRQKFIDTYGGGLENAVHT-QRYKGLGEMNAQQLWETTMDPDNRMLKQVNIDNAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRREFIEENATYANID 652
>gi|417925090|ref|ZP_12568517.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
gi|341592387|gb|EGS35273.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
Length = 638
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/625 (50%), Positives = 434/625 (69%), Gaps = 21/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG I+V + DNS+ V D+G GIP++ HP
Sbjct: 27 MYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVTIKKDNSIIVEDDGSGIPVETHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q
Sbjct: 87 TGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ +GK VT LT V R GT I F PD +F T + FD N +A R RE+AFLN
Sbjct: 145 RFEKGKTVTGLTV----VKENVRGTGTTIEFLPDDTIFET-LNFDRNVLAKRFREMAFLN 199
Query: 180 PKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I E++ Y E F + GG++ +V+++N KKPL H+V+ + D ++
Sbjct: 200 KGVKIEFA-----DERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVE 254
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG
Sbjct: 255 IAMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSG 313
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREG+T ++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+
Sbjct: 314 DDVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTII 373
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSA
Sbjct: 374 QKALASQKARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSA 433
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
K GRD +FQAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY K
Sbjct: 434 KGGRDNKFQAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGK 492
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAE 536
I+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + E
Sbjct: 493 IVIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFS 594
L++ + + +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F
Sbjct: 553 LEEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFD 612
Query: 595 SLMGARVDTRKELI-QNAANLVNLD 618
LMG V+ R+E I QNA N+D
Sbjct: 613 VLMGDNVEPRREFIEQNAVYAQNID 637
>gi|435852819|ref|YP_007314138.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433669230|gb|AGB40045.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 634
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 310/620 (50%), Positives = 438/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AGY +E+ + ++V DNGRGIP+ H
Sbjct: 27 MYIGSTEKKGLHHLVYEVIDNSIDEALAGYCDEVEIKIEPGEIITVRDNGRGIPVASHAK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E V+TVLHAGGKF G GY VSGGLHGVG+SVVNALSE LEV V R+G Y+Q
Sbjct: 87 LDRPAVEVVMTVLHAGGKFEGE--GYKVSGGLHGVGVSVVNALSEWLEVRVHRNGKIYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + + + GT IRF D+++F + ++++++T++ R +ELA+LN
Sbjct: 145 KYHRGVPDNDLEV----IGNTEETGTEIRFKADEEIFES-VRYNYDTLSQRFKELAYLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
++ I + E D ++ E+ + GG+ +V+ +N P+H DV+ F + +D +++A
Sbjct: 200 EVKIKILDEREDLIED---EFKYDGGIISFVEEINEHNTPIHEDVIFFEEQIDNTEVEVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y+D + +AN+I T +GGTH+ G K++LTRT+N +++ +KD D +LSG+
Sbjct: 257 IQYNTD-YADKIFTFANNINTHEGGTHLSGFKSALTRTINDYARQNDFLKDDDNNLSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ II+VR+ +P+FEGQTKT+LGN E+R +VD V + L+ L +P + I+ K
Sbjct: 316 IREGIVAIINVRLTDPQFEGQTKTKLGNSEIRGMVDSIVSKGLSTILSENPKLGKQIVKK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S++A +A AAK+AR+L ++K+ L S++LPGKLADCSS EESEI+IVEGDSAGGSAKQ
Sbjct: 376 SIAAAQARKAAKKARELTKRKNALVSTALPGKLADCSSRNAEESEIYIVEGDSAGGSAKQ 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ + N+EI++LI ALG G+ ++F LRY KII
Sbjct: 436 GRDREFQAILPLKGKILNVEKARLDRVLSNKEIKSLITALGTGI-ADEFDMNNLRYRKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ PPLYKV++G++ +Y Y D +L+
Sbjct: 495 IMTDADVDGAHIRTLLLTFFYRYMRPLLEEGLVYIAQPPLYKVKKGRREEYVYKDRQLQD 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ SIQR+KGLGEM P+QLW+TT++PE R L Q+ I D A+ VF+ LMG
Sbjct: 555 LLEEIGKKRT-SIQRYKGLGEMNPIQLWKTTMDPENRTLLQVQISDEVIADDVFTKLMGD 613
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V R+E IQ A V NLD
Sbjct: 614 KVKPRREFIQRHAKEVQNLD 633
>gi|289596495|ref|YP_003483191.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|289534282|gb|ADD08629.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 644
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 327/637 (51%), Positives = 434/637 (68%), Gaps = 36/637 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHL+YE++DN++DEA AGY S I V + D SVSV D+GRGIP+D+HP
Sbjct: 24 MYIGSTDERGLHHLIYEVVDNSIDEALAGYCSRINVIIHKDGSVSVEDDGRGIPVDMHPE 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAG KF Y ++GGLHGVG+ VVN LSE L+ + RDG Y Q
Sbjct: 84 KGKSALEVVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKAYIKRDGKIYFQ 141
Query: 121 KYSRGKPVTTLTCHVLPV------------DSKDRQ-----GTRIRFWPDKQVFTTAIQF 163
Y RGKP C V V D D + GT IRF PD ++F T +F
Sbjct: 142 WYERGKP----QCDVHVVGKIENGNFVWIEDGHDEKFKYSRGTYIRFKPDAEIFETT-EF 196
Query: 164 DHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH- 222
++ + ++R+LAFLN + I L E S ++ + + GG+ E+V++LN P+H
Sbjct: 197 KYSIVKKKLRDLAFLNRGIEITLEDERSGKKE----VFKYDGGIVEFVKFLNEGYNPIHR 252
Query: 223 DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLG 282
DVV + + DGI ++ A+Q+ +D+ S+ +L + N+I T++GGTH+ G +++LT+ +N
Sbjct: 253 DVVYGKDEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVEGGTHVSGFRSALTKVINDFA 311
Query: 283 KKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYL 342
K +K D SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V + L
Sbjct: 312 KSRNLLKGID-SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSIVNKIL 370
Query: 343 TEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 402
+ Y E HPDV +I+SK+++A +A +AA++AR+L R+K L S LPGKLADCS PE
Sbjct: 371 STYFEEHPDVATNIVSKAIAAARARIAARKARELARRKGYLESLDLPGKLADCSEEDPER 430
Query: 403 SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG 462
+E+FIVEGDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G G
Sbjct: 431 AELFIVEGDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTG 490
Query: 463 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV 522
V+ EDF LRY KIII+TDADVDGAHIRTLLLTFFYRY L ++G IY+ PLY++
Sbjct: 491 VR-EDFDYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMPELIEKGHIYIAQAPLYRI 549
Query: 523 ERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLV 582
++GK + Y Y D E ++ NA S+QRFKGLGEM P QLW+TT+NPE R L ++
Sbjct: 550 QKGKNIYYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMNPQQLWDTTMNPETRRLIRVT 606
Query: 583 IEDAAEANVVFSSLMGARVDTRKE-LIQNAANLVNLD 618
IEDAAEA+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 607 IEDAAEADRLFSILMGEQVGPRREFIIQHAKEVMNID 643
>gi|227518104|ref|ZP_03948153.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227555689|ref|ZP_03985736.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229547125|ref|ZP_04435850.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|229550695|ref|ZP_04439420.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|255974526|ref|ZP_05425112.1| subunit B [Enterococcus faecalis T2]
gi|256618523|ref|ZP_05475369.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256761858|ref|ZP_05502438.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256854985|ref|ZP_05560346.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256957011|ref|ZP_05561182.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256960820|ref|ZP_05564991.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256963987|ref|ZP_05568158.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|257078688|ref|ZP_05573049.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|257081351|ref|ZP_05575712.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|257084008|ref|ZP_05578369.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|257087838|ref|ZP_05582199.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|257088490|ref|ZP_05582851.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257417430|ref|ZP_05594424.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257421347|ref|ZP_05598337.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|293382658|ref|ZP_06628586.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|293387930|ref|ZP_06632466.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294781253|ref|ZP_06746600.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|307268921|ref|ZP_07550285.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|307274016|ref|ZP_07555226.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|307276495|ref|ZP_07557615.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|307284063|ref|ZP_07564233.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|307287177|ref|ZP_07567248.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|307296594|ref|ZP_07576414.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|312901292|ref|ZP_07760575.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|312903111|ref|ZP_07762292.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|312908810|ref|ZP_07767749.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|312951716|ref|ZP_07770610.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|312979548|ref|ZP_07791230.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|384511969|ref|YP_005707062.1| DNA topoisomerase subunit B [Enterococcus faecalis OG1RF]
gi|384517111|ref|YP_005704416.1| DNA gyrase subunit B [Enterococcus faecalis 62]
gi|397698588|ref|YP_006536376.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|421514187|ref|ZP_15960879.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|422685146|ref|ZP_16743370.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|422688143|ref|ZP_16746303.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|422691568|ref|ZP_16749602.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|422694316|ref|ZP_16752309.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|422697302|ref|ZP_16755247.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|422701013|ref|ZP_16758855.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|422702817|ref|ZP_16760646.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|422707514|ref|ZP_16765207.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|422709081|ref|ZP_16766595.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|422713181|ref|ZP_16769937.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|422717804|ref|ZP_16774478.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|422719193|ref|ZP_16775841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|422723320|ref|ZP_16779858.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|422726393|ref|ZP_16782841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|422728188|ref|ZP_16784606.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|422730566|ref|ZP_16786955.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|422734914|ref|ZP_16791194.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|422741701|ref|ZP_16795724.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|422868246|ref|ZP_16914793.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|424671212|ref|ZP_18108224.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|424683876|ref|ZP_18120621.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|424685955|ref|ZP_18122632.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|424689103|ref|ZP_18125694.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|424692845|ref|ZP_18129320.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|424696423|ref|ZP_18132774.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|424699254|ref|ZP_18135482.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|424704132|ref|ZP_18140238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|424707526|ref|ZP_18143505.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|424716672|ref|ZP_18145975.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|424719090|ref|ZP_18148314.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|424722657|ref|ZP_18151696.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|424726151|ref|ZP_18154831.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|424734721|ref|ZP_18163210.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|424749321|ref|ZP_18177433.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|424757653|ref|ZP_18185389.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|430362672|ref|ZP_19427149.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|430367112|ref|ZP_19427775.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
gi|15982567|dbj|BAB69478.1| DNA gyrase B subunit [Enterococcus faecalis]
gi|227074438|gb|EEI12401.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227175199|gb|EEI56171.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229304128|gb|EEN70124.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|229307707|gb|EEN73694.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|255967398|gb|EET98020.1| subunit B [Enterococcus faecalis T2]
gi|256598050|gb|EEU17226.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256683109|gb|EEU22804.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256709498|gb|EEU24545.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256947507|gb|EEU64139.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256951316|gb|EEU67948.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256954483|gb|EEU71115.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|256986718|gb|EEU74020.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|256989381|gb|EEU76683.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|256992038|gb|EEU79340.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|256995868|gb|EEU83170.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|256997302|gb|EEU83822.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257159258|gb|EEU89218.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257163171|gb|EEU93131.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|291079964|gb|EFE17328.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|291082667|gb|EFE19630.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294451716|gb|EFG20171.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|295112344|emb|CBL30981.1| DNA gyrase subunit B [Enterococcus sp. 7L76]
gi|306495930|gb|EFM65518.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|306501775|gb|EFM71066.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|306503434|gb|EFM72683.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|306506822|gb|EFM75972.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|306509324|gb|EFM78384.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|306514729|gb|EFM83280.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|310625248|gb|EFQ08531.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|310630289|gb|EFQ13572.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|310633502|gb|EFQ16785.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|311287730|gb|EFQ66286.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|311291669|gb|EFQ70225.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|315026673|gb|EFT38605.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|315030118|gb|EFT42050.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|315033552|gb|EFT45484.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|315036375|gb|EFT48307.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|315143591|gb|EFT87607.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|315148271|gb|EFT92287.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|315151295|gb|EFT95311.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|315153721|gb|EFT97737.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|315155119|gb|EFT99135.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|315158751|gb|EFU02768.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|315163335|gb|EFU07352.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|315165723|gb|EFU09740.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|315168224|gb|EFU12241.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|315170508|gb|EFU14525.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|315174178|gb|EFU18195.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|315573987|gb|EFU86178.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|315578843|gb|EFU91034.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|315581938|gb|EFU94129.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|323479244|gb|ADX78683.1| DNA gyrase, B subunit [Enterococcus faecalis 62]
gi|327533858|gb|AEA92692.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
faecalis OG1RF]
gi|329576322|gb|EGG57837.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|397335227|gb|AFO42899.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|401672707|gb|EJS79173.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|402359313|gb|EJU93949.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|402363750|gb|EJU98209.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|402368565|gb|EJV02877.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|402369341|gb|EJV03626.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|402376725|gb|EJV10651.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|402376743|gb|EJV10666.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|402377901|gb|EJV11789.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|402382703|gb|EJV16353.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|402384310|gb|EJV17868.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|402387286|gb|EJV20771.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|402397208|gb|EJV30238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|402400529|gb|EJV33351.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|402401442|gb|EJV34216.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|402406399|gb|EJV38956.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|402406469|gb|EJV39020.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|402407982|gb|EJV40478.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|429511943|gb|ELA01563.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|429516769|gb|ELA06246.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
Length = 649
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A +I+V + D+S++V D+GRGIP+ +
Sbjct: 35 MYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS SL+V V++DG Y+Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTSLDVRVYKDGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +D + +A R+RELAFLN
Sbjct: 153 EYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED + EY + GG++ YV+ LN +K + + + + IT++++
Sbjct: 209 GLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNANKDVIFPEPIFIEGEQQDITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K SLTR +N +K K +K+ D L+GE
Sbjct: 267 MQY-TDGYHSNILSFANNIHTYEGGTHESGFKTSLTRVINDYARKQKLMKENDEKLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+ EY T++L +P V I+ K
Sbjct: 326 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEYFTKFLMENPTVGKQIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GMLASKARLAAKRAREVTRRKGALEISNLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC----YDDA 535
I+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y + +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKHAEE 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL KV P++ S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA EA+ +F
Sbjct: 565 ELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMDPEKRLMARVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|410458121|ref|ZP_11311884.1| DNA gyrase subunit B [Bacillus azotoformans LMG 9581]
gi|409931749|gb|EKN68725.1| DNA gyrase subunit B [Bacillus azotoformans LMG 9581]
Length = 641
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/621 (52%), Positives = 426/621 (68%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I+V + ADNS++V DNGRGIP+ +
Sbjct: 32 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCTEIKVTIEADNSITVTDNGRGIPVGIQEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V DG ++
Sbjct: 92 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHLDGKIHYI 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG V L + D+ GT + F PD ++F ++++ +A R+RELAFLN
Sbjct: 150 KFERGAVVEELKV----IGETDKTGTIVHFSPDPEIFQETTVYEYDVLATRLRELAFLNR 205
Query: 181 KLTIALRKEDSDPE-KNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
L + + ED PE K Q+ + + GG+ YV+ LN ++ +H+ V + DGIT ++
Sbjct: 206 GLNLII--EDKRPEGKTQH--WCYEGGIISYVEHLNRSREVIHEEPVYVMGEKDGITAEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D+Y + +AN+I T +GGTH G K +LTR +N +KS K+ D +L+G+
Sbjct: 262 ALQY-NDSYVSNIYSFANNIHTYEGGTHEVGFKTALTRVINDYARKSGMFKENDPNLTGD 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P+P+FEGQTKT+LGN EVR +VD E L ++L +P V I+
Sbjct: 321 DVREGLTTIISVKHPDPQFEGQTKTKLGNSEVRAIVDSVFSEQLDKFLMENPSVGKKIVE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K L A +A +AAK+AR+L R+K L SSLPGKLADCSS SE++IVEGDSAGGSAK
Sbjct: 381 KGLMASRARIAAKKARELTRRKGALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYHKI
Sbjct: 441 SGRDRHFQAILPLRGKILNVEKARLDRILSNNEIRTIITALGTGI-GEDFDISKARYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTFFYR+ K + + G IY+ PPLYKV++GK+V Y Y+D EL+
Sbjct: 500 VIMTDADVDGAHIRTLLLTFFYRFMKPIIENGYIYIAQPPLYKVQQGKKVIYAYNDRELE 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + P N S+QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ VF LMG
Sbjct: 560 AVLAELPDNPKPSLQRYKGLGEMNPEQLWETTMDPEVRTLLQVQLQDAMEADEVFEILMG 619
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ NA + NLD
Sbjct: 620 DQVEPRREFIQENARYVKNLD 640
>gi|399924562|ref|ZP_10781920.1| DNA gyrase subunit B [Peptoniphilus rhinitidis 1-13]
Length = 637
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/623 (49%), Positives = 438/623 (70%), Gaps = 16/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AG +I V + D SV ++DNG GIP+ HP
Sbjct: 28 MYIGSTGARGLHHLVYEVVDNSIDEALAGICDHIIVKINKDGSVEISDNGSGIPVATHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLT+LHAGGKF +S Y VSGGLHGVG+SVVNALS L T+ RDG Y Q
Sbjct: 88 TGKSTVETVLTILHAGGKF--DNSAYKVSGGLHGVGVSVVNALSNKLVATIKRDGKIYRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++RGK + L +V+ K+ GT I F PD +F T ++F + ++ R RE+AFLN
Sbjct: 146 EFARGKRKSEL--NVIGKTKKEDTGTTIYFEPDDTIFET-VEFSFDVLSKRFREMAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I E D KN Y + GG++ +V+++N KKP+HD + + ++ + +++A
Sbjct: 203 GIKI----EFIDERKNIKEIYHYEGGIKSFVEFINEKKKPIHDEIIYIDEIREETAVEIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+YS+ +L +AN+I T +GG+H+ G +++LTRTLN G+K+ +K+K+ +LSGE
Sbjct: 259 IQY-TDSYSEVVLAFANNINTEEGGSHLSGFRSALTRTLNDYGRKNNIIKEKEENLSGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG++ +ISV++P+P+FEGQTK +LGN E R ++D + E L+ +LE +P V IL K
Sbjct: 318 VREGISAVISVKLPDPQFEGQTKAKLGNSETRGIIDSVLSEELSAFLEENPKVGKQILDK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+LSA +A AA+RARDL R+K+ + S +LPGKL+DC + P +EIF+VEG+SAGGSAK
Sbjct: 378 ALSARRAREAARRARDLTRKKNNIESMTLPGKLSDCQNDDPSRNEIFLVEGNSAGGSAKD 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD +QAILPLRGKI+NVE+ M + EI+ +I A G G+ GE+F + LRY KII
Sbjct: 438 GRDSAYQAILPLRGKIMNVEKARLDKMLNSSEIRAMITAFGTGI-GEEFDIKKLRYDKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDDAELK 538
I+TDADVDGAHI TLLLTFF+RY K L +EG +YV PL+ +E+G ++ +YC+++ EL+
Sbjct: 497 IMTDADVDGAHIMTLLLTFFFRYMKPLIEEGHVYVAQAPLFGIEKGTKILRYCHNEKELR 556
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + +I+R+KGLGEM P QLWETT+NP+ R+L ++ I+D EA+ F+ LMG
Sbjct: 557 LAVKEYKDTKI-NIKRYKGLGEMDPEQLWETTMNPDNRLLLKVNIDDITEADDTFTVLMG 615
Query: 599 ARVDTRKELIQNAANLVNLDHLD 621
V+ R+E I N V D++D
Sbjct: 616 TEVEPRREFI--TENAVYADYID 636
>gi|255971553|ref|ZP_05422139.1| DNA gyrase subunit B [Enterococcus faecalis T1]
gi|255962571|gb|EET95047.1| DNA gyrase subunit B [Enterococcus faecalis T1]
Length = 649
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A +I+V + D+S++V D+GRGIP+ +
Sbjct: 35 MYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS SL+V V++DG Y+Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTSLDVRVYKDGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +D + +A R+RELAFLN
Sbjct: 153 EYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED + EY + GG++ YV+ LN +K + + + + IT++++
Sbjct: 209 GLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNANKDVIFPEPIFIEGEQQDITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K SLTR +N +K K +K+ D L+GE
Sbjct: 267 MQY-ADGYHSNILSFANNIHTYEGGTHESGFKTSLTRVINDYARKQKLMKENDEKLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+ EY T++L +P V I+ K
Sbjct: 326 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEYFTKFLMENPTVGKQIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GMLASKARLAAKRAREVTRRKGALEISNLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC----YDDA 535
I+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y + +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKHAEE 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL KV P++ S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA EA+ +F
Sbjct: 565 ELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMDPEKRLMARVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|418312245|ref|ZP_12923755.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
gi|365238593|gb|EHM79425.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
Length = 644
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 427/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ + YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNEIIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIKITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNANQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|189464548|ref|ZP_03013333.1| hypothetical protein BACINT_00891 [Bacteroides intestinalis DSM
17393]
gi|189438338|gb|EDV07323.1| DNA gyrase, B subunit [Bacteroides intestinalis DSM 17393]
Length = 653
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/628 (47%), Positives = 424/628 (67%), Gaps = 18/628 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISTKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P+ V + + D GTR +FWPD +FT + +++ +A R+RELA+LN
Sbjct: 151 EYECGHPLYP----VKEIGTSDITGTRQQFWPDNTIFTDTV-YNYEILATRMRELAYLNA 205
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L D E N E F++ GL+E+V+++++ ++ L +DV+ + G ++
Sbjct: 206 GIKITLTDLRVKDEENNAKMEIFYSEEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL +K ++ + ++G
Sbjct: 266 VAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYADDNKMLEKAKVEIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP ++
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVMGAVDQAVGEALNYYLEEHPKEAKMVV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGRDRRFQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+ +
Sbjct: 445 KQGRDRRFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVNTEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY K+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIRNGYLYIATPPLYLCKKGKVEEYCW 564
Query: 533 DDAELKKVKSSF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
D + +K ++ S + QR+KGLGEM P QLW TT+NPE RMLKQ+ IE+AAE +
Sbjct: 565 TDQQRQKFIDTYGGGSESAVHTQRYKGLGEMNPEQLWSTTMNPENRMLKQISIENAAEVD 624
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 625 YIFSMLMGEDVGPRREFIEKNATYANID 652
>gi|119355886|ref|YP_910530.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
gi|119353235|gb|ABL64106.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
Length = 643
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/620 (49%), Positives = 418/620 (67%), Gaps = 18/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHL+YEI+DN++DE G+ I V+L D SV+V D+GRGIP+D+HP
Sbjct: 32 MYIGDIHTRGLHHLIYEIVDNSIDETLGGFNEYIFVSLNPDGSVTVIDHGRGIPVDIHPQ 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF S Y VSGGLHGVG SVVNALSE EV V+RDG Y Q
Sbjct: 92 KQKSALELVMTVIGAGGKFDKGS--YKVSGGLHGVGASVVNALSEWCEVEVYRDGKAYFQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P +V + D++GT+ F PD +F T +F + I R+RELAFLN
Sbjct: 150 RFERGVP----QGNVREIGLSDQKGTKTTFKPDNLIFKTT-EFRKDIIIDRMRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L+I ++ D E + + GGL+E+V++ + ++ L + + F + D +++A
Sbjct: 205 NLSITVQDADGAQEI-----FHYEGGLKEFVRFTDINRLSLIKEPIYFIGERDTTIVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN +K+ +K+ +SL+G+
Sbjct: 260 LQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNLYAQKNDLLKNLKLSLTGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V E L+E+ E +P+V+ I+ K
Sbjct: 319 FKEGLTAVISVKVEEPQFEGQTKTKLGNSETQSIVESIVNELLSEFAESNPNVIKMIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQ
Sbjct: 379 VKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KII
Sbjct: 439 GRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSPEKLRYGKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+RY ++L + G +Y+ PPLY V+ GK QY +DD E
Sbjct: 499 IMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVYIAQPPLYLVKSGKDQQYAWDDEERNS 558
Query: 540 VKSSFPS----NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+ + A IQR+KGLGEM P QLW TT++P R L Q+ +E+A EA+ +FS+
Sbjct: 559 ITDTLKKMQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLQVSVENAREADQIFST 618
Query: 596 LMGARVDTRKELIQNAANLV 615
LMG +V+ R+E I+ A V
Sbjct: 619 LMGDKVEPRREFIEKNARYV 638
>gi|315917788|ref|ZP_07914028.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
gi|317059526|ref|ZP_07924011.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313685202|gb|EFS22037.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313691663|gb|EFS28498.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
Length = 638
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/614 (49%), Positives = 418/614 (68%), Gaps = 9/614 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L DN + V DNGRGIP+D+HP
Sbjct: 24 MYIGTTSARGLHHLVWEVVDNSVDEALAGYCNTITVSILPDNIIQVEDNGRGIPVDIHPK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE E+ V RDG Y+Q
Sbjct: 84 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISVVNALSEWTEIKVKRDGNVYYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP+ + + +++ D GT + F PD ++F T I F++ + R++ELA+LN
Sbjct: 142 KYLRGKPIEDVKI-ISSLEAGDTTGTTVTFKPDAEIFETVI-FEYEVLQHRLKELAYLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I L D E + ++ F GG+ ++++ + + + L + + + +D+A
Sbjct: 200 GLEINLL--DCRNEIGKKEKFQFEGGISDFLKEVTHENQVLLSKQIHVEGQAEQVGVDIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + S+T+ + N+I T +GGTH+ G + LT+ +N +GK +K+KD L G
Sbjct: 258 FTYTT-SQSETIYSFVNNINTTEGGTHVTGFRTCLTKVINDIGKSQGFLKEKDGKLQGGD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IISV+VP P+FEGQTKT+LGN EV +V+ + L +LE +P+ I+ K
Sbjct: 317 IREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNSVLSVDLKIFLEDNPNDTKLIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA+RAR+ V +KSVL SLPGKLADCSS EE EIF+VEGDSAGGSAKQ
Sbjct: 377 ILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSKKSEECEIFLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ ++EEI+ ++ A G + E F LRY KII
Sbjct: 437 GRDRYFQAILPLKGKILNVEKAGLHKALESEEIRAMVTAFGTNIGEESFDLNKLRYGKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYK+ GK ++Y Y DA+LK+
Sbjct: 497 LMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKISFGKSIRYAYTDAQLKE 556
Query: 540 VKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ S N Y++QR+KGLGEM P QLWETT++PE R+L ++ I++A EA+++F LMG
Sbjct: 557 ILQSVEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVSIDNAREADMLFDKLMG 616
Query: 599 ARVDTRKELIQNAA 612
+V+ R+E IQ A
Sbjct: 617 DKVEPRREFIQEHA 630
>gi|227485761|ref|ZP_03916077.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
gi|227236316|gb|EEI86331.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
Length = 642
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/619 (51%), Positives = 427/619 (68%), Gaps = 20/619 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AG I+V + DN VSV D+G GIP+ HP
Sbjct: 35 MYIGSTSSRGLHHLVYEVVDNSVDEALAGRCDYIKVTINKDNVVSVEDDGSGIPVKEHPT 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T+KS LETVLTVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V RDG Y
Sbjct: 95 THKSTLETVLTVLHAGGKF--DDSAYKVSGGLHGVGVSVVNALSEYLIAEVKRDGHVYKM 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++RG+ +T + + GT+I F PD ++F T I F+ + + R RE+AFLN
Sbjct: 153 EFARGE----VTKDIEVIGDTTETGTKITFKPDGEIFDTTI-FERSILENRFREMAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV-GFRKDVDGITIDLA 239
+ I D +N + F GG+ E+V +LN +K P+ +++ F +GI ++ A
Sbjct: 208 GVEIRFE----DERENFETSFKFEGGISEFVSFLNRNKDPIMEMIPHFDGSQEGIEVEFA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D YS+ +L YAN+I+T +GGTH+ G+++SLTR++N +K +KD + +L GE
Sbjct: 264 FQY-TDGYSENILSYANNIQTPEGGTHLSGLRSSLTRSVNDYARKYNFIKDNEENLQGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T IISV++ +P+FEGQTK++LGN EVR VVD V E+LT +LE +P SI+ K
Sbjct: 323 IREGITAIISVKISDPQFEGQTKSKLGNSEVRGVVDSYVSEHLTAFLEENPKPAKSIIDK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L++ +A AA++ARDL R++S+L S++LPGKLADC ST E+EIFIVEG+SAGGSAK
Sbjct: 383 ALASRRAREAARKARDLTRKRSILDSATLPGKLADCQSTDISENEIFIVEGNSAGGSAKG 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKI+NVE+ + +EEI+N+I A G G+ G++F LRY KII
Sbjct: 443 GRDNRIQAILPLRGKIMNVEKAHLDKVLNSEEIKNMITAFGTGI-GKEFDISKLRYGKII 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L DEG +YV +PPLY++ +GK+ +Y Y D E K
Sbjct: 502 IMTDADVDGAHIRTLLLTFFYRYMKDLIDEGHVYVALPPLYRISQGKKERYVYSDDEKDK 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV---VFSSL 596
+A + I R+KGLGEM QLWETT++P++R+L L +E+ E+ FS L
Sbjct: 562 YIKEL-GDATFKINRYKGLGEMNAEQLWETTMDPDRRVL--LRVEEDLESTTTDDTFSLL 618
Query: 597 MGARVDTRKELIQNAANLV 615
MG +V+ R+ IQ A V
Sbjct: 619 MGEKVEPRRNFIQENAKYV 637
>gi|393786129|ref|ZP_10374267.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
gi|392660493|gb|EIY54105.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
Length = 655
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/628 (48%), Positives = 423/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 36 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 96 EQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMISQVYRNGKIYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V V + GTR +FWPD +FT + + + +AGR+RELA+LN
Sbjct: 154 EYEIGKPLYP----VKEVGESEHTGTRQQFWPDNTIFTETV-YKYEILAGRMRELAYLNA 208
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
K+T+ R+ +D K + ++ GL+E+V++L + + L +DV+ + GI I+
Sbjct: 209 GIKITLTDRRVVNDEGKFKQEIFYSEEGLKEFVRYLESSRDHLINDVIYLNTEKQGIPIE 268
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
LA+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 269 LAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 327
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP I+
Sbjct: 328 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALAYYLEEHPKEAKLIV 387
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+A
Sbjct: 388 DKVVLAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTA 447
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A L
Sbjct: 448 KQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKL 507
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 508 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWT 567
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ + ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ IE+AAEA+
Sbjct: 568 DAQRQAFIDTYGGGSENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIENAAEAD 626
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 627 FIFSMLMGEDVGPRREFIEENATYANID 654
>gi|148266452|ref|YP_001245395.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|150392485|ref|YP_001315160.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH1]
gi|418876920|ref|ZP_13431162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
gi|147739521|gb|ABQ47819.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|149944937|gb|ABR50873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH1]
gi|377699237|gb|EHT23584.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
Length = 640
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 204 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 263 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 322 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 382 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 561 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|448339329|ref|ZP_21528357.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
gi|445620558|gb|ELY74054.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
Length = 642
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 302/615 (49%), Positives = 426/615 (69%), Gaps = 10/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRH 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT IRFWPD +F T + +T++ R+RELAFLN
Sbjct: 144 AFEAGEPVGDME-RVRDMEPDEETGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNS 201
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR +E++D ++ Y + GG+ E+V +LN + +HD ++ F + I ++
Sbjct: 202 GVRITLRDEREETDEGESVAETYEYDGGIREFVDYLNETRSAMHDDIIYFEDEAQNIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 262 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDNNLKG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+
Sbjct: 321 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 381 AKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY K
Sbjct: 441 KQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 500 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LM
Sbjct: 560 DRIVEEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLM 619
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 620 GDAVEPRKQFIKDHA 634
>gi|423484484|ref|ZP_17461173.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-2]
gi|401137945|gb|EJQ45520.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-2]
Length = 642
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 430/622 (69%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + DR GT RF PD+++FT +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGETDRTGTITRFKPDEEIFTETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|418905552|ref|ZP_13459579.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764852|gb|EHT88702.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 644
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHDDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|237720397|ref|ZP_04550878.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262405441|ref|ZP_06081991.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|294646223|ref|ZP_06723877.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|298480563|ref|ZP_06998760.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|336404477|ref|ZP_08585172.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|345510630|ref|ZP_08790194.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|423214870|ref|ZP_17201398.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
gi|229442648|gb|EEO48439.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|229450148|gb|EEO55939.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262356316|gb|EEZ05406.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|292638441|gb|EFF56805.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|295086258|emb|CBK67781.1| DNA gyrase subunit B [Bacteroides xylanisolvens XB1A]
gi|298273384|gb|EFI14948.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|335942274|gb|EGN04121.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|392692133|gb|EIY85371.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
Length = 652
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/628 (48%), Positives = 427/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTADITGTRQQFWPDGTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L R+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQVIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|288925541|ref|ZP_06419474.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315606674|ref|ZP_07881685.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|402307320|ref|ZP_10826346.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
gi|288337757|gb|EFC76110.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315251684|gb|EFU31662.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|400378834|gb|EJP31685.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
Length = 656
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 313/634 (49%), Positives = 425/634 (67%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLV E +DN++DEA AGY NIEV + DNS++V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLVNETVDNSIDEAMAGYCKNIEVTINEDNSITVQDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V DRQGTR +FWPD VFTT + + + IA R+RELAFLN
Sbjct: 149 EYEKGKPLYPVKV----VGETDRQGTRQQFWPDPTVFTTTV-YKWDIIASRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I LR D E E F A GL+E+V++++ + L D V+ + + G+ I++
Sbjct: 204 GIRITLRDLRPDEEGKTREEVFHAEQGLKEFVRYVDRHRTHLFDDVIYLKTEKQGVPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTR L + SK ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRVLKAYADNDAQISKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALNNYLEEHPVEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++KSV+ LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 KICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK K +
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCTYKKASE 562
Query: 530 YCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
YCY + + K V+ AL++ QR+KGLGEM P QLWETT++P R+LKQ+ I+
Sbjct: 563 YCYTEQQRQAFIDKYVEGREDDKALHT-QRYKGLGEMNPEQLWETTMDPATRLLKQVNIQ 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 NAAEADEIFSMLMGDDVEPRREFIEKNATYANID 655
>gi|293376413|ref|ZP_06622647.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909]
gi|325839309|ref|ZP_08166775.1| DNA gyrase, B subunit [Turicibacter sp. HGF1]
gi|292644969|gb|EFF63045.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909]
gi|325490591|gb|EGC92906.1| DNA gyrase, B subunit [Turicibacter sp. HGF1]
Length = 639
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/620 (52%), Positives = 430/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGY + I VA+ +N + V DNGRGIP+D+H
Sbjct: 30 MYIGSTSGRGLHHLVWEIVDNSIDEALAGYCTEINVAITENNEIIVKDNGRGIPVDVHKQ 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETV TVLHAGGK GY VSGGLHGVG SVVNALSE LEVTV R+G +Y Q
Sbjct: 90 TGKSTVETVYTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSEYLEVTVSRNGKKYFQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G P+ L HV + D GT ++F PD ++FT +D++ + RIRELAFLN
Sbjct: 148 SFEKGTPMNEL--HV--IGESDTTGTEVKFKPDPEIFTETTVYDYDILRNRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L ED EK Q +E+ F GG+ EYV +LN +K+ +H DV+ + DGI++++A
Sbjct: 204 GLKITL--EDLRSEKPQRHEFHFEGGISEYVSFLNKNKEVIHEDVIYVEGERDGISVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + + + +AN+I T +GGTH G +A+LTR +NS KK+ +K D +L GE
Sbjct: 262 MQYNT-GVAGNIYSFANNINTHEGGTHEAGFRAALTRIINSYAKKANLLKGDD-ALIGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IIS + P+P+FEGQTKT+LGN EVR++ D E +L +P IL K
Sbjct: 320 IREGLTAIISAKHPDPQFEGQTKTKLGNSEVRRIADNVFSEGFERFLMENPQAAKLILDK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A +AAKRAR++VR+KS L S KLADC S SE+FIVEGDSAGGSAKQ
Sbjct: 380 SLMAARARMAAKRAREMVRRKSPLESLGFKSKLADCQSRDANISELFIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD +FQAILPLRGK+LNVE+ +Y N EI+++I A+G GV G++F E RYHK++
Sbjct: 440 GRDNKFQAILPLRGKVLNVEKARIDKVYANNEIKSMIHAIGTGV-GDEFDIEKARYHKVV 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPL+K+ +GK+++Y Y EL+
Sbjct: 499 IMTDADVDGAHIRTLLLTFFYRYMRPLIENGYVYIAQPPLFKISQGKRIEYAYSQEELEA 558
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V + + ++QR+KGLGEM QLWETT++PE R L Q+ ++DA EA+ +F LMG
Sbjct: 559 VMETLSATPRPNVQRYKGLGEMNAEQLWETTMDPEVRTLLQVTLDDAVEADEIFDMLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
RV+ R+E I NA + NLD
Sbjct: 619 RVEPRREFIDANAKYVTNLD 638
>gi|383111025|ref|ZP_09931843.1| DNA gyrase, B subunit [Bacteroides sp. D2]
gi|313694595|gb|EFS31430.1| DNA gyrase, B subunit [Bacteroides sp. D2]
Length = 652
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 305/628 (48%), Positives = 422/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRDGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTADITGTRQQFWPDNTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I L E + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRITLTDRRVVNEDGSFKGEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDATKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + E+ KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEEDSKEANIQKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|49484917|ref|YP_042138.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|386829730|ref|YP_006236384.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|49243360|emb|CAG41777.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|385195122|emb|CCG14722.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 643
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 33 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 93 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 151 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 207 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 266 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 325 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 385 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 564 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|333922243|ref|YP_004495823.1| DNA gyrase subunit B [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747804|gb|AEF92911.1| DNA gyrase, B subunit [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 636
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/623 (52%), Positives = 431/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + I V + DNSV+V DNGRGIP+DLHP
Sbjct: 28 MYIGSTSSRGLHHLVYEVVDNSIDEALAGFCNRISVVIHKDNSVTVEDNGRGIPVDLHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHAGGKFGG S LHGVG+SVVNALSE LEV + R+G YHQ
Sbjct: 88 VGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEKLEVEIKRNGNIYHQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRG PV+ L + GT++ F PD ++F F T+A R+RELA+LN
Sbjct: 146 AYSRGVPVSELKI----IGKSKSTGTKVTFKPDPEIFEETT-FSLETLAQRLRELAYLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I ++ E DP Q + F GG+ ++V+ LN +K+ LH V G ++ I +
Sbjct: 201 GVKITIKDERKDPPVEQ--TFQFDGGIRDFVKHLNRNKQVLHSKPIYVTGEKEQ---IIV 255
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y++ +L +AN+I T+DGGTH G K +LTR +N G+ +K+ D +LS
Sbjct: 256 EIALQY-NDTYNENILSFANNIHTVDGGTHEIGFKTALTRVVNDYGRNHNLLKNNDPNLS 314
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REG T +ISV+V P+FEGQTKT+LGN EVR +VD + L YLE +P V I
Sbjct: 315 GEDIREGATVVISVKVREPQFEGQTKTKLGNSEVRGIVDSIFADGLATYLEENPTVGKRI 374
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+++A +A AA++AR+L R+KS L + SLPGKLADCS P SE+++VEGDSAGGS
Sbjct: 375 IEKAITAARAREAARKARELTRRKSALDTMSLPGKLADCSEKDPSVSELYLVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G+DF RYH
Sbjct: 435 AKQGRDRRFQAILPLRGKILNVEKARMDKILANEEIRAMITALGCGI-GQDFDISKARYH 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL++V +GK Y Y D E
Sbjct: 494 KIIIMTDADVDGAHIRTLLLTFFYRHMRPLIEAGYVYIAQPPLFRVRKGKLDSYVYSDHE 553
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ + + +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDA EA+ FS L
Sbjct: 554 LEELLKRVGYDNV-NIQRYKGLGEMNPEQLWETTMDPDTRTVLQVTLEDAIEADATFSML 612
Query: 597 MGARVDTRKELIQ-NAANLVNLD 618
MG RV+ R++ IQ NA + NLD
Sbjct: 613 MGDRVEPRRDFIQENAQYVRNLD 635
>gi|193211690|ref|YP_001997643.1| DNA gyrase subunit B [Chlorobaculum parvum NCIB 8327]
gi|193085167|gb|ACF10443.1| DNA gyrase, B subunit [Chlorobaculum parvum NCIB 8327]
Length = 647
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 308/624 (49%), Positives = 419/624 (67%), Gaps = 19/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYEI+DN++DE AG+ I VA+ D SV+V D GRGIP+D+HP
Sbjct: 36 MYIGDIHSRGLHHLVYEIVDNSIDETLAGFNDYIHVAMNPDGSVTVTDRGRGIPVDIHPV 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE E V+RDG + Q
Sbjct: 96 KKKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEAEVYRDGKIFRQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V V + D++GT++ F PD +F +F + I R+RELAFLN
Sbjct: 154 TYKRGVP----QGGVEEVGTTDQKGTKVTFKPDPDIFKIT-EFRKDIIIDRMRELAFLNS 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLA 239
L I ++ + E + F GGL E+V++ + ++ L + + + + +++A
Sbjct: 209 NLRIIVQDAEGFEET-----FHFEGGLREFVRFTDANRLSLLKEPIFLSGERESTMVEIA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ I+L+G+
Sbjct: 264 LQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNVKITLTGDD 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+EGLT +ISV+VP P+FEGQTKT+LGN E + +V+ V E L E+ E +P L I+ K
Sbjct: 323 FKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVETIVNEQLAEFAESNPGTLKLIIEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A + AA++A++L R+KSVL SS LPGKLADCS P+ E++IVEGDSAGGSAKQ
Sbjct: 383 VKGAAISREAARKAKELTRRKSVLESSGLPGKLADCSINDPDHCELYIVEGDSAGGSAKQ 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG + E+F E LRY KII
Sbjct: 443 GRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSIGEEEFSPEKLRYGKII 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLTFF+RY ++L + G +++ PPLY V+ G++ QY +D+ E
Sbjct: 503 IMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLVKAGREQQYAWDEEERAS 562
Query: 537 -LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
+++K A SIQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+
Sbjct: 563 ITEQMKKLQKGKANVSIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVTVENAMEADQVFST 622
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+ I QNA + LD
Sbjct: 623 LMGDKVEPRRNFIEQNAKYVRRLD 646
>gi|21281734|ref|NP_644820.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87161454|ref|YP_492727.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88193828|ref|YP_498613.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220216|ref|YP_001331039.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161508271|ref|YP_001573930.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253733834|ref|ZP_04867999.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|258451362|ref|ZP_05699393.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|262049437|ref|ZP_06022309.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|262051893|ref|ZP_06024108.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|282902636|ref|ZP_06310529.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|282918073|ref|ZP_06325823.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282920724|ref|ZP_06328443.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282921295|ref|ZP_06329013.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|283767795|ref|ZP_06340710.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|297209447|ref|ZP_06925845.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300911471|ref|ZP_07128920.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|379013370|ref|YP_005289606.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|379019818|ref|YP_005296480.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|384546274|ref|YP_005735527.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ED133]
gi|387779222|ref|YP_005754020.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|415687298|ref|ZP_11451225.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|416845644|ref|ZP_11906099.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|417648054|ref|ZP_12297884.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|417799292|ref|ZP_12446436.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|417897325|ref|ZP_12541262.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|417899938|ref|ZP_12543838.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|417905250|ref|ZP_12549062.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|418286939|ref|ZP_12899575.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|418318231|ref|ZP_12929640.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|418561814|ref|ZP_13126292.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|418569364|ref|ZP_13133697.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|418577923|ref|ZP_13142021.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|418596805|ref|ZP_13160353.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|418641274|ref|ZP_13203487.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|418648772|ref|ZP_13210809.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|418650154|ref|ZP_13212176.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|418657144|ref|ZP_13218921.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|418658950|ref|ZP_13220646.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|418902289|ref|ZP_13456333.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|418910550|ref|ZP_13464538.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|418927294|ref|ZP_13481184.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|418933015|ref|ZP_13486841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|418949662|ref|ZP_13501899.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|418986990|ref|ZP_13534666.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|419773340|ref|ZP_14299349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|422742288|ref|ZP_16796295.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745337|ref|ZP_16799280.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|440708266|ref|ZP_20888936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|440736072|ref|ZP_20915673.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|448740839|ref|ZP_21722813.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|448744200|ref|ZP_21726100.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
gi|59797750|sp|Q6GD85.3|GYRB_STAAS RecName: Full=DNA gyrase subunit B
gi|59799585|sp|P0A0K7.2|GYRB_STAAW RecName: Full=DNA gyrase subunit B
gi|59799586|sp|P0A0K8.2|GYRB_STAAU RecName: Full=DNA gyrase subunit B
gi|93204588|sp|Q2FKQ1.3|GYRB_STAA3 RecName: Full=DNA gyrase subunit B
gi|296395|emb|CAA50570.1| DNA gyrase [Staphylococcus aureus]
gi|540541|dbj|BAA01369.1| DNA gyrase B [Staphylococcus aureus]
gi|21203169|dbj|BAB93870.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87127428|gb|ABD21942.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201386|gb|ABD29196.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150373016|dbj|BAF66276.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160367080|gb|ABX28051.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253728137|gb|EES96866.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|257860892|gb|EEV83709.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|259160220|gb|EEW45249.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|259162434|gb|EEW47004.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|282315710|gb|EFB46094.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|282318358|gb|EFB48718.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282594132|gb|EFB99120.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282597095|gb|EFC02054.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|283461674|gb|EFC08758.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|296885908|gb|EFH24843.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|298693327|gb|ADI96549.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED133]
gi|300887650|gb|EFK82846.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|315197923|gb|EFU28256.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|320141422|gb|EFW33265.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144405|gb|EFW36170.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|323443267|gb|EGB00884.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|329731718|gb|EGG68078.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|334274194|gb|EGL92521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|341839825|gb|EGS81379.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|341844001|gb|EGS85221.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|341844115|gb|EGS85334.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|344176324|emb|CCC86774.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|359829127|gb|AEV77105.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|365165103|gb|EHM56932.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|365243554|gb|EHM84228.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|371975308|gb|EHO92603.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|371985759|gb|EHP02813.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|374362067|gb|AEZ36172.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|374396606|gb|EHQ67837.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|375019434|gb|EHS12988.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|375025187|gb|EHS18594.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|375028623|gb|EHS21966.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|375031320|gb|EHS24602.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|375036979|gb|EHS30035.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|375378271|gb|EHS81677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|377699805|gb|EHT24151.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|377721002|gb|EHT45147.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|377728364|gb|EHT52466.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|377741004|gb|EHT65000.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|377745642|gb|EHT69618.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|377773189|gb|EHT96935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|383972913|gb|EID88936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|436429839|gb|ELP27203.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|436505158|gb|ELP41103.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|445548370|gb|ELY16622.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|445562477|gb|ELY18648.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
Length = 644
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|331270701|ref|YP_004397193.1| DNA gyrase subunit B [Clostridium botulinum BKT015925]
gi|329127251|gb|AEB77196.1| DNA gyrase, B subunit [Clostridium botulinum BKT015925]
Length = 635
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 443/621 (71%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEI+DN++DEA AG+ NI+V + +NSV+V D+GRG+P+ +HP
Sbjct: 27 MYIGSTGIRGLHHLVYEIVDNSIDEALAGFCQNIKVYIHKNNSVTVKDDGRGMPVGIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E ++TVLHAGGKFGG S LHGVG SVVNALS+ +V V R+G + Q
Sbjct: 87 MKRPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSKYCKVEVRREGHVWMQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GK + L + + +GT + F PD ++F ++FD++T++ R+RELAFLN
Sbjct: 145 EYKKGKVASELEV----IGDSEERGTLVYFEPDDEIFE-EVEFDYDTLSHRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
I L E + E+ E+ + GG++ +V +LN +K+ LH+ + + D +++A
Sbjct: 200 GTRIILVDEREEKEQ----EFHYEGGIKSFVSYLNRNKQTLHEEPIYVEGNKDDYLVEVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y+D + +AN+I TI+GGTH+ G K++LTR LN ++ +K+ D +LSG+
Sbjct: 256 LQY-NDTYNDNIFAFANNIDTIEGGTHLAGFKSALTRVLNDYARRYGYLKETDKNLSGDD 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E ++E+LE +PD +++ K
Sbjct: 315 TREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDSIVSERVSEFLEENPDTAKTVIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL+A +A AAK+AR+L R+KSVL S++LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 375 SLTAARAREAAKKARELTRRKSVLESTALPGKLADCSSKDPSECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE++ + +E+I+ +I A G G+ G+DF E +RYH+II
Sbjct: 435 GRDRRFQAILPLRGKIMNVEKQRLDKILNSEQIRAMITAFGAGI-GKDFDIEKIRYHRII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTFFYRY + L + G +Y+ PPLY+V+RGK ++Y Y D ELK+
Sbjct: 494 IMTDADVDGAHIATLLLTFFYRYMRELVEGGHVYIAQPPLYQVKRGKVIRYSYSDNELKQ 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + + IQR+KGLGEM QLW+TT+NPE R L ++ I+DA A+ VF+ LMG
Sbjct: 554 VLTELGGKDKNTEIQRYKGLGEMDATQLWDTTMNPEHRTLVKVTIDDAMRADEVFTILMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+E I +NA +VNLD
Sbjct: 614 DKVEPRREFIEENAKKVVNLD 634
>gi|57651113|ref|YP_184916.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL]
gi|81859679|sp|Q5HJZ1.3|GYRB_STAAC RecName: Full=DNA gyrase subunit B
gi|57285299|gb|AAW37393.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL]
Length = 644
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|242372598|ref|ZP_04818172.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
gi|242349653|gb|EES41254.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
Length = 643
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 420/619 (67%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYADQIEVIIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V+R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVYRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L + D+ GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EIGETDQTGTAIRFKADGDIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I LR E E+ + + Y + GG++ YV+ LN +K+P+H + + + D I +++A
Sbjct: 208 GIQITLRDERE--EEVREDSYHYEGGIKSYVELLNENKEPIHQEPIYIHQTKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE
Sbjct: 266 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K
Sbjct: 325 TREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPSVGRIIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K
Sbjct: 385 GIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG
Sbjct: 564 LKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|326486754|gb|ADZ76420.1| DNA gyrase subunit B [Bacillus amyloliquefaciens]
Length = 588
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/598 (50%), Positives = 413/598 (69%), Gaps = 11/598 (1%)
Query: 4 GSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNK 63
GST +GLHHLV+EI+DN++DEA AGY ++I + + DNS++V DNGRGIP+ + +
Sbjct: 1 GSTSSKGLHHLVWEIVDNSIDEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEKMGR 60
Query: 64 SALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYS 123
A+E ++TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y
Sbjct: 61 PAVEVIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYE 118
Query: 124 RGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 183
RG PV L + D+ GT F PD ++F +D++ ++ R+RELAFL +
Sbjct: 119 RGVPVADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVN 174
Query: 184 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQW 242
I + ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+
Sbjct: 175 ITI--EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVIHEEPIYIEGEKDGITVEVALQY 232
Query: 243 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 302
+D+Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VRE
Sbjct: 233 -NDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVRE 291
Query: 303 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 362
GLT IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L
Sbjct: 292 GLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLM 351
Query: 363 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 422
A +A +AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRD
Sbjct: 352 AARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRD 411
Query: 423 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 482
R FQAILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+T
Sbjct: 412 RHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMT 470
Query: 483 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 542
DADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++
Sbjct: 471 DADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLK 530
Query: 543 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
P + +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +
Sbjct: 531 ELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDK 588
>gi|424677999|ref|ZP_18114846.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|424679672|ref|ZP_18116489.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
gi|402352698|gb|EJU87539.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|402355888|gb|EJU90643.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
Length = 649
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A +I+V + D+S++V D+GRGIP+ +
Sbjct: 35 MYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS SL+V V++DG Y+Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTSLDVRVYKDGKVYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +D + +A R+RELAFLN
Sbjct: 153 EYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED + EY + GG++ YV+ LN +K + + + + IT++++
Sbjct: 209 GLHISI--EDRRGGQEDKKEYHYEGGIKSYVEHLNANKDVIFPEPIFIEGEQQDITVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K SLTR +N +K K +K+ D L+GE
Sbjct: 267 MQY-TDGYHSNILSFANNIHTYEGGTHESGFKTSLTRVINDYARKQKLMKENDEKLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+ EY T++L +P V I+ K
Sbjct: 326 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEYFTKFLMENPTVGKQIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 386 GMLASKARLAAKRAREVTRRKGALEISNLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC----YDDA 535
I+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y + +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKHAEE 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL KV P++ S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA EA+ +F
Sbjct: 565 ELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMDPEKRLMARVSVDDAIEADQIFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 625 LMGDRVEPRRAFIEENAHYVKNLD 648
>gi|29374666|ref|NP_813818.1| DNA gyrase subunit B [Enterococcus faecalis V583]
gi|257418838|ref|ZP_05595832.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
gi|29342124|gb|AAO79890.1| DNA gyrase, B subunit [Enterococcus faecalis V583]
gi|257160666|gb|EEU90626.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
Length = 642
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 427/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A +I+V + D+S++V D+GRGIP+ +
Sbjct: 28 MYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS SL+V V++DG Y+Q
Sbjct: 88 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTSLDVRVYKDGKVYYQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +D + +A R+RELAFLN
Sbjct: 146 EYRRGAVVDDLKV----IEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNR 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED + EY + GG++ YV+ LN +K + + + + IT++++
Sbjct: 202 GLHISI--EDRREGQEDKKEYHYEGGIKSYVEHLNANKDVIFPEPIFIEGEQQDITVEVS 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K SLTR +N +K K +K+ D L+GE
Sbjct: 260 MQY-TDGYHSNILSFANNIHTYEGGTHESGFKTSLTRVINDYARKQKLMKENDEKLTGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN EVR V D+ EY T++L +P V I+ K
Sbjct: 319 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEYFTKFLMENPTVGKQIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 379 GMLASKARLAAKRAREVTRRKGALEISNLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 439 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC----YDDA 535
I+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y + +
Sbjct: 498 IMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKHAEE 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL KV P++ S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA EA+ +F
Sbjct: 558 ELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMDPEKRLMARVSVDDAIEADQIFEM 617
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 618 LMGDRVEPRRAFIEENAHYVKNLD 641
>gi|448346437|ref|ZP_21535322.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
gi|445632640|gb|ELY85851.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
Length = 642
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/615 (49%), Positives = 425/615 (69%), Gaps = 10/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRH 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT IRFWPD +F T + +T++ R+RELAFLN
Sbjct: 144 AFEAGEPVGDME-RVRDMEPDEETGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNS 201
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR +E++D + Y + GG+ E+V +LN + +HD V+ F + I ++
Sbjct: 202 GVRITLRDEREETDEGETVAETYEYDGGIREFVDYLNETRSAMHDDVIYFEDEAQNIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 262 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDNNLKG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+
Sbjct: 321 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 381 AKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 441 KQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 500 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 560 DAIVAEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLM 619
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 620 GDAVEPRKQFIKDHA 634
>gi|429726067|ref|ZP_19260877.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
gi|429148108|gb|EKX91121.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
Length = 661
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/638 (48%), Positives = 428/638 (67%), Gaps = 28/638 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE +DN++DEA AGY ++IEV + DNS+ V DNGRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTICKDNSIIVQDNGRGIPVDIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 EGVSALQVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS GKP+ + V DR+GTR +FWPD ++FTT + ++ +A R+RELAFLN
Sbjct: 149 EYSAGKPLYDVKV----VGQTDRRGTRQQFWPDPEIFTTTT-YRYDILANRMRELAFLNA 203
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
LTI L E + D +E F++ GL E+V++ ++ + PL DV+ + +GI ++
Sbjct: 204 GLTITLTDEREIDENGKPLSETFYSEQGLREFVRYQDSMRNPLIPDVIYINTEKEGIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTVKDKDISL 295
+A+ + + +YS+ + Y N+I TI+GGTH+ G ++++TR L +++ K ++ I +
Sbjct: 264 VAIVY-NTSYSENLHSYVNNINTIEGGTHLAGFRSAVTRVLKKYAEETAQKQIEKAKIEI 322
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE REGLT +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP
Sbjct: 323 TGEDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAVNQAVGEALTYYLEEHPKEAKL 382
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K + A A +AA++AR+ V++K+ + LPGKLADCSS PEE E+F+VEGDSAGG
Sbjct: 383 IVDKVILAATARVAARKARETVQRKNPMSGGGLPGKLADCSSKVPEECELFLVEGDSAGG 442
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL-------GVKGEDF 468
SAKQGR R QAILPLRGKILNVE+ ++++E+ N+I+ALG+ G GE
Sbjct: 443 SAKQGRSRATQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVQKEGETGEVD 502
Query: 469 KKEA----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER 524
KEA LRYHKI+I+ DADVDG HI TL++T FYRY + E +Y+ +PPLY+ +
Sbjct: 503 SKEANIDKLRYHKIVIMADADVDGQHIATLIMTLFYRYFPQVIRENHLYIAMPPLYRCRK 562
Query: 525 GKQVQYCYDDAELKKVKSSF--PSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQ 580
GK +YCY+D E + P+ SI QR+KGLGEM P QLW+TT+NPE RMLK
Sbjct: 563 GKTEEYCYNDREKDAFIEKYGDPTKGENSITLQRYKGLGEMNPTQLWDTTMNPETRMLKL 622
Query: 581 LVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ IE+AAEA+ +FS LMG V+ R++ I+ A +D
Sbjct: 623 VTIENAAEADHIFSMLMGDDVEPRRDFIERNAKYATID 660
>gi|15922995|ref|NP_370529.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|15925710|ref|NP_373243.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|156978336|ref|YP_001440595.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253316843|ref|ZP_04840056.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253730404|ref|ZP_04864569.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|254663939|ref|ZP_05143411.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793543|ref|ZP_05642522.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|258411151|ref|ZP_05681430.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|258420945|ref|ZP_05683879.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|258438584|ref|ZP_05689807.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|258443960|ref|ZP_05692298.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|258446224|ref|ZP_05694384.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|258449117|ref|ZP_05697223.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|258454405|ref|ZP_05702373.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|269201695|ref|YP_003280964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282894284|ref|ZP_06302514.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|282927755|ref|ZP_06335369.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|295406869|ref|ZP_06816673.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|296275682|ref|ZP_06858189.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MR1]
gi|297245904|ref|ZP_06929766.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|384863401|ref|YP_005748760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|385780303|ref|YP_005756474.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 11819-97]
gi|387149193|ref|YP_005740757.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|415693122|ref|ZP_11454976.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|417652015|ref|ZP_12301771.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|417654048|ref|ZP_12303776.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|417796905|ref|ZP_12444107.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|417801536|ref|ZP_12448624.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|417893975|ref|ZP_12537998.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|417900702|ref|ZP_12544581.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|418314813|ref|ZP_12926279.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|418322452|ref|ZP_12933785.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|418425904|ref|ZP_12998981.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|418428781|ref|ZP_13001761.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|418431669|ref|ZP_13004559.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|418435581|ref|ZP_13007421.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|418438336|ref|ZP_13010107.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|418441285|ref|ZP_13012958.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|418441566|ref|ZP_13013193.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|418447232|ref|ZP_13018689.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|418450330|ref|ZP_13021698.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|418453178|ref|ZP_13024493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|418456115|ref|ZP_13027361.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|418458991|ref|ZP_13030176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567448|ref|ZP_13131812.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|418573938|ref|ZP_13138118.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|418598564|ref|ZP_13162073.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|418640046|ref|ZP_13202282.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|418644043|ref|ZP_13206195.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|418653186|ref|ZP_13215131.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|418661955|ref|ZP_13223515.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|418874096|ref|ZP_13428368.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|418879712|ref|ZP_13433935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|418882673|ref|ZP_13436877.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885320|ref|ZP_13439476.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|418893491|ref|ZP_13447596.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913293|ref|ZP_13467267.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418918779|ref|ZP_13472728.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|418930156|ref|ZP_13484008.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|418989922|ref|ZP_13537586.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|419783663|ref|ZP_14309446.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|421148834|ref|ZP_15608493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424769522|ref|ZP_18196748.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|443636287|ref|ZP_21120402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443638069|ref|ZP_21122126.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
gi|54037243|sp|P66937.2|GYRB_STAAN RecName: Full=DNA gyrase subunit B
gi|54041556|sp|P66936.2|GYRB_STAAM RecName: Full=DNA gyrase subunit B
gi|13699922|dbj|BAB41221.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|14245772|dbj|BAB56167.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|156720471|dbj|BAF76888.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253725884|gb|EES94613.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257787515|gb|EEV25855.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|257840036|gb|EEV64501.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|257843135|gb|EEV67550.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|257848143|gb|EEV72135.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|257850844|gb|EEV74788.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|257855050|gb|EEV77993.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|257857550|gb|EEV80445.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|257863499|gb|EEV86259.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|262073985|gb|ACY09958.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282590515|gb|EFB95593.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|282763329|gb|EFC03459.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|285815732|gb|ADC36219.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|294968334|gb|EFG44359.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|297177269|gb|EFH36522.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|312828568|emb|CBX33410.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129548|gb|EFT85540.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|329725845|gb|EGG62324.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|329732607|gb|EGG68957.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|334267943|gb|EGL86394.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|334276580|gb|EGL94834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|341847016|gb|EGS88202.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|341853482|gb|EGS94363.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|364521292|gb|AEW64042.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
11819-97]
gi|365223481|gb|EHM64770.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|365244416|gb|EHM85075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|371980639|gb|EHO97841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|371982093|gb|EHO99253.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|374399341|gb|EHQ70482.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|375015446|gb|EHS09101.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|375019491|gb|EHS13044.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|375027023|gb|EHS20400.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|375037444|gb|EHS30478.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|377701338|gb|EHT25671.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|377718582|gb|EHT42754.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|377719156|gb|EHT43327.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|377726373|gb|EHT50485.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|377729262|gb|EHT53358.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|377734873|gb|EHT58910.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|377759336|gb|EHT83217.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769065|gb|EHT92843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|377773604|gb|EHT97349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|383364751|gb|EID42057.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|387714926|gb|EIK03037.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|387715095|gb|EIK03201.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|387715280|gb|EIK03383.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|387722714|gb|EIK10500.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|387724428|gb|EIK12085.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|387726669|gb|EIK14217.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|387732608|gb|EIK19823.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|387733965|gb|EIK21123.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|387740837|gb|EIK27760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|387741252|gb|EIK28109.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|387741729|gb|EIK28562.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|387742964|gb|EIK29766.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|394330936|gb|EJE57024.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402348167|gb|EJU83162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|408422576|emb|CCJ09987.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408424564|emb|CCJ11951.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408426553|emb|CCJ13916.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408428541|emb|CCJ25706.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408430530|emb|CCJ17845.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408432523|emb|CCJ19808.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408434512|emb|CCJ21772.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408436497|emb|CCJ23740.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|443408203|gb|ELS66731.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443410042|gb|ELS68521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
Length = 644
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|224541292|ref|ZP_03681831.1| hypothetical protein CATMIT_00452 [Catenibacterium mitsuokai DSM
15897]
gi|224525796|gb|EEF94901.1| DNA gyrase, B subunit [Catenibacterium mitsuokai DSM 15897]
Length = 641
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 422/621 (67%), Gaps = 11/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN++DEA AG+ + I V LL + V V DNGRG+P ++
Sbjct: 28 MYIGTTSARGLHHLVWEIVDNSIDEALAGFCNKIRVVLLPGDVVKVIDNGRGMPTGMNVK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K+ +ET+ TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+G Y+Q
Sbjct: 88 TGKNTIETIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVHREGHIYYQ 145
Query: 121 KYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G PV +L V+ ++ GT + F D ++FT +D+ ++ R+RELAFLN
Sbjct: 146 RFENGGTPVGSLK--VVGDCEQEETGTTVVFKADPEIFTETTVYDYGVLSQRLRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
L + L E DP K +EY + GGL EYV +LN +K PLHD ++ ++ I++++
Sbjct: 204 KGLKLVLEDERLDPAK--VDEYHYEGGLREYVAFLNKNKTPLHDHIIDCEDTMNDISVEI 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D Y + + N+I T +GGTH EG + +LTR +N+ K +KDKD SLSG+
Sbjct: 262 AMQY-NDGYQPNIYSFCNNINTHEGGTHEEGFRLALTRVINNYAKSHNFLKDKDESLSGD 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT I+SV+ P+P++EGQTKT+LGN EVRK+V + L ++L +PD I+
Sbjct: 321 DCREGLTAIVSVKHPDPQYEGQTKTKLGNAEVRKIVSTILANALDKFLLENPDTAKIIMD 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K A KA +AAKRAR++ R+K+ L S+LPGKLADCSS P E EIFIVEGDSAGGSAK
Sbjct: 381 KVTLASKARMAAKRAREMTRRKTALDVSNLPGKLADCSSKDPSECEIFIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDR+ QAILPLRGKILNVE+ + N EI+++I A G G+ G++F LRYHKI
Sbjct: 441 SGRDRKIQAILPLRGKILNVEKARLERILGNAEIRSMITAFGTGI-GDEFDINKLRYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG HIR L+LTF YRY K L + G +Y PPLY + GK Y Y D EL
Sbjct: 500 VIMTDADVDGGHIRILMLTFLYRYLKPLIENGYVYAAQPPLYLLRHGKDDHYLYSDYELD 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+K NA Y+IQR+KGLGEM P QLWETT+NPE R+L ++ ++DA +A+ +F LMG
Sbjct: 560 KLKEELGPNAKYTIQRYKGLGEMNPEQLWETTMNPENRVLNRIQLDDAMQADQLFDMLMG 619
Query: 599 ARVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 620 ERVEPRRDFIRENAKYVENLD 640
>gi|218131840|ref|ZP_03460644.1| hypothetical protein BACEGG_03461 [Bacteroides eggerthii DSM 20697]
gi|317474545|ref|ZP_07933819.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
gi|217986143|gb|EEC52482.1| DNA gyrase, B subunit [Bacteroides eggerthii DSM 20697]
gi|316909226|gb|EFV30906.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
Length = 653
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/629 (47%), Positives = 428/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISIKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P+ + V V + GTR +FWPD +FT + ++++ +A R+RELA+LN
Sbjct: 151 EYECGHPLYS----VKEVGVTEITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L E Y + F GL+E+V+++++ ++ L +DV+ + G ++
Sbjct: 206 GIKITLTDLRVKEEDGNYKQEIFYSVEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + +SG
Sbjct: 266 VAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKESKMIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRNRTFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY K+II+TDADVDG+HI TL++T F+RY + +G +Y+ PPLY +GK +YC+
Sbjct: 505 LRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGYLYIATPPLYLCTKGKVKEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA
Sbjct: 565 TDQQRQKFIDTYGGGSENAIHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ FS LMG V R++ I+ A N+D
Sbjct: 624 DYTFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|320159847|ref|YP_004173071.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
gi|319993700|dbj|BAJ62471.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
Length = 639
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 309/622 (49%), Positives = 427/622 (68%), Gaps = 16/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MY+G T + LHHLVYE++DN++DEA AG +I+V + D+SV+V DNGRGIP+D+HP
Sbjct: 29 MYVGGTDLKALHHLVYEVVDNSIDEALAGACDHIQVTIHPDSSVTVEDNGRGIPVDIHPE 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFG S Y VSGGLHGVG+S VNALSE EV V RDG + Q
Sbjct: 89 KQKSALEVVMTVLHAGGKFGSGS--YKVSGGLHGVGVSAVNALSEWCEVEVRRDGKVHFQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PV + V+ + GT+ F D +F + + +T+ R RE+AF+
Sbjct: 147 RYERGVPVEPV--KVIGKCKPNETGTKTTFRFDPTIFKGDLDYKFDTLVQRFREMAFVTR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
K+TI L E + E + ++F GG+ +V++LN +++ LH VV K+V+G+ I+ A+
Sbjct: 205 KVTIRLIDERASREMS----FYFEGGITSFVRYLNRNREVLHPVVYAEKEVEGVGIEAAI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +DAY++++ +AN+I TIDGGTH+ G++A++TR +N +++ +KD D + SG+
Sbjct: 261 QY-TDAYAESVYSFANTINTIDGGTHLTGLRAAITRVINDYARRNNFLKDGDPNFSGDDT 319
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT I+SV+ P+P+FE QTK +L NPEV+ V Q V E + +LE +P +I+ K
Sbjct: 320 REGLTAIVSVKHPDPQFESQTKVKLMNPEVQTYVQQVVGEAFSTFLEENPQAAKAIIQKC 379
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L++ +A AA++ARDLV +KS L S +LPGKLADCS P ++E++IVEGDSAGGSAKQG
Sbjct: 380 LTSARARDAARKARDLVIRKSTLESLTLPGKLADCSERDPSKTELYIVEGDSAGGSAKQG 439
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQA+LPLRGKILN ER + N E++ LI ALG G+ G+ F LRY ++II
Sbjct: 440 RDRHFQAVLPLRGKILNTERARLDKILSNNEVKALISALGTGI-GDSFDLSGLRYGRVII 498
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDG+HIRTLLLTFF+RY L ++G +++ PPLY++ QV+Y Y DA+ ++
Sbjct: 499 MTDADVDGSHIRTLLLTFFFRYMLPLIEDGHLFIAQPPLYRIAYKNQVRYAYTDADRDRI 558
Query: 541 KSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
P A SIQR+KGLGEM P QLWETT+NPE R L + +EDAA A+ F LM
Sbjct: 559 LKELGITPEKA--SIQRYKGLGEMNPTQLWETTMNPENRTLLMVTVEDAAAADRTFDMLM 616
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
GA V R + IQ +A ++ NLD
Sbjct: 617 GAAVPPRTKFIQTHARDVRNLD 638
>gi|284023042|ref|ZP_06377440.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 132]
Length = 644
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQVLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|418953131|ref|ZP_13505137.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|418984497|ref|ZP_13532192.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
gi|375375648|gb|EHS79218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|377710096|gb|EHT34348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
Length = 640
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 204 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 263 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 322 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 382 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 561 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|160941457|ref|ZP_02088792.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
gi|158435603|gb|EDP13370.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
Length = 637
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 427/622 (68%), Gaps = 14/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V + DNS++V D+GRGIP+D+
Sbjct: 25 MYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDVTINEDNSITVMDDGRGIPVDIQKK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E V T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q
Sbjct: 85 AGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYKDGNIYQQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK T ++ ++ GTR+ F PDK++F + +D++T+ R+RE AFL
Sbjct: 143 RYERGK--VTYPLKIVGKCGPEQHGTRVTFLPDKEIFEETV-YDYDTLKIRLRETAFLTK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I L K+D D +K + + + GG++E+V +LN K P++D V + + +G+ ++++
Sbjct: 200 NLKIIL-KDDRDEKKEKV--FHYEGGIKEFVTYLNKGKTPIYDQVIYCEGTREGVYVEVS 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q +D+Y++ + + N+I T +GGTH+ G K +LT+T N ++ K +KD + +LSGE
Sbjct: 257 MQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYAREKKLLKDSEDNLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ +P+FEGQTK +LGN E R VD V E LT +LE +P V S+ K
Sbjct: 316 IREGLTAIISVKIEDPQFEGQTKQKLGNSEARAAVDNIVSEQLTYFLEQNPAVAKSMCEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK
Sbjct: 376 SILAQRARAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKT 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R R QAILPLRGKILNVE+ +Y N EI+ +I A G G+ +DF LRYHKII
Sbjct: 436 ARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-DDFDISKLRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K+V Y Y D EL
Sbjct: 495 IMTDADVDGAHISTLLLTFIYRFMPELIKQGYVYLAQPPLYKVEKNKKVWYAYSDDELNS 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLM 597
+ + IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LM
Sbjct: 555 ILKEIGRDNSNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDEETTSEVDLTFTTLM 614
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E I+ NA + NLD
Sbjct: 615 GDQVEPRREFIEANAKKVKNLD 636
>gi|329954160|ref|ZP_08295255.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
gi|328528137|gb|EGF55117.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
Length = 653
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/629 (47%), Positives = 428/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISIKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN
Sbjct: 151 EYECGHPLYS----VKEVGTTDITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L E Y + F GL+E+V+++++ ++ L +DV+ + G ++
Sbjct: 206 GIKITLTDLRVKEEDGSYKQEIFYSVEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + +SG
Sbjct: 266 VAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKESKMIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+ +
Sbjct: 445 KQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDSEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY K+II+TDADVDG+HI TL++T F+RY + +G +Y+ PPLY +GK +YC+
Sbjct: 505 LRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGYLYIATPPLYLCTKGKVKEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ FS LMG V R++ I+ A N+D
Sbjct: 624 DYTFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|49482258|ref|YP_039482.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
gi|49240387|emb|CAG39033.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
Length = 643
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 33 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 93 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 151 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 207 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 266 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 325 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 385 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 445 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 504 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 563
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 564 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 623
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 624 VVENRRQFIEDNAVYANLD 642
>gi|221141520|ref|ZP_03566013.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|257424201|ref|ZP_05600630.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426878|ref|ZP_05603280.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429514|ref|ZP_05605901.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432161|ref|ZP_05608524.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435122|ref|ZP_05611173.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|258423233|ref|ZP_05686125.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|282907052|ref|ZP_06314900.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910031|ref|ZP_06317839.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912279|ref|ZP_06320075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282912919|ref|ZP_06320711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282922547|ref|ZP_06330237.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|283959489|ref|ZP_06376930.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293511562|ref|ZP_06670256.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|293550171|ref|ZP_06672843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|295429302|ref|ZP_06821924.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589196|ref|ZP_06947837.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|304379953|ref|ZP_07362682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|384860687|ref|YP_005743407.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384866349|ref|YP_005746545.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
TCH60]
gi|384868593|ref|YP_005751307.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|387141643|ref|YP_005730036.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|415683078|ref|ZP_11448344.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|417888971|ref|ZP_12533071.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|417890994|ref|ZP_12535061.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|418281330|ref|ZP_12894143.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|418281879|ref|ZP_12894677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|418307216|ref|ZP_12918941.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|418559586|ref|ZP_13124125.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|418565294|ref|ZP_13129704.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|418580682|ref|ZP_13144768.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|418601048|ref|ZP_13164494.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|418872309|ref|ZP_13426653.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|418887938|ref|ZP_13442077.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|418890522|ref|ZP_13444647.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896380|ref|ZP_13450457.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418899314|ref|ZP_13453378.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|418907689|ref|ZP_13461707.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|418915846|ref|ZP_13469811.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|418921590|ref|ZP_13475514.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|418947149|ref|ZP_13499537.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|418981974|ref|ZP_13529684.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|418992735|ref|ZP_13540377.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|424786730|ref|ZP_18213514.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
gi|59797755|sp|Q6GKU0.3|GYRB_STAAR RecName: Full=DNA gyrase subunit B
gi|257273219|gb|EEV05321.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276509|gb|EEV07960.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279995|gb|EEV10582.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283040|gb|EEV13172.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285718|gb|EEV15834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|257846562|gb|EEV70584.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|269939531|emb|CBI47889.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|282314768|gb|EFB45154.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|282323019|gb|EFB53338.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282323975|gb|EFB54291.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326097|gb|EFB56402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329951|gb|EFB59472.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|283789081|gb|EFC27908.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919218|gb|EFD96294.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|291465520|gb|EFF08052.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|295127061|gb|EFG56705.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577707|gb|EFH96420.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|302749916|gb|ADL64093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304341533|gb|EFM07443.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312436854|gb|ADQ75925.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH60]
gi|315195231|gb|EFU25619.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|329312728|gb|AEB87141.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|341852861|gb|EGS93744.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|341853903|gb|EGS94782.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|365165431|gb|EHM57218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|365172167|gb|EHM62897.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|365245785|gb|EHM86389.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|371974449|gb|EHO91781.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|371974764|gb|EHO92081.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|374400039|gb|EHQ71162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|375367363|gb|EHS71326.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|375376834|gb|EHS80348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|377705406|gb|EHT29711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708099|gb|EHT32391.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|377713874|gb|EHT38082.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|377735389|gb|EHT59422.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|377737693|gb|EHT61703.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|377748742|gb|EHT72698.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|377753673|gb|EHT77590.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|377756551|gb|EHT80448.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|377760519|gb|EHT84398.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|377763107|gb|EHT86964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|421955106|gb|EKU07449.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
Length = 644
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|404477339|ref|YP_006708769.1| DNA gyrase subunit B [Staphylococcus aureus 08BA02176]
gi|404438828|gb|AFR72021.1| DNA gyrase subunit B [Staphylococcus aureus 08BA02176]
Length = 640
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 30 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 148 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGDIFTETTVYNYETLQQRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 204 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 263 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 322 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 382 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 442 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 561 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 620
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 621 VVENRRQFIEDNAVYANLD 639
>gi|416840825|ref|ZP_11903999.1| DNA gyrase subunit B [Staphylococcus aureus O11]
gi|323439694|gb|EGA97412.1| DNA gyrase subunit B [Staphylococcus aureus O11]
Length = 644
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 426/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEYRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|167764147|ref|ZP_02436274.1| hypothetical protein BACSTE_02530 [Bacteroides stercoris ATCC
43183]
gi|167698263|gb|EDS14842.1| DNA gyrase, B subunit [Bacteroides stercoris ATCC 43183]
Length = 653
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/629 (47%), Positives = 428/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISSKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P+ + V V + GTR +FWPD +FT + + ++ +A R+RELA+LN
Sbjct: 151 EYECGHPLYS----VKEVGTTAITGTRQQFWPDATIFTETV-YSYDILATRMRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L E Y + ++ GL+E+V+++++ ++ L +DV+ + G ++
Sbjct: 206 GIKITLTDLRVKEEDGSYKQEVFYSVEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + +SG
Sbjct: 266 VAIMYNT-SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKEAKMIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSA
Sbjct: 385 DKVILAAQARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EA 472
KQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ +
Sbjct: 445 KQGRNRTFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY K+II+TDADVDG+HI TL++T F+RY + +G +Y+ PPLY +GK +YC+
Sbjct: 505 LRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQQGYLYIATPPLYLCTKGKVKEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA
Sbjct: 565 TDQQRQKFIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ FS LMG V R++ I+ A N+D
Sbjct: 624 DYTFSMLMGEDVGPRRDFIEKNATYANID 652
>gi|53711588|ref|YP_097580.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60679839|ref|YP_209983.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|265764971|ref|ZP_06093246.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|336407776|ref|ZP_08588272.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|375356678|ref|YP_005109450.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|383116590|ref|ZP_09937338.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|423248251|ref|ZP_17229267.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|423253200|ref|ZP_17234131.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|423259366|ref|ZP_17240289.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|423263662|ref|ZP_17242665.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|423269860|ref|ZP_17248832.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|423272686|ref|ZP_17251633.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|423282448|ref|ZP_17261333.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
gi|52214453|dbj|BAD47046.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60491273|emb|CAH06021.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|251948137|gb|EES88419.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|263254355|gb|EEZ25789.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|301161359|emb|CBW20899.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|335944855|gb|EGN06672.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|387776946|gb|EIK39046.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|392657100|gb|EIY50737.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|392660358|gb|EIY53972.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|392700706|gb|EIY93868.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|392707084|gb|EIZ00204.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|392708600|gb|EIZ01706.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|404582016|gb|EKA86711.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
Length = 652
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/628 (48%), Positives = 424/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V V D GT+ +FWPD +FT I +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYP----VKEVGIADHTGTKQQFWPDDSIFTETI-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L R+ ++ ++ ++ GL E+V+++ + ++ L +DV+ + I I+
Sbjct: 206 GLRISLTDRRVVNEDGSFKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLNYYLEEHPKEAKAIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A L
Sbjct: 445 KQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|386727827|ref|YP_006194210.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
gi|387601296|ref|YP_005732817.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|418309629|ref|ZP_12921181.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|418980540|ref|ZP_13528319.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|283469234|emb|CAQ48445.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|365238435|gb|EHM79271.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|379991710|gb|EIA13176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|384229120|gb|AFH68367.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
Length = 644
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGDIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|345016457|ref|YP_004818810.1| DNA topoisomerase IV subunit B [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031800|gb|AEM77526.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 633
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/621 (50%), Positives = 431/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 27 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 87 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVIVKQHGKIYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + GT I F PDK++F + FD++ +A R+RELAFLN
Sbjct: 145 IYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFEETV-FDYDVLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E E+ + + GG+ +V++LN +K+ LH+ + K+ D +++
Sbjct: 200 GINIKLIDERHGKEE----VFNYEGGIISFVKYLNRNKEVLHEEPIYMEAKNSD-YEVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD + +L GE
Sbjct: 255 CMQY-NDSYTENIFSFANNIDTREGGTHLVGFKAALTKVINDYARKYGIIKDNEKNLQGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+
Sbjct: 314 DVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVENVVTEKLSAFLEENPSVAKVIVE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ A +A AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK
Sbjct: 374 KATQAARAREAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+ +I ALG GV G DF LRYHKI
Sbjct: 434 SGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGV-GNDFDISKLRYHKI 492
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL
Sbjct: 493 VIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDRELD 552
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 553 KILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMG 611
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 612 DKVEPRREFIEKYAKTVRNLD 632
>gi|384548928|ref|YP_005738180.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302331777|gb|ADL21970.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 644
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNEKKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|393782285|ref|ZP_10370470.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
gi|392673556|gb|EIY67015.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
Length = 655
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/628 (48%), Positives = 423/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 36 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 96 EQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMVTQVYRNGKVYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V V + GTR +FWPD +FT + + + +AGR+RELA+LN
Sbjct: 154 EYEIGKPLYP----VKEVGVSEHTGTRQQFWPDNTIFTETV-YKYEILAGRMRELAYLNA 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L + ++ Q+ + F GL+E+V++L + + L +DV+ + GI I+
Sbjct: 209 GIKITLTDRRTVNDEGQFKQEVFYSEEGLKEFVRYLESSRDHLINDVIYLNTEKQGIPIE 268
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+++ Y N+I TI+GGTH+ G + +LTRTL + SK ++ + ++G
Sbjct: 269 VAIMYNT-GFSESIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEIAG 327
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+
Sbjct: 328 DDFREGLTGVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKEAKQIV 387
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS + E+F+VEGDSAGG+A
Sbjct: 388 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDATKCELFLVEGDSAGGTA 447
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A L
Sbjct: 448 KQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKL 507
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 508 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCWT 567
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ IE+AAEA+
Sbjct: 568 DAQRQKFIDTYGGGSENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIENAAEAD 626
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I++ A N+D
Sbjct: 627 YIFSMLMGEDVGPRREFIEDNATYANID 654
>gi|352516178|ref|YP_004885495.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
gi|348600285|dbj|BAK93331.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
Length = 649
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 428/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A+ I+V + DNS++V DNGRGIP+D+
Sbjct: 35 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIQVIVEKDNSITVTDNGRGIPVDIQNK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGKFGG S LHGVG SVVNALS+ LEV V+++G Y+Q
Sbjct: 95 TGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVVNALSKKLEVKVYKNGQIYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK +T + + + QGT + F PD ++F ++F + +A RIRELAFLN
Sbjct: 153 EFHRGK----VTGDLKVIGETELQGTEVHFEPDSEIFNETVEFSFDKLATRIRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I++ ED PE+ Y + GG++ YV+ LN K L + + I ++++
Sbjct: 209 GLHISI--EDRRPEEPVVKNYHYEGGIKSYVEHLNASKDVLFPEPIYLEGQQQDINVEVS 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y ++ +AN+I T +GGTH G K +LTR +N G K K +K+ D +LSGE
Sbjct: 267 IQY-TDSYHTNLMTFANNIHTYEGGTHEAGFKTALTRVINDYGHKQKLMKENDDNLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV+ P+P+FEGQTKT+LGN EVR V D+ E+ ++L +P + I+ K
Sbjct: 326 VREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFAKFLMENPSIGRRIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA AAKRAR++ R+K L S+LPGKLADCSS PE+SE+FIVEGDSAGGSAKQ
Sbjct: 386 GMLASKARQAAKRAREVTRRKGALEISNLPGKLADCSSRDPEKSELFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GE+F RYHK++
Sbjct: 446 GRSREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEEFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC----YDDA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK ++Y + +
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPLYGVKQGKNIRYVQPGEHAEE 564
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL++V S P + S+QR+KGLGEM QLW+TT+NPE R++ ++ IEDA EA+ VF
Sbjct: 565 ELQEVIDSLPQSPKPSVQRYKGLGEMDEHQLWQTTMNPENRLMLRVSIEDAIEADQVFEM 624
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG V+ R+ I+ A+ V NLD
Sbjct: 625 LMGDHVEPRRAFIEENAHYVQNLD 648
>gi|227498783|ref|ZP_03928923.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|352683418|ref|YP_004895401.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
gi|226904235|gb|EEH90153.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|350278071|gb|AEQ21261.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
Length = 648
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/624 (50%), Positives = 431/624 (69%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGS RGLHHLVYE++DN++DEA AGY +I V + DNS++V DNGRGIP+++H
Sbjct: 40 MYIGSISARGLHHLVYEVIDNSIDEALAGYCDHILVEIGEDNSITVVDNGRGIPVEMHK- 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E V+T+LHAGGKFG GY VSGGLHGVG+S VNALS +EV V +DG Y
Sbjct: 99 IGKPAIEVVMTILHAGGKFG--DGGYKVSGGLHGVGVSCVNALSRRMEVEVKKDGKIYGI 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+GK V L D+KD GT + FWPD +FT + + + T+ RIRELAFLN
Sbjct: 157 EFSKGKTVRPLYVKG-ECDAKD-TGTSVHFWPDDTIFTETV-YSYETLKHRIRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L+ + S ++ + + GG+ +V+++N K+ + + V G R+D +
Sbjct: 214 GVKIELKDDRSGADEI----FHYEGGIISFVEYINKGKEAIFNTPIYVEGERQDT---IV 266
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ +DAY++ + + N+I T +GGTH+ G+K +LTR++N +K+ +KD + +LS
Sbjct: 267 EVAMQY-TDAYTENIYTFVNNINTEEGGTHLAGLKQALTRSINDYARKNGLLKDSEENLS 325
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLTC++S++V P+FEGQTKT+LGN EVR +VD V + L EY E + I
Sbjct: 326 GDDVREGLTCVLSLKVREPQFEGQTKTKLGNSEVRGIVDNMVSDALNEYFEENAPTAKKI 385
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ + +A AA++ARDL R+KS L SSLPGKLADCSS EE+EI+IVEGDSAGGS
Sbjct: 386 VEKAILSSRARAAARKARDLTRRKSALEVSSLPGKLADCSSKNAEETEIYIVEGDSAGGS 445
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ M N EI+++I A G G+ G++F +RY
Sbjct: 446 AKQGRDRAFQAILPLRGKILNVEKARLDKMLNNNEIRSMITAFGCGI-GDEFDLSKIRYG 504
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY + L G +++ PPLY + GK Y Y D E
Sbjct: 505 KIIIMTDADVDGAHIRTLLLTFFYRYMQPLIRNGNVFIAQPPLYLIRTGKNHTYAYSDDE 564
Query: 537 L-KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L KK+ N Y +QR+KGLGEM P QLWETT++P +R + Q+ +EDAA A+ VFS
Sbjct: 565 LQKKLDEVGRQNNPY-VQRYKGLGEMNPEQLWETTMDPSKRTVLQVHLEDAASADSVFSV 623
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R++ I +NA + NLD
Sbjct: 624 LMGDKVEPRRQFIEENAGKVTNLD 647
>gi|167036441|ref|YP_001664019.1| DNA gyrase subunit B [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256751447|ref|ZP_05492325.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|320114866|ref|YP_004185025.1| DNA topoisomerase IV subunit B [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855275|gb|ABY93683.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749666|gb|EEU62692.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|319927957|gb|ADV78642.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 633
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/621 (50%), Positives = 435/621 (70%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 27 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 87 VRKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVIVKQHGKIYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P T L + GT I F PDK++F + FD++ +A R+RELAFLN
Sbjct: 145 RYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFEETV-FDYDVLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++
Sbjct: 200 GINIKLIDE-RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNSD-YEVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD + +L GE
Sbjct: 255 CMQY-NDSYTENIFSFANNIDTREGGTHLVGFKAALTKVINDYARKYGIIKDNEKNLQGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+
Sbjct: 314 DVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVENVVTEKLSAFLEENPSVAKVIVE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ A +A AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK
Sbjct: 374 KATQAARAREAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK+
Sbjct: 434 SGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKV 492
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL
Sbjct: 493 VIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDRELD 552
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 553 RILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMG 611
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 612 DKVEPRREFIEKHAKTVRNLD 632
>gi|218283252|ref|ZP_03489313.1| hypothetical protein EUBIFOR_01902 [Eubacterium biforme DSM 3989]
gi|218216007|gb|EEC89545.1| hypothetical protein EUBIFOR_01902 [Eubacterium biforme DSM 3989]
Length = 655
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/622 (49%), Positives = 423/622 (68%), Gaps = 16/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN +DEA AG+A+ I+V + DN ++V DNGRG+P+ +H
Sbjct: 47 MYIGSTSARGLHHLVWEIVDNGIDEALAGFANRIDVTIEPDNIIAVRDNGRGMPVGIHEK 106
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SA+ET++TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEVTV++DG Y
Sbjct: 107 TGISAVETIMTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVTVFQDGKIYFI 164
Query: 121 KYSR-GKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G V L + GT +RF D Q+F +D+ + R+R+LAFLN
Sbjct: 165 RFENGGHAVEPLKV----IGETTETGTLVRFKADSQIFKDTTVYDYEILNSRLRQLAFLN 220
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDL 238
+ + L D N+Y + GG+ EYVQ+LN +K + D V + + + DGI ++
Sbjct: 221 KDIRLTLT--DKRTPDGLSNDYKYEGGIIEYVQFLNKNKSTISDKVIYVEGLQDGILAEV 278
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D Y ++ + N+I T +GG H +G + +LTR +N+ K + +K KD +LS +
Sbjct: 279 ALQY-NDGYQSSIYSFCNNIHTHEGGYHEDGFRMALTRCINTYAKNNNMIK-KDETLSQD 336
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
V+EGL IISV+ P+P++EGQTKT+LGN EVRK+V E + + +PD+ +I+
Sbjct: 337 DVKEGLVAIISVKHPDPQYEGQTKTKLGNSEVRKIVSNIAGEQINRFFLENPDIAKAIVE 396
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRS-SSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K+ A KA +AAK+AR+L R+KS L SSLPGKL DCSS E EI+IVEGDSAGGSA
Sbjct: 397 KAEIASKARIAAKKARELTRRKSALDGISSLPGKLTDCSSKDASECEIYIVEGDSAGGSA 456
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRD + QAILPLRGKILNVE+ +++N+EI+++I A G G++ ED LRYHK
Sbjct: 457 KQGRDAKTQAILPLRGKILNVEKARTHRIFENQEIRSMITAFGCGIQ-EDVDVSKLRYHK 515
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TDADVDG+HI TL+LTF YR+ K + + G +Y+ PPLYKV++GK++ Y Y + E+
Sbjct: 516 IVIMTDADVDGSHICTLMLTFLYRFMKPVIEGGYVYIAQPPLYKVQKGKKIAYAYKEQEM 575
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+++ F Y +QR+KGLGEM QLWETT++P R+LK++ I+DA EA+ VF LM
Sbjct: 576 DQLREEFKDG--YKVQRYKGLGEMDAEQLWETTMDPHHRVLKRVTIDDAMEADSVFDMLM 633
Query: 598 GARVDTRKELIQNAANLVNLDH 619
G V+ R+E IQ A NLD+
Sbjct: 634 GEDVEPRREYIQENAVYANLDY 655
>gi|374628575|ref|ZP_09700960.1| DNA gyrase, B subunit [Methanoplanus limicola DSM 2279]
gi|373906688|gb|EHQ34792.1| DNA gyrase, B subunit [Methanoplanus limicola DSM 2279]
Length = 639
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/623 (51%), Positives = 424/623 (68%), Gaps = 15/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPID-LHP 59
MYIGST RGLHHL+YE++DNAVDEA AG +NI V + D S +V+D+GRGIP+D +
Sbjct: 26 MYIGSTDTRGLHHLIYEVVDNAVDEALAGICNNISVTINRDGSCTVSDDGRGIPVDIMDD 85
Query: 60 ATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYH 119
KSALE V+TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L V V RDG +
Sbjct: 86 QEGKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSTFLNVEVHRDGYIHE 143
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+ RG V L+ V S GT+I F PD +F T + FD++ ++ R+RELAFLN
Sbjct: 144 MGFERGLVVNPLSSRVNASSSGPEHGTKITFMPDPLIFET-VTFDYDVLSHRMRELAFLN 202
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD---GITI 236
+ I + E +D E + + + GGL+E+V L + K+ +H V + D + +
Sbjct: 203 SGIRIEIADERNDFE----DVFHYEGGLKEFVNHLISGKEAIHKDVIYLHTFDEPNKVEV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ S AYS+T+L + NS+ T +GGTH+EG+K++LTR +N K + +K L
Sbjct: 259 EVALQYSS-AYSETILTFVNSVNTREGGTHLEGLKSALTRAINKTAKDNNLLKGISTPLR 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGL +IS+++ P+FEGQTK RLGN V+ +VD V + LTEY E +P V+ I
Sbjct: 318 GEDVREGLNTVISIKIAEPQFEGQTKMRLGNSNVKGIVDSLVYQSLTEYFEENPKVIQII 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A KA AA++AR+L R+KS L S LPGKLADCS P +SE++IVEGDSAGGS
Sbjct: 378 VQKALGAAKAREAARKARELARRKSTLESGGLPGKLADCSERDPAKSEVYIVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR R FQAILPLRGKILNVE+ + KN EIQ LI A+G GV GE F E RYH
Sbjct: 438 AKQGRSRLFQAILPLRGKILNVEKASPHKILKNTEIQALISAIGCGV-GESFNVEKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
II++TDADVDGAHI TLLLTFFYRY L ++G IY+ PPLY++ +GK +Y + + E
Sbjct: 497 HIILMTDADVDGAHICTLLLTFFYRYMPDLIEKGYIYIAQPPLYRIAKGKMEKYAFKEEE 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + + + SIQR+KGLGEM QLWETT+NPE R+LKQ+ + DA A+ +FS L
Sbjct: 557 MRAAIAEYGEKGV-SIQRYKGLGEMNAEQLWETTMNPETRVLKQVDVMDATYADEIFSKL 615
Query: 597 MGARVDTRKE-LIQNAANLVNLD 618
MG VD R+E +I++A + NLD
Sbjct: 616 MGDDVDARREFIIRHAKEVTNLD 638
>gi|323703937|ref|ZP_08115567.1| DNA gyrase, B subunit [Desulfotomaculum nigrificans DSM 574]
gi|323531095|gb|EGB21004.1| DNA gyrase, B subunit [Desulfotomaculum nigrificans DSM 574]
Length = 636
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/623 (52%), Positives = 430/623 (69%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + I V + DNSV+V DNGRGIP+DLHP
Sbjct: 28 MYIGSTSSRGLHHLVYEVVDNSIDEALAGFCNRISVVIHKDNSVTVEDNGRGIPVDLHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT+LHAGGKFGG S LHGVG+SVVNALSE LEV + R+G YHQ
Sbjct: 88 VGKPAVEVVLTMLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEKLEVEIKRNGNIYHQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRG PV+ L + GT++ F PD ++F F T+ R+RELA+LN
Sbjct: 146 AYSRGVPVSELKI----IGKSKSTGTKVTFKPDPEIFEETT-FSLETLVQRLRELAYLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I ++ E DP Q + F GG+ ++V+ LN +K+ LH V G ++ I +
Sbjct: 201 GVKITIKDERKDPPVEQ--TFQFDGGIRDFVKHLNRNKQVLHSKPIYVTGEKEQ---IIV 255
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y++ +L +AN+I T+DGGTH G K +LTR +N G+ +K+ D +LS
Sbjct: 256 EIALQY-NDTYNENILSFANNIHTVDGGTHEIGFKTALTRVVNDYGRNHNLLKNSDPNLS 314
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REG T +ISV+V P+FEGQTKT+LGN EVR +VD + L YLE +P V I
Sbjct: 315 GEDIREGATVVISVKVREPQFEGQTKTKLGNSEVRGIVDSIFADGLATYLEENPTVGKRI 374
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+++A +A AA++AR+L R+KS L + SLPGKLADCS P SE+++VEGDSAGGS
Sbjct: 375 IEKAITAARAREAARKARELTRRKSALDTMSLPGKLADCSEKDPSVSELYLVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDRRFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G+DF RYH
Sbjct: 435 AKQGRDRRFQAILPLRGKILNVEKARMDKILANEEIRAMITALGCGI-GQDFDISKARYH 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL++V +GK Y Y D E
Sbjct: 494 KIIIMTDADVDGAHIRTLLLTFFYRHMRPLIEAGYVYIAQPPLFRVRKGKLDSYVYSDHE 553
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L+++ + + +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDA EA+ FS L
Sbjct: 554 LEELLKRVGYDNV-NIQRYKGLGEMNPEQLWETTMDPDTRTVLQVTLEDAIEADATFSML 612
Query: 597 MGARVDTRKELIQ-NAANLVNLD 618
MG RV+ R++ IQ NA + NLD
Sbjct: 613 MGDRVEPRRDFIQENAQYVRNLD 635
>gi|228911333|ref|ZP_04075137.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200]
gi|423362664|ref|ZP_17340164.1| DNA gyrase subunit B [Bacillus cereus VD022]
gi|423565616|ref|ZP_17541891.1| DNA gyrase subunit B [Bacillus cereus MSX-A1]
gi|228848351|gb|EEM93201.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200]
gi|401076938|gb|EJP85283.1| DNA gyrase subunit B [Bacillus cereus VD022]
gi|401193298|gb|EJR00304.1| DNA gyrase subunit B [Bacillus cereus MSX-A1]
Length = 642
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|294508443|ref|YP_003572501.1| DNA gyrase subunit B [Salinibacter ruber M8]
gi|294344771|emb|CBH25549.1| DNA gyrase subunit B [Salinibacter ruber M8]
Length = 698
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/622 (48%), Positives = 422/622 (67%), Gaps = 9/622 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE+LDN++DEA AG+ I V + D SVS+ DNGRGIP+D HPA
Sbjct: 81 MYIGDVGLRGLHHLVYEVLDNSIDEAMAGHCDEIGVEIYEDGSVSIEDNGRGIPVDQHPA 140
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++SALE V+TVLHAGGKF S Y VSGGLHGVG+SVVNAL+ EVTVWRDG + Q
Sbjct: 141 EDRSALEVVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVVNALASRFEVTVWRDGSVWEQ 198
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y G P + V P+++ + GTRIRFWPD +F T +F T++ R+RELAFLN
Sbjct: 199 NYLCGVPEDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT-EFRFETLSDRLRELAFLNA 256
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLA 239
+ I + + E Y G+ +V +L+ + + D + + DG + ++LA
Sbjct: 257 GVRIRVEDHREEDEGLARETYHSEEGIIGFVDYLDEARDSILDETIYIAETDGEVPVELA 316
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y+ +L + N+I T +GGTH+ G + +LTRTL +K+ + D LSG+
Sbjct: 317 MQY-NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTRTLKRYAQKNDMLSDLKFDLSGDD 375
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT ++SV+V P+FEGQTKT+LGN +V+ +V+ + L +LE HPD + I+ K
Sbjct: 376 FREGLTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVESLINTELGRWLEDHPDQAERIIEK 435
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AA++AR+LV++K SLPGKLADCSS PEE E+++VEGDSAGGSAKQ
Sbjct: 436 VIQAAEARAAARKARELVQRKDAFSGGSLPGKLADCSSRDPEEGELYLVEGDSAGGSAKQ 495
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHK 477
RDR FQAILPLRGKILNVE+ + ++++IQN++ ALG G+ E+F +RYHK
Sbjct: 496 ARDRHFQAILPLRGKILNVEKARLDRILEHDQIQNIVTALGTGLTSTEEEFNMNEMRYHK 555
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+++TDADVDGAHIR+LLLTFFYR + L ++G IY+ +PPLY+++ G Q YC+ D E+
Sbjct: 556 IVMMTDADVDGAHIRSLLLTFFYRQLRPLIEKGNIYIALPPLYRIQNGSQEIYCWSDEEM 615
Query: 538 KKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ + ++ S+QR+KGLGEM P QLW TT+NPE R ++Q+ I+DAA A+ +FS+L
Sbjct: 616 QTRMAELRADGNSPSMQRYKGLGEMNPEQLWTTTMNPETRKIQQVTIQDAAAADRLFSTL 675
Query: 597 MGARVDTRKELIQNAANLVNLD 618
MG V+ R+E I+ A +D
Sbjct: 676 MGDSVEPRREFIERNAKYATID 697
>gi|448311928|ref|ZP_21501681.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
gi|445603549|gb|ELY57511.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
Length = 643
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 305/615 (49%), Positives = 423/615 (68%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I V + D+SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDITVTIHEDDSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YERPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGSVHRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V +++ + GT++RFWPD +F T F +T++ R+RELAFLN
Sbjct: 145 AFEGGEPVGDMQ-EVREMNADEETGTQVRFWPDTSIFETE-GFSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR +E++D + Y + GG+ E+V++LN + +HD V+ F + I I+
Sbjct: 203 GVRITLRDEREETDDGDVVEDTYEYEGGIREFVKYLNETRSAMHDDVIYFEDEAQNIQIE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N K + + D + +L G
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAKDNDMLGDLETNLKG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+
Sbjct: 322 EDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAQAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA AA++A +L R+KS L S+SLPGKLADC + PE +E+FI EGDSAGGSA
Sbjct: 382 TKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPETAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ RD FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 442 KQARDPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + D E
Sbjct: 501 IIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDTER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ + +QRFKGLGEM P QLWETT+NP+ R+LKQ+ +EDAA A+ +FS LM
Sbjct: 561 DEIVAEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITVEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I+ A
Sbjct: 621 GDAVEPRKQFIKENA 635
>gi|75761791|ref|ZP_00741726.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74490724|gb|EAO54005.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 645
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 36 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 96 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 154 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 209
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 210 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 265 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 324 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 384 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 444 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 502
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 503 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 562
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 563 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 622
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 623 GDKVEPRRNFIQENAKYVKNLD 644
>gi|423613637|ref|ZP_17589497.1| DNA gyrase subunit B [Bacillus cereus VD107]
gi|401241702|gb|EJR48089.1| DNA gyrase subunit B [Bacillus cereus VD107]
Length = 642
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 429/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + DR GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGETDRTGTITRFKPDPEIFQETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VSLQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEYGYIYIAQPPLFKVQQGKKIQYAYNDREL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P++ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|118445175|ref|YP_879293.1| DNA gyrase subunit B [Clostridium novyi NT]
gi|118135631|gb|ABK62675.1| DNA gyrase, B subunit [Clostridium novyi NT]
Length = 637
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/621 (51%), Positives = 437/621 (70%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+TG RGLHHLVYEI+DN++DEA AG+ NIEV + DN ++V D+GRG+P+ +HP
Sbjct: 27 MYIGTTGIRGLHHLVYEIVDNSIDEALAGFCQNIEVLIHKDNCITVKDDGRGMPVGIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++TVLHAGGKFGG S LHGVG SVVNALS+ V V RDG + Q
Sbjct: 87 MKKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSKECNVEVRRDGHIWSQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +GK V+ LT V D GT + F PD ++F ++FD++T+A R+RELAFLN
Sbjct: 145 NYKKGKVVSELTI----VGDTDEHGTSVYFKPDDEIFE-EVEFDYSTLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L E E+ +E+ + GG++ +V +LN +K+ LH + + + D +++
Sbjct: 200 GIKIILVDEREGNERR--DEFHYEGGIKSFVSFLNRNKQTLHAEPIYVEGNKDDYLVEVG 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR LN ++ +K+ D +LSG+
Sbjct: 258 LQY-NDTYNENIFSFANNIDTVEGGTHLAGFKTALTRVLNDYARRYGFLKENDKNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E ++ +LE +PD ++ K
Sbjct: 317 TREGLTAVISVKLTDPQFEGQTKTKLGNTEVRGIVDSIVSERVSIFLEENPDTAKIVIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL+A +A AAK+AR+L R+KSVL S+SLPGKLADCSS P E EI++VEGDSAGGSAKQ
Sbjct: 377 SLTAARAREAAKKARELTRRKSVLESTSLPGKLADCSSKDPSECEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE++ + +++I+ +I A G G+ G+DF E +RYH+II
Sbjct: 437 GRDRRFQAILPLRGKIMNVEKQRLDKILNSDQIRAMITAFGAGI-GKDFDIEKIRYHRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTFFYRY + L D G +Y+ PPLY+V++GK V Y Y D EL++
Sbjct: 496 IMTDADVDGAHIATLLLTFFYRYMRELVDGGHVYIAQPPLYQVKKGKSVNYAYSDNELQE 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + + IQR+KGLGEM QLW+TT+NPE R L ++ I+DA A+ VF+ LMG
Sbjct: 556 VLAQIGGKDKNTEIQRYKGLGEMDAGQLWDTTMNPEHRTLVKVTIDDAMRADEVFTILMG 615
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+E I +NA +VNLD
Sbjct: 616 DKVEPRREFIEENAKKVVNLD 636
>gi|448329984|ref|ZP_21519278.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
gi|445613172|gb|ELY66882.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
Length = 643
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 305/615 (49%), Positives = 426/615 (69%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V R+G +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAKVKRNGAVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT+IRFWPD +F T + +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RVRDMEPDEETGTQIRFWPDTGIFETG-EISFSTLSNRLRELAFLNS 202
Query: 181 KLTIALRKE--DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I LR E D+D ++ Y + GG+ E+V++LN + +H D++ F + I I+
Sbjct: 203 GVRITLRDERVDTDDDEPVAETYEYDGGIREFVEYLNETRSAMHEDIIYFEDEEQNIQIE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +LSG
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLSDLDNNLSG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+
Sbjct: 322 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAQAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KA +AAK+A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSA
Sbjct: 382 MKAVEAAKARMAAKKAEELTRRKSALDSTSLPGKLADCQTKEPEEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 442 KQARNPEFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DQIVEEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 621 GDAVEPRKQFIKDHA 635
>gi|325856512|ref|ZP_08172201.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|327313062|ref|YP_004328499.1| DNA gyrase subunit B [Prevotella denticola F0289]
gi|325483481|gb|EGC86454.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|326945170|gb|AEA21055.1| DNA gyrase, B subunit [Prevotella denticola F0289]
Length = 657
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 308/634 (48%), Positives = 429/634 (67%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV + DNSV+V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTINEDNSVTVEDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V ++ GTR +FWPD +FTT + F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETEKTGTRQQFWPDAGIFTTTV-FQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + GI I+
Sbjct: 204 GIRITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQGIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKAYADSDPQISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+
Sbjct: 323 EIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEDEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY D + L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTDQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|218895146|ref|YP_002443557.1| DNA gyrase subunit B [Bacillus cereus G9842]
gi|228905437|ref|ZP_04069392.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222]
gi|228968646|ref|ZP_04129629.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402562898|ref|YP_006605622.1| DNA gyrase subunit B [Bacillus thuringiensis HD-771]
gi|434378653|ref|YP_006613297.1| DNA gyrase subunit B [Bacillus thuringiensis HD-789]
gi|218542098|gb|ACK94492.1| DNA gyrase, B subunit [Bacillus cereus G9842]
gi|228791075|gb|EEM38693.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228854257|gb|EEM98960.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222]
gi|401791550|gb|AFQ17589.1| DNA gyrase subunit B [Bacillus thuringiensis HD-771]
gi|401877210|gb|AFQ29377.1| DNA gyrase subunit B [Bacillus thuringiensis HD-789]
Length = 640
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|228994212|ref|ZP_04154112.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442]
gi|228765664|gb|EEM14318.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442]
Length = 640
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 425/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + D GT RF PD ++F ++D +T+A R+RELAFLN
Sbjct: 149 KYERGIPAADLKV----IGETDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + + E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++
Sbjct: 205 NIKLII---EDKRENKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVS 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE
Sbjct: 262 LQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K
Sbjct: 321 VREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 381 GTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+I
Sbjct: 441 GRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNDKELEK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P++ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 560 ILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 620 KVEPRRNFIQENAKYVKNLD 639
>gi|302872928|ref|YP_003841561.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|307687881|ref|ZP_07630327.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|302575785|gb|ADL49797.1| DNA gyrase, B subunit [Clostridium cellulovorans 743B]
Length = 636
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/624 (50%), Positives = 437/624 (70%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ NI+V + DNS+SV D+GRG+P+ +H
Sbjct: 28 MYIGSTSSRGLHHLVYEIVDNSIDEALAGFCKNIDVIIHEDNSISVKDDGRGMPVGMHAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N+ A+E ++T+LHAGGKFGG S LHGVG SVVNALSE+ VTV DG + Q
Sbjct: 88 MNRPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSETCIVTVSIDGKIHRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG T L + + GT + F PD ++F T ++FD++T+ R+RELAFLN
Sbjct: 146 EFHRGNVATELEV----IGETEEHGTEVFFTPDHEIFET-LEFDYDTLVQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I++ D ++ + + + GG++ +V +LN +K+ L + G + D I +
Sbjct: 201 GINISI----EDRRNDKSDSFHYDGGIKSFVSYLNRNKEALFPEPIYIEGIQND---ILV 253
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D Y + + +AN+I T +GGTH+ G K ++TR +N +K +K+ D +LS
Sbjct: 254 EIALQY-NDTYQENIFSFANNIDTAEGGTHLAGFKNAMTRVINDYARKFGFLKENDKNLS 312
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT IISV++P PEFEGQTKT+LGN EVR +VD + ++ +LE +P V I
Sbjct: 313 GEDVREGLTAIISVKIPEPEFEGQTKTKLGNSEVRGIVDSILGGSVSTFLEENPSVGKII 372
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L+A +A AAK+AR+L R+KS+L S+SLPGKLADCSS P E EI+IVEGDSAGGS
Sbjct: 373 VDKALTASRAREAAKKARELTRRKSILESTSLPGKLADCSSKDPSECEIYIVEGDSAGGS 432
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR+RRFQAILPLRGKI+NVE++ + ++ I+++I A G G+ G+DF + LRYH
Sbjct: 433 AKQGRNRRFQAILPLRGKIMNVEKQRLDKILGSDTIRSMITAFGAGI-GKDFDLDKLRYH 491
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYKV R K+ Y Y+D E
Sbjct: 492 RIIIMTDADVDGAHIRTLLLTFFYRYMRDMIEKGHVYIAQPPLYKVSRNKKEWYAYNDDE 551
Query: 537 LKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
LK + K + IQR+KGLGEM QLW+TT++PE R+L ++ + +A A+ +F+
Sbjct: 552 LKDILKDIGGKDNSTVIQRYKGLGEMDAQQLWDTTMDPEHRLLLKVDMGEAMMADEIFTI 611
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+VNLD
Sbjct: 612 LMGEKVEPRREFIQENAKNVVNLD 635
>gi|403068971|ref|ZP_10910303.1| DNA gyrase subunit B [Oceanobacillus sp. Ndiop]
Length = 641
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/619 (50%), Positives = 424/619 (68%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY +I+V + DNS++V DNGRGIP+D+
Sbjct: 33 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYCDHIQVIIEKDNSITVKDNGRGIPVDIQKK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + ALE ++TVLHAGGK GY VSGGLHGVG SVVNALS +LEV V R+ Y
Sbjct: 93 TGRPALEVIMTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSSNLEVYVHRNEKVYFL 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++G P+ + V D GT F PD ++FT ++ T+ R+RELAFLN
Sbjct: 151 GFAKGVPLGEIEV----VGETDITGTVTHFTPDPEIFTETTDYNFETLEQRLRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
LTI + + +D E Y ++ GG+ YV+++N +K+ LH+ + GI +++A+
Sbjct: 207 GLTITIEDKRTDREPVTY---YYEGGVSSYVEYINKNKEVLHEPFYAEGEDKGIAVEVAI 263
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D +S + +AN+I T +GG H G ++ LTR +N +K+ +K+ + +LSG+ V
Sbjct: 264 QY-NDGFSSNLFSFANNIHTYEGGAHEVGFRSGLTRVINDYARKNNLIKENETNLSGDDV 322
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+T I+SV+ P+P+FEGQTKT+LGN EVR + D E +++L +P I+ K
Sbjct: 323 REGMTAIVSVKHPDPQFEGQTKTKLGNSEVRTITDSVFSELFSKFLYENPTTARIIVDKG 382
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A LAAK+AR+L R+KS L SSLPGKLADCSS SE++IVEG+SAGGSAK G
Sbjct: 383 LMASRARLAAKKARELTRRKSALEISSLPGKLADCSSKDATISELYIVEGNSAGGSAKSG 442
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N EI+++I ALG GV G+DF RYHKI+I
Sbjct: 443 RDRHFQAILPLRGKILNVEKARLDRILSNAEIRSMITALGTGV-GDDFDISKARYHKIVI 501
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFF+RY + L D G IY+ PPL++V++GK VQY YDD EL +V
Sbjct: 502 MTDADVDGAHIRTLLLTFFFRYMRPLIDNGYIYIAQPPLFQVKQGKSVQYVYDDKELTRV 561
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ P+ +IQR+KGLGEM QLWETT++PE+R L Q+ + DA EA+ VF LMG +
Sbjct: 562 LAEVPATPKPAIQRYKGLGEMDAEQLWETTMDPEKRTLLQVELSDAIEADQVFDMLMGDK 621
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R+ I +NA + NLD
Sbjct: 622 VEPRRNYIEENAKYVQNLD 640
>gi|302344968|ref|YP_003813321.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
gi|302149978|gb|ADK96240.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
Length = 657
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 305/634 (48%), Positives = 431/634 (67%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV + DNS++V D+GRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEVTINEDNSITVEDDGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD ++FTT + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETDKTGTRQQFWPDPEIFTTTV-YQWAIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + I I+
Sbjct: 204 GIKITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKTYADNDPQISKQLEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+
Sbjct: 323 EIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVN 562
Query: 529 QYCYDDAELKKVKSSFPSNA----LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + + + + + A QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQAFIDKYANGAEDAKAIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|377832540|ref|ZP_09815498.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
gi|377553732|gb|EHT15453.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
Length = 650
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/620 (50%), Positives = 412/620 (66%), Gaps = 10/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN +DEA AG+ I V + DNS++V DNGRGIP+D+
Sbjct: 38 MYIGSTSAQGLHHLVWEIVDNGIDEALAGFCDEINVVVEPDNSITVTDNGRGIPVDIQKE 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALETV TVLHAGGKFG S GY VSGGLHGVG SVVNALS L+V V R G EY+
Sbjct: 98 TGKPALETVFTVLHAGGKFG--SGGYKVSGGLHGVGASVVNALSTELDVYVTRQGKEYYM 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G T + V S+ + GTR+ F PD ++F ++ T+ RIREL+FLN
Sbjct: 156 DFDHGHVKTPMKV-VKEGVSELKHGTRVHFKPDPEIFRETTVYNIKTLTDRIRELSFLNK 214
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLA 239
L I + ED EK E+ + GG+ YV++LN ++ L D + + D GIT++++
Sbjct: 215 GLKITI--EDKREEKPTRQEFHYEGGIRHYVEFLNEGQEVLFDPPIYVEGEDKGITVEVS 272
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ + Y T++ + N+I T +GGTH G K +LTR +N G+KS +K + +LSG+
Sbjct: 273 LQYTT-GYRSTLMTFTNNIHTYEGGTHETGFKTALTRVINDYGRKSGQLKG-NTTLSGDD 330
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN + R D E +L +PD I+ K
Sbjct: 331 VREGLTAVVSIKHPDPQFEGQTKTKLGNSDARTATDHIFSEMFARFLMENPDTAHKIVEK 390
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S LPGKLAD +S PE SE+FIVEGDSAGGSAKQ
Sbjct: 391 GMLASKARVAAKRAREVTRKKSGLEISRLPGKLADNTSKDPEISELFIVEGDSAGGSAKQ 450
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R QAILP+RGKILNVE+ + N+EI++L ALG G G DF YHK+I
Sbjct: 451 GRSRLTQAILPIRGKILNVEKAGMDRILANDEIRSLFTALGTGFGG-DFDITKANYHKLI 509
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY K + G +Y+ PPLY+V +GK V+Y D EL+
Sbjct: 510 IMTDADVDGAHIRTLLLTLFYRYMKPMITNGYVYIAQPPLYQVRQGKFVKYVESDEELQN 569
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V ++ + IQR+KGLGEM QLWETT++PE+R L ++ ++DAAEA +F LMG
Sbjct: 570 VLNTLQPSPKPVIQRYKGLGEMDAEQLWETTMDPEKRHLLRVDLDDAAEAEKIFPMLMGT 629
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V R+E I+ A V NLD
Sbjct: 630 KVGPRREFIEENAKFVENLD 649
>gi|320527132|ref|ZP_08028319.1| DNA gyrase, B subunit [Solobacterium moorei F0204]
gi|320132460|gb|EFW25003.1| DNA gyrase, B subunit [Solobacterium moorei F0204]
Length = 664
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/625 (49%), Positives = 418/625 (66%), Gaps = 19/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYI ST +GLHHLV+EI+DN +DEA AGYAS + V + DN ++V D+GRG+P +H
Sbjct: 51 MYIASTSSKGLHHLVWEIVDNGIDEAMAGYASTVTVTVDKDNIITVEDDGRGMPTGIHEK 110
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ET+ TVLHAGGKFGG + Y VSGGLHGVG SVVNALS LEVTV+ DG EY+
Sbjct: 111 TGKSTIETIFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSSWLEVTVFHDGKEYYI 168
Query: 121 KYSRG-KPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIREL 175
++ G PV TL TC D+ G+ +RF D +FT + ++H+ + R+R+L
Sbjct: 169 RFENGGHPVGTLIEKGTC------PADKHGSTVRFKADPTIFTETVAYEHDILRDRLRQL 222
Query: 176 AFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
AFLN + + + E ++ + F GGL++Y ++LN ++ + H+++ I
Sbjct: 223 AFLNKSICLKFNDLREEDEAKRHYVFKFDGGLKQYTEFLNRNRDVVNHEIIYSEGYESNI 282
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A Q+ +D Y+ + + N+I T +GGTH EG + +L R +N + + +K+KD +
Sbjct: 283 QVEVACQY-NDGYNPNIYTFCNNINTAEGGTHEEGFRLALNRVINKYARDTGFLKEKDDN 341
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L+ + REGLT +ISV+ P+P++EGQTKT+LGN EVRK+V L YL +PD
Sbjct: 342 LTTDDCREGLTAVISVKHPDPQYEGQTKTKLGNSEVRKIVSDIFGTQLERYLMENPDEAK 401
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
IL K A +A +AAK+AR+L R+KS L S LPGKLADCSS EI+IVEG SAG
Sbjct: 402 VILEKVALASQARMAAKKARELTRRKSALEVSPLPGKLADCSSKDASICEIYIVEGQSAG 461
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRD FQAILPLRGKILNVE+ ++ +Y+N EI+++I A G GV E E LR
Sbjct: 462 GSAKQGRDSHFQAILPLRGKILNVEKARQSRIYENAEIRSMITAFGCGVSDE-IDLEKLR 520
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YHKI+I+TDADVDGAHIRTLLLTFFYRY + L ++G IY+ PPLYKV++G+ V+Y Y D
Sbjct: 521 YHKIVIMTDADVDGAHIRTLLLTFFYRYLRPLLEQGYIYIAQPPLYKVQKGQTVRYAYTD 580
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+L++VK SIQR+KGLGEM P QLWETT++P+ R L ++ + DA A+ F+
Sbjct: 581 NQLEEVKRELGDR--LSIQRYKGLGEMNPEQLWETTMDPKNRTLIRVAVGDAEAADYNFT 638
Query: 595 SLMGARVDTRKELI-QNAANLVNLD 618
LMG V+ RK I +NA NLD
Sbjct: 639 MLMGEEVEPRKNFIVENAHFAENLD 663
>gi|229164444|ref|ZP_04292372.1| DNA gyrase subunit B [Bacillus cereus R309803]
gi|228619049|gb|EEK75947.1| DNA gyrase subunit B [Bacillus cereus R309803]
Length = 640
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|83816748|ref|YP_446507.1| DNA gyrase subunit B [Salinibacter ruber DSM 13855]
gi|83758142|gb|ABC46255.1| DNA gyrase, B subunit [Salinibacter ruber DSM 13855]
Length = 652
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/625 (48%), Positives = 426/625 (68%), Gaps = 15/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE+LDN++DEA AG+ I V + D SVS+ DNGRGIP+D HPA
Sbjct: 35 MYIGDVGLRGLHHLVYEVLDNSIDEAMAGHCDEIGVEIYEDGSVSIEDNGRGIPVDQHPA 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++SALE V+TVLHAGGKF S Y VSGGLHGVG+SVVNAL+ EVTVWRDG + Q
Sbjct: 95 EDRSALEVVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVVNALASRFEVTVWRDGSVWEQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y G P + V P+++ + GTRIRFWPD +F T +F T++ R+RELAFLN
Sbjct: 153 NYLCGVPEDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT-EFRFETLSDRLRELAFLNA 210
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITI 236
+ I + R+ED + Y+ G+ +V +L+ + + D + + DG + +
Sbjct: 211 GVRIRVEDHREEDKGLARETYHS---EEGIIGFVDYLDEARDSILDETIYIAETDGEVPV 267
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+LA+Q+ +D Y+ +L + N+I T +GGTH+ G + +LTRTL +K+ + D LS
Sbjct: 268 ELAMQY-NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTRTLKRYAQKNDMLSDLKFDLS 326
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT ++SV+V P+FEGQTKT+LGN +V+ +V+ + L +LE HPD + I
Sbjct: 327 GDDFREGLTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVESLINTELGRWLEDHPDQAERI 386
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A AA++AR+LV++K SLPGKLADCSS PEE E+++VEGDSAGGS
Sbjct: 387 IEKVIQAAEARAAARKARELVQRKDAFSGGSLPGKLADCSSRDPEEGELYLVEGDSAGGS 446
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALR 474
AKQ RDR FQAILPLRGKILNVE+ + ++++IQN++ ALG G+ E+F +R
Sbjct: 447 AKQARDRHFQAILPLRGKILNVEKARLDRILEHDQIQNIVTALGTGLTSTEEEFNMNEMR 506
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YHKI+++TDADVDGAHIR+LLLTFFYR + L ++G IY+ +PPLY+++ G Q YC+ D
Sbjct: 507 YHKIVMMTDADVDGAHIRSLLLTFFYRQLRPLIEKGNIYIALPPLYRIQNGSQEIYCWSD 566
Query: 535 AELKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
E++ + ++ S+QR+KGLGEM P QLW TT+NPE R ++Q+ I+DAA A+ +F
Sbjct: 567 EEMQTRMAELRADGNSPSMQRYKGLGEMNPEQLWTTTMNPETRKIQQVTIQDAAAADRLF 626
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S+LMG V+ R+E I+ A +D
Sbjct: 627 STLMGDSVEPRREFIERNAKYATID 651
>gi|293370455|ref|ZP_06617008.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
gi|292634447|gb|EFF52983.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
Length = 652
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/628 (48%), Positives = 426/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA A Y +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALASYCDHIEVTINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTADITGTRQQFWPDGTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L R+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRISLTDRRVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQVIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|228942642|ref|ZP_04105174.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228975572|ref|ZP_04136124.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228982208|ref|ZP_04142497.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|410672382|ref|YP_006924753.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|423376715|ref|ZP_17353999.1| DNA gyrase subunit B [Bacillus cereus BAG1O-2]
gi|423386975|ref|ZP_17364230.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-2]
gi|423439810|ref|ZP_17416716.1| DNA gyrase subunit B [Bacillus cereus BAG4X2-1]
gi|423450029|ref|ZP_17426908.1| DNA gyrase subunit B [Bacillus cereus BAG5O-1]
gi|423462881|ref|ZP_17439649.1| DNA gyrase subunit B [Bacillus cereus BAG6O-1]
gi|423526693|ref|ZP_17503138.1| DNA gyrase subunit B [Bacillus cereus HuB1-1]
gi|423532238|ref|ZP_17508656.1| DNA gyrase subunit B [Bacillus cereus HuB2-9]
gi|423542492|ref|ZP_17518882.1| DNA gyrase subunit B [Bacillus cereus HuB4-10]
gi|423548723|ref|ZP_17525081.1| DNA gyrase subunit B [Bacillus cereus HuB5-5]
gi|423618807|ref|ZP_17594640.1| DNA gyrase subunit B [Bacillus cereus VD115]
gi|423621470|ref|ZP_17597248.1| DNA gyrase subunit B [Bacillus cereus VD148]
gi|228777560|gb|EEM25838.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|228784182|gb|EEM32209.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817068|gb|EEM63161.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|401127327|gb|EJQ35054.1| DNA gyrase subunit B [Bacillus cereus BAG5O-1]
gi|401168739|gb|EJQ75998.1| DNA gyrase subunit B [Bacillus cereus HuB4-10]
gi|401174840|gb|EJQ82047.1| DNA gyrase subunit B [Bacillus cereus HuB5-5]
gi|401252283|gb|EJR58544.1| DNA gyrase subunit B [Bacillus cereus VD115]
gi|401263225|gb|EJR69354.1| DNA gyrase subunit B [Bacillus cereus VD148]
gi|401630827|gb|EJS48625.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-2]
gi|401640960|gb|EJS58685.1| DNA gyrase subunit B [Bacillus cereus BAG1O-2]
gi|402421442|gb|EJV53695.1| DNA gyrase subunit B [Bacillus cereus BAG4X2-1]
gi|402422690|gb|EJV54918.1| DNA gyrase subunit B [Bacillus cereus BAG6O-1]
gi|402454565|gb|EJV86355.1| DNA gyrase subunit B [Bacillus cereus HuB1-1]
gi|402465099|gb|EJV96783.1| DNA gyrase subunit B [Bacillus cereus HuB2-9]
gi|409171511|gb|AFV15816.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
Length = 642
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|218961619|ref|YP_001741394.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans]
gi|167730276|emb|CAO81188.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 632
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 302/621 (48%), Positives = 426/621 (68%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T RGLHHLVYE++DN++DEA AGY I + + ++ V DNGRGIP+D+
Sbjct: 26 MYIGGTSERGLHHLVYEVIDNSIDEALAGYCDEIICTITTEGNIRVEDNGRGIPVDIQKD 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A++ VLTVLHAGGKF S Y V+GGLHGVG+SVVNALSE LEV +++DG EY
Sbjct: 86 MGVPAVQVVLTVLHAGGKFDDKS--YKVAGGLHGVGVSVVNALSEFLEVNIFKDGKEYFM 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
++ RG PVT L + ++ GT + F PD +F TT FD+ + R+RELAFLN
Sbjct: 144 RFERGLPVTELQV----LGDTNKTGTVVTFRPDPLIFETTEFSFDY--LTSRLRELAFLN 197
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDL 238
L I L+ E S + +++ + GG++ +V++LN +KKPL + V +G+ ++
Sbjct: 198 SGLRIILKDERS----GRVHDFKYEGGIKSFVEYLNQNKKPLFPNPIYISSVKEGMEFEV 253
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ ++ Y + + +AN+I T +GGTH+ G K+ LTR +N+ K + +K++ +S SGE
Sbjct: 254 ALQY-NEGYQENIFSFANNINTTEGGTHLSGFKSGLTRAVNTYIKNADLLKNEKVSPSGE 312
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT +IS+++ NP+FEGQTKT+L N EV +V+ +V E L EY E HP +I
Sbjct: 313 DIREGLTAVISLKIANPQFEGQTKTKLQNSEVEGIVNSAVYEKLMEYFEEHPAEAKNITM 372
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
KS+ A ++ AA++AR+L R+K+VL S SLPGKLADC+ + PE++E+F+VEGDSAGGSAK
Sbjct: 373 KSILAARSREAARKARELTRRKTVLESGSLPGKLADCTLSDPEKTELFLVEGDSAGGSAK 432
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILPL GK+LN E+ + N++IQ +I ALG G+ G++F LRYHKI
Sbjct: 433 QGRDRSFQAILPLWGKMLNTEKARVDKVLNNDKIQPIILALGAGI-GQEFDISKLRYHKI 491
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+ DADVDG+HI TLL+TFFYRY + + +EG +Y+ +PPL++V +GKQ Y Y++ E
Sbjct: 492 IIMADADVDGSHIATLLMTFFYRYMRPVIEEGKLYIAMPPLFQVRKGKQKVYVYNEEERD 551
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K F + +QR+KGLGEM QLWETTL+P+ R + + ++DA EA+ +F+ LMG
Sbjct: 552 KAIREFGEKGVL-VQRYKGLGEMNAEQLWETTLDPKNRKMIAIKMDDAIEADRMFTILMG 610
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
V+ R+E IQ NA + NLD
Sbjct: 611 DEVEPRREFIQENARYVKNLD 631
>gi|229148043|ref|ZP_04276382.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24]
gi|228635468|gb|EEK91959.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24]
Length = 642
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H D V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEDPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|326390355|ref|ZP_08211914.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392940031|ref|ZP_10305675.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
gi|325993632|gb|EGD52065.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392291781|gb|EIW00225.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
Length = 633
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/621 (50%), Positives = 431/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 27 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 87 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVIVKQHGKIYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + GT I F PDK++F + FD++ +A R+RELAFLN
Sbjct: 145 IYERGVPKTDLEVIG----ETEETGTTITFKPDKEIFEETV-FDYDVLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E E+ + + GG+ +V++LN +K+ LH+ + K+ D +++
Sbjct: 200 GINIKLIDERHGKEE----VFNYEGGIISFVKYLNRNKEVLHEEPIYMEAKNSD-YEVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D+Y++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD + +L GE
Sbjct: 255 CMQY-NDSYNENIFSFANNIDTREGGTHLVGFKAALTKVINDYARKYGIIKDNEKNLQGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+
Sbjct: 314 DVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVENVVTEKLSAFLEENPSVAKVIVE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ A +A AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK
Sbjct: 374 KATQAARAREAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+ +I ALG GV G DF LRYHKI
Sbjct: 434 SGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGV-GNDFDISKLRYHKI 492
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG+HIRTLLLTFFYR+ + L + G +++ PPLYK+ +GK+V Y Y D EL
Sbjct: 493 VIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVFIAQPPLYKITKGKKVYYAYSDRELD 552
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 553 KILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMG 611
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 612 DKVEPRREFIEKYAKTVRNLD 632
>gi|359409915|ref|ZP_09202380.1| DNA gyrase, B subunit [Clostridium sp. DL-VIII]
gi|357168799|gb|EHI96973.1| DNA gyrase, B subunit [Clostridium sp. DL-VIII]
Length = 635
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/621 (52%), Positives = 435/621 (70%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST PRGLHHLVYEI+DN++DEA AGY IEV + DNS++V D+GRG+P+ +HP
Sbjct: 28 MYIGSTSPRGLHHLVYEIVDNSIDEALAGYCKKIEVYINEDNSITVTDDGRGMPVGIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E ++T+LHAGGKFGG S LHGVG SVVNALSE VTV RDG + Q
Sbjct: 88 MGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEECTVTVKRDGHIWEQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYS+GK +T +T + + D GT F PD +F I FD ++ R+RELAFLN
Sbjct: 146 KYSKGKVLTEVT----QIGNSDETGTETYFKPDAGIFD-EIVFDFEVLSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I L D EK + + + GG++ +V +LN +K PLHD + + V D I +++A
Sbjct: 201 GIYIKLV--DKRDEKEEI--FHYEGGIKSFVSYLNRNKVPLHDEPIYIEGVKDNIAVEVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+
Sbjct: 257 LQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTRVFNDYAKKFGHIKENDKNFTGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV++ P+FEGQTKT+LGN EVR +VD V E + +LE +P++ I+ K
Sbjct: 316 IREGLTAVISVKIEEPQFEGQTKTKLGNSEVRGIVDSVVGENVGTFLEENPNIGKMIVDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R KSVL ++LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 376 ALMAARARDAARKARELTR-KSVLERTTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGKILNVE++ + + I+++I A G G+ G DF E +RY++II
Sbjct: 435 GRNRRFQAILPLRGKILNVEKQRLDRILNADTIRSMITAFGAGI-GNDFAVEKIRYNRII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D+G +Y+ PPLYKV +GK+ Y Y DAEL+
Sbjct: 494 IMTDADVDGAHIRTLLLTFFYRYMRELIDDGHVYIAQPPLYKVSKGKKEHYAYSDAELES 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V S F + IQR+KGLGEM QLW+TT++PE+R+L ++ I+DA A+ +F+ LMG
Sbjct: 554 VLSDFGGKDNSTDIQRYKGLGEMNANQLWDTTMDPEKRILLKVNIDDAMAADEIFTILMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ RKE I QNA +VNLD
Sbjct: 614 EKVEPRKEFIQQNAKKVVNLD 634
>gi|317495092|ref|ZP_07953463.1| DNA gyrase, subunit B [Gemella morbillorum M424]
gi|316914799|gb|EFV36274.1| DNA gyrase, subunit B [Gemella morbillorum M424]
Length = 643
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 305/619 (49%), Positives = 430/619 (69%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGY + I VA+ DN + V DNGRGIPID+
Sbjct: 35 MYIGSTSSRGLHHLVWEIVDNSIDEALAGYCNTITVAIEKDNWIRVEDNGRGIPIDIQEQ 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALE +LTVLHAGGKFGG S LHGVG SVVNALS +LE V RDG +
Sbjct: 95 TGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEAYVHRDGKIHSM 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG+ V +T + D+ GT +RF D ++F ++++ + RIRELAFLN
Sbjct: 153 KFERGEVVQGITV----IGETDKTGTTVRFKADPEIFQETTVYEYDILRSRIRELAFLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI L+ E + EK + ++ + GGL EYV+ LN +K LH+ + +++G +++++
Sbjct: 209 GITIVLKDERENQEKEE--DFCYEGGLLEYVEMLNENKDALHEAIYVHGEMEGKEVEISM 266
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ + YS +L YAN+I T +GGTH G K +LTR +N+ GKK+K +K+K+ +L+G+ V
Sbjct: 267 QYNT-GYSSNILSYANNINTHEGGTHESGFKTALTRIINAYGKKNKLIKEKE-TLTGDDV 324
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P V I+ K
Sbjct: 325 REGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKVAKIIVEKG 384
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK G
Sbjct: 385 LQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLG 444
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RD +FQAILPL+GKILNVE+ + ++EI++LI A+G+G+ GE + LRYHKI+I
Sbjct: 445 RDSKFQAILPLKGKILNVEKVRIDKVLSSDEIRSLITAVGMGI-GETLNMDKLRYHKIVI 503
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDG+HIRTLLLTFF+RY + L D G +Y+ PPLY ++ GK+ YC+ + ELK+
Sbjct: 504 MTDADVDGSHIRTLLLTFFFRYMRELIDAGYVYIARPPLYGLKVGKKEYYCHTEEELKQH 563
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
F + Y++QR+KGLGEM +LW+TT++P+ R++ Q+ I DA A+ F +LMG +
Sbjct: 564 IEEFAGDKKYAVQRYKGLGEMNAEELWDTTMDPKHRLMYQVSIGDAQRADAAFDTLMGEK 623
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R++ I +NA N++NLD
Sbjct: 624 VEPRRKFIEENALNVINLD 642
>gi|363894897|ref|ZP_09321945.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
gi|361961139|gb|EHL14363.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
Length = 641
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 308/624 (49%), Positives = 435/624 (69%), Gaps = 20/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AG+ I V++ +N ++V DNGRGIP+++HP
Sbjct: 31 MYIGSTGSKGLHHLVYEVVDNAIDEALAGFCDKIYVSIDVNNGITVIDNGRGIPVEVHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V +DG Y Q
Sbjct: 91 TGKSTLETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKDGKVYKQ 148
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
++ G VT + TC + + GT I F PD+++F + + T+ R+RELA
Sbjct: 149 EFEYGNAVTDIKQIGTCPL------EETGTCISFLPDEKIFDETV-YSFETLEHRLRELA 201
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-T 235
FLN ++I L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG
Sbjct: 202 FLNKGISITL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYD 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
I++A+Q+ +DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD +
Sbjct: 260 IEIAMQY-TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENF 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE +REGLT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P
Sbjct: 319 TGEDIREGLTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARI 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K + + +A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGG
Sbjct: 379 IMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK+GR+ + QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRY
Sbjct: 439 SAKEGRNSQNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII++DADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y
Sbjct: 498 HKIIIMSDADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSPE 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL++ + + + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ +FS
Sbjct: 558 ELEQKLNEIGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADEIFSV 616
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ IQ A V NLD
Sbjct: 617 LMGDKVEPRRDFIQQNARYVENLD 640
>gi|448373987|ref|ZP_21557872.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
gi|445660664|gb|ELZ13459.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
Length = 643
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 426/615 (69%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AG+ +I V + D SVSV D+GRGIP+D+H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNAIDEALAGHCEDITVTIHEDGSVSVVDDGRGIPVDIHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTV RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVTVTRDGGIYEH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG+P + V D+ + GT IRFWPD Q+F T ++F + T++ R+RELAFLN
Sbjct: 145 GFDRGEPDGEME-QVGEPDASNETGTSIRFWPDDQIFET-LEFSYATLSNRLRELAFLNS 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I LR E + D E E F + GG+ E+V+++N + PLH DVV F + I ++
Sbjct: 203 GVAITLRDEREVDDEGVIVQETFEYDGGIREFVEYINETRSPLHRDVVYFTDEDQSIQVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANENDLLSDLDENLKG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E +PD +I+
Sbjct: 322 EDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDGLATYFEENPDTAQAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KA AAK+A +L R+KS L S++LPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 382 LKAVEAAKARKAAKQAEELTRRKSALDSTALPGKLADCQTRDPDEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ +QAILP++GKILNVE+ + +N+EI+NLI A+G G+ G++F + +RY K
Sbjct: 442 KQARNPDYQAILPIKGKILNVEKHRLDRILENDEIRNLITAIGAGI-GDEFDLDEVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLIEHGYVYATQPPLYRIRYRGETYDAMTDAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ + +QRFKGLGEM P QLW+TT+NPE R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DEIVAEKCDGNPSQVQRFKGLGEMNPEQLWDTTMNPENRILKQVSIEDAAAADRMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I+ A
Sbjct: 621 GDAVEPRKQFIKENA 635
>gi|342218811|ref|ZP_08711414.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
gi|341588758|gb|EGS32133.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
Length = 640
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/621 (51%), Positives = 434/621 (69%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AGY ++IEV + ADNS+ V DNGRGIP+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEVVDNSVDEALAGYCTHIEVNIEADNSIIVKDNGRGIPVAMH-K 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVVNALSE ++ V RDG +
Sbjct: 88 IGKPAVEVVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSEWTKIKVKRDGYLWDI 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG T+L P+ + GT + F PD ++F I +D +T+ R+RELAFLN
Sbjct: 146 SFARGITNTSL-VQERPLLDNEETGTEVHFKPDPEIFPD-IVYDFDTLKTRLRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L ED K++ EY + GGL +V++LNT+K+ +H VV F + + +D+A
Sbjct: 204 GLHITL--EDKRI-KDKKEEYCYKGGLVSFVEFLNTNKENVHPTVVHFEGQKNQVIVDIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + YS+ +L + N I T +GGTH+ G + +LTR +N + +K+ + +LSGE
Sbjct: 261 MQYNT-GYSENILTFVNDIFTEEGGTHLSGFRTALTRLINDYARNMGILKENEENLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV+V P+FEGQTKT+LGN EV+ VVD + L E+ E HP +I++K
Sbjct: 320 VREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGVVDTIFSDGLREFFEEHPVEAKNIINK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++SA +A AA+RAR+L R+K+ L SSLPGKLADCS +EI++VEGDSAGGSAKQ
Sbjct: 380 TISASRARQAARRARELTRRKNALEISSLPGKLADCSEKNSAYTEIYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKI+NVE+ + NEEI+++I A G G+ GE+F RY KII
Sbjct: 440 GRDRKFQAILPLRGKIINVEKARLDKILANEEIRSMITAFGTGI-GEEFDISKRRYDKII 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-K 538
I+TDADVDG+HIRTLLLTFFYR+ K L EG +Y+ PPLY+V +GKQV Y Y D E+ +
Sbjct: 499 IMTDADVDGSHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQVRKGKQVWYFYTDEEMNE 558
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ +QR+KGLGEM P QLWETT++P+ R + ++ +EDA +A+ +FS LMG
Sbjct: 559 KLDELGRDTNNIVVQRYKGLGEMNPEQLWETTMDPQYRTMLKVELEDAIKADRIFSVLMG 618
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R++ IQ NA N+ NLD
Sbjct: 619 DKVEPRRQFIQENAKNVRNLD 639
>gi|145577983|gb|ABP82710.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar sotto]
Length = 632
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIARPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|229014660|ref|ZP_04171774.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048]
gi|229170197|ref|ZP_04297883.1| DNA gyrase subunit B [Bacillus cereus AH621]
gi|423490641|ref|ZP_17467323.1| DNA gyrase subunit B [Bacillus cereus BtB2-4]
gi|423496365|ref|ZP_17473009.1| DNA gyrase subunit B [Bacillus cereus CER057]
gi|423496841|ref|ZP_17473458.1| DNA gyrase subunit B [Bacillus cereus CER074]
gi|423513056|ref|ZP_17489586.1| DNA gyrase subunit B [Bacillus cereus HuA2-1]
gi|423520150|ref|ZP_17496631.1| DNA gyrase subunit B [Bacillus cereus HuA2-4]
gi|423595333|ref|ZP_17571363.1| DNA gyrase subunit B [Bacillus cereus VD048]
gi|423597250|ref|ZP_17573250.1| DNA gyrase subunit B [Bacillus cereus VD078]
gi|423659655|ref|ZP_17634824.1| DNA gyrase subunit B [Bacillus cereus VDM022]
gi|423671041|ref|ZP_17646070.1| DNA gyrase subunit B [Bacillus cereus VDM034]
gi|423672736|ref|ZP_17647675.1| DNA gyrase subunit B [Bacillus cereus VDM062]
gi|228613298|gb|EEK70437.1| DNA gyrase subunit B [Bacillus cereus AH621]
gi|228746671|gb|EEL96560.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048]
gi|401149547|gb|EJQ57018.1| DNA gyrase subunit B [Bacillus cereus CER057]
gi|401156743|gb|EJQ64146.1| DNA gyrase subunit B [Bacillus cereus HuA2-4]
gi|401163261|gb|EJQ70608.1| DNA gyrase subunit B [Bacillus cereus CER074]
gi|401222009|gb|EJR28611.1| DNA gyrase subunit B [Bacillus cereus VD048]
gi|401238782|gb|EJR45214.1| DNA gyrase subunit B [Bacillus cereus VD078]
gi|401294535|gb|EJS00163.1| DNA gyrase subunit B [Bacillus cereus VDM034]
gi|401304283|gb|EJS09840.1| DNA gyrase subunit B [Bacillus cereus VDM022]
gi|401311250|gb|EJS16557.1| DNA gyrase subunit B [Bacillus cereus VDM062]
gi|402428986|gb|EJV61077.1| DNA gyrase subunit B [Bacillus cereus BtB2-4]
gi|402446099|gb|EJV77962.1| DNA gyrase subunit B [Bacillus cereus HuA2-1]
Length = 642
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 151 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|229099920|ref|ZP_04230843.1| DNA gyrase subunit B [Bacillus cereus Rock3-29]
gi|229118983|ref|ZP_04248328.1| DNA gyrase subunit B [Bacillus cereus Rock1-3]
gi|384184093|ref|YP_005569989.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis
CT-43]
gi|407707961|ref|YP_006831546.1| hypothetical protein MC28_4725 [Bacillus thuringiensis MC28]
gi|452196386|ref|YP_007476467.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228664508|gb|EEL20004.1| DNA gyrase subunit B [Bacillus cereus Rock1-3]
gi|228683535|gb|EEL37490.1| DNA gyrase subunit B [Bacillus cereus Rock3-29]
gi|326937802|gb|AEA13698.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis
CT-43]
gi|407385646|gb|AFU16147.1| DNA gyrase subunit B [Bacillus thuringiensis MC28]
gi|452101779|gb|AGF98718.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 640
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|163938018|ref|YP_001642902.1| DNA gyrase subunit B [Bacillus weihenstephanensis KBAB4]
gi|229136319|ref|ZP_04265066.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196]
gi|163860215|gb|ABY41274.1| DNA gyrase, B subunit [Bacillus weihenstephanensis KBAB4]
gi|228647191|gb|EEL03279.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196]
Length = 640
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 149 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|225181142|ref|ZP_03734588.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
gi|225168111|gb|EEG76916.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
Length = 650
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/625 (49%), Positives = 435/625 (69%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+E++DN++DEA AG+ +I + + DN ++V+D+GRGIP+ + P
Sbjct: 35 MYIGSTGARGLHHLVFEVVDNSIDEALAGHCDDIVITIEKDNIITVSDDGRGIPVGIQPQ 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALSE LEV V RDG +
Sbjct: 95 TGRPAVEVVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEWLEVEVHRDGKIHQM 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG V LT + GT+IRF PD +VF T ++F + T++ R+RELAFLN
Sbjct: 153 SFARGAIVKELTV----TGKTKKTGTQIRFKPDAEVFET-VEFSYETLSKRLRELAFLNK 207
Query: 181 KLTIAL---RKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGF--RKDVDGI 234
+ I + R E +D + E F + GG++ +V++LN +K+PLH + ++ D
Sbjct: 208 GIRITVADERTELTDETNEKVKETFKYDGGIKSFVEFLNKNKEPLHKKAIYLEQEKEDCC 267
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++ALQ+ D Y+D +L +AN+I T +GGTH G K++LTR +N +K+ +K+ + +
Sbjct: 268 QVEIALQY-HDGYNDLILSFANNIHTHEGGTHEAGFKSALTRLINDYARKNNLLKENESN 326
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
+SGE +REGLT +ISV++ P+FEGQTKT+LGN E+R +VD + E L YL +P +
Sbjct: 327 VSGEDIREGLTAVISVKLLEPQFEGQTKTKLGNSEMRGIVDSFLYEELGAYLGENPQMAK 386
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
++ KS+SA +A AA++AR+L R+KS L +SLPGKLADC+S P E+++VEGDSAG
Sbjct: 387 RLVEKSVSAARAREAARKARELARRKSALEVTSLPGKLADCASRDPAMCELYLVEGDSAG 446
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDRRFQAILPLRGKI+NVE+ + NEEI+ +I ALG G+ DF R
Sbjct: 447 GSAKQGRDRRFQAILPLRGKIINVEKARLDKILANEEIRTIITALGTGI-STDFDLAKAR 505
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YHKIII+TDADVDG+HIRTLLLTFFYRY + L G +Y+ PPLY V++ ++ Y Y +
Sbjct: 506 YHKIIIMTDADVDGSHIRTLLLTFFYRYMQPLIQAGYVYIAQPPLYLVKKKQKEHYVYTE 565
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+L ++ S+QR+KGLGEM P QLW TT++PE+R + Q+ +EDA A+ +F+
Sbjct: 566 DQLDRLLKEIGREG-NSLQRYKGLGEMNPEQLWSTTMDPEKRTILQVTMEDAIRADDMFT 624
Query: 595 SLMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+ I++ AN V NLD
Sbjct: 625 VLMGDKVEPRRVFIESHANQVRNLD 649
>gi|423416596|ref|ZP_17393685.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-1]
gi|401109980|gb|EJQ17896.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-1]
Length = 642
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGTTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|423369455|ref|ZP_17346886.1| DNA gyrase subunit B [Bacillus cereus VD142]
gi|401077892|gb|EJP86219.1| DNA gyrase subunit B [Bacillus cereus VD142]
Length = 642
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 151 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|145577989|gb|ABP82713.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
gi|145578003|gb|ABP82720.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar vazensis]
gi|145578011|gb|ABP82724.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 142 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|423399670|ref|ZP_17376843.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-2]
gi|423461727|ref|ZP_17438523.1| DNA gyrase subunit B [Bacillus cereus BAG5X2-1]
gi|423479640|ref|ZP_17456355.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-1]
gi|401134960|gb|EJQ42566.1| DNA gyrase subunit B [Bacillus cereus BAG5X2-1]
gi|401657791|gb|EJS75296.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-2]
gi|402425235|gb|EJV57390.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-1]
Length = 642
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|145577999|gb|ABP82718.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar roskildiensis]
Length = 632
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIPI +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPIGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NERYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|52145204|ref|YP_081624.1| DNA gyrase subunit B [Bacillus cereus E33L]
gi|229094604|ref|ZP_04225671.1| DNA gyrase subunit B [Bacillus cereus Rock3-42]
gi|229159054|ref|ZP_04287110.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342]
gi|300118805|ref|ZP_07056525.1| DNA gyrase subunit B [Bacillus cereus SJ1]
gi|51978673|gb|AAU20223.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)
[Bacillus cereus E33L]
gi|228624473|gb|EEK81244.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342]
gi|228688851|gb|EEL42682.1| DNA gyrase subunit B [Bacillus cereus Rock3-42]
gi|298723773|gb|EFI64495.1| DNA gyrase subunit B [Bacillus cereus SJ1]
Length = 640
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|423451258|ref|ZP_17428111.1| DNA gyrase subunit B [Bacillus cereus BAG5X1-1]
gi|423471658|ref|ZP_17448402.1| DNA gyrase subunit B [Bacillus cereus BAG6O-2]
gi|423520670|ref|ZP_17497143.1| DNA gyrase subunit B [Bacillus cereus HuA4-10]
gi|401146266|gb|EJQ53782.1| DNA gyrase subunit B [Bacillus cereus BAG5X1-1]
gi|401179767|gb|EJQ86930.1| DNA gyrase subunit B [Bacillus cereus HuA4-10]
gi|402431469|gb|EJV63537.1| DNA gyrase subunit B [Bacillus cereus BAG6O-2]
Length = 642
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPAADLKV----IGETDRTGTITRFKPDAEIFTETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|379794532|ref|YP_005324530.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356871522|emb|CCE57861.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 644
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/619 (52%), Positives = 425/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNEAIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTIYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D + + + Y + GG++ YV+ LN K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEDNIREDSYHYEGGIKSYVELLNEKKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL+K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELEK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|228995401|ref|ZP_04155073.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17]
gi|229003015|ref|ZP_04160874.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4]
gi|228758243|gb|EEM07429.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4]
gi|228764354|gb|EEM13229.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17]
Length = 640
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 425/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + D GT RF PD ++F ++D +T+A R+RELAFLN
Sbjct: 149 KYERGIPAADLKV----IGETDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + + E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++
Sbjct: 205 NIKLII---EDKRENKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVS 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE
Sbjct: 262 LQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K
Sbjct: 321 VREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 381 GTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+I
Sbjct: 441 GRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNDKELEK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P++ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 560 ILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 620 KVEPRRNFIQENAKYVKNLD 639
>gi|357056605|ref|ZP_09117644.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
gi|355379970|gb|EHG27117.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
Length = 637
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/622 (50%), Positives = 426/622 (68%), Gaps = 14/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V + DNS++V D+GRGIP+D+
Sbjct: 25 MYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDVTINEDNSITVVDDGRGIPVDIQKK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E V T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q
Sbjct: 85 AGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYKDGNIYQQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK T ++ ++ GT++ F PDK++F + +D++T+ R+RE AFL
Sbjct: 143 RYERGK--VTYPLKIVGKCGPEQHGTKVTFLPDKEIFEETV-YDYDTLKIRLRETAFLTK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I L+ D+ EK + + + GG++E+V +LN K P++D V + + +G+ ++++
Sbjct: 200 NLKIILK--DNREEKKE-KVFHYEGGIKEFVTYLNRGKTPIYDQVIYCEGTREGVYVEVS 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q +D+Y++ + + N+I T +GGTH+ G K +LT+T N ++ K +KD + +LSGE
Sbjct: 257 MQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYAREKKLLKDSEDNLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ +P+FEGQTK +LGN E R VD V E LT +LE +P V SI K
Sbjct: 316 IREGLTAIISVKIEDPQFEGQTKQKLGNSEARAAVDNIVSEQLTYFLEQNPAVAKSICEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK
Sbjct: 376 SILAQRARAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKT 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R R QAILPLRGKILNVE+ +Y N EI+ +I A G G+ +DF LRYHKII
Sbjct: 436 ARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-DDFDISKLRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K+V Y Y D EL
Sbjct: 495 IMTDADVDGAHISTLLLTFIYRFMPELIKQGYVYLAQPPLYKVEKNKKVWYAYSDEELNS 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLM 597
+ + IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LM
Sbjct: 555 ILMDIGRDNSNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDEETTSEVDLTFTTLM 614
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E I+ NA + NLD
Sbjct: 615 GDQVEPRREFIEANAKKVKNLD 636
>gi|299147112|ref|ZP_07040179.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
gi|298514997|gb|EFI38879.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
Length = 652
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/628 (48%), Positives = 423/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVIINEDNSITVQDNGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EKKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYS----VKEVGTADITGTRQQFWPDNTIFTETV-YDYKILASRLRELAYLNA 205
Query: 181 KLTIALRKEDSDPEKNQYN--EYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L E + +++ GL E+V+++ + ++ L +DV+ + GI I+
Sbjct: 206 GLRISLTDRRVVNEDGSFKGEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISVKVQEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS + LPGKLADCS + E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDATKCELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGR+R FQAILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+
Sbjct: 565 DAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 YIFSMLMGEDVGPRREFIEENATYANID 651
>gi|225862062|ref|YP_002747440.1| DNA gyrase, B subunit [Bacillus cereus 03BB102]
gi|225788933|gb|ACO29150.1| DNA gyrase, B subunit [Bacillus cereus 03BB102]
Length = 640
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|124485239|ref|YP_001029855.1| DNA gyrase subunit B [Methanocorpusculum labreanum Z]
gi|124362780|gb|ABN06588.1| DNA gyrase subunit B [Methanocorpusculum labreanum Z]
Length = 651
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/640 (50%), Positives = 432/640 (67%), Gaps = 36/640 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I + + + SVSV D+GRGIP+D+ P
Sbjct: 25 MYIGSTDTRGLHHLVYEVVDNSIDEALAGFCKHIVIIINPNGSVSVEDDGRGIPVDIMPK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L V+RDG Y
Sbjct: 85 QNKSALEVVMTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSTRLTAEVYRDGNIYSM 142
Query: 121 KYSRGKPVTTLTC-------HVLPVDSKDRQG--------TRIRFWPDKQVFTTAIQFDH 165
+ +G + LT ++L D++G TRI F+PD +F T +FD+
Sbjct: 143 VFGKGVLLQPLTSRPETDEEYLLRQKRLDKEGQPKETTTGTRITFYPDGSIFETT-EFDY 201
Query: 166 NTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH 222
+ +A R RELA+LN L I + R DSD + + GGL ++V LN K+ LH
Sbjct: 202 DVLAHRFRELAYLNKGLEIHVEDHRTGDSDT-------FCYEGGLRQFVAHLNEGKELLH 254
Query: 223 D---VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLN 279
V DV+ I +++ALQ+ +D Y + + Y NS+ T +GGTH+EG +++LTR +N
Sbjct: 255 PEPIYVDKSDDVNKIEVEVALQY-NDTYGEILYTYVNSVNTREGGTHLEGFRSALTRAIN 313
Query: 280 SLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQ 339
++ +K +K+ D+S+ GE VREGLT +ISV++ NP+FEGQTK RLGN V+ +VD +
Sbjct: 314 NIAHANKHLKE-DVSVRGEDVREGLTAVISVKIANPQFEGQTKMRLGNSNVKGLVDSMMY 372
Query: 340 EYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTT 399
+ LTE+ E +P V+ +I KSL A A AA+RA++L R+K+ L S LPGKLADCS
Sbjct: 373 QALTEFFEENPKVIAAIAKKSLDAANAREAARRAKELARRKTSLEMSGLPGKLADCSERD 432
Query: 400 PEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRAL 459
P +SEI+IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ E KN EIQ LI A+
Sbjct: 433 PAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKALEHKALKNAEIQTLITAI 492
Query: 460 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPL 519
G G G+ F E RYH I+I+TDADVDGAHIR LLLTFFYR+ K L + G IY+ PPL
Sbjct: 493 GAGY-GDKFDAERARYHHIVIMTDADVDGAHIRILLLTFFYRFMKPLVEMGYIYIAQPPL 551
Query: 520 YKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 579
+++ +GKQ +Y Y + +++ + + + S+QR+KGLGEM QLW TT+NPE R+LK
Sbjct: 552 FRIAKGKQEKYVYTEEDMRLAIAEYGEKGI-SVQRYKGLGEMNAGQLWNTTMNPEFRILK 610
Query: 580 QLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 618
Q+ IEDA+ AN +F LMG V RK+ I+ +A + NLD
Sbjct: 611 QVRIEDASYANEIFEKLMGDDVMPRKDFIKRHAGEVKNLD 650
>gi|145578023|gb|ABP82730.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar fukuokaensis]
Length = 632
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/622 (51%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPALPKPGIQRYKGLGEMSPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|448323114|ref|ZP_21512578.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
gi|445600300|gb|ELY54313.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
Length = 643
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/615 (49%), Positives = 421/615 (68%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V + AD+SV+V+D+GRGIP+D H
Sbjct: 27 MYIGSTDARGLHHLVYEVVDNSIDEALAGHCDDITVTINADDSVTVSDDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YERPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGAVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + +D + GT + FWPD VF T F +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RARDMDDDEETGTEVTFWPDTDVFETR-DFSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITID 237
+ I LR E + E + E Y + GG+ E+V++LN + +HD V + +D D I ++
Sbjct: 203 GVRITLRDERQETEDGEVIEETYEYEGGIREFVEYLNETRSVMHDDVIYFEDEDQNIQVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q D ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D D +L+G
Sbjct: 263 VAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYGNENNLLGDIDGNLTG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+
Sbjct: 322 EDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHEQLGTYFEEHPDTAQAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSA
Sbjct: 382 LKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY K
Sbjct: 442 KQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 501 IIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LM
Sbjct: 561 DEIVEEVCDGNPTQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 621 GDAVEPRKQFIKDHA 635
>gi|229035151|ref|ZP_04189097.1| DNA gyrase subunit B [Bacillus cereus AH1271]
gi|228728217|gb|EEL79247.1| DNA gyrase subunit B [Bacillus cereus AH1271]
Length = 640
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 426/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + + E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++A
Sbjct: 205 NIKLII---EDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE
Sbjct: 262 LQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K
Sbjct: 321 VREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 381 GTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+I
Sbjct: 441 GRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 560 ILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 620 KVEPRRNFIQENAKYVKNLD 639
>gi|229065153|ref|ZP_04200446.1| DNA gyrase subunit B [Bacillus cereus AH603]
gi|228716182|gb|EEL67901.1| DNA gyrase subunit B [Bacillus cereus AH603]
Length = 640
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/620 (50%), Positives = 426/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 149 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + + E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++A
Sbjct: 205 NIKLII---EDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE
Sbjct: 262 LQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K
Sbjct: 321 VREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 381 GTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+I
Sbjct: 441 GRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K
Sbjct: 500 IMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 560 ILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 620 KVEPRRNFIQENAKYVKNLD 639
>gi|225386349|ref|ZP_03756113.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
gi|225047531|gb|EEG57777.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
Length = 638
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 423/622 (68%), Gaps = 13/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNAVDEA AGY +IEV + DNS++V D+GRGIP+ +
Sbjct: 25 MYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIEVTINEDNSITVIDDGRGIPVGIQKK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E V T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V+ DG Y Q
Sbjct: 85 AGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYLDGNIYQQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + L ++ GT +RF PDK++F +FD++T+ R+RE AFL
Sbjct: 143 RYERGKVMYPL--KIVGKCEPHEHGTHVRFLPDKEIFEET-EFDYDTLKIRLRETAFLTK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I LR D E+ + + + GG+ E+V +LN K PL++ V + + +G+ ++++
Sbjct: 200 NLKITLR--DDREEEVKEKTFHYEGGIREFVAYLNKGKTPLYEQVIYCEGTREGVYVEVS 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ +D+Y++ + + N+I T +GGTH+ G K +LT+T N +K+K +K+ + SLSGE
Sbjct: 258 LQH-NDSYTEGIYTFVNNINTPEGGTHLTGFKNALTKTFNDYARKNKLLKENEDSLSGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ +P+FEGQTK +LGN E R VD V E LT +LE +P V SI K
Sbjct: 317 IREGLTAIISVKIEDPQFEGQTKQKLGNSEARTAVDNVVSEQLTYFLEQNPSVAKSICEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++ARDL R+KS L +LPGKLADCS P EI+IVEGDSAGGSAK
Sbjct: 377 SILAQRARAAARKARDLTRRKSALDGVALPGKLADCSDKNPVNCEIYIVEGDSAGGSAKT 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R R QAILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKII
Sbjct: 437 ARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-EDFDITKLRYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K++ Y Y D EL
Sbjct: 496 IMTDADVDGAHISTLLLTFLYRFMPELIKQGYVYLAQPPLYKVEKNKRIWYAYSDEELNS 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED--AAEANVVFSSLM 597
+ + + IQR+KGLGEM QLWETT++PE+R+L ++ ++D +E ++ F++LM
Sbjct: 556 ILTDVGRDGNNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDDETQSELDLTFTTLM 615
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E I+ NA + NLD
Sbjct: 616 GDQVEPRREFIESNAKRVQNLD 637
>gi|229015410|ref|ZP_04172416.1| DNA gyrase subunit B [Bacillus cereus AH1273]
gi|229026934|ref|ZP_04183257.1| DNA gyrase subunit B [Bacillus cereus AH1272]
gi|228734392|gb|EEL85063.1| DNA gyrase subunit B [Bacillus cereus AH1272]
gi|228745889|gb|EEL95885.1| DNA gyrase subunit B [Bacillus cereus AH1273]
Length = 640
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGTTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+++ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 ERILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|355674400|ref|ZP_09059585.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
gi|354813963|gb|EHE98566.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
Length = 637
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/622 (49%), Positives = 425/622 (68%), Gaps = 14/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DNAVDEA AGY +I+V + +DNS++V D+GRGIP+D+
Sbjct: 25 MYIGSTSARGLHHLVYEIVDNAVDEALAGYCDSIDVTINSDNSITVVDDGRGIPVDIQKK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E V T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q
Sbjct: 85 AGLPAVEVVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVFKDGNIYQQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK T ++ ++ GT++ F PD ++F ++D++T+ R+RE AFL
Sbjct: 143 RYQRGK--VTYPLKIVGKCGPEQHGTKVTFLPDTEIFEET-EYDYDTLKIRLRETAFLTK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I LR E E+ + + + GG++E+V +LN K PL++ V + + +G+ ++++
Sbjct: 200 NLRITLRDE---REEKKEKTFHYEGGIKEFVTYLNKGKTPLYEQVIYCEGTKEGVFVEVS 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q +D+Y++ + + N+I T +GGTH+ G K +LT+T N +K+K +K+ + SLSGE
Sbjct: 257 MQH-NDSYTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYARKNKLLKENEDSLSGED 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IIS++V P+FEGQTK +LGN E R VD V E LT +LE +P + ++ K
Sbjct: 316 IREGLTAIISIKVAEPQFEGQTKQKLGNSEARTAVDNIVSEQLTYFLEQNPGIAKAMCEK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A +A AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK
Sbjct: 376 SILAQRARAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKT 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R R QAILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKII
Sbjct: 436 ARSRATQAILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-EDFDISKLRYHKII 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TLLLTF YR+ L +G +Y+ PPLYK+E+ K+V Y Y D EL
Sbjct: 495 IMTDADVDGAHISTLLLTFLYRFMPELIKQGYVYLAQPPLYKIEKNKKVWYAYSDDELNS 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLM 597
+ + IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LM
Sbjct: 555 IMMEIGRDTNNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDEETTSEIDLTFTTLM 614
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E I+ NA + NLD
Sbjct: 615 GDQVEPRREFIEANAKRVQNLD 636
>gi|320531090|ref|ZP_08032119.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
gi|320136672|gb|EFW28625.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
Length = 684
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + V + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAVTIHRDNSITVVDNGRGIPVDMH-E 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGHIYEI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG TT H V + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 AFARGN--TTEKLH--EVGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L E + +++ + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLTDERGEELRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKEKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K
Sbjct: 366 VREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPSERTMLRVAAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|423388220|ref|ZP_17365446.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-3]
gi|401643408|gb|EJS61105.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-3]
Length = 642
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGTTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+++ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 ERILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|145578025|gb|ABP82731.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPAADLKV----IGETDRTGTITRFKPDAEIFTETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|145577969|gb|ABP82703.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 424/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + D GT RF PD ++F ++D +T+A R+RELAFLN
Sbjct: 142 KYERGIPAADLKV----IGETDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNR 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + + E Q E+ + GG++ YV+ LN K P+H+ V DGI ++++
Sbjct: 198 NIKLII---EDKRENKQKKEFHYEGGIKSYVEHLNRSKAPIHEEPVYVEGSKDGIQVEVS 254
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE
Sbjct: 255 LQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K
Sbjct: 314 VREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 374 GTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+I
Sbjct: 434 GRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVI 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K
Sbjct: 493 IITDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNDKELEK 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P++ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 553 ILAELPAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGD 612
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ IQ NA + NLD
Sbjct: 613 KVEPRRNFIQENAKYVKNLD 632
>gi|404393691|ref|ZP_09319331.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
gi|404278784|gb|EHL17450.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
Length = 641
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 308/624 (49%), Positives = 435/624 (69%), Gaps = 20/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AG+ I V++ +N ++V DNGRGIP+++HP
Sbjct: 31 MYIGSTGSKGLHHLVYEVVDNAIDEALAGFCDKIYVSIDVNNGITVIDNGRGIPVEVHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V ++G Y Q
Sbjct: 91 TGKSTLETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKEGKIYKQ 148
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
++ G VT + TC + + GT I F PD+++F I + T+ R+RELA
Sbjct: 149 EFEYGNAVTDIKQIGTCPL------EETGTCISFLPDEKIFDETI-YSFETLEHRLRELA 201
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-T 235
FLN ++I L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG
Sbjct: 202 FLNKGISITL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYD 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
I++A+Q+ +DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD +
Sbjct: 260 IEIAMQY-TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENF 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE +REGLT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P
Sbjct: 319 TGEDIREGLTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARI 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K + + +A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGG
Sbjct: 379 IMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK+GR+ + QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRY
Sbjct: 439 SAKEGRNSQNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII++DADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y
Sbjct: 498 HKIIIMSDADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSPE 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL++ + + + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ +FS
Sbjct: 558 ELEQKLNEIGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADEIFSV 616
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ IQ A V NLD
Sbjct: 617 LMGDKVEPRRDFIQQNARYVENLD 640
>gi|313894727|ref|ZP_07828288.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976636|gb|EFR42090.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
Length = 684
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + V + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAVTIHRDNSITVVDNGRGIPVDMH-E 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGHIYEI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG TT H V + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 AFARGN--TTEKLH--EVGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L E + +++ + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLTDERGEELRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKEKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K
Sbjct: 366 VREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPSERTMLRVAAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|293497972|ref|ZP_06665826.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424]
gi|291096903|gb|EFE27161.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424]
Length = 644
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/619 (52%), Positives = 421/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+ +
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVGIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A
Sbjct: 208 GIQITLRDE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K
Sbjct: 326 TREGMTAIISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A +AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMAARARVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+KS +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|228924238|ref|ZP_04087509.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228835456|gb|EEM80826.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 640
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDNEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|206970026|ref|ZP_03230979.1| DNA gyrase, B subunit [Bacillus cereus AH1134]
gi|218232402|ref|YP_002364860.1| DNA gyrase subunit B [Bacillus cereus B4264]
gi|228961757|ref|ZP_04123360.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229072958|ref|ZP_04206154.1| DNA gyrase subunit B [Bacillus cereus F65185]
gi|229112906|ref|ZP_04242437.1| DNA gyrase subunit B [Bacillus cereus Rock1-15]
gi|229130739|ref|ZP_04259692.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4]
gi|229153652|ref|ZP_04281828.1| DNA gyrase subunit B [Bacillus cereus m1550]
gi|229181739|ref|ZP_04309062.1| DNA gyrase subunit B [Bacillus cereus 172560W]
gi|229193744|ref|ZP_04320685.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876]
gi|296500843|ref|YP_003662543.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171]
gi|51988024|dbj|BAD44713.1| gyraseB [Bacillus cereus ATCC 14579]
gi|206734603|gb|EDZ51772.1| DNA gyrase, B subunit [Bacillus cereus AH1134]
gi|218160359|gb|ACK60351.1| DNA gyrase, B subunit [Bacillus cereus B4264]
gi|228589769|gb|EEK47647.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876]
gi|228601772|gb|EEK59270.1| DNA gyrase subunit B [Bacillus cereus 172560W]
gi|228629838|gb|EEK86491.1| DNA gyrase subunit B [Bacillus cereus m1550]
gi|228652756|gb|EEL08641.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4]
gi|228670585|gb|EEL25898.1| DNA gyrase subunit B [Bacillus cereus Rock1-15]
gi|228710204|gb|EEL62182.1| DNA gyrase subunit B [Bacillus cereus F65185]
gi|228797951|gb|EEM44961.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296321895|gb|ADH04823.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171]
Length = 640
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|402304103|ref|ZP_10823182.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
gi|400376029|gb|EJP28922.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
Length = 684
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 426/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + V + DNS++V DNGRGIP+D+H
Sbjct: 77 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDTVAVTIHRDNSITVVDNGRGIPVDMH-E 135
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y
Sbjct: 136 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGHIYEI 193
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG TT H + + + GTR+ F PD ++FT + T+ R+RELAFLN
Sbjct: 194 SFARGN--TTEKLH--EIGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNH 248
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+TI L E + +++ + F GG+ +V LN K+ +++ + F D +++A
Sbjct: 249 GITITLTDERGEELRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIA 306
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE
Sbjct: 307 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKEKDGNLSGED 365
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K
Sbjct: 366 VREGLTAVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDK 425
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQ
Sbjct: 426 ALMASRAREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQ 485
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KII
Sbjct: 486 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKII 544
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 545 IMTDADVDGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAK 604
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG
Sbjct: 605 KLDEIGRDGV-TIQRYKGLGEMNPEQLWETTMNPSERTMLRVAAEDAEAADELFTILMGD 663
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 664 KVEPRRQFIEENARLVRNLD 683
>gi|229051162|ref|ZP_04194706.1| DNA gyrase subunit B [Bacillus cereus AH676]
gi|228722225|gb|EEL73626.1| DNA gyrase subunit B [Bacillus cereus AH676]
Length = 640
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|313900991|ref|ZP_07834481.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|346314835|ref|ZP_08856352.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|373123464|ref|ZP_09537310.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
gi|312954411|gb|EFR36089.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|345905773|gb|EGX75510.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|371660797|gb|EHO26041.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
Length = 647
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/620 (49%), Positives = 437/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+A++IE+ + +N + V DNGRG+P +
Sbjct: 40 MYIGSTSERGLHHLVWEIVDNSIDEALAGFATDIEITIEKNNIIRVEDNGRGMPTGIVEK 99
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ET+ TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEV V ++G E+
Sbjct: 100 TGISGVETIFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVNVHQNGHEFFL 157
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G T + ++ ++ G+ +RF D ++F ++D +T+ RIR+LAFLN
Sbjct: 158 RFEDGGKATG---PLKIINDSEKHGSIVRFKADPEIFQETQEYDFDTLNARIRQLAFLNK 214
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDL 238
+ + L E +++P++ +Y + GG+ +YV++LN +K PLH+ V + + + DGI ++
Sbjct: 215 SIRLVLCDEREAEPKRIEYK---YDGGIRQYVEYLNKNKTPLHEEVVYVEGIEDGILAEI 271
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D Y ++ + N+I T++GGTH +G + +LTR +N+ ++ +K KD +L+G+
Sbjct: 272 AMQY-NDGYIPSIYSFCNNINTMEGGTHEDGFRLALTRIINAYAREQGMIK-KDETLAGD 329
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V + E L + +P+ I+
Sbjct: 330 DVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVSSILGEQLDRFFMENPETAKIIVD 389
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A KA LAAK+AR+L R+KS L +SLPGKLADCSS E EI+IVEGDSAGGSAK
Sbjct: 390 KAILASKARLAAKKARELTRRKSALEITSLPGKLADCSSKDASECEIYIVEGDSAGGSAK 449
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ +FQAILPLRGKILNVE+ +++N EI+++I A G G+ GE+ LRYHKI
Sbjct: 450 QGRNSKFQAILPLRGKILNVEKARLQRIFENNEIRSMITAFGCGI-GEEMDVSKLRYHKI 508
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHI TL+LTFFYRY + + + G +Y+ +PPL+KV +G +V+Y Y + E++
Sbjct: 509 IIMTDADVDGAHICTLMLTFFYRYLRPIIEGGYVYIAMPPLFKVAKGNRVEYVYKEEEVE 568
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V++S N ++QR+KGLGEM P QLWETT++P R LKQ+ I+DA EA+ +F LMG
Sbjct: 569 TVRASMGENV--NVQRYKGLGEMNPEQLWETTMDPAFRTLKQVNIDDAMEADSIFEMLMG 626
Query: 599 ARVDTRKELIQNAANLVNLD 618
V+ R++ IQ A LD
Sbjct: 627 EEVEPRRDFIQENAIYATLD 646
>gi|448317100|ref|ZP_21506658.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
gi|445604524|gb|ELY58471.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
Length = 643
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/615 (49%), Positives = 423/615 (68%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V + AD SV VAD+GRGIP+D H
Sbjct: 27 MYIGSTDARGLHHLVYEVVDNSIDEALAGHCDDITVTIEADGSVLVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT IRFWPD +F T +F +T++ R+RELAFLN
Sbjct: 145 AFEGGEPVGDME-RVRDMEPDEETGTEIRFWPDGDIFETG-EFSFSTLSSRLRELAFLNS 202
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR +E++D Y + GG+ E+V++LN + +HD V+ F + + + ++
Sbjct: 203 GVRITLRDEREETDDGAAVEETYEYEGGIREFVEYLNETRAVMHDDVIYFEGEDENVQVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q D ++ +AN+I T +GGTH+ G K +LTR +N G + + D D +L G
Sbjct: 263 VAMQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYGNERNLLGDVDGNLKG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +ISV+ P+P+FEGQTKT+LGN EVR VV+ ++ E L Y E HPD ++I+
Sbjct: 322 EDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGVVEGAMHEQLGTYFEEHPDTAEAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 382 AKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTRDPDEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY K
Sbjct: 442 KQARNPEFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LM
Sbjct: 561 DEIVEEVCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 621 GDAVEPRKQFIKDHA 635
>gi|423583663|ref|ZP_17559774.1| DNA gyrase subunit B [Bacillus cereus VD014]
gi|423633659|ref|ZP_17609312.1| DNA gyrase subunit B [Bacillus cereus VD156]
gi|401209723|gb|EJR16482.1| DNA gyrase subunit B [Bacillus cereus VD014]
gi|401282726|gb|EJR88624.1| DNA gyrase subunit B [Bacillus cereus VD156]
Length = 642
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDNEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|310777811|ref|YP_003966144.1| DNA gyrase subunit B [Ilyobacter polytropus DSM 2926]
gi|309747134|gb|ADO81796.1| DNA gyrase subunit B [Ilyobacter polytropus DSM 2926]
Length = 634
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/621 (48%), Positives = 426/621 (68%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN+VDE+ AGY + IE+ +L DN + V+DNGRGIP+ +HP
Sbjct: 24 MYIGSTSARGLHHLVWEIVDNSVDESLAGYCNKIEIKVLKDNIIEVSDNGRGIPVGIHPK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF +S Y VSGGLHGVG+SVVNALSE EV V RDG ++Q
Sbjct: 84 HGKSALEIVLTVLHAGGKF--ENSNYKVSGGLHGVGVSVVNALSEWTEVFVKRDGKIHNQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+RG P V V + GT +RF D ++F T +++D + + R++E+A+LN
Sbjct: 142 RYNRGVP----EFDVKVVGKTNETGTTVRFKADSEIFET-LEYDFDVLKSRLKEMAYLNK 196
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I L D E+ + F GG+ ++++ + + L + + + + I +++A
Sbjct: 197 GLEIVLI--DERKEEIKEEILKFDGGIVDFIKEVEEGQATLIPEPIYMAGESEDIIVEIA 254
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + ++ +T+ + N+I T +GGTH+ G + +LTR +N + K +K++D + G+
Sbjct: 255 ILY-TEKQRETIYSFVNNINTHEGGTHVSGFRMALTRIINEMAKSLGLLKERDGNFQGQD 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T IIS++VP P+FEGQTKT+LGN EV VV + ++L ++E HP +I+ +
Sbjct: 314 IREGVTAIISIKVPEPQFEGQTKTKLGNSEVTAVVSSIMGQFLKMHMEDHPSDARNIIER 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L + KA AAK+AR+LV +KS L SLPGKLADCSS PEESE+FIVEGDSAGGSAKQ
Sbjct: 374 ILMSRKAREAAKKARELVMRKSALEVGSLPGKLADCSSKKPEESEVFIVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ +N E+++++ A G + G+D + E LRYHKII
Sbjct: 434 GRDRHTQAILPLRGKIINVEKSGLHKALENNEVRSMVTAFGANI-GDDLELEKLRYHKII 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LTFFYRY L G IY+ PPL+KV G+ +QY Y D +LK+
Sbjct: 493 IMTDADVDGAHIRTLILTFFYRYMVDLIHGGYIYIAQPPLFKVTAGRTIQYAYSDKQLKE 552
Query: 540 VKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + + N Y++QR+KGLGEM P QLWETT+N + R L Q+ I+DA EA+++F LMG
Sbjct: 553 ITTVMDADNKRYTLQRYKGLGEMNPDQLWETTMNHDTRTLLQVTIDDAREADILFDKLMG 612
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+ I+ ++ V NLD
Sbjct: 613 DKVEPRRNFIEEHSHFVKNLD 633
>gi|145577977|gb|ABP82707.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar higo]
gi|145577979|gb|ABP82708.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar kenyae]
gi|145578009|gb|ABP82723.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar azorensis]
gi|145578021|gb|ABP82729.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar zhaodongensis]
Length = 632
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|423394308|ref|ZP_17371509.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-1]
gi|423410273|ref|ZP_17387420.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-3]
gi|401648270|gb|EJS65866.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-3]
gi|401658679|gb|EJS76169.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-1]
Length = 642
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPAADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|30018283|ref|NP_829914.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579]
gi|228955743|ref|ZP_04117738.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|365162547|ref|ZP_09358675.1| DNA gyrase subunit B [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410764|ref|ZP_17387884.1| DNA gyrase subunit B [Bacillus cereus BAG3O-2]
gi|423427579|ref|ZP_17404610.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-2]
gi|423433451|ref|ZP_17410455.1| DNA gyrase subunit B [Bacillus cereus BAG4O-1]
gi|423438891|ref|ZP_17415872.1| DNA gyrase subunit B [Bacillus cereus BAG4X12-1]
gi|423506618|ref|ZP_17483207.1| DNA gyrase subunit B [Bacillus cereus HD73]
gi|423589310|ref|ZP_17565396.1| DNA gyrase subunit B [Bacillus cereus VD045]
gi|423632808|ref|ZP_17608553.1| DNA gyrase subunit B [Bacillus cereus VD154]
gi|423644650|ref|ZP_17620267.1| DNA gyrase subunit B [Bacillus cereus VD166]
gi|423651331|ref|ZP_17626901.1| DNA gyrase subunit B [Bacillus cereus VD169]
gi|423658405|ref|ZP_17633704.1| DNA gyrase subunit B [Bacillus cereus VD200]
gi|449086675|ref|YP_007419116.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|29893823|gb|AAP07115.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579]
gi|228803971|gb|EEM50595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363618080|gb|EHL69436.1| DNA gyrase subunit B [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108918|gb|EJQ16848.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-2]
gi|401109496|gb|EJQ17419.1| DNA gyrase subunit B [Bacillus cereus BAG3O-2]
gi|401111869|gb|EJQ19751.1| DNA gyrase subunit B [Bacillus cereus BAG4O-1]
gi|401116018|gb|EJQ23864.1| DNA gyrase subunit B [Bacillus cereus BAG4X12-1]
gi|401224549|gb|EJR31103.1| DNA gyrase subunit B [Bacillus cereus VD045]
gi|401259454|gb|EJR65630.1| DNA gyrase subunit B [Bacillus cereus VD154]
gi|401270282|gb|EJR76305.1| DNA gyrase subunit B [Bacillus cereus VD166]
gi|401279383|gb|EJR85312.1| DNA gyrase subunit B [Bacillus cereus VD169]
gi|401288135|gb|EJR93897.1| DNA gyrase subunit B [Bacillus cereus VD200]
gi|402447283|gb|EJV79139.1| DNA gyrase subunit B [Bacillus cereus HD73]
gi|449020432|gb|AGE75595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 642
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|422325721|ref|ZP_16406749.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
gi|371667469|gb|EHO32594.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
Length = 647
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/620 (49%), Positives = 437/620 (70%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+A++IE+ + +N + V DNGRG+P +
Sbjct: 40 MYIGSTSERGLHHLVWEIVDNSIDEALAGFATDIEITIEKNNIIRVEDNGRGMPTGIVEK 99
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ET+ TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEV V ++G E+
Sbjct: 100 TGISGVETIFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVNVHQNGHEFFL 157
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G T + ++ ++ G+ +RF D ++F ++D +T+ RIR+LAFLN
Sbjct: 158 RFEDGGKATG---PLKIINDSEKHGSIVRFKADPEIFQETQEYDFDTLNARIRQLAFLNK 214
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDL 238
+ + L E +++P++ +Y + GG+ +YV++LN +K PLH+ V + + + DGI ++
Sbjct: 215 SIRLVLCDEREAEPKRIEYK---YDGGIRQYVEYLNKNKTPLHEEVVYVEGIEDGILAEI 271
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D Y ++ + N+I T++GGTH +G + +LTR +N+ ++ +K KD +L+G+
Sbjct: 272 AMQY-NDGYIPSIYSFCNNINTMEGGTHEDGFRLALTRIINAYAREQGMIK-KDETLAGD 329
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P+P++EGQTKT+LGN EVRK+V + E L + +P+ I+
Sbjct: 330 DVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVSSILGEQLDRFFMENPETAKIIVD 389
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A KA LAAK+AR+L R+KS L +SLPGKLADCSS E EI+IVEGDSAGGSAK
Sbjct: 390 KAILASKARLAAKKARELTRRKSALEITSLPGKLADCSSKDASECEIYIVEGDSAGGSAK 449
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ +FQAILPLRGKILNVE+ +++N EI+++I A G G+ GE+ LRYHKI
Sbjct: 450 QGRNSKFQAILPLRGKILNVEKARLQRIFENNEIRSMITAFGCGI-GEEMDVSKLRYHKI 508
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHI TL+LTFFYRY + + + G +Y+ +PPL+KV +G +V+Y Y + E++
Sbjct: 509 IIMTDADVDGAHICTLMLTFFYRYLRPIIEGGYVYIAMPPLFKVAKGNRVEYVYKEEEVE 568
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V++S N ++QR+KGLGEM P QLWETT++P R LKQ+ I+DA EA+ +F LMG
Sbjct: 569 TVRASMGDNV--NVQRYKGLGEMNPEQLWETTMDPAFRTLKQVNIDDAMEADSIFEMLMG 626
Query: 599 ARVDTRKELIQNAANLVNLD 618
V+ R++ IQ A LD
Sbjct: 627 EEVEPRRDFIQENAIYATLD 646
>gi|118475783|ref|YP_892934.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam]
gi|118415008|gb|ABK83427.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam]
Length = 645
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 36 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 96 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 154 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 209
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 210 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 265 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 324 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 384 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 444 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 502
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 503 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 562
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 563 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 622
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 623 GDKVEPRRNFIQENAKYVKNLD 644
>gi|116871428|ref|YP_848209.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740306|emb|CAK19424.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 646
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 425/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGK GY VSGGLHGVG SVVNALS SLEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSTSLEVYVHREGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+FT +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEVQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKVFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDKDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 626 RVEPRRKFIEENAQYVKNLD 645
>gi|334135652|ref|ZP_08509135.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
gi|333606847|gb|EGL18178.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
Length = 638
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/620 (50%), Positives = 422/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGY + I+V + DN ++V DNGRGIP+ H
Sbjct: 28 MYIGSTSSRGLHHLVWEVVDNSIDEALAGYCTRIDVIVHKDNRITVIDNGRGIPVGEHAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE VLTVLHAGGKFGG SGY VSGGLHGVG+SVVNALS L V V G + Q
Sbjct: 88 MKRPALEVVLTVLHAGGKFGGDDSGYKVSGGLHGVGISVVNALSSHLLVRVKLHGKIHEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP L + + GT + F PD ++FT ++++ + RIRELAFLN
Sbjct: 148 EYRQGKPQYDLRI----IGETEETGTTVTFTPDPEIFTETTEYEYEILQSRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L E +D ++ + + GG++ +V+ LN +K+ LH + + I +++A
Sbjct: 204 GIEINLIDERTDTSES----FMYEGGIKSFVEHLNRNKEALHQPPIYVEGSKENIQVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y++ + +AN+I T +GGTH G K++LTR LN +K+ +K+ +LSG+
Sbjct: 260 IQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRILNDYARKTNAIKESGSNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGL IISV++P P+FEGQTKT+LGN EVR +VD E L E+L+ +P + I+ K
Sbjct: 319 VREGLAAIISVKIPEPQFEGQTKTKLGNSEVRGIVDSLFAEKLLEFLDENPAIAKKIVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AA++AR+L R+KSVL SSLPGKLADCSS SE++IVEGDSAGGSAKQ
Sbjct: 379 GLQASRAREAARKARELTRRKSVLEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + N EI+ +I A+G G+ +DF RYHK+I
Sbjct: 439 GRDRHFQAILPIRGKILNVEKARLDKILSNLEIRAIITAMGTGI-SDDFDITKARYHKLI 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT+FYRY + L + G +Y+ PPLYK+ERGK +Y Y D + +
Sbjct: 498 IMTDADVDGAHIRTLLLTYFYRYMRKLIEVGYVYIAQPPLYKLERGKVARYAYSDKQRDE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ F A ++QR+KGLGEM QLW+TT++PE R L Q+ I+DA +A+ +F +LMG
Sbjct: 558 IMKEFGEGAKVNVQRYKGLGEMDAEQLWDTTMDPETRTLLQVTIQDAMDADSIFDTLMGD 617
Query: 600 RVDTRKELIQNAANLV-NLD 618
V+ R+ I A V NLD
Sbjct: 618 NVEPRRNFIHQHAKYVKNLD 637
>gi|419841535|ref|ZP_14364903.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386904754|gb|EIJ69539.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 638
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/621 (48%), Positives = 420/621 (67%), Gaps = 10/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L DN + V DNGRGIP+D+HP
Sbjct: 24 MYIGTTSARGLHHLVWEVVDNSVDEALAGYCNRITVSILPDNIIQVEDNGRGIPVDIHPK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE EV V R+G Y+Q
Sbjct: 84 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISVVNALSEWTEVKVKREGNVYYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP+ + + +++ + GT + F PD ++F T I F++ + R++ELA+LN
Sbjct: 142 KYLRGKPIEDVKI-ISALEAGETTGTIVTFKPDIEIFETVI-FEYEVLQHRLKELAYLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I L D E + + F GG+ ++++ + + + L + + + +D+A
Sbjct: 200 GLEINLL--DCRNEIGKKESFQFEGGISDFLKEVTQENQTLLSKQIHIEGQAEQVGVDIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + S+ + + N+I T +GG+H+ G + LT+ +N +GK +K+KD L G
Sbjct: 258 FTYTT-GQSEIIYSFVNNINTTEGGSHVTGFRTCLTKVINDIGKNQGFLKEKDGKLQGGD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IISV+VP P+FEGQTKT+LGN EV +V+ + L +LE +P+ I+ K
Sbjct: 317 IREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNTVLSTDLKIFLEDNPNDTKLIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA+RAR+ V +KSVL SLPGKLADCSS PEE EIF+VEGDSAGGSAKQ
Sbjct: 377 ILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSKKPEECEIFLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ +++EI+ ++ A G + E F E LRY KII
Sbjct: 437 GRDRYFQAILPLKGKILNVEKAGLHKALESDEIRAMVTAFGTNIGEESFDLEKLRYGKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GK ++Y Y D++LK+
Sbjct: 497 LMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKVSFGKSIRYAYTDSQLKE 556
Query: 540 VKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y++QR+KGLGEM P QLWETT++PE R+L ++ I++A EA+++F LMG
Sbjct: 557 MLQGMEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVSIDNAREADMLFDKLMG 616
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E IQ A V N+D
Sbjct: 617 DKVEPRREFIQEHAEYVKNID 637
>gi|340755275|ref|ZP_08691970.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|421500122|ref|ZP_15947137.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313685793|gb|EFS22628.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|402268886|gb|EJU18245.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 638
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/621 (48%), Positives = 420/621 (67%), Gaps = 10/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+E++DN+VDEA AGY + I V++L DN + V DNGRGIP+D+HP
Sbjct: 24 MYIGTTSARGLHHLVWEVVDNSVDEALAGYCNRITVSILPDNIIQVEDNGRGIPVDIHPK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE EV V R+G Y+Q
Sbjct: 84 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGISVVNALSEWTEVKVKREGNVYYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP+ + + +++ + GT + F PD ++F T I F++ + R++ELA+LN
Sbjct: 142 KYLRGKPIEDVKI-ISALEAGETTGTIVTFKPDIEIFETVI-FEYEVLQHRLKELAYLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I L D E + + F GG+ ++++ + + + L + + + +D+A
Sbjct: 200 GLEINLL--DCRNEIGKKESFQFEGGISDFLKEVTQENQTLLSKQIHIEGQAEQVGVDIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + S+ + + N+I T +GG+H+ G + LT+ +N +GK +K+KD L G
Sbjct: 258 FTYTT-GQSEIIYSFVNNINTTEGGSHVTGFRTCLTKVINDIGKSQGFLKEKDGKLQGGD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IISV+VP P+FEGQTKT+LGN EV +V+ + L +LE +P+ I+ K
Sbjct: 317 IREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNTVLSTDLKIFLEDNPNDTKLIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA+RAR+ V +KSVL SLPGKLADCSS PEE EIF+VEGDSAGGSAKQ
Sbjct: 377 ILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSKKPEECEIFLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ +++EI+ ++ A G + E F E LRY KII
Sbjct: 437 GRDRYFQAILPLKGKILNVEKAGLHKALESDEIRAMVTAFGTNIGEESFDLEKLRYGKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GK ++Y Y D++LK+
Sbjct: 497 LMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKVSFGKSIRYAYTDSQLKE 556
Query: 540 VKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y++QR+KGLGEM P QLWETT++PE R+L ++ I++A EA+++F LMG
Sbjct: 557 MLQGMEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVSIDNAREADMLFDKLMG 616
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E IQ A V N+D
Sbjct: 617 DKVEPRREFIQEHAEYVKNID 637
>gi|145578015|gb|ABP82726.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar ostriniae]
Length = 632
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GL+HLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLYHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKLGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|433638427|ref|YP_007284187.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
gi|433290231|gb|AGB16054.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
Length = 643
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 311/615 (50%), Positives = 425/615 (69%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V + D SVSV D+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCEDITVTIHEDGSVSVVDDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTV RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVTVTRDGGIYEH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG+P + V D+ + GT IRFWPD Q+F T ++F + T++ R+RELAFLN
Sbjct: 145 GFDRGEPDGEME-QVGEPDASNETGTSIRFWPDDQIFET-LEFSYATLSNRLRELAFLNS 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I LR E + D E E F + GG+ E+V+++N + PLH DVV F + I ++
Sbjct: 203 GVAITLRDEREVDDEGVIVQETFEYDGGIREFVEYINETRSPLHRDVVYFTDEDQSIQVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANENDLLSDLDENLKG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E +PD +I+
Sbjct: 322 EDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDGLATYFEENPDTAQAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KA AAK+A +L R+KS L S++LPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 382 LKAVEAAKARKAAKQAEELTRRKSALDSTALPGKLADCQTRDPDEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ +QAILP++GKILNVE+ + +N+EI+NLI A+G G+ G++F + +RY K
Sbjct: 442 KQARNPDYQAILPIKGKILNVEKHRLDRILENDEIRNLITAIGAGI-GDEFDLDEVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 501 IIMATDADVDGAHIRTLLLTFFYRHMRPLIEHGYVYATQPPLYRIRYRGETYDAMTDAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ + +QRFKGLGEM P QLW+TT+NPE R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DEIVAEKCDGNPSQVQRFKGLGEMNPEQLWDTTMNPENRILKQVSIEDAAAADRMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I+ A
Sbjct: 621 GDAVEPRKQFIKENA 635
>gi|385798923|ref|YP_005835327.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309388287|gb|ADO76167.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 640
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 428/621 (68%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLVYE++DN++DEA AGY S + V + N + V D+GRGIP+++HP
Sbjct: 29 MYIGSTSLEGLHHLVYEVVDNSIDEAMAGYCSEVIVEIKPGNIIKVQDDGRGIPVEIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYH 119
+K A+E V+T LHAGGKFGG GY VSGGLHGVG+SVVNAL+E +EV + W+DG Y
Sbjct: 89 VDKPAVEVVMTTLHAGGKFGGE--GYKVSGGLHGVGISVVNALTEWMEVEIAWKDGKVYK 146
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
QKY RG P L ++ + GT I F PD +F I FD +A R++ELAFLN
Sbjct: 147 QKYERGIPQHEL--QLIGNCDGNCTGTTIEFKPDPLIFE-EIDFDFKLLAKRLKELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDL 238
+ I + D+ E+ Q ++ F GGL +V++L+ KKPL + + + + +I++
Sbjct: 204 KGINIKIV--DNRKEEVQQEDFHFDGGLISFVEYLSQSKKPLLSEPIYIEDEAEEGSIEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+ + Y+ ++ +AN+I T +GGTH+ G K++ TRT N + +KD D +L G+
Sbjct: 262 AIMY-HQGYNTSLYTFANNINTKEGGTHLSGFKSATTRTFNDYARNKNLLKDGDDNLKGQ 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+ IISV++ P+FEGQTKT+LGN E+R VD +V +L YLE +P V +I+
Sbjct: 321 DIREGMIAIISVKLSEPQFEGQTKTKLGNSEMRGFVDSAVSSFLKTYLEENPKVGKAIIE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++SA A AA++ARDL R+KS L S++LPGKLADCS +++E++IVEGDSAGGSAK
Sbjct: 381 KAISAAHARKAARKARDLTRRKSALTSTALPGKLADCSKRKADDTEVYIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+R FQAILPL+GKILNVE+ + N+EI+ LI A+G GV GE+F +RY +I
Sbjct: 441 QGRNREFQAILPLKGKILNVEKSRLNKILNNDEIRALITAIGTGV-GEEFDLTNIRYDRI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYKV++G++ +Y Y+D LK
Sbjct: 500 IIMTDADVDGAHIRTLLLTFFYRYMRPLLENGNIYIAQPPLYKVKKGRREEYVYNDKALK 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + + S+QR+KGLGEM P QLW+TT++PE R+L Q+ IEDA A+ FS LMG
Sbjct: 560 ELIEEIGKDRV-SMQRYKGLGEMNPSQLWDTTMDPENRILLQVDIEDAIRADETFSILMG 618
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V R+E IQ A V NLD
Sbjct: 619 DKVAPRREFIQKHAREVKNLD 639
>gi|423556993|ref|ZP_17533296.1| DNA gyrase subunit B [Bacillus cereus MC67]
gi|401193768|gb|EJR00770.1| DNA gyrase subunit B [Bacillus cereus MC67]
Length = 642
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSIELEVFVHRDGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPAADLKV----IGETDRTGTITRFKPDAEIFTETTEYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|145577965|gb|ABP82701.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGETDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|241889819|ref|ZP_04777117.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
gi|241863441|gb|EER67825.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
Length = 638
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/619 (49%), Positives = 426/619 (68%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY + I VA+ N + V DNGRGIP+D+
Sbjct: 30 MYIGSTSSKGLHHLVWEIVDNSIDEALAGYCNTITVAIEEGNWIRVEDNGRGIPVDIQEQ 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALE +LTVLHAGGKFGG S LHGVG SVVNALS +LE +V RDG Y
Sbjct: 90 TGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEASVHRDGKIYSM 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG V +T + DR GT IRF D ++F ++++ + RIRELAFLN
Sbjct: 148 KFERGDVVQGITV----IGDTDRTGTTIRFKADPEIFQETTVYEYDILRTRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI L+ E EK + + + GGL EYV+ LN +K LH+ + ++DG +++++
Sbjct: 204 GITIILKDERIGQEKEE--TFCYEGGLLEYVEMLNENKDALHEAIYVHGEMDGKEVEISM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ + YS+ +L YAN+I T +GGTH G K +LTR +NS GKK+K +KDK+ SL+G+ V
Sbjct: 262 QYNT-GYSNNVLSYANNINTHEGGTHESGFKTALTRIINSYGKKNKLIKDKE-SLTGDDV 319
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P I+ K
Sbjct: 320 REGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKTAKIIVEKG 379
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK G
Sbjct: 380 LQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLG 439
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
R+ +FQAILPL+GKILNVE+ + N+E+++LI A+G+G+ GE + LRYHKI+I
Sbjct: 440 RNSKFQAILPLKGKILNVEKVRIDKVLANDEVRSLITAIGMGI-GETLNIDKLRYHKIVI 498
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDG+HIRTLLLTFF+RY + L D G +Y+ PPLY ++ GK+ YC+ + ELK+
Sbjct: 499 MTDADVDGSHIRTLLLTFFFRYMRELIDAGYVYIARPPLYGLKVGKKEFYCHTEEELKQN 558
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ Y++QR+KGLGEM +LW+TT++PE R++ Q+ + DA A+ F +LMG +
Sbjct: 559 IEEHAGDKKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYQVSVNDAQRADAAFDTLMGEK 618
Query: 601 VDTRKELIQ-NAANLVNLD 618
V+ R++ I+ NA N++NLD
Sbjct: 619 VEPRRKFIEDNALNVINLD 637
>gi|423355976|ref|ZP_17333600.1| DNA gyrase subunit B [Bacillus cereus IS075]
gi|423374937|ref|ZP_17352274.1| DNA gyrase subunit B [Bacillus cereus AND1407]
gi|423554056|ref|ZP_17530382.1| DNA gyrase subunit B [Bacillus cereus ISP3191]
gi|423571385|ref|ZP_17547628.1| DNA gyrase subunit B [Bacillus cereus MSX-A12]
gi|401080923|gb|EJP89205.1| DNA gyrase subunit B [Bacillus cereus IS075]
gi|401093153|gb|EJQ01268.1| DNA gyrase subunit B [Bacillus cereus AND1407]
gi|401181489|gb|EJQ88637.1| DNA gyrase subunit B [Bacillus cereus ISP3191]
gi|401201206|gb|EJR08082.1| DNA gyrase subunit B [Bacillus cereus MSX-A12]
Length = 642
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|229176169|ref|ZP_04303661.1| DNA gyrase subunit B [Bacillus cereus MM3]
gi|228607328|gb|EEK64658.1| DNA gyrase subunit B [Bacillus cereus MM3]
Length = 640
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 428/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|145577973|gb|ABP82705.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T A R+RELAFLN
Sbjct: 142 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTSATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|145578001|gb|ABP82719.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar shandongiensis]
Length = 632
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P S I+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISGIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLGKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|435848705|ref|YP_007310955.1| DNA gyrase subunit B [Natronococcus occultus SP4]
gi|433674973|gb|AGB39165.1| DNA gyrase subunit B [Natronococcus occultus SP4]
Length = 641
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 305/613 (49%), Positives = 417/613 (68%), Gaps = 7/613 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ I V++ AD SV VAD+GRGIP+D H
Sbjct: 27 MYIGSTDARGLHHLVYEVVDNSIDEALAGHCDEITVSIEADGSVVVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT IRFWPD +F +F +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RVRDMEPDEDTGTEIRFWPDSDIFE-GDEFSFSTLSSRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I LR E + E Y + GG+ E+V++LN + +HD V+ F + I +++A
Sbjct: 203 GVRITLRDERQETEDAVAETYEYEGGIREFVEYLNETRAVMHDDVIYFEDEEQDIQVEVA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q D ++ +AN+I T +GGTH+ G K +LTR +N G + D D +L GE
Sbjct: 263 MQATEDLQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYGNDQGLLGDIDGNLKGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+ K
Sbjct: 322 IREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHERLGTYFEEHPDTAEAIVVK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ
Sbjct: 382 AVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQ 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII
Sbjct: 442 ARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFNIDDVRYKKII 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY+V + DAE +
Sbjct: 501 MATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTDAERNE 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +QRFKGLGEM P QLWETT+NP+ R+LK++ +EDAA A+ +FS LMG
Sbjct: 561 IVEEVCDGNPTQVQRFKGLGEMNPEQLWETTMNPDNRILKRITVEDAAAADKMFSVLMGD 620
Query: 600 RVDTRKELIQNAA 612
V+ RK+ I++ A
Sbjct: 621 AVEPRKQFIKDNA 633
>gi|145577981|gb|ABP82709.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar seoulensis]
Length = 632
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGG A
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGCA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|297588052|ref|ZP_06946696.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
gi|297574741|gb|EFH93461.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
Length = 638
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/624 (50%), Positives = 431/624 (69%), Gaps = 19/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AG I+V + DNSV V D+G GIP++ HP
Sbjct: 27 MYIGSTDEKGLHHLVYEVVDNSIDEALAGVCDLIKVTIKKDNSVIVEDDGSGIPVETHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q
Sbjct: 87 TGKSTLETVLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +GK VT LT V GT I F PD +F T + FD N +A R RE+AFLN
Sbjct: 145 RFEKGKTVTELTVIKENVRG---TGTTIEFMPDNTIFET-LNFDKNVLAKRFREMAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDL 238
+ I E+ Y E F + GG++ +V+++N KKPL H+V+ + D +++
Sbjct: 201 GVKIEFA-----DEREGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEI 255
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +++Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG+
Sbjct: 256 AMQY-TESYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSGD 314
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREG+T ++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+
Sbjct: 315 DVREGITAVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVKTIIQ 374
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+L++ KA LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSAK
Sbjct: 375 KALASQKARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEHNEIFLVEGDSAGGSAK 434
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRD +FQAILPLRGKILNVE+ + + EI+ +I A G G+ G++F LRY KI
Sbjct: 435 GGRDNKFQAILPLRGKILNVEKAHLERVLNSNEIKAMITAFGTGI-GKNFDISKLRYGKI 493
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAEL 537
+I+TDADVDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + EL
Sbjct: 494 VIMTDADVDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEKEL 553
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSS 595
++ + + +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F
Sbjct: 554 EEALEKYGERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFDV 613
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG V+ R+E I QNA N+D
Sbjct: 614 LMGDNVEPRREFIEQNAVYAQNID 637
>gi|363890517|ref|ZP_09317846.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
gi|361965108|gb|EHL18101.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
Length = 641
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/624 (49%), Positives = 434/624 (69%), Gaps = 20/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AG+ I V++ +N ++V DNGRGIP+++HP
Sbjct: 31 MYIGSTGSKGLHHLVYEVVDNAIDEALAGFCDKIYVSIDVNNGITVIDNGRGIPVEVHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V ++G Y Q
Sbjct: 91 TGKSTLETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKEGKVYKQ 148
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
++ G VT + TC + + GT I F PD+++F + + T+ R+RELA
Sbjct: 149 EFEYGNAVTDIKQIGTCPL------EETGTCISFLPDEKIFDETV-YSFETLEHRLRELA 201
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-T 235
FLN ++I L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG
Sbjct: 202 FLNKGISITL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYD 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
I++A+Q+ +DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD +
Sbjct: 260 IEIAMQY-TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENF 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE +REGLT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P
Sbjct: 319 TGEDIREGLTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARI 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K + + +A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGG
Sbjct: 379 IMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK+GR+ + QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRY
Sbjct: 439 SAKEGRNSQNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII++DADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y
Sbjct: 498 HKIIIMSDADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSSE 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL++ + + + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ FS
Sbjct: 558 ELEQKLNEIGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADETFSI 616
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ IQ A V NLD
Sbjct: 617 LMGDKVEPRRDFIQQNARYVENLD 640
>gi|145577987|gb|ABP82712.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar wratislaviensis]
Length = 632
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEAIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWET ++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETAMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|190710611|gb|ACE95136.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKA----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|423572847|ref|ZP_17548966.1| DNA gyrase subunit B [Bacillus cereus MSX-D12]
gi|423608165|ref|ZP_17584057.1| DNA gyrase subunit B [Bacillus cereus VD102]
gi|401216316|gb|EJR23028.1| DNA gyrase subunit B [Bacillus cereus MSX-D12]
gi|401238174|gb|EJR44615.1| DNA gyrase subunit B [Bacillus cereus VD102]
Length = 642
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 33 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 93 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 151 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 206
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 207 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 262 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 321 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 381 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 441 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 500 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 560 EKILAELPAQPKPGIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 619
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 620 GDKVEPRRNFIQENAKYVKNLD 641
>gi|403669915|ref|ZP_10935091.1| DNA gyrase subunit B [Kurthia sp. JC8E]
Length = 639
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/619 (48%), Positives = 421/619 (68%), Gaps = 11/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+A++I VA+ DN + V DNGRGIP+D
Sbjct: 30 MYIGSTSSKGLHHLVWEIVDNSIDEALAGFATDIVVAIEKDNWIRVEDNGRGIPVDTQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++TVLHAGGKFGG S LHGVG SVVNALS V V RDG +
Sbjct: 90 VGKPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTQTIVQVHRDGHIHEI 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG+ V L + D GT RF D ++F ++ + +A R+RELA+LN
Sbjct: 148 KFERGQTVQELKV----IGDTDHNGTTTRFKADPEIFKETTVYEFDILAHRVRELAYLNR 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ I++ E E+ ++Y + GG++ YV+ +N K+P+H+ + + + DGI+I++A+
Sbjct: 204 GIRISIIDEREGQERR--SDYHYEGGIKSYVEHINEKKEPIHEAIDLKGEKDGISIEIAM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ S ++ + +AN+I T +GGTH G K +LTR +N +K+ +K D +LSGE V
Sbjct: 262 QYNS-GFATNIFSFANNINTYEGGTHESGFKTALTRVINDYARKNSLLKSADANLSGEDV 320
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL I+S++ P+P+FEGQTKT+LGN EV + + E+ +L +P V +I+ K
Sbjct: 321 REGLVAIVSIKHPDPQFEGQTKTKLGNSEVSTITNSLFSEHFERFLLENPTVARTIVDKG 380
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR++ R+KS L SSLPGKLADCSS PEE EI+IVEGDSAGGSAK G
Sbjct: 381 LIASRARVAAKKAREMTRRKSALEVSSLPGKLADCSSRHPEECEIYIVEGDSAGGSAKSG 440
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N EI+ +I A+G G+ GE+F E RYHKI+I
Sbjct: 441 RDRHFQAILPLRGKILNVEKARLDRILSNAEIRAMITAIGTGI-GEEFNLEKARYHKIVI 499
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFF+R+ + L + G +Y+ PPLY+V++GK ++YCY DAEL+++
Sbjct: 500 MTDADVDGAHIRTLLLTFFFRFMRPLIEAGYVYIAQPPLYQVKQGKHLEYCYSDAELQEI 559
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
S +QR+KGLGEM QLW+TT++PE R+L Q+ ++DA EA+ F LMG
Sbjct: 560 LSGLSQQPKPMVQRYKGLGEMNADQLWDTTMDPEHRVLLQVELDDALEADRAFEDLMGDD 619
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R++ I +NA + NLD
Sbjct: 620 VEPRRKFIHENAVYVENLD 638
>gi|387789733|ref|YP_006254798.1| DNA gyrase subunit B [Solitalea canadensis DSM 3403]
gi|379652566|gb|AFD05622.1| DNA gyrase, B subunit [Solitalea canadensis DSM 3403]
Length = 653
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/629 (49%), Positives = 432/629 (68%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AG+ ++I V + DNS+SV DNGRGIP +H
Sbjct: 32 MYIGDVGVKGLHHLVYEVVDNSIDEALAGFCNDIYVTIHKDNSISVKDNGRGIPTGMHTK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 92 EKKSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKAEVHREGKVWVQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP V V + GT + F PD ++FT ++++T+A R+RELA+LN
Sbjct: 150 EYERGKP----QYDVKTVGETNITGTIVTFTPDTEIFTLTTIYNYDTLAARLRELAYLNK 205
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+LT+ +E +D N YF GGL+E++ +L+ +++PL + + + GI ++
Sbjct: 206 GIRLTLTDERETNDDGSYVVNSYFSEGGLKEFITYLDGNREPLIPEPIYIDGNKSGIPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
LALQ+ S YS+ + Y N+I TI+GGTH+ G + LTRTL S +KS +K+ + ++G
Sbjct: 266 LALQYNS-TYSENVHSYVNNINTIEGGTHVAGFRRGLTRTLKSYAEKSGLLKNLKVEITG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT ++SV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP I+
Sbjct: 325 DDFREGLTAVVSVKVAEPQFEGQTKTKLGNNEVIGAVDQAVGEILGVYLEEHPKEARLIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KSV+ S LPGKL+DCS+ PE E+++VEGDSAGG+A
Sbjct: 385 QKVVLAATARAAARKAREMVQRKSVMSGSGLPGKLSDCSNNDPEACELYLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EAL 473
KQGRDR FQAILPL+GKILNVE+ E +Y+NEEI+N+ A+G+ + ED K E L
Sbjct: 445 KQGRDRNFQAILPLKGKILNVEKAMEHKIYENEEIKNIFTAMGVSIGTPEDDKALNLEKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL+LTFF+RY K L ++G IY+ PPLY V++GK +Y +
Sbjct: 505 RYHKIIIMTDADVDGSHITTLILTFFFRYMKALVEQGYIYIATPPLYLVKKGKDFEYAWT 564
Query: 534 D----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+ A +++VK + +++ +IQR+KGLGEM QLWETT+NP+ R L+Q+ IE+AAE
Sbjct: 565 EEQRLAAIERVKGNGKEDSV-NIQRYKGLGEMNAEQLWETTMNPDTRTLRQVTIENAAEC 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ FS LMG V R++ I+ A +D
Sbjct: 624 DHTFSVLMGDEVAPRRDFIEKHAKYAKID 652
>gi|190710551|gb|ACE95106.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
gi|190710565|gb|ACE95113.1| gyrase subunit B [Bacillus thuringiensis serovar sumiyoshiensis]
gi|190710591|gb|ACE95126.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
Length = 627
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|30260200|ref|NP_842577.1| DNA gyrase subunit B [Bacillus anthracis str. Ames]
gi|47525259|ref|YP_016608.1| DNA gyrase subunit B [Bacillus anthracis str. 'Ames Ancestor']
gi|49183044|ref|YP_026296.1| DNA gyrase subunit B [Bacillus anthracis str. Sterne]
gi|49476686|ref|YP_034365.1| DNA gyrase subunit B [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65317473|ref|ZP_00390432.1| COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase
IV), B subunit [Bacillus anthracis str. A2012]
gi|165873014|ref|ZP_02217635.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488]
gi|167635023|ref|ZP_02393340.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442]
gi|167641730|ref|ZP_02399973.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193]
gi|170689461|ref|ZP_02880651.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465]
gi|170707498|ref|ZP_02897951.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389]
gi|177655278|ref|ZP_02936832.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174]
gi|190569295|ref|ZP_03022189.1| DNA gyrase, B subunit [Bacillus anthracis str. Tsiankovskii-I]
gi|196036134|ref|ZP_03103534.1| DNA gyrase, B subunit [Bacillus cereus W]
gi|196041949|ref|ZP_03109236.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99]
gi|196045551|ref|ZP_03112782.1| DNA gyrase, B subunit [Bacillus cereus 03BB108]
gi|206975909|ref|ZP_03236820.1| DNA gyrase, B subunit [Bacillus cereus H3081.97]
gi|217957586|ref|YP_002336128.1| DNA gyrase subunit B [Bacillus cereus AH187]
gi|218901211|ref|YP_002449045.1| DNA gyrase subunit B [Bacillus cereus AH820]
gi|227812683|ref|YP_002812692.1| DNA gyrase subunit B [Bacillus anthracis str. CDC 684]
gi|228918105|ref|ZP_04081633.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930499|ref|ZP_04093499.1| DNA gyrase subunit B [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931511|ref|ZP_04094421.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228949215|ref|ZP_04111483.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228988722|ref|ZP_04148807.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229124996|ref|ZP_04254170.1| DNA gyrase subunit B [Bacillus cereus 95/8201]
gi|229142242|ref|ZP_04270766.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26]
gi|229187722|ref|ZP_04314858.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1]
gi|229603398|ref|YP_002864662.1| DNA gyrase subunit B [Bacillus anthracis str. A0248]
gi|254687066|ref|ZP_05150924.1| DNA gyrase subunit B [Bacillus anthracis str. CNEVA-9066]
gi|254724151|ref|ZP_05185936.1| DNA gyrase subunit B [Bacillus anthracis str. A1055]
gi|254742123|ref|ZP_05199810.1| DNA gyrase subunit B [Bacillus anthracis str. Kruger B]
gi|254755967|ref|ZP_05207999.1| DNA gyrase subunit B [Bacillus anthracis str. Vollum]
gi|254761353|ref|ZP_05213375.1| DNA gyrase subunit B [Bacillus anthracis str. Australia 94]
gi|375282106|ref|YP_005102538.1| DNA gyrase subunit B [Bacillus cereus NC7401]
gi|376264036|ref|YP_005116748.1| DNA gyrase subunit B [Bacillus cereus F837/76]
gi|386733878|ref|YP_006207059.1| DNA gyrase subunit B [Bacillus anthracis str. H9401]
gi|421508143|ref|ZP_15955059.1| DNA gyrase subunit B [Bacillus anthracis str. UR-1]
gi|421640490|ref|ZP_16081073.1| DNA gyrase subunit B [Bacillus anthracis str. BF1]
gi|49066055|sp|Q9X3Y6.2|GYRB_BACAN RecName: Full=DNA gyrase subunit B
gi|30253521|gb|AAP24063.1| DNA gyrase, B subunit [Bacillus anthracis str. Ames]
gi|47500407|gb|AAT29083.1| DNA gyrase, B subunit [Bacillus anthracis str. 'Ames Ancestor']
gi|49176971|gb|AAT52347.1| DNA gyrase, B subunit [Bacillus anthracis str. Sterne]
gi|49328242|gb|AAT58888.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51988026|dbj|BAD44714.1| gyraseB [Bacillus anthracis]
gi|164711226|gb|EDR16782.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488]
gi|167510284|gb|EDR85687.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193]
gi|167529497|gb|EDR92247.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442]
gi|170127494|gb|EDS96368.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389]
gi|170666563|gb|EDT17336.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465]
gi|172080205|gb|EDT65297.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174]
gi|190559602|gb|EDV13593.1| DNA gyrase, B subunit [Bacillus anthracis str. Tsiankovskii-I]
gi|195991301|gb|EDX55269.1| DNA gyrase, B subunit [Bacillus cereus W]
gi|196023758|gb|EDX62434.1| DNA gyrase, B subunit [Bacillus cereus 03BB108]
gi|196027204|gb|EDX65824.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99]
gi|206746003|gb|EDZ57399.1| DNA gyrase, B subunit [Bacillus cereus H3081.97]
gi|217063046|gb|ACJ77296.1| DNA gyrase, B subunit [Bacillus cereus AH187]
gi|218537455|gb|ACK89853.1| DNA gyrase, B subunit [Bacillus cereus AH820]
gi|227004428|gb|ACP14171.1| DNA gyrase, B subunit [Bacillus anthracis str. CDC 684]
gi|228595790|gb|EEK53474.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1]
gi|228641260|gb|EEK97567.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26]
gi|228658497|gb|EEL14163.1| DNA gyrase subunit B [Bacillus cereus 95/8201]
gi|228771034|gb|EEM19515.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228810498|gb|EEM56851.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228828154|gb|EEM73878.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228829218|gb|EEM74855.1| DNA gyrase subunit B [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841585|gb|EEM86701.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229267806|gb|ACQ49443.1| DNA gyrase, B subunit [Bacillus anthracis str. A0248]
gi|358350626|dbj|BAL15798.1| DNA gyrase, B subunit [Bacillus cereus NC7401]
gi|364509836|gb|AEW53235.1| DNA gyrase subunit B [Bacillus cereus F837/76]
gi|384383730|gb|AFH81391.1| DNA gyrase subunit B [Bacillus anthracis str. H9401]
gi|401821946|gb|EJT21100.1| DNA gyrase subunit B [Bacillus anthracis str. UR-1]
gi|403392443|gb|EJY89696.1| DNA gyrase subunit B [Bacillus anthracis str. BF1]
Length = 640
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|358051218|ref|ZP_09145436.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
gi|357259294|gb|EHJ09133.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
Length = 644
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/619 (51%), Positives = 422/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA+ IEV + DN + V DNGRGIP+D+
Sbjct: 34 MYIGSTSERGLHHLVWEIVDNSIDEALAGYANKIEVIIQEDNWIKVTDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V+R+ YHQ
Sbjct: 94 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVYRNDTIYHQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P L V + D GT IRF D +FT +++ T+ RIRELAFLN
Sbjct: 152 AYKKGVPQFDLK----EVGTTDVTGTTIRFKADGSIFTETQVYNYETLQQRIRELAFLNK 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L K++ D E + + Y + GG++ YV+ LN +K+PL+D + + D + +++A
Sbjct: 208 GIEITL-KDERDKENIREDSYHYEGGIKSYVELLNENKEPLYDEPIYIHQSKDDVEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y+ +L YAN+I T +GGTH +G K +LTR LN+ G SK +K+ L+GE
Sbjct: 267 IQYNS-GYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGLNSKIMKEDKERLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REG+T I+S++ +P+FEGQTKT+LGN EVR++VD+ E+ +L +P V I+ K
Sbjct: 326 TREGMTAIVSIKHSDPQFEGQTKTKLGNSEVRQIVDKLFSEHFERFLYENPQVARVIVDK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A A +AAK+AR++ R+KS L +SLPGKLADCSS PEE EIF+VEGDSAGGS K
Sbjct: 386 GIMASHARVAAKKAREVTRRKSALDVASLPGKLADCSSKVPEECEIFLVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+
Sbjct: 446 GRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLSKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K
Sbjct: 505 IMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLW+TT+NPE R L Q+ +EDA EA+ F LMG
Sbjct: 565 LKAELNPTPKWSIARYKGLGEMNADQLWDTTMNPEHRSLLQVKLEDAIEADQTFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|421526684|ref|ZP_15973291.1| DNA gyrase subunit B [Fusobacterium nucleatum ChDC F128]
gi|402257241|gb|EJU07716.1| DNA gyrase subunit B [Fusobacterium nucleatum ChDC F128]
Length = 635
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/625 (49%), Positives = 422/625 (67%), Gaps = 20/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVVDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G+ ++Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKTGVIHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ +D GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KIIGSCGEDEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGIT 235
LTI L D E+ + Y F GG+ +++ + D +KP + + D +
Sbjct: 198 GLTITL--SDLRKEEKKEEVYKFDGGILDFLNEIVKDDTTIIEKPFY----VSAEQDNVG 251
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+D+ + + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L
Sbjct: 252 VDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKL 310
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++
Sbjct: 311 MGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKI 370
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGG
Sbjct: 371 IIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGG 430
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY
Sbjct: 431 SAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRY 489
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D
Sbjct: 490 GKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDL 549
Query: 536 ELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F
Sbjct: 550 ELKNVLGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFD 609
Query: 595 SLMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+E I+ A V N+D
Sbjct: 610 KLMGDKVEPRREFIEEHAEYVKNID 634
>gi|347547515|ref|YP_004853843.1| putative DNA gyrase subunit B [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980586|emb|CBW84487.1| Putative DNA gyrase subunit B [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 646
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 425/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGK GY VSGGLHGVG SVVNALS SLEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSTSLEVYVHREGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+FT +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKVFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKARYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDKDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 626 RVEPRRKFIEENAQYVKNLD 645
>gi|383752835|ref|YP_005431738.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381364887|dbj|BAL81715.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 672
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 427/620 (68%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY I+V + DNS++V DNGRGIP+D+H
Sbjct: 65 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDKIDVTIHRDNSITVTDNGRGIPVDMHE- 123
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG +
Sbjct: 124 SGMPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTSMEVQVKRDGKIHEI 181
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG+ V L HV + GTR+ F PD ++F+ + ++T+ R+RELAFLN
Sbjct: 182 SFKRGETVEKL--HV--TGETEITGTRVHFVPDPEIFSVTT-YSYDTLKHRLRELAFLNH 236
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+TI L E + +++ ++ F GG+ +V+ LN K+ ++ + + F D +++A
Sbjct: 237 GITIVLNDERGEELRSE--QFHFEGGISSFVEHLNRKKEKINPEPIYFNGTKDDTVVEIA 294
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSG+
Sbjct: 295 LQY-NDSYQENIYSFVNNINTEEGGTHLAGFKLALTRAANDFARKQNILKDKDGNLSGDD 353
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++V +P+FEGQTKT+LGN EVR +VD V E L+EY E +P + + K
Sbjct: 354 VREGLTAVISLKVRDPQFEGQTKTKLGNSEVRGIVDSIVTEGLSEYFEENPTITKKFIEK 413
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+K+ L SSLPGKLADCS PE +EI++VEGDSAGGSAKQ
Sbjct: 414 AIMAARAREAARKARELTRRKNALEVSSLPGKLADCSVKDPEMAEIYLVEGDSAGGSAKQ 473
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ +DF RY KII
Sbjct: 474 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-DDFDLSKRRYGKII 532
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF YRY K L + G +++ PPLY++ +GK+ Y Y D EL K
Sbjct: 533 IMTDADVDGAHIRTLLLTFLYRYMKPLIEHGHVFIAQPPLYQIRKGKKHWYTYSDEELAK 592
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++QR+KGLGEM P QLWETT++P R + ++ + DA A+ +F+ LMG
Sbjct: 593 KLDEVGRDG-STVQRYKGLGEMNPEQLWETTMDPAGRTMLRVEMADAEAADELFTILMGD 651
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 652 KVEPRRQFIEENAKLVRNLD 671
>gi|145577967|gb|ABP82702.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
cereus]
Length = 632
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGTQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKVLSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|301051746|ref|YP_003789957.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis
str. CI]
gi|300373915|gb|ADK02819.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis
str. CI]
Length = 640
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKI----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|332685539|ref|YP_004455313.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|379726623|ref|YP_005318808.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
gi|332369548|dbj|BAK20504.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|376317526|dbj|BAL61313.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
Length = 650
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/627 (49%), Positives = 424/627 (67%), Gaps = 22/627 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A+ I V + DNS++V D+GRGIP+D+
Sbjct: 36 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIRVTIEKDNSITVVDDGRGIPVDIQEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGKFGG S LHGVG SVVNALS LE V+R+G Y+Q
Sbjct: 96 TGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTKLEARVYRNGKIYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L + DR GT I F PD ++F I+F+ +A R+RELAFLN
Sbjct: 154 EYHRGNVVADLKV----IGDTDRHGTAIHFIPDPEIFKETIEFNFEKLATRVRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I++ ED + +Y++ GG++ YV LN +K L D V G +++ IT+
Sbjct: 210 GLKISI--EDLRGPETVLRDYYYEGGIKSYVGHLNANKDVLFDEPIYVEGEQQE---ITV 264
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++++Q+ +D Y +L +AN+I T +GGTH G K +LTR +N KK K +K+ D +L+
Sbjct: 265 EVSMQY-TDGYHSNLLSFANNIHTYEGGTHEAGFKTALTRVINDYAKKQKLMKENDENLT 323
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLTC+IS++ P P+FEGQTKT+LGN EVR V D+ E+ ++L +P + I
Sbjct: 324 GEDVREGLTCVISIKHPEPQFEGQTKTKLGNSEVRTVTDRLFSEHFGKFLMENPTIGKKI 383
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K L A KA LAAKRAR++ R+K L S+LPGKLADCSS E+ E+FIVEGDSAGGS
Sbjct: 384 VDKGLLASKARLAAKRAREVTRRKGNLEISNLPGKLADCSSREAEKCELFIVEGDSAGGS 443
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYH
Sbjct: 444 AKQGRDRMFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYH 502
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD--- 533
K+II+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y
Sbjct: 503 KLIIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKQ 562
Query: 534 -DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
+ EL + + P + S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA A+ +
Sbjct: 563 AEEELSHLMETLPKSPKASVQRYKGLGEMDDHQLWETTMDPERRLMSRVSVDDAVAADQI 622
Query: 593 FSSLMGARVDTRKELIQNAANLV-NLD 618
F LMG +V+ R+ I+ A+ V NLD
Sbjct: 623 FEMLMGDKVEPRRAFIEENAHYVKNLD 649
>gi|332685540|ref|YP_004455314.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|332369549|dbj|BAK20505.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
Length = 643
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/627 (49%), Positives = 424/627 (67%), Gaps = 22/627 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A+ I V + DNS++V D+GRGIP+D+
Sbjct: 29 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFATEIRVTIEKDNSITVVDDGRGIPVDIQEK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV T+LHAGGKFGG S LHGVG SVVNALS LE V+R+G Y+Q
Sbjct: 89 TGRPAVETVFTILHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTKLEARVYRNGKIYYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L + DR GT I F PD ++F I+F+ +A R+RELAFLN
Sbjct: 147 EYHRGNVVADLKV----IGDTDRHGTAIHFIPDPEIFKETIEFNFEKLATRVRELAFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I++ ED + +Y++ GG++ YV LN +K L D V G +++ IT+
Sbjct: 203 GLKISI--EDLRGPETVLRDYYYEGGIKSYVGHLNANKDVLFDEPIYVEGEQQE---ITV 257
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++++Q+ +D Y +L +AN+I T +GGTH G K +LTR +N KK K +K+ D +L+
Sbjct: 258 EVSMQY-TDGYHSNLLSFANNIHTYEGGTHEAGFKTALTRVINDYAKKQKLMKENDENLT 316
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLTC+IS++ P P+FEGQTKT+LGN EVR V D+ E+ ++L +P + I
Sbjct: 317 GEDVREGLTCVISIKHPEPQFEGQTKTKLGNSEVRTVTDRLFSEHFGKFLMENPTIGKKI 376
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K L A KA LAAKRAR++ R+K L S+LPGKLADCSS E+ E+FIVEGDSAGGS
Sbjct: 377 VDKGLLASKARLAAKRAREVTRRKGNLEISNLPGKLADCSSREAEKCELFIVEGDSAGGS 436
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYH
Sbjct: 437 AKQGRDRMFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYH 495
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD--- 533
K+II+TDADVDGAHIRTLLLT FYR+ + + + G +Y+ PPLY V++GK + Y
Sbjct: 496 KLIIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKQ 555
Query: 534 -DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
+ EL + + P + S+QR+KGLGEM QLWETT++PE+R++ ++ ++DA A+ +
Sbjct: 556 AEEELSHLMETLPKSPKASVQRYKGLGEMDDHQLWETTMDPERRLMSRVSVDDAVAADQI 615
Query: 593 FSSLMGARVDTRKELIQNAANLV-NLD 618
F LMG +V+ R+ I+ A+ V NLD
Sbjct: 616 FEMLMGDKVEPRRAFIEENAHYVKNLD 642
>gi|189499015|ref|YP_001958485.1| DNA gyrase subunit B [Chlorobium phaeobacteroides BS1]
gi|189494456|gb|ACE03004.1| DNA gyrase, B subunit [Chlorobium phaeobacteroides BS1]
Length = 644
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/620 (48%), Positives = 417/620 (67%), Gaps = 18/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHL+YEI+DN++DE AGY +IE++L D SV+V DNGRGIP+D+HP
Sbjct: 33 MYIGDLHSRGLHHLIYEIVDNSIDETLAGYNESIELSLNPDGSVTVTDNGRGIPVDIHPQ 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T++ AGGKF Y VSGGLHGVG SVVNALSE EV V+R+G + Q
Sbjct: 93 KKKSALELVMTLIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYREGNIWFQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G P + + + GT+ F PD +F +F + + R+RELAFLN
Sbjct: 151 RYHKGIPQRDVEV----IGESTKTGTKTTFMPDPDIFKIT-EFRKDIVVDRMRELAFLNN 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLA 239
L I ++ D E + + GG++E+V + + ++ L + V + D +++A
Sbjct: 206 ILKIVVKDIDGSEET-----FHYEGGIKEFVTFTDHNRISLLKEPVYISGERDSTVVEIA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLNS +K+ +K+ +SL+G+
Sbjct: 261 LQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNSYAQKNDLLKNLKLSLTGDD 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+EGLT IISV+V P+FEGQTKT+LGN E + +V+ V E L+++ E +P VL +I+ K
Sbjct: 320 FKEGLTAIISVKVAEPQFEGQTKTKLGNSETQSIVESIVNEQLSDFAESNPGVLKTIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SA + AA++A+DL R+KS L SS LPGKLADCS PE E++IVEGDSAGGSAKQ
Sbjct: 380 VKSAALSRDAARKAKDLTRRKSALESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KII
Sbjct: 440 GRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSVEKLRYGKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLTFF+RY ++L + G +++ PPLY ++ GK+ +Y +DD E
Sbjct: 500 IMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLIKSGKEQKYAWDDDERNG 559
Query: 537 -LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ ++ +IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+
Sbjct: 560 IVESIRKKQKGRGNINIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVSVENAMEADQVFST 619
Query: 596 LMGARVDTRKELIQNAANLV 615
LMG +V+ R+ I+ A V
Sbjct: 620 LMGDKVEPRRNFIEKNARYV 639
>gi|190710589|gb|ACE95125.1| gyrase subunit B [Bacillus thuringiensis serovar darmstadiensis]
Length = 627
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYANHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|190710567|gb|ACE95114.1| gyrase subunit B [Bacillus thuringiensis serovar toumanoffi]
Length = 627
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSETFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|16799085|ref|NP_469353.1| DNA gyrase subunit B [Listeria innocua Clip11262]
gi|423101125|ref|ZP_17088829.1| DNA gyrase, B subunit [Listeria innocua ATCC 33091]
gi|16412427|emb|CAC95239.1| DNA gyrase subunit B [Listeria innocua Clip11262]
gi|370792240|gb|EHN60117.1| DNA gyrase, B subunit [Listeria innocua ATCC 33091]
Length = 646
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 423/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+FT +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEVQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R++ I++ A V NLD
Sbjct: 626 RVEPRRKFIEDNAQYVKNLD 645
>gi|404369616|ref|ZP_10974950.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
gi|226914440|gb|EEH99641.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
Length = 637
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/622 (51%), Positives = 443/622 (71%), Gaps = 18/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ + I VA+ DNS++V DNGRG+P +HP
Sbjct: 29 MYIGSTSSRGLHHLVYEIVDNSIDEALAGFCTEISVAINEDNSITVIDNGRGMPTGIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E ++TVLHAGGKFGG S LHGVG SVVNALSE EVTV R+G + Q
Sbjct: 89 MGKSTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWCEVTVSREGDIWQQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG VT L+ + + GT++ F PD ++F ++D + +A R+RELAFLN
Sbjct: 147 KYSRGNAVTDLS----KIGKTEEHGTKVSFKPDTEIFEET-EYDFDILANRLRELAFLNK 201
Query: 181 KLTIALRKEDSDP-EKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I L SD E+ + Y + GG++E+V +L+ +K+ LH D + + DGI +++
Sbjct: 202 GIKIIL----SDAREEGKTEVYHYEGGIKEFVSYLSRNKEVLHQDPIYIEGEKDGIIVEI 257
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+LQ+ +D+Y++ + +AN+I TI+GGTH+ G K +LTR +N GKK +K+ D +LSG+
Sbjct: 258 SLQY-NDSYTENLYSFANNIDTIEGGTHLSGFKTALTRVINDYGKKFNHLKENDKNLSGD 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT ++SV++ P+FEGQTKT+LGN EVR VVD V E ++ +LE +P + I+
Sbjct: 317 DIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRGVVDSIVGEGVSIFLEENPGIGKIIID 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+L A +A AA++AR+L R KSVL SSLPGKLADCSS P E EI+IVEGDSAGGSAK
Sbjct: 377 KALMAARARDAARKARELTR-KSVLERSSLPGKLADCSSKDPLECEIYIVEGDSAGGSAK 435
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+RRFQAILPLRGKILNVE++ + + I++++ A G G+ G+DF +E LRY++I
Sbjct: 436 QGRNRRFQAILPLRGKILNVEKQRLDRILTADSIKSMVTAFGAGI-GDDFDEEKLRYNRI 494
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFF+RY + L D G +Y+ PPLY+V++ K+ Y Y DAEL+
Sbjct: 495 IIMTDADVDGAHIRTLLLTFFFRYMRGLLDGGHVYIAQPPLYQVKKNKKEYYAYSDAELE 554
Query: 539 KVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+ S + +IQR+KGLGEM QLW+TT++PE+R+L + +EDA A+ +F+ LM
Sbjct: 555 KLLSEIGGKDNSTNIQRYKGLGEMNANQLWDTTMDPEKRVLLKATVEDAIAADEIFTILM 614
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E IQ NA + NLD
Sbjct: 615 GDKVEPRREFIQKNAKKVSNLD 636
>gi|145577961|gb|ABP82699.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
gi|145578027|gb|ABP82732.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar poloniensis]
Length = 632
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|313674412|ref|YP_004052408.1| DNA gyrase subunit b [Marivirga tractuosa DSM 4126]
gi|312941110|gb|ADR20300.1| DNA gyrase subunit B [Marivirga tractuosa DSM 4126]
Length = 653
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/629 (48%), Positives = 425/629 (67%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHH+++E++DN++DEA AG+ + I V + DNSV+V D+GRGIP+D+H
Sbjct: 32 MYIGDVGVKGLHHMIWEVVDNSIDEAMAGHCTTITVEINEDNSVTVMDDGRGIPVDIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVW-RDGMEYH 119
+SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS L+ TV+ RDG Y
Sbjct: 92 EGRSALEVVMTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSTMLKATVYSRDGKIYE 149
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q+YS G P V PV D GT+I+F PD +F +F + T+A R+RELA+LN
Sbjct: 150 QEYSEGFPKEP----VKPVGETDVTGTKIQFKPDASIFMET-EFKYETVASRLRELAYLN 204
Query: 180 PKLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
+ I L+ D D + E FF+ GGL E+V++L+ ++ L + + +G+ +
Sbjct: 205 AGIKIKLQDHRDKDENGDSKEENFFSEGGLLEFVEYLDVSREKLIPQPIYMEGEKNGVPV 264
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+AL + + +YS+ ++ Y N+I TI+GGTH+ G + +LTRTL S KS ++ + I ++
Sbjct: 265 QVALNYNT-SYSENVVSYVNNINTIEGGTHVSGFRRALTRTLKSYADKSGLLEKQKIEIT 323
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT IISV+V P+FEGQTKT+LGN +V V+ V E L +LE +P +I
Sbjct: 324 GDDFREGLTAIISVKVAEPQFEGQTKTKLGNSDVMGAVESCVSETLQYFLEENPKAAKTI 383
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A AAK+AR++V++K+V+ S LPGKLADCS P E+++VEGDSAGGS
Sbjct: 384 VQKVILAAQARNAAKKAREMVQRKNVMSGSGLPGKLADCSEKDPSICELYLVEGDSAGGS 443
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EA 472
AKQGRDR FQAILPL+GKILNVE+ E +Y N+EI+N++ ALG+ ED +K E
Sbjct: 444 AKQGRDRNFQAILPLKGKILNVEKAQEHKIYDNDEIKNILTALGVRFGTEDDEKALNLEK 503
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKI+I+TDADVDG+HIRTL+LT F+RY + L D G +Y+ PPLY ++RGK +Y +
Sbjct: 504 LRYHKIVIMTDADVDGSHIRTLILTLFFRYMRELIDMGYVYIAQPPLYLIKRGKTERYVF 563
Query: 533 -DDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+D ++ VK P + +QR+KGLGEM P QLW TT++P R +KQ+ +E AAEA
Sbjct: 564 TEDERVEVVKEISPDGTEGAVHLQRYKGLGEMNPEQLWTTTMDPHTRKMKQVSVESAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R++ I+ A +D
Sbjct: 624 DHLFSMLMGDEVPPRRDFIEKNAKYAKID 652
>gi|326799865|ref|YP_004317684.1| DNA gyrase B subunit [Sphingobacterium sp. 21]
gi|326550629|gb|ADZ79014.1| DNA gyrase, B subunit [Sphingobacterium sp. 21]
Length = 652
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/629 (48%), Positives = 438/629 (69%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY ++I V + DNS++V DNGRGIP ++
Sbjct: 31 MYIGDVGVKGLHHLVYEVVDNSIDEALAGYCTDIHVIIHKDNSITVEDNGRGIPTGINKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+T+LHAGGKF + Y VSGGLHGVG+S VNALS L V R+G + Q
Sbjct: 91 ENKSALEMVMTMLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTLLIAEVHREGKIFKQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y++GKP+ + + DR GT + F PD +FT + ++T+AGR+RELA+LN
Sbjct: 149 EYAQGKPLYDVKV----IGETDRTGTNVTFHPDPSIFTMTTTYSYDTLAGRLRELAYLNK 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+LT+ +E+ + ++ E++ GGL E+V++L+ +++PL D + GI ++
Sbjct: 205 GIRLTLLDEREEQEDGALRHEEFYSEGGLSEFVKFLDGNRQPLIPDPIHVEGIKQGIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
LALQ+ +D YS+ + Y N+I TI+GGTH+ G + LTRTL + KS +K+ + ++G
Sbjct: 265 LALQY-NDTYSENVHSYVNNINTIEGGTHVAGFRRGLTRTLKAYADKSGLLKNLKVEITG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L YLE +P +I+
Sbjct: 324 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDVAVGEILGTYLEENPREAKAIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++ARD+V++K+V+ S LPGKLADC++ P + EI++VEGDSAGG+A
Sbjct: 384 QKVIIAAQARAAARKARDMVQRKTVMGGSGLPGKLADCANNDPAKCEIYLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EAL 473
KQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+ ALG+ + ED K E L
Sbjct: 444 KQGRNREFQAILPLRGKILNVEKAMEHKIYENEEIKNMFTALGVSIGTPEDAKALNLEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH+III+TDADVDG+HI TL+LTF++RY K L + G +Y+ PPLY V++GK+ +Y ++
Sbjct: 504 RYHRIIIMTDADVDGSHITTLILTFYFRYMKELIERGYVYIATPPLYLVKKGKEHEYAWN 563
Query: 534 D----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+ A ++++K + ++++ +QR+KGLGEM QLW+TT+NPE R L+Q+ IE+AAE
Sbjct: 564 ENQRLAAIQRLKGAGKEDSVH-VQRYKGLGEMNAEQLWDTTMNPETRTLRQVSIENAAEC 622
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS LMG V R+E I+ A +D
Sbjct: 623 DRVFSMLMGDEVAPRREFIERNAKYAKID 651
>gi|255527581|ref|ZP_05394445.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|296186779|ref|ZP_06855180.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|255508714|gb|EET85090.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|296048493|gb|EFG87926.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
Length = 637
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/624 (50%), Positives = 441/624 (70%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ NIEV + DNS++V D+GRG+P+ +HP
Sbjct: 29 MYIGSTSARGLHHLVYEIVDNSIDEALAGFCKNIEVFIHKDNSITVTDDGRGMPVGMHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++TVLHAGGKFGG S LHGVG SVVNALSE EV V R+G + Q
Sbjct: 89 MKKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSELCEVEVKREGHIWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK T L V + GT+I F PD ++F + +D++T+A R+RELAFLN
Sbjct: 147 AFERGKVKTGLEI----VGDSEGHGTKIHFKPDAEIFE-EVDYDYDTLAQRLRELAFLNR 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L SD ++ + + GG++ +V +LN +K+ ++ V G ++D ++
Sbjct: 202 NIRINL----SDERIDKLEVFHYEGGIKSFVSYLNRNKQVINKEPIYVEGNKQDC---SV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++++Q+ +D Y++ + +AN+I T++GGTH+ G K++LTR N KK +K+ D +LS
Sbjct: 255 EISIQY-NDGYTENIFSFANNIDTVEGGTHLAGFKSALTRAFNDYAKKFGILKENDKNLS 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E ++ +L+ +P V SI
Sbjct: 314 GEDIREGLTAVISVKLIDPQFEGQTKTKLGNSEVRGIVDGIVGEGVSSFLQENPQVAKSI 373
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L KSL A +A AA++AR+L R+KS+L ++SLPGKLADCSS P+E EI++VEGDSAGGS
Sbjct: 374 LDKSLMASRAREAARKARELTRRKSILENTSLPGKLADCSSKDPKECEIYLVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR+RRFQAILPLRGKI+NVE++ + EEI+ +I A G G+ G+DF E +RY
Sbjct: 434 AKQGRNRRFQAILPLRGKIMNVEKQRLDKILGYEEIRAMITAFGGGI-GKDFDVEKIRYD 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY K L D+G +Y+ PPLYKV +GK+ Y Y D E
Sbjct: 493 RIIIMTDADVDGAHIRTLLLTFFYRYMKELVDQGHVYIAQPPLYKVAKGKKEHYAYSDKE 552
Query: 537 LKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+K+ + +IQR+KGLGEM QLW+TT+NP++R+L Q+ +EDA A+ +F+
Sbjct: 553 LEKLLEDVGGKDNNTNIQRYKGLGEMDATQLWDTTMNPDERVLLQVTVEDAMAADEIFTI 612
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA ++NLD
Sbjct: 613 LMGDKVEPRREFIQENAKKVINLD 636
>gi|343520664|ref|ZP_08757633.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397622|gb|EGV10156.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
Length = 638
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/624 (49%), Positives = 432/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AG I V + DNSV V DNG GIP+++HP
Sbjct: 29 MYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTIFDDNSVRVEDNGSGIPVEVHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+SVVNALSE L V RDG Y Q
Sbjct: 89 TGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVSVVNALSEWLIANVKRDGKLYEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++SRG + L V + GT I F PD ++F T I F+ + R RE+AFLN
Sbjct: 147 QFSRGNATSKLEV----VGTSKETGTIITFKPDSEIFDTTI-FEKEILRNRFREMAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I E D Y E F + GG++ +V+++N +K LH+ V+ F+ +++
Sbjct: 202 GVKIVFTDERED-----YTETFHYEGGIKSFVEYMNRNKNNLHNEVIYFQGQRGDSQVEI 256
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
++Q+ +D YS+ +L +AN+I T +GG+H+ G K +LTRTLN G+K +KDK+ +L G+
Sbjct: 257 SMQY-TDGYSENVLTFANNIHTPEGGSHLVGFKTALTRTLNDYGRKYNLIKDKEANLQGD 315
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT I+S+++PNP+FEGQTK +LGN E R +V+ + + L +LE +P V ++
Sbjct: 316 DTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVETFLYDNLMTFLEENPKVGKIVIE 375
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC + +EI++VEGDSAGGSAK
Sbjct: 376 KAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQESDISVNEIYLVEGDSAGGSAK 435
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRD +FQA+LPL+GKI+NVE+ + EEI+++I A G G+ G+DFK + LRY KI
Sbjct: 436 QGRDSKFQAVLPLKGKIMNVEKARIDKILGYEEIKSMITAFGTGI-GKDFKLDNLRYGKI 494
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAEL 537
+I+TDADVDGAHIRTL+LTFFYRY + L ++G +Y+ PPLY + +G K V+YC+ D EL
Sbjct: 495 VIMTDADVDGAHIRTLILTFFYRYMRELIEQGHVYIAQPPLYGIIKGVKVVKYCWTDEEL 554
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV--VFSS 595
+ ++ + IQR+KGLGEM P QLWETT+NPE R+ Q+ I+D ++ FS+
Sbjct: 555 QASLDELGRDS-HRIQRYKGLGEMNPAQLWETTMNPENRLFLQVNIDDEELVSIDETFST 613
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+E I QNA + N+D
Sbjct: 614 LMGDKVEPRREFIEQNAKYVENID 637
>gi|296127762|ref|YP_003635014.1| DNA gyrase subunit B [Brachyspira murdochii DSM 12563]
gi|296019578|gb|ADG72815.1| DNA gyrase, B subunit [Brachyspira murdochii DSM 12563]
Length = 637
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/621 (49%), Positives = 410/621 (66%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY NI V + DN + V D+GRGIP+D+HP
Sbjct: 28 MYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTIEKDNIIKVEDDGRGIPVDMHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q
Sbjct: 88 LKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVRKDGKLYRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V V + + GT + F D +F T + +D+ +A R+RELAFLN
Sbjct: 146 VYHRGVPEEP----VKEVGTSTKNGTTVIFKADADIFETTV-YDYKILANRLRELAFLNR 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L D + NE+++ GG+E ++ LN +KK LHD + K D +++A
Sbjct: 201 GIRITL--TDKREAETVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKTEDKTDVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE
Sbjct: 259 MQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGL ++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K
Sbjct: 318 TREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA A AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK
Sbjct: 378 IISAANAREAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKG 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++I
Sbjct: 438 GRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GASFDISKIRYGRVI 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELK 538
I+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D +
Sbjct: 497 IMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFTYAYSDEQRD 556
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ S + Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG
Sbjct: 557 KILSE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMG 615
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
V R++ I+ NA + NLD
Sbjct: 616 DEVKPRRDFIEANARYVKNLD 636
>gi|222150258|ref|YP_002559411.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
gi|222119380|dbj|BAH16715.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
Length = 642
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/619 (49%), Positives = 422/619 (68%), Gaps = 10/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYA ++EV + DN + V DNGRGIP+D+
Sbjct: 32 MYIGSTASKGLHHLVWEIVDNSIDEALAGYADHVEVTIEEDNWIKVTDNGRGIPVDIQKK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALS +LEV V +DG YHQ
Sbjct: 92 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSSTLEVYVHKDGKIYHQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P L + D+ GT IRF D ++FT ++++ + RIRELAFLN
Sbjct: 150 AYHRGVPAFDLKV----IGETDKTGTVIRFKADSEIFTETTEYEYEILQKRIRELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ + + K++ + ++ +++ Y + GG++ YV+ LN K+ L + + + D I ++++
Sbjct: 206 GIKLEI-KDEREQDEIRHDVYHYEGGIKSYVELLNKSKETLFPEPIYIHDNRDEIEVEIS 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ ++ YS +L YAN+I T +GGTH +G K +LTR +NS G K+K +K+ D LSGE
Sbjct: 265 IQY-NNGYSTNLLSYANNIHTYEGGTHEDGFKRALTRVINSYGVKNKLIKEADEKLSGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T I+S++ NP+FEGQTKT+LGN EVR++ D E +L +P + I+ K
Sbjct: 324 VREGITAIVSIKHGNPQFEGQTKTKLGNTEVRQITDNLFAENFERFLLENPPIARIIVEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAK+AR++ R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAK
Sbjct: 384 GIMASRARLAAKKAREVTRRKSGLEISSLPGKLADCSSKDPSISELYIVEGDSAGGSAKS 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKILNVE+ + N EI+++I A+G G+ GE F RYHKI+
Sbjct: 444 GRDSKTQAILPLRGKILNVEKARLDRILGNNEIRSMITAMGTGIGGE-FDISKARYHKIV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+KVE+GK+ Y Y++ EL K
Sbjct: 503 IMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKVEQGKKKYYVYNERELDK 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
++ P+ + + R+KGLGEM QLWETT+NPE R + Q+ + DA EA+ VF LMG
Sbjct: 563 LRKELPTTPKWQLARYKGLGEMNADQLWETTMNPEHRSMLQVTLSDAIEADEVFEMLMGD 622
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R+ I+ A N+D
Sbjct: 623 VVEHRRTFIEENAEYANVD 641
>gi|168183732|ref|ZP_02618396.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|237793326|ref|YP_002860878.1| DNA gyrase subunit B [Clostridium botulinum Ba4 str. 657]
gi|182673147|gb|EDT85108.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|229263377|gb|ACQ54410.1| DNA gyrase, B subunit [Clostridium botulinum Ba4 str. 657]
Length = 637
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/621 (51%), Positives = 439/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV + DNS++V D+GRG+P+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++T+LHAGGKFGG S LHGVG SVVNALSE V V RDG + Q
Sbjct: 89 VKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEHCNVEVRRDGHIWLQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T L V ++ GT+I F PD ++F ++F+++T+A R+RELAFLN
Sbjct: 147 KYERGIPKTGLDI----VGDTEKHGTKIYFKPDVEIFD-ELEFEYDTLAQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I+L E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A
Sbjct: 202 GIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+
Sbjct: 258 MQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDTDKNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K
Sbjct: 317 VREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQ
Sbjct: 377 GLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++II
Sbjct: 437 GRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFNLEKIRYNRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMKELVEEGHVYIAQPPLYRIYKAKKELYVYSDKELDE 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +IQR+KGLGEM P QLWETT+NPE R L Q+ IEDA A+ +F+ LMG
Sbjct: 556 ALLELGGKDTNTNIQRYKGLGEMDPEQLWETTMNPEHRTLLQVTIEDAMAADEIFTILMG 615
Query: 599 ARVDTRKELIQNAAN-LVNLD 618
+V+ R++ I+N A+ +VNLD
Sbjct: 616 TKVEPRRDFIENNADKVVNLD 636
>gi|42779086|ref|NP_976333.1| DNA gyrase subunit B [Bacillus cereus ATCC 10987]
gi|384177915|ref|YP_005563677.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402554403|ref|YP_006595674.1| DNA gyrase subunit B [Bacillus cereus FRI-35]
gi|42735001|gb|AAS38941.1| DNA gyrase, B subunit [Bacillus cereus ATCC 10987]
gi|324323999|gb|ADY19259.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401795613|gb|AFQ09472.1| DNA gyrase subunit B [Bacillus cereus FRI-35]
Length = 640
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|229199683|ref|ZP_04326326.1| DNA gyrase subunit B [Bacillus cereus m1293]
gi|228583778|gb|EEK41953.1| DNA gyrase subunit B [Bacillus cereus m1293]
Length = 640
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILAELPAQPKPGIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|190710601|gb|ACE95131.1| gyrase subunit B [Bacillus thuringiensis serovar neoleonensis]
Length = 627
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/615 (50%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQKNA 625
>gi|384209248|ref|YP_005594968.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
gi|343386898|gb|AEM22388.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
Length = 636
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/621 (48%), Positives = 413/621 (66%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY NI V + N + V D+GRGIP+D+HP
Sbjct: 27 MYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTIKKGNIIQVEDDGRGIPVDMHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q
Sbjct: 87 LKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVNKDGKLYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V V + + GT + F D ++F T + +D+ +A R+RELAFLN
Sbjct: 145 VYHRGIPEEP----VKEVGTSKKTGTTVTFKADDEIFETTV-YDYKILANRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L D + NE+++ GG+E ++ LN +KKPLHD + K+ D +++A
Sbjct: 200 GIRITLV--DEREAEVVSNEFYYEGGIEMFIAHLNENKKPLHDKPIYLHKNEDKTDVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE
Sbjct: 258 MQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKSKITFMGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGL ++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K
Sbjct: 317 TREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA +A AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK
Sbjct: 377 IISAAQAREAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKG 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++I
Sbjct: 437 GRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GASFDISKIRYGRVI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELK 538
I+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D +
Sbjct: 496 IMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFVYAYSDEQRD 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + + Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG
Sbjct: 556 KILAE-NKDKKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMG 614
Query: 599 ARVDTRKELIQNAANLV-NLD 618
V R++ I++ A V NLD
Sbjct: 615 DEVKPRRDFIESNARYVKNLD 635
>gi|325269651|ref|ZP_08136264.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
gi|324988019|gb|EGC19989.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
Length = 657
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/634 (48%), Positives = 427/634 (67%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV++ DNSV+V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVSINEDNSVTVEDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD +FTT + F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETDKTGTRQQFWPDAGIFTTTV-FQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + I I+
Sbjct: 204 GIKITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G + +LTRTL + SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRTALTRTLKAYADNDPQISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP+
Sbjct: 323 EIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KLICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEDEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY D + L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTDQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|375255406|ref|YP_005014573.1| DNA gyrase subunit B [Tannerella forsythia ATCC 43037]
gi|363408013|gb|AEW21699.1| DNA gyrase, B subunit [Tannerella forsythia ATCC 43037]
Length = 652
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 300/627 (47%), Positives = 416/627 (66%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG +GLHHLVYE++DN++DEA AG+ NIEV + DNS+ V D+GRGIP+D H
Sbjct: 33 MYIGDTGEKGLHHLVYEVVDNSIDEALAGFCKNIEVVINEDNSICVTDDGRGIPVDYHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L+ + R+G Y Q
Sbjct: 93 EGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSSHLKAEIHRNGKIYIQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+GKP+ + + DR GT I F PD VFT Q+ ++ +A R+RELAFLN
Sbjct: 151 EFSQGKPLGD----IRETGTIDRTGTIISFKPDDTVFTVT-QYKYDILANRLRELAFLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ + L + E + F GL+E+V++++ K+ + HDV+ + GI ++
Sbjct: 206 GIYLTLTDKREKKEDGSFKSEVFHSNEGLKEFVRYIDKSKESMIHDVIHIVTEKQGIPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G
Sbjct: 266 VAMTYNT-SYNESVFSYVNDINTIEGGTHLSGFRRGLTRTLKKYAEDSKLLEKAKVEIQG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD +V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDMAVGEALGYYLEEHPKEAKAIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS LPGKLADCSS E E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARQAARKAREMVQRKSPFSGGGLPGKLADCSSKDAAECELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----AL 473
KQGRDR FQAILPLRGKILNVE+ E ++ +EEIQN+ +A+G+ + ED KE L
Sbjct: 445 KQGRDRNFQAILPLRGKILNVEKAMEHRIFDSEEIQNIFKAMGVTIGTEDDPKELNLSKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RY KIII+TDADVDG+HI TL+LTFF+R + L ++G +Y+ PPLY ++GK +YC+
Sbjct: 505 RYQKIIIMTDADVDGSHIATLILTFFFRRMRGLIEKGYVYLATPPLYLCKKGKVEEYCWT 564
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + +K ++ I QR+KGLGEM QLW+TT+NPE R LKQ+ IE+A EA+
Sbjct: 565 EQQRQKFIDTYGGGNESQIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIENAVEADS 624
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
F+ LMG V R++ I+ A N+D
Sbjct: 625 TFAMLMGEDVAPRRDFIEENATYANID 651
>gi|145578019|gb|ABP82728.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar tolworthi]
Length = 632
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDETNVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|429124642|ref|ZP_19185174.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
gi|426279415|gb|EKV56438.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
Length = 636
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 410/621 (66%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY NI V + DN + V D+GRGIP+D+HP
Sbjct: 27 MYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTIEKDNIIKVEDDGRGIPVDMHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q
Sbjct: 87 LKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVRKDGKLYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V V + GT + F D +F T I +D+ +A R+RELAFLN
Sbjct: 145 VYHRGVPEEP----VKEVGTSTSNGTTVTFKADADIFETTI-YDYKILANRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L D + NE+++ GG+E ++ LN +KK LHD + K D +++A
Sbjct: 200 GIRITL--TDKREAEVVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKTEDKTDVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE
Sbjct: 258 MQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGL ++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K
Sbjct: 317 TREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA +A AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK
Sbjct: 377 IISAAQAREAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKG 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++I
Sbjct: 437 GRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GSSFDISKIRYGRVI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELK 538
I+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D +
Sbjct: 496 IMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFVYAYSDEQRD 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ S + Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG
Sbjct: 556 KILSE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMG 614
Query: 599 ARVDTRKELIQNAANLV-NLD 618
V R++ I++ A V NLD
Sbjct: 615 DEVKPRRDFIESNARYVKNLD 635
>gi|145578017|gb|ABP82727.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar tohokuensis]
Length = 632
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T++ R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLSTRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQA LPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQATLPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|402837518|ref|ZP_10886039.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
gi|402274977|gb|EJU24144.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
Length = 640
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/624 (49%), Positives = 434/624 (69%), Gaps = 20/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AG+ I V++ +N ++V DNGRGIP+++HP
Sbjct: 30 MYIGSTGSKGLHHLVYEVVDNAIDEALAGFCDKIYVSIDVNNGITVIDNGRGIPVEVHPK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V ++G Y Q
Sbjct: 90 TGKSTLETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKEGKIYKQ 147
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
++ G VT + TC + + GT I F PD+++F + + T+ R+RELA
Sbjct: 148 EFEYGNAVTDIKQIGTCPL------EETGTCISFLPDEKIFDETV-YSFETLEHRLRELA 200
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-T 235
FLN ++I L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG
Sbjct: 201 FLNKGISITL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYD 258
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
I++A+Q+ +DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD +
Sbjct: 259 IEIAMQY-TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENF 317
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE +REGLT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P
Sbjct: 318 TGEDIREGLTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARI 377
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K + + +A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGG
Sbjct: 378 IMEKCMRSQRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGG 437
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK+GR+ + QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRY
Sbjct: 438 SAKEGRNSQNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRY 496
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII++DADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y
Sbjct: 497 HKIIIMSDADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSPE 556
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
EL++ + + + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ FS
Sbjct: 557 ELEQKLNDIGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADETFSI 615
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ IQ A V NLD
Sbjct: 616 LMGDKVEPRRDFIQQNARYVENLD 639
>gi|163755890|ref|ZP_02163007.1| DNA gyrase, B subunit [Kordia algicida OT-1]
gi|161324061|gb|EDP95393.1| DNA gyrase, B subunit [Kordia algicida OT-1]
Length = 645
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 297/625 (47%), Positives = 424/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + DNS++ DNGRGIP+ +H
Sbjct: 29 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTISVIINEDNSITTEDNGRGIPVGIHEK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+RDG + Q
Sbjct: 89 KGVSALEVVMTEIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLRATVYRDGKIWEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V + D++GT + F PD +FT +++++ T+A R+REL++LN
Sbjct: 147 EYERGKALYP----VKAIGDSDKRGTVVTFKPDASIFTQTLEYNYETLANRMRELSYLNK 202
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L + + EK +Y E F + GL+E++++L+ +++ + DVV F + +GI ++
Sbjct: 203 GITITLTDKRNKDEKGEYIGEVFHSQEGLKEFIKYLDGNREQIIADVVAFEGEKNGIPVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +YS+ + Y N+I T +GGTH+ G + LT TL + + + +SG
Sbjct: 263 VAMTYNT-SYSENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKYAEGTGMLDKLKFDISG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE HPD +I+
Sbjct: 322 DDFREGLTAIISVKVAEPQFEGQTKTKLGNREVSASVSQAVSEMLTDYLEEHPDDAKTIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+A
Sbjct: 382 QKVVLAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQDPAKCEVFLVEGDSAGGTA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K L
Sbjct: 442 KQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKL 501
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+ DADVDG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + +Y ++
Sbjct: 502 RYHKIVIMCDADVDGSHIATLILTFFFRYMKELIENGHIYIAAPPLYLVKKGAKRRYAWN 561
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E + F A +IQR+KGLGEM QLW+TT+NP+ R L+Q++I++ EA+ VF
Sbjct: 562 DEERDAIIEEFGQGA--NIQRYKGLGEMNAEQLWDTTMNPDFRTLRQVMIDNGGEADRVF 619
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 620 SMLMGDEVPPRREFIEKNAVYANID 644
>gi|222093779|ref|YP_002527826.1| DNA gyrase subunit b [Bacillus cereus Q1]
gi|221237824|gb|ACM10534.1| DNA gyrase, B subunit [Bacillus cereus Q1]
Length = 640
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 EKILDELPAQPKPGIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|256419449|ref|YP_003120102.1| DNA gyrase subunit B [Chitinophaga pinensis DSM 2588]
gi|256034357|gb|ACU57901.1| DNA gyrase, B subunit [Chitinophaga pinensis DSM 2588]
Length = 659
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/631 (48%), Positives = 419/631 (66%), Gaps = 21/631 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY NI V + DNS+ V D+GRGIP +HP
Sbjct: 36 MYIGDIGVKGLHHLVYEVVDNSIDEALAGYCKNISVTICEDNSILVTDDGRGIPTGMHPK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF ++ Y VSGGLHGVG+S VNALS+ L VTV R+G + Q
Sbjct: 96 EGRSALEVVMTVLHAGGKFDKNT--YKVSGGLHGVGVSCVNALSDKLHVTVRREGKLFEQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + + D GT + F PD ++F I ++ +AGR+RELA+LN
Sbjct: 154 EYQRGVP----QYAVREIGTSDSTGTTVHFKPDNEIFKETI-YNREILAGRLRELAYLNR 208
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK-----PLHDVVGFRKDVDG 233
K+ I L + + D N E F++ GG+ E+VQ L+ + + P +
Sbjct: 209 KIKITLTDDREKDEAGNSVTETFYSEGGIIEFVQMLDRNGRRNGLLPDPIFIEAHDASSN 268
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ +++A+ + +D++S+ + Y N+I TI+GGTH+ G + ++TR S G K+K + I
Sbjct: 269 VAVEVAVIY-NDSFSENIFSYVNNINTIEGGTHVAGFRRAITRIFKSYGDKNKMFEKTKI 327
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++G+ REGL+ IISV+VP P+FEGQTKT+LGN +V VVD SV L YLE HP
Sbjct: 328 EVTGDDFREGLSAIISVKVPEPQFEGQTKTKLGNSDVMGVVDSSVAAVLDAYLEEHPREA 387
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I++K + A +A AA++AR +V++KSVL S LPGKLADCS PE+ E+++VEGDSA
Sbjct: 388 KIIINKVVLAAQAREAARKARQMVQRKSVLSGSGLPGKLADCSENDPEKCELYLVEGDSA 447
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK--- 470
GG+AKQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+ ALG+ + E+ K
Sbjct: 448 GGTAKQGRNRSFQAILPLRGKILNVEKAMEHKIYENEEIKNIFTALGVTIGTEEDDKALN 507
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
LRYHK+II+TDADVDG+HI TL+LTF +RY K + ++G +Y+ PPLY V++ K+
Sbjct: 508 LSKLRYHKLIIMTDADVDGSHIATLILTFIFRYMKAMVEQGYVYIAQPPLYLVKKSKEQI 567
Query: 530 YCYDDAELKKVKSSFPSNA--LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 587
Y + + + K + +IQR+KGLGEM QLWETT+NP+ R LKQ+ IE AA
Sbjct: 568 YAWTEEDRKAAIAKIAGGKEDSVTIQRYKGLGEMNAEQLWETTMNPDNRTLKQVTIESAA 627
Query: 588 EANVVFSSLMGARVDTRKELIQNAANLVNLD 618
EA+ VFS LMG V R+E I++ A +D
Sbjct: 628 EADRVFSMLMGDEVPPRREFIESHAKYAKID 658
>gi|340753204|ref|ZP_08689995.1| DNA gyrase, B subunit [Fusobacterium sp. 2_1_31]
gi|422315493|ref|ZP_16396925.1| DNA gyrase, B subunit [Fusobacterium periodonticum D10]
gi|340567084|gb|EEO39091.2| DNA gyrase, B subunit [Fusobacterium sp. 2_1_31]
gi|404592370|gb|EKA94208.1| DNA gyrase, B subunit [Fusobacterium periodonticum D10]
Length = 635
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 420/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKILPDNIIEVVDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G Y+Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKEGNVYYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ GT +RF D +F T + +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KIIGSCEASEHGTTVRFKADGDIFETLV-YNYFTLSNRLKELAYLNR 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D +K + Y F GG+ +++ + ++ + D + + D + +D+
Sbjct: 198 GLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEETTIIDKPFYVSAEQDNVGVDVT 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 256 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P + ++ K
Sbjct: 315 IREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPAITKIVVEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 435 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 494 LMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVASGKQIIYAYNDLELKN 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 554 ILAQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 613
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 614 DKVEPRREFIEEHAEYVKNID 634
>gi|190710553|gb|ACE95107.1| gyrase subunit B [Bacillus thuringiensis serovar kyushuensis]
Length = 627
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/615 (50%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|57233676|ref|YP_180759.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
gi|57224124|gb|AAW39181.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
Length = 642
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 419/620 (67%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + D SVSV DNGRGIPID+HP
Sbjct: 36 MYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVIIYKDGSVSVEDNGRGIPIDIHPV 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALETV+TVLHAG KFGG + Y VSGGLHGVG SVVNAL+E V V R+G Y Q
Sbjct: 96 TKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALAEWTTVKVRRNGKIYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP T L V D GT F D Q+F+T ++D T+ R+RE+A+LN
Sbjct: 154 SYQRGKPSTPLE----EVGVSDGSGTTTIFKADSQIFSTT-EYDFETLTDRLREIAYLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + + E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A
Sbjct: 209 GLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR N KSK +KD D +L G+
Sbjct: 265 IQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+ I+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K
Sbjct: 324 VREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVESAVTEQLSLYLEEHPDDTKRILEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A KA AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQ
Sbjct: 384 CITAAKAREAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++
Sbjct: 444 GRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGIDN-DFDPAKLRYNRLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE +
Sbjct: 503 LMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSNEHWVYNDAEKET 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S SN + IQR+KGLGEM QLW+TT++P R L ++ +EDAA+A+ +F+ LMG
Sbjct: 563 LLSQTKSNKV-DIQRYKGLGEMSAEQLWKTTMDPASRTLLEVKVEDAAKADQIFNLLMGG 621
Query: 600 RVDTRKELIQNAANLV-NLD 618
V RK IQ+ + V NLD
Sbjct: 622 EVAPRKAFIQSHSKTVKNLD 641
>gi|424835717|ref|ZP_18260376.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
gi|365977587|gb|EHN13685.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
Length = 637
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/621 (51%), Positives = 439/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV + DNS++V D+GRG+P+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++T+LHAGGKFGG S LHGVG SVVNALSE V V RDG + Q
Sbjct: 89 VKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEHCNVEVRRDGHIWLQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T L V ++ GT+I F PD ++F ++F+++T+A R+RELAFLN
Sbjct: 147 KYERGIPKTGLDI----VGDTEKHGTKIYFKPDVEIFD-ELEFEYDTLAQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I+L E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A
Sbjct: 202 GIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+
Sbjct: 258 MQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDIDKNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K
Sbjct: 317 VREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQ
Sbjct: 377 GLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++II
Sbjct: 437 GRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFNLEKIRYNRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIYKAKKELYVYSDKELDE 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +IQR+KGLGEM P QLWETT+NPE R L Q+ IEDA A+ +F+ LMG
Sbjct: 556 ALLELGGKDTNTNIQRYKGLGEMDPEQLWETTMNPEHRTLLQVTIEDAMAADEIFTILMG 615
Query: 599 ARVDTRKELIQNAAN-LVNLD 618
+V+ R++ I+N A+ +VNLD
Sbjct: 616 TKVEPRRDFIENNADKVVNLD 636
>gi|404406489|ref|YP_006689204.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2376]
gi|422810893|ref|ZP_16859304.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-208]
gi|378751098|gb|EHY61689.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-208]
gi|404240638|emb|CBY62038.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2376]
Length = 646
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 423/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+FT +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQV+Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQVEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R++ I++ A V NLD
Sbjct: 626 RVEPRRKFIEDNAQYVKNLD 645
>gi|335048216|ref|ZP_08541236.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
gi|333758016|gb|EGL35574.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
Length = 638
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/624 (49%), Positives = 431/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AG I V + DNSV V DNG GIP+++HP
Sbjct: 29 MYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTIFEDNSVRVEDNGSGIPVEVHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+SVVNALSE L V RDG Y Q
Sbjct: 89 TGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVSVVNALSEWLIANVKRDGKLYEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++SRG + L V + GT I F PD ++F T I ++ + R RE+AFLN
Sbjct: 147 QFSRGNATSKLEV----VGTSKETGTIITFKPDSEIFDTTI-YEKEILRNRFREMAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDL 238
+ I E D + E F + GG++ +V+++N +K LH +V+ F+ +++
Sbjct: 202 GVKIIFTDERED-----FTETFHYEGGIKSFVEYMNRNKNSLHSEVIYFQGQRGDSQVEI 256
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
++Q+ +D YS+ +L +AN+I T +GG+H+ G K +LTRTLN G+K +KDKD +L G+
Sbjct: 257 SMQY-TDGYSENVLTFANNIHTPEGGSHLVGFKTALTRTLNDYGRKYNLIKDKDANLQGD 315
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT I+S+++PNP+FEGQTK +LGN E R +V+ + + L +LE +P V I+
Sbjct: 316 DTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVEAFLYDNLMTFLEENPKVGKIIIE 375
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC + +EI++VEGDSAGGSAK
Sbjct: 376 KAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQESDISVNEIYLVEGDSAGGSAK 435
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRD +FQA+LPL+GKI+NVE+ + EEI+++I A G G+ G+DF + LRY KI
Sbjct: 436 QGRDSKFQAVLPLKGKIMNVEKARIDKILGYEEIKSMITAFGTGI-GKDFNLDNLRYGKI 494
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAEL 537
+I+TDADVDGAHIRTL+LTFFYRY K L ++G +Y+ PPLY + +G K V+YC+ D EL
Sbjct: 495 VIMTDADVDGAHIRTLILTFFYRYMKELIEQGHVYIAQPPLYGIIKGVKVVKYCWTDEEL 554
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV--VFSS 595
+ ++ + IQR+KGLGEM P QLWETT+NPE R+ Q+ I+D ++ FS+
Sbjct: 555 QASLDELGRDS-HRIQRYKGLGEMNPAQLWETTMNPENRLFLQVNIDDEELVSIDETFST 613
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+E I QNA + N+D
Sbjct: 614 LMGDKVEPRREFIEQNAKYVENID 637
>gi|145218835|ref|YP_001129544.1| DNA gyrase subunit B [Chlorobium phaeovibrioides DSM 265]
gi|145204999|gb|ABP36042.1| DNA gyrase subunit B [Chlorobium phaeovibrioides DSM 265]
Length = 642
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/621 (49%), Positives = 418/621 (67%), Gaps = 23/621 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHL+YEI+DN++DE GY I V+L D SV+V D+GRGIP+D+HP
Sbjct: 34 MYIGDIHSRGLHHLIYEIVDNSIDETLGGYNDYIFVSLNPDGSVTVIDHGRGIPVDIHPD 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T++ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG + Q
Sbjct: 94 KKKSALELVMTLIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAWFQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + + +GT+ F PD ++F +F + I R+RELAFLN
Sbjct: 152 RYHRGVP----EGDVKEIGATSERGTKTTFMPDPEIFKVT-EFRKDIIIDRMRELAFLNS 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGIT 235
L I ++ + + E + F GGL+E+V + LN K+P++ + G + D
Sbjct: 207 NLKIVVQDIEGEQET-----FHFEGGLKEFVLFTDANRLNLIKEPVY-IYG---EKDSTI 257
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLNS +K+ +K+ ++L
Sbjct: 258 VEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNSYAQKNDLLKNLKLAL 316
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ + E L+++ E +P+V+
Sbjct: 317 TGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESVLNEQLSDFAESNPNVIKM 376
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGG
Sbjct: 377 IIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGG 436
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR FQAILPL+GKILNVE+ + +NEEI+ +I ALG E+F +E LRY
Sbjct: 437 SAKQGRDRSFQAILPLKGKILNVEKARLHKLLENEEIKTIILALGTNFGEEEFSQEKLRY 496
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KIII+TDADVDGAHIRTLLLTFF+R+ ++L + G +Y+ PPLY V+ GK QY +DD
Sbjct: 497 GKIIIMTDADVDGAHIRTLLLTFFFRHMRSLIEAGKVYIAQPPLYLVKAGKDQQYAWDDE 556
Query: 536 ELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
E + A IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS
Sbjct: 557 ERNSIADMMRKGKANVHIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVSVENAMEADKVFS 616
Query: 595 SLMGARVDTRKELIQNAANLV 615
+LMG +V+ R+E I+ A V
Sbjct: 617 TLMGDKVEPRREFIEKNARYV 637
>gi|325102923|ref|YP_004272577.1| DNA gyrase subunit B [Pedobacter saltans DSM 12145]
gi|324971771|gb|ADY50755.1| DNA gyrase subunit B [Pedobacter saltans DSM 12145]
Length = 652
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/629 (48%), Positives = 433/629 (68%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG +GLHHLVYE++DN++DEA AGY ++I V + +NS++V DNGRGIP ++
Sbjct: 31 MYIGDTGVKGLHHLVYEVVDNSIDEALAGYCTDILVTIHKNNSITVEDNGRGIPTGINKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS + V R+G + Q
Sbjct: 91 ENKSALEIVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHVITVVHREGKIFTQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP+ V + DR GT F PD ++FT ++ +T+AGR+RELAFLN
Sbjct: 149 EYERGKPL----FDVKVIGESDRTGTIQTFQPDPEIFTQTTEYRFDTLAGRLRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ + L E E + E++ GGL E+V +L++ + PL D + + +GI ++
Sbjct: 205 GIRLVLTDEREVKEDGSFLSEEFYSEGGLREFVTFLDSTRTPLIPDAIYIEGEKNGIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
LA + +++Y++ + Y N+I TI+GG+H+ G + LTRTL S +KS +K+ + ++G
Sbjct: 265 LAFTY-NNSYNENIHSYVNNINTIEGGSHVAGFRRGLTRTLKSYAEKSGLLKNLKVEITG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L +LE +P I+
Sbjct: 324 DDFREGLTAVISVKVQEPQFEGQTKTKLGNTEVTGAVDIAVGEALGNFLEENPKEAKLIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K + A A AA++AR++V++K+V+ S LPGKLADC++ P E+F+VEGDSAGG+A
Sbjct: 384 NKVILAATARAAARKAREMVQRKNVMGGSGLPGKLADCANKDPHVCELFLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EAL 473
KQGR+R FQAILPL+GKILNVE+ E +Y+N+EI+N+ ALG+ + ED K+ E L
Sbjct: 444 KQGRNRDFQAILPLKGKILNVEKAMEHKIYENDEIKNIFTALGVSIGTAEDEKELNLEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+RY K L + G IY+ PPLY+V++GK+ +YC++
Sbjct: 504 RYHKVIIMTDADVDGSHITTLILTFFFRYMKQLIEAGNIYIAAPPLYQVKKGKEFEYCWN 563
Query: 534 ----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
DA ++++K ++++ IQR+KGLGEM QLWETTLNPE R LK+ IE AAEA
Sbjct: 564 DVQRDAAVQRLKGGGKEDSVH-IQRYKGLGEMNAEQLWETTLNPETRTLKRATIESAAEA 622
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A +D
Sbjct: 623 DRIFSMLMGDEVAPRREFIEKNARYAKID 651
>gi|169351628|ref|ZP_02868566.1| hypothetical protein CLOSPI_02409 [Clostridium spiroforme DSM 1552]
gi|169291850|gb|EDS73983.1| DNA gyrase, B subunit [Clostridium spiroforme DSM 1552]
Length = 641
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/621 (51%), Positives = 427/621 (68%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN++DEA AGYAS+I V L D+ V V D+GRG+P H
Sbjct: 30 MYIGTTSIRGLHHLVWEIVDNSIDEALAGYASHIRVILKDDDVVQVIDDGRGMPTGTHAK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ET+ TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG Y+Q
Sbjct: 90 TGISTVETIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVNVHRDGHVYYQ 147
Query: 121 KYSRG-KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ G +PV L V D GT + F DK +F +D++T+ RIRELAFLN
Sbjct: 148 RFENGGQPVDKLKV----VGDSDITGTIVTFKADKLIFKEGTVYDYDTLNQRIRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDL 238
L ++L ED N+ Y + GG++EYV ++N +K P+H+ + + +D+ ITI++
Sbjct: 204 KGLRLSL--EDQRNGINRKQVYHYEGGIKEYVSFINKNKTPIHEEIIYVEDIQQDITIEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +D Y + + N+I T +GGTH EG + +LTR +N+ K +K D +LSG+
Sbjct: 262 AMQY-NDGYQSNIYSFCNNINTHEGGTHEEGFRMALTRVINNYAKNKGLLKKDDETLSGD 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT IISV+ P+P++EGQTKT+LGN EVRK+ + L ++L +PD I+
Sbjct: 321 DVREGLTAIISVKHPDPQYEGQTKTKLGNAEVRKIASNIIATSLDKFLLENPDTAKIIVD 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A +AAK+AR++ R+K+ L S+LPGKLADCSS P E EIFIVEGDSAGGSAK
Sbjct: 381 KAIIASRARMAAKKAREMTRRKNPLEVSNLPGKLADCSSKDPSECEIFIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR QAILPLRGKILNVE+ + N EI+++I A G G+ GE+F + LRYHKI
Sbjct: 441 MGRDRRIQAILPLRGKILNVEKSRLEKILGNAEIRSMITAFGTGI-GEEFNLDKLRYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG HIR L+LTF YRY K L + G +Y PPLY ++ GK+ YCY D EL+
Sbjct: 500 VIMTDADVDGGHIRILMLTFLYRYLKPLIENGFVYAAQPPLYLLKHGKEEHYCYSDEELE 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+K+ S A YSIQR+KGLGEM QLWETT++P++R+L Q+ +++A EA+++F LMG
Sbjct: 560 DLKTKIGSGAKYSIQRYKGLGEMNADQLWETTMDPQKRILNQIDLDEAMEADMIFDMLMG 619
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ NA + +LD
Sbjct: 620 EKVEPRREFIQENAKYVTDLD 640
>gi|190710547|gb|ACE95104.1| gyrase subunit B [Bacillus thuringiensis serovar alesti]
Length = 627
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/613 (50%), Positives = 422/613 (68%), Gaps = 12/613 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ + + ED K Q E+ + GG++ YV+ LN K+P+H+ V DGI +++A
Sbjct: 198 NIKLTI--EDKRGHK-QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVA 254
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE
Sbjct: 255 LQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGED 313
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K
Sbjct: 314 VREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDK 373
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQ
Sbjct: 374 GTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQ 433
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+I
Sbjct: 434 GRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVI 492
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K
Sbjct: 493 IMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEK 552
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG
Sbjct: 553 ILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGD 612
Query: 600 RVDTRKELIQNAA 612
+V+ R+ IQ A
Sbjct: 613 KVEPRRNFIQENA 625
>gi|429765449|ref|ZP_19297743.1| DNA gyrase, B subunit [Clostridium celatum DSM 1785]
gi|429186362|gb|EKY27309.1| DNA gyrase, B subunit [Clostridium celatum DSM 1785]
Length = 638
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/621 (51%), Positives = 438/621 (70%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLVYEI+DN++DEA AG+ NI+V + DNS++V D+GRG+P+ LHP
Sbjct: 29 MYIGTTSSRGLHHLVYEIVDNSIDEALAGFCKNIKVTINEDNSITVIDDGRGMPVGLHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E ++TVLHAGGKFGG S LHGVG SVVNALSE EVTV R+G + Q
Sbjct: 89 MGKSTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEYCEVTVTREGYVWQQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG + C + + D GT++ F PD ++F T +F+ ++ R+RELAFLN
Sbjct: 147 KYSRG----NVLCDLTKIGEDDGHGTKVVFKPDHEIFETT-EFEFEILSSRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L + E+ + +Y + GG++E+V +LN +K+ LH+ + + DGI ++A
Sbjct: 202 GICITLEDKRE--EEEKIEKYHYEGGIKEFVSYLNRNKEVLHESPIYVEGEKDGIIAEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I TI+GGTH+ G K++LTR +N K+ +K+ D +LSG+
Sbjct: 260 LQY-NDGYNENLYSFANNIDTIEGGTHLAGFKSALTRAINDYAKRFGHIKENDKNLSGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT +ISV++ P+FEGQTKT+LGN EVR VVD V E ++ +LE +P V I+ K
Sbjct: 319 AREGLTAVISVKISEPQFEGQTKTKLGNSEVRGVVDSIVAEGVSIFLEENPAVGKIIIDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R KSVL S+LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 379 ALMAARARDAARKARELTR-KSVLERSTLPGKLADCSSKDPAECEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKILNVE++ + ++ I+++I A G G+ G+DF +E LRY++II
Sbjct: 438 GRDRKFQAILPLRGKILNVEKQRLDRILNSDTIRSMITAFGAGI-GKDFDEEKLRYNRII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D G +Y+ PPLYKV +GK+ Y Y D EL
Sbjct: 497 IMTDADVDGAHIRTLLLTFFYRYMRPLIDGGHVYIAQPPLYKVSKGKKESYAYTDEELDS 556
Query: 540 VKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ F + +IQR+KGLGEM QLW+TT++PE R+LK+ + DA A+ +F+ LMG
Sbjct: 557 ILEEFGGKDNSTNIQRYKGLGEMNATQLWDTTMDPEHRILKKASVSDAIAADEIFTILMG 616
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ NA+ + NLD
Sbjct: 617 DKVEPRREFIQKNASKISNLD 637
>gi|217965929|ref|YP_002351607.1| DNA gyrase subunit B [Listeria monocytogenes HCC23]
gi|386006719|ref|YP_005924997.1| DNA gyrase subunit B [Listeria monocytogenes L99]
gi|386025294|ref|YP_005946070.1| DNA gyrase subunit B [Listeria monocytogenes M7]
gi|217335199|gb|ACK40993.1| DNA gyrase, B subunit [Listeria monocytogenes HCC23]
gi|307569529|emb|CAR82708.1| DNA gyrase, B subunit [Listeria monocytogenes L99]
gi|336021875|gb|AEH91012.1| DNA gyrase subunit B [Listeria monocytogenes M7]
Length = 646
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 422/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+FT +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQV+Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQVEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + YSIQR+KGLGEM P QLW TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDGDTKYSIQRYKGLGEMNPEQLWNTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R++ I++ A V NLD
Sbjct: 626 RVEPRRKFIEDNAQYVKNLD 645
>gi|190710597|gb|ACE95129.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIQYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|145577975|gb|ABP82706.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar entomocidus]
Length = 632
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E +RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKVRYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++ A EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQGAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|269925173|ref|YP_003321796.1| DNA gyrase subunit B [Thermobaculum terrenum ATCC BAA-798]
gi|269788833|gb|ACZ40974.1| DNA gyrase, B subunit [Thermobaculum terrenum ATCC BAA-798]
Length = 640
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/621 (50%), Positives = 422/621 (67%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHL+YEI+DN+VDE+ AGY IEV + D SV+V DNGRGIP+ +HP
Sbjct: 32 MYIGSTDVRGLHHLIYEIVDNSVDESMAGYCDFIEVHIHKDKSVTVRDNGRGIPVGIHPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKFG S GY VSGGLHGVG SVVNALSE L V R+G + Q
Sbjct: 92 LKKSALEVVMTVLHAGGKFG--SGGYKVSGGLHGVGASVVNALSEYLIAEVHREGKIWRQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T + + DR GT I F PD +F+T +++ +T+A R RE+A+LN
Sbjct: 150 SYERGVPKTPVEA----IGDTDRTGTIITFKPDADLFST-LEYQFDTLAQRFREIAYLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I + D E Y F GG+ +V+ LN ++ L + + K ++GI +++A
Sbjct: 205 GLKITFIDDRDDKELTLY----FEGGIASFVRHLNKNRNVLTEKPIYIHKQLNGIDVEVA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D +++++ + N+I T+DGGTH+ G + +LTRTLN K+ +KD D L+GE
Sbjct: 261 IQY-TDGFNESLHTFTNNINTVDGGTHLTGFRTALTRTLNDYAVKNGLLKDSDTKLTGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV++P+P+FEGQTK++LG+ E +VV V++ L Y + +P I+ K
Sbjct: 320 VREGLTAVVSVKLPDPQFEGQTKSKLGSSEAERVVASVVRDGLLSYFDENPSDAKRIIEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A +A AA++ARDLV +K L +LPGKLADCS P SE++IVEGDSAGGSAKQ
Sbjct: 380 AITAARAREAARKARDLVVRKGALDGMTLPGKLADCSERDPRHSELYIVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ M + EI+ LI ALG G+ G+ F LRYH+I
Sbjct: 440 GRDRRFQAILPLRGKILNVEKARLDKMLSSAEIKALITALGTGI-GDSFDISKLRYHRIF 498
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFF+R+ + G +Y+ +PPLYK++ GK+ + Y D E +
Sbjct: 499 LMTDADVDGAHIRTLLLTFFFRHMPDIIKNGHLYIAMPPLYKIQVGKEKYFVYSDEERDR 558
Query: 540 VKSSFPSNALYS-IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + N + IQR+KGLGEM P QLWETT++P R + Q+ IEDA +A+ +F LMG
Sbjct: 559 VLAGLNGNRSKAIIQRYKGLGEMNPEQLWETTMDPSTRTIMQVTIEDAVKADELFDMLMG 618
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+ V RK+ IQ+ A V NLD
Sbjct: 619 SNVAPRKKFIQSHAKSVRNLD 639
>gi|145577985|gb|ABP82711.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar thompsoni]
Length = 632
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++L + ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLSY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|357043575|ref|ZP_09105266.1| DNA gyrase, B subunit [Prevotella histicola F0411]
gi|355368239|gb|EHG15660.1| DNA gyrase, B subunit [Prevotella histicola F0411]
Length = 658
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/635 (47%), Positives = 428/635 (67%), Gaps = 25/635 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV + DNS++V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTINEDNSITVEDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEIVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + + D+ GTR +FWPD +FTT + F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----IGETDKTGTRQQFWPDGDIFTTTV-FQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + GI I+
Sbjct: 204 GIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQGIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKAYADNDPQISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+
Sbjct: 323 EITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKE 471
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ + + E
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEESEGEFE 502
Query: 472 A----LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
A LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 ANIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTFKKV 562
Query: 528 VQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
+YCY + + L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ I
Sbjct: 563 SEYCYTEQQRQAFLDKYGNGTEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTI 622
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AA+A+ +FS LMG V+ R++ I+ A N+D
Sbjct: 623 ENAADADEIFSMLMGDDVEPRRDFIEKNATYANID 657
>gi|190710581|gb|ACE95121.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
Length = 627
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/615 (51%), Positives = 423/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNSIQENA 625
>gi|16802054|ref|NP_463539.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e]
gi|46906230|ref|YP_012619.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093016|ref|ZP_00230795.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858]
gi|47097288|ref|ZP_00234846.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854]
gi|226222645|ref|YP_002756752.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824774|ref|ZP_05229775.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194]
gi|254827430|ref|ZP_05232117.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254851836|ref|ZP_05241184.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503]
gi|254913117|ref|ZP_05263129.1| DNA gyrase subunit B [Listeria monocytogenes J2818]
gi|254930863|ref|ZP_05264222.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262]
gi|254937498|ref|ZP_05269195.1| DNA gyrase subunit B [Listeria monocytogenes F6900]
gi|254994017|ref|ZP_05276207.1| DNA gyrase subunit B [Listeria monocytogenes FSL J2-064]
gi|255520064|ref|ZP_05387301.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-175]
gi|284803260|ref|YP_003415125.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578]
gi|284996401|ref|YP_003418169.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923]
gi|300763380|ref|ZP_07073378.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017]
gi|386042353|ref|YP_005961158.1| DNA gyrase subunit B [Listeria monocytogenes 10403S]
gi|386045640|ref|YP_005963972.1| B subunit [Listeria monocytogenes J0161]
gi|386048936|ref|YP_005966927.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-561]
gi|386052279|ref|YP_005969837.1| DNA gyrase subunit B [Listeria monocytogenes Finland 1998]
gi|386730767|ref|YP_006204263.1| DNA gyrase subunit B [Listeria monocytogenes 07PF0776]
gi|404279558|ref|YP_006680456.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2755]
gi|404282436|ref|YP_006683333.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2372]
gi|404285373|ref|YP_006691959.1| DNA gyrase subunit B [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404409245|ref|YP_006694833.1| DNA gyrase subunit B [Listeria monocytogenes SLCC5850]
gi|404412112|ref|YP_006697699.1| DNA gyrase subunit B [Listeria monocytogenes SLCC7179]
gi|405748341|ref|YP_006671807.1| DNA gyrase subunit B [Listeria monocytogenes ATCC 19117]
gi|405751210|ref|YP_006674675.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2378]
gi|405754085|ref|YP_006677549.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2540]
gi|405756993|ref|YP_006686269.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2479]
gi|406702781|ref|YP_006753135.1| DNA gyrase, B subunit [Listeria monocytogenes L312]
gi|417314056|ref|ZP_12100762.1| DNA gyrase subunit B [Listeria monocytogenes J1816]
gi|424712856|ref|YP_007013571.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
LL195]
gi|424821659|ref|ZP_18246672.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A]
gi|21328234|gb|AAM48481.1|AF084042_1 DNA gyrase subunit B [Listeria monocytogenes]
gi|16409365|emb|CAC98221.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e]
gi|46879494|gb|AAT02796.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 4b str.
F2365]
gi|47014333|gb|EAL05308.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854]
gi|47018584|gb|EAL09338.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858]
gi|225875107|emb|CAS03795.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258599808|gb|EEW13133.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258605128|gb|EEW17736.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503]
gi|258610100|gb|EEW22708.1| DNA gyrase subunit B [Listeria monocytogenes F6900]
gi|284058822|gb|ADB69763.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578]
gi|284061868|gb|ADB72807.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923]
gi|293582408|gb|EFF94440.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262]
gi|293591119|gb|EFF99453.1| DNA gyrase subunit B [Listeria monocytogenes J2818]
gi|293594013|gb|EFG01774.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194]
gi|300515657|gb|EFK42706.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017]
gi|328468327|gb|EGF39333.1| DNA gyrase subunit B [Listeria monocytogenes J1816]
gi|332310339|gb|EGJ23434.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A]
gi|345532631|gb|AEO02072.1| B subunit [Listeria monocytogenes J0161]
gi|345535587|gb|AEO05027.1| DNA gyrase, B subunit [Listeria monocytogenes 10403S]
gi|346422782|gb|AEO24307.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-561]
gi|346644930|gb|AEO37555.1| DNA gyrase, B subunit [Listeria monocytogenes Finland 1998]
gi|384389525|gb|AFH78595.1| DNA gyrase subunit B [Listeria monocytogenes 07PF0776]
gi|404217541|emb|CBY68905.1| DNA gyrase, B subunit [Listeria monocytogenes ATCC 19117]
gi|404220410|emb|CBY71773.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2378]
gi|404223285|emb|CBY74647.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2540]
gi|404226193|emb|CBY47598.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2755]
gi|404229071|emb|CBY50475.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC5850]
gi|404231938|emb|CBY53341.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2372]
gi|404234875|emb|CBY56277.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2479]
gi|404237811|emb|CBY59212.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC7179]
gi|404244302|emb|CBY02527.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406359811|emb|CBY66084.1| DNA gyrase, B subunit [Listeria monocytogenes L312]
gi|424012040|emb|CCO62580.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
LL195]
gi|441469553|emb|CCQ19308.1| DNA gyrase subunit B [Listeria monocytogenes]
gi|441472685|emb|CCQ22439.1| DNA gyrase subunit B [Listeria monocytogenes N53-1]
Length = 646
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 423/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+FT +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R++ I++ A V NLD
Sbjct: 626 RVEPRRKFIEDNAQYVKNLD 645
>gi|188588443|ref|YP_001919471.1| DNA gyrase subunit B [Clostridium botulinum E3 str. Alaska E43]
gi|251778873|ref|ZP_04821793.1| DNA gyrase, B subunit [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188498724|gb|ACD51860.1| DNA gyrase, B subunit [Clostridium botulinum E3 str. Alaska E43]
gi|243083188|gb|EES49078.1| DNA gyrase, B subunit [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 635
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 440/622 (70%), Gaps = 19/622 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNS++ +D+GRG+P+ +HP
Sbjct: 28 MYIGSTSARGLHHLVYEIVDNSIDEALAGYCKNIKVKINKDNSITSSDDGRGMPVGMHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSA+E ++T+LHAGGKFGG S LHGVG SVVNALSE VTV R+G + Q
Sbjct: 88 MHKSAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCIVTVKREGHIWQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS+GK + L + + GT I F PD ++F ++FD +T++ R+RELAFLN
Sbjct: 146 EYSKGKVLYDLK----QIGDTEESGTTIYFKPDAEIFD-EVEFDFDTLSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I L D E+N Y++ GG++ +V +LN +K PLH + + + D +T++L
Sbjct: 201 GINITLIDCRDDREEN----YYYEGGIKSFVAYLNRNKTPLHPEPIYVEGIKDKVTVELG 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I TI+GGTH+ G K +LTR N K+ +K+ D + SG+
Sbjct: 257 LQY-NDGYTENLFSFANNIDTIEGGTHLVGFKTALTRAFNDYAKRFGFIKENDKNFSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV++ +P+FEGQTKT+LGN EV+ +VD V EY+ +LE +P I+ K
Sbjct: 316 IREGLTAVISVKIEDPQFEGQTKTKLGNSEVKGIVDSIVSEYIGIFLEENPGTSKIIIDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R KSVL ++LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 376 ALMAARAREAARKARELTR-KSVLERTTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKI+NVE++ + +E I++++ A G G+ G+DF E +RY++II
Sbjct: 435 GRDRKFQAILPLRGKIMNVEKQRLDKILNSETIRSMVTAFGGGI-GKDFDIEKIRYNRII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPL++V +GK+ Y Y DAEL +
Sbjct: 494 IMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLFRVGKGKKETYAYSDAELDQ 553
Query: 540 VKSSF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
V N++ IQR+KGLGEM QLW+TT++P +R+L + IEDA A+ +F+ LM
Sbjct: 554 VLQDMGGKDNSV-DIQRYKGLGEMNATQLWDTTMDPSKRILLKAEIEDAMAADEIFTILM 612
Query: 598 GARVDTRKELI-QNAANLVNLD 618
G +V+ R+E I QNA N+VNLD
Sbjct: 613 GEKVEPRREFIEQNAKNVVNLD 634
>gi|190710569|gb|ACE95115.1| gyrase subunit B [Bacillus thuringiensis serovar alesti]
Length = 627
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++T LHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTALHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|187934052|ref|YP_001884271.1| DNA gyrase subunit B [Clostridium botulinum B str. Eklund 17B]
gi|187722205|gb|ACD23426.1| DNA gyrase, B subunit [Clostridium botulinum B str. Eklund 17B]
Length = 635
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/621 (50%), Positives = 440/621 (70%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NIEV + DNS++ +D+GRG+P+ +HP
Sbjct: 28 MYIGSTSARGLHHLVYEIVDNSIDEALAGYCKNIEVKINKDNSITSSDDGRGMPVGMHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSA+E ++T+LHAGGKFGG S LHGVG SVVNALSE VTV R+G + Q
Sbjct: 88 MHKSAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCIVTVKREGHIWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS+GK + L + + + GT I F PD ++F + FD +T++ R+RELAFLN
Sbjct: 146 EYSKGKVLYDLK----QIGNTEESGTTIYFKPDAEIFDEVL-FDFDTLSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I L +D E+N Y++ GG++ +V +LN +K PLH + + + D +T++L
Sbjct: 201 GINIKLIDSRNDREEN----YYYEGGIKSFVSYLNRNKTPLHPEPIYVEGIKDKVTVELG 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I TI+GGTH+ G K +LTR N K+ +K+ D + SG+
Sbjct: 257 LQY-NDGYTENLFSFANNIDTIEGGTHLVGFKTALTRAFNDYAKRFGFIKENDKNFSGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV++ +P+FEGQTKT+LGN EV+ +VD V EY+ +LE +P + I+ K
Sbjct: 316 IREGLTAVISVKIEDPQFEGQTKTKLGNSEVKGIVDSIVSEYIGIFLEENPGISKIIIDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R KSVL ++LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 376 ALMAARAREAARKARELTR-KSVLERTTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPLRGKI+NVE++ + +E I++++ A G G+ G+DF E +RY++II
Sbjct: 435 GRDRKFQAILPLRGKIMNVEKQRLDKILNSETIRSMVTAFGGGI-GKDFDIEKIRYNRII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPL++V +GK+ Y Y D+EL +
Sbjct: 494 IMTDADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLFRVGKGKKEVYAYSDSELDQ 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + IQR+KGLGEM QLW+TT++P +R+L + IEDA A+ +F+ LMG
Sbjct: 554 VLLDMGGKDTSVDIQRYKGLGEMNATQLWDTTMDPAKRILLKAEIEDAMAADEIFTILMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ R+E I QNA N+VNLD
Sbjct: 614 EKVEPRREFIEQNAKNVVNLD 634
>gi|225619544|ref|YP_002720801.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
gi|10644698|gb|AAG21374.1|AF288224_1 DNA Gyrase B subunit [Brachyspira hyodysenteriae]
gi|225214363|gb|ACN83097.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
Length = 636
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/621 (48%), Positives = 413/621 (66%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY NI V + N + V D+GRGIP+D+HP
Sbjct: 27 MYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTIKKGNIIQVEDDGRGIPVDMHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q
Sbjct: 87 LKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVNKDGKLYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V V + + GT + F D ++F T + +D+ +A R+RELAFLN
Sbjct: 145 VYHRGIPEEP----VKEVGTSKKTGTTVTFKADDEIFETTV-YDYKILANRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L+ D + NE+++ GG+E ++ LN +KK LHD + K+ D +++A
Sbjct: 200 GIRITLK--DEREAEVVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKNEDKTDVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE
Sbjct: 258 MQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGL ++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K
Sbjct: 317 TREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA +A AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK
Sbjct: 377 IISAAQAREAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKG 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++I
Sbjct: 437 GRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GASFDISKIRYGRVI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELK 538
I+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D +
Sbjct: 496 IMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFLYAYSDEQRD 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ + + Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG
Sbjct: 556 KILAE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMG 614
Query: 599 ARVDTRKELIQNAANLV-NLD 618
V R++ I++ A V NLD
Sbjct: 615 DEVKPRRDFIESNARYVKNLD 635
>gi|190710577|gb|ACE95119.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|187777362|ref|ZP_02993835.1| hypothetical protein CLOSPO_00918 [Clostridium sporogenes ATCC
15579]
gi|187774290|gb|EDU38092.1| DNA gyrase, B subunit [Clostridium sporogenes ATCC 15579]
Length = 637
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/621 (51%), Positives = 438/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV + DNS++V D+GRG+P+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++T+LHAGGKFGG S LHGVG SVVNALSE V V RDG + Q
Sbjct: 89 VKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEHCNVEVRRDGHIWLQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN
Sbjct: 147 KYERGIPKTGLDI----VGDTEDHGTKIYFKPDVEIFD-ELEFEYDTLAQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I+L E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A
Sbjct: 202 GIKISLTDERYDKQEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+
Sbjct: 258 MQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDTDKNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K
Sbjct: 317 VREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQ
Sbjct: 377 GLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++II
Sbjct: 437 GRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFNLEKIRYNRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMKELVEEGHVYIAQPPLYRIYKAKKELYVYSDKELDE 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +IQR+KGLGEM P QLWETT+NPE R L Q+ IEDA A+ +F+ LMG
Sbjct: 556 ALLELGGKDTNTNIQRYKGLGEMDPEQLWETTMNPEHRTLLQVTIEDAMAADEIFTILMG 615
Query: 599 ARVDTRKELIQNAAN-LVNLD 618
+V+ R++ I+N A+ +VNLD
Sbjct: 616 TKVEPRRDFIENNADKVVNLD 636
>gi|152973859|ref|YP_001373376.1| DNA gyrase subunit B [Bacillus cytotoxicus NVH 391-98]
gi|152022611|gb|ABS20381.1| DNA gyrase, B subunit [Bacillus cytotoxicus NVH 391-98]
Length = 640
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V + D+S+ V DNGRGIP+ +
Sbjct: 31 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVVIEEDDSIRVTDNGRGIPVGIQEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 91 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + DR GT RF PD ++F +D + +A R+RELAFLN
Sbjct: 149 KYERGIPVADLKV----IGETDRTGTVTRFKPDPEIFKETTVYDFDILATRMRELAFLNR 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E+ Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 205 NIKLTIEDKRENK-----QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGAKDGIQVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 260 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 319 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 379 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF RYHK
Sbjct: 439 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDISKARYHK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G +Y+ PPL+KV++GK++QY Y++ EL
Sbjct: 498 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLFKVQQGKKIQYAYNEKEL 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+++ + P+ SIQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 558 ERILAELPAQPKPSIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 618 GDKVEPRRNFIQENAKYVKNLD 639
>gi|190710559|gb|ACE95110.1| gyrase subunit B [Bacillus thuringiensis serovar nigeriensis]
Length = 627
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADEAFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|392403099|ref|YP_006439711.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
gi|390611053|gb|AFM12205.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
Length = 668
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/622 (48%), Positives = 415/622 (66%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHH+VYE++DN +DEA AG+ IEV + N +SV+DNGRGIP+D+HP
Sbjct: 59 MYIGSTDLPGLHHMVYEVVDNCIDEAMAGHCDTIEVEISKGNIISVSDNGRGIPVDIHPK 118
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E VLT LHAGGKFG Y VSGGLHGVG+SVVNALSE +EV V RDG ++H
Sbjct: 119 VGVSTVEVVLTKLHAGGKFG--DGAYKVSGGLHGVGVSVVNALSEWVEVDVHRDGKQHHI 176
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RGK L ++GT + F D Q+F T +++ ++T++ R+RELAFLN
Sbjct: 177 AFNRGKTRAPLKAK----GPSKKRGTTVTFLADSQIFDT-LEYRYDTLSSRLRELAFLNK 231
Query: 181 KLTIALRKEDSDPEKNQYNEYFF--AGGLEEYVQWLNTDKKPLHDVVGFR-KDVDGITID 237
+ I +R D + + E+ F GG+ E+V+ L K PL + + DGI ++
Sbjct: 232 NVKITIR----DTREKEVKEHVFQYKGGIVEFVKMLTEKKNPLQKKPIYAIQQKDGIQVE 287
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
LA+++C D YS+ + +AN+I T +GGTH+EG + +LTR LN KK K + L+G
Sbjct: 288 LAIEYC-DTYSEQIFTFANAIHTREGGTHLEGFRTALTRALNEYKKKLGYDKKVEEPLTG 346
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ VREGL ++S+ +PNP+FEGQTK +LGN EV+ +V V E L EY E +P ++
Sbjct: 347 DDVREGLVLVLSILIPNPQFEGQTKMKLGNGEVKGIVTSVVYEKLCEYFEENPQDAKRVI 406
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A +AA++A++LVR+KS L + LPGKLADCS+ P++ E+FIVEGDSAGGSA
Sbjct: 407 EKCMQAALARIAARKAKELVRRKSALEGAGLPGKLADCSAREPKDCELFIVEGDSAGGSA 466
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGR+R FQAILPL+GKI NVE+ + + E+ LI A+G G+ G +F + LRYHK
Sbjct: 467 KQGRNRHFQAILPLKGKITNVEKTKLDKILGDGEVAALISAIGCGI-GAEFNIDKLRYHK 525
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
I+I+TDADVDGAHI+TLLLTFF+R+ L ++G +Y+ PPLY V GK+ Y Y D E
Sbjct: 526 IVIMTDADVDGAHIQTLLLTFFFRHMPLLIEKGGLYIARPPLYLVSHGKEKFYAYSDQEK 585
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+ F + + Y IQR+KGLGEM P QLWETT++P +R+L Q+ ++DA A+ F LM
Sbjct: 586 DKIIKGFKAESKYVIQRYKGLGEMNPEQLWETTMDPARRVLMQVSVDDAVIADETFIILM 645
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G V+ R+ I+ NA + LD
Sbjct: 646 GDEVEPRRRFIEDNAKKVEELD 667
>gi|190710557|gb|ACE95109.1| gyrase subunit B [Bacillus thuringiensis serovar londrina]
gi|190710571|gb|ACE95116.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710573|gb|ACE95117.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710579|gb|ACE95120.1| gyrase subunit B [Bacillus thuringiensis serovar canadensis]
gi|190710583|gb|ACE95122.1| gyrase subunit B [Bacillus thuringiensis serovar jegathesan]
gi|190710585|gb|ACE95123.1| gyrase subunit B [Bacillus thuringiensis serovar yosoo]
gi|190710593|gb|ACE95127.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710599|gb|ACE95130.1| gyrase subunit B [Bacillus thuringiensis serovar yunnanensis]
gi|190710603|gb|ACE95132.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
gi|190710607|gb|ACE95134.1| gyrase subunit B [Bacillus thuringiensis serovar kumamotoensis]
gi|190710613|gb|ACE95137.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|443242346|ref|YP_007375571.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
gi|442799745|gb|AGC75550.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
Length = 645
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 299/625 (47%), Positives = 421/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ NI V + DNS++V D+GRGIP+D+H
Sbjct: 29 MYIGDVGIRGLHHLVYEVVDNSIDEALAGHCDNITVIINKDNSITVTDDGRGIPVDIHKK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+RDG + Q
Sbjct: 89 EGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKATVYRDGKIWEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V + D++GT + F PD+ +F I++++ T+A R+REL+FLN
Sbjct: 147 EYERGKAMYP----VRAIGDTDKRGTDVTFTPDRSIFKQTIEYNYETLANRLRELSFLNK 202
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L D E N E F + GL+E++++L+ + P+ DV+ + +GI ++
Sbjct: 203 GIKIILTDARHQDEEGNNITEVFQSEEGLKEFIRFLDDTRSPIIEDVIAMEGEKNGIPVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + +D+YS+ + Y N+I T +GGTH+ G + LT TL S + +SG
Sbjct: 263 VAMIY-NDSYSENLHSYVNNINTHEGGTHLAGFRRGLTSTLKKYADGSGLLDKLKFDVSG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V + L +YLE HP+ +I+
Sbjct: 322 DDFREGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSQMLEDYLEEHPNDAKTIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++K+V+ LPGKL+DCS T P E+F+VEGDSAGG+A
Sbjct: 382 QKVILAATARHAARKAREMVQRKTVMSGGGLPGKLSDCSETDPTLCEVFLVEGDSAGGTA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K + L
Sbjct: 442 KQGRDREFQAILPLRGKILNVEKAMQHKVFENEEIRNIYTALGVTIGTEEDSKALNLDKL 501
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + +Y +
Sbjct: 502 RYHKIVIMCDADIDGSHIATLILTFFFRYMKELVEAGYIYIATPPLYLVKKGAKKRYAWS 561
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E ++ +F A +IQR+KGLGEM QLW+TT+NPE R L+Q+ IE AEA+ VF
Sbjct: 562 DKERDEIADNFGGGA--AIQRYKGLGEMNADQLWDTTMNPEFRTLRQISIESPAEADRVF 619
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 620 SMLMGDEVPPRREFIEKNAIYANID 644
>gi|320537025|ref|ZP_08037004.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
gi|320146100|gb|EFW37737.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
Length = 638
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/623 (49%), Positives = 427/623 (68%), Gaps = 16/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTGP GLHHLVYE++DN +DEA AG+ I V L ++ V V DNGRGIP+D+HP
Sbjct: 26 MYIGSTGPNGLHHLVYEVVDNCIDEAMAGFCDRITVVLEKNDIVRVEDNGRGIPVDIHPQ 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE VLT LHAGGKF S Y VSGGLHGVG+SVVNALS +E TV++DG E++Q
Sbjct: 86 EGISALEIVLTKLHAGGKFDKGS--YKVSGGLHGVGVSVVNALSTWMEATVYKDGAEHYQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ G P+ + V + + D+ GT IR+ D +F +D + +A R+RELAFLN
Sbjct: 144 KFEIGVPLDS----VKKISTTDKHGTTIRWAADPAIFKETTTYDFDVLATRLRELAFLNS 199
Query: 181 KLTIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDL 238
+TI +R E S P++ + F GG+ +VQ+L+ K+ L + + + + I +++
Sbjct: 200 NITIVMRDERLSTPKEATFA---FEGGISHFVQYLHGTKQVLPAEPIYIEAEKNDIIMEI 256
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS-LGKKSKTVK--DKDISL 295
ALQ+ +D Y++ +L + N I T +GGTH+EG K++LTR +N L K SK +K DK+ L
Sbjct: 257 ALQY-NDGYNENLLSFVNDINTREGGTHLEGFKSALTRVMNEFLKKNSKLIKKLDKEEKL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+GE VR GLT +IS++VP P+FEGQTKT+LGN +VR +VD V E LT + E +P ++D
Sbjct: 316 TGEDVRAGLTAVISIKVPEPQFEGQTKTKLGNSDVRGIVDSFVNEKLTLFFEQNPAIIDK 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K++S A +AA+RA++ R+KS L S LPGKLADCS P+ E++IVEGDSAGG
Sbjct: 376 ILEKTVSEATARIAARRAKEATRRKSGLDSFGLPGKLADCSLKDPKLCEVYIVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK+GRD + QAILPL GK+LNVE+ + NE++Q +I +LG G+ G+DF + +RY
Sbjct: 436 SAKKGRDSKTQAILPLWGKMLNVEKTRIDKVMNNEKLQPIIASLGTGI-GKDFNIDKIRY 494
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+ DADVDG+HIRTLLLTFF+RY + +EG +Y+ +PPLYK+ K+ Y Y+D
Sbjct: 495 HKIIIMADADVDGSHIRTLLLTFFFRYMPQIIEEGYVYLAMPPLYKISYNKKEWYVYNDE 554
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E +V ++QR+KGLGEM QLWETT++P +R + ++ + DA EA+ +FS+
Sbjct: 555 ERDQVLKEIGKENNVAVQRYKGLGEMDGTQLWETTMDPARRKMMRVTLPDAIEADRIFST 614
Query: 596 LMGARVDTRKELIQNAANLVNLD 618
LMG V+ R++ I+ A NLD
Sbjct: 615 LMGEEVEPRRQFIEENAVYANLD 637
>gi|421144701|ref|ZP_15604609.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488928|gb|EJG09775.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 635
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 309/625 (49%), Positives = 420/625 (67%), Gaps = 20/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVIDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTIHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ ++ GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KVIGACDENEHGTIVRFKADAEIFETLI-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGIT 235
LTI L D +K + Y F GG+ +++ + D +KP + + D +
Sbjct: 198 GLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDTTIIEKPFY----VSSEQDNVG 251
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+D+ + + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L
Sbjct: 252 VDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKL 310
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++
Sbjct: 311 MGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKI 370
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGG
Sbjct: 371 IIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGG 430
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY
Sbjct: 431 SAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRY 489
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D
Sbjct: 490 GKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVASGKQIVYAYNDL 549
Query: 536 ELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F
Sbjct: 550 ELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFD 609
Query: 595 SLMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+E I+ A V N+D
Sbjct: 610 KLMGDKVEPRREFIEEHAEYVKNID 634
>gi|55377342|ref|YP_135192.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|448640227|ref|ZP_21677281.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
gi|55230067|gb|AAV45486.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|445762017|gb|EMA13251.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
Length = 642
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 309/615 (50%), Positives = 422/615 (68%), Gaps = 17/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V + + GT +RFWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLKPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GI 234
+ I++ D E++ E F + GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISI-----DDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPV 258
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+Q D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +
Sbjct: 259 QVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVINDYATDNNLLKDLDDT 317
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD +
Sbjct: 318 LKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAE 377
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAG
Sbjct: 378 AIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAG 437
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F E LR
Sbjct: 438 GSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIEDLR 496
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ D
Sbjct: 497 YEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTD 556
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
AE ++ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 557 AERDQIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFN 616
Query: 595 SLMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 617 ILMGDAVEPRKEFIK 631
>gi|182416761|ref|ZP_02948158.1| DNA gyrase, B subunit [Clostridium butyricum 5521]
gi|237669641|ref|ZP_04529619.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379418|gb|EDT76913.1| DNA gyrase, B subunit [Clostridium butyricum 5521]
gi|237654875|gb|EEP52437.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 637
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 436/621 (70%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY IEV + DNS++V D+GRG+P+ +HP
Sbjct: 28 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKKIEVNINKDNSITVIDDGRGMPVGIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E ++T+LHAGGKFGG S LHGVG SVVNALSE VTV R+G + Q
Sbjct: 88 MGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEECRVTVKREGAIWQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS+GK +T V + GT++ F PD ++F I FD +A R+RELAFLN
Sbjct: 146 EYSKGKVLTD----VEKIGESSESGTQVYFKPDAEIFDEVI-FDFEILAQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I L + EK + + + GG++ +V +LN +K LH+ + + + D +++++A
Sbjct: 201 GIYIKLVDLREENEKEEV--FHYEGGIKSFVSYLNRNKVALHEEPIYIEGIKDNVSVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+
Sbjct: 259 LQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTRAFNDYAKKFGHIKENDKNFTGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT ++SV++ P+FEGQTKT+LGN EVR +VD V E ++ +LE +P V I+ K
Sbjct: 318 IREGLTAVVSVKIEEPQFEGQTKTKLGNSEVRGIVDSIVGECISTFLEENPSVGKMIVDK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R KSVL S+LPGKLADCSS P+E EI+IVEGDSAGGSAKQ
Sbjct: 378 ALMAARARDAARKARELTR-KSVLERSTLPGKLADCSSKDPKECEIYIVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R+FQAILPLRGKILNVE++ + + I++++ A G G+ G DF E +RY +II
Sbjct: 437 GRNRKFQAILPLRGKILNVEKQRLDRILNADTIRSMVTAFGAGI-GNDFDIEKIRYDRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L DEG +Y+ PPLYK+ +GK+ Y Y DAEL++
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRPLIDEGHVYIAQPPLYKISKGKKEHYAYSDAELEQ 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V F + IQR+KGLGEM QLW+TT++PEQR+L ++ +EDA +A+ +F+ LMG
Sbjct: 556 VLIDFGGKDNSTDIQRYKGLGEMNASQLWDTTMDPEQRILLRVNVEDAMQADEIFTILMG 615
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ RKE I QNA N+VNLD
Sbjct: 616 EKVEPRKEFIQQNAKNVVNLD 636
>gi|190710609|gb|ACE95135.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+ T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNTHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|335433679|ref|ZP_08558497.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
gi|334898482|gb|EGM36588.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
Length = 637
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/622 (50%), Positives = 418/622 (67%), Gaps = 16/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AG+ I V + D SVSV D+GRGIPID H
Sbjct: 27 MYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDTIAVTMHDDGSVSVVDDGRGIPIDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V R+G + Q
Sbjct: 87 YDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSAKLEVEVRREGSVWKQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G P LT + ++ GT IRFWPD +F T F +T+ R+RELAFLN
Sbjct: 145 TFDHGAPADDLT-EIEALEDSSETGTSIRFWPDGDIFETT-DFQFSTLENRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L E ++Q E F + GG+ E+V++LN K PLHD V+ F + +G+ +++
Sbjct: 203 GVEITLADE-----RDQRRETFQYDGGIREFVEYLNETKDPLHDGVIYFEDESEGVQVEV 257
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ ++ ++ +AN+I T +GGTH+ G K +LTR +N + + D + +L GE
Sbjct: 258 ALQATTELQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYATDNDLLSDIEETLKGE 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+T +ISV+ P+P+FEGQTKT+LGN EVR VV+ ++ + L Y E HPDV +I+
Sbjct: 317 DIREGMTAVISVKHPDPQFEGQTKTKLGNSEVRGVVESAMHQNLGTYFEEHPDVAGAIVR 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A KA AA++A +L R+KS L S++LPGKLADC + P E+E+FI EGDSAGGSAK
Sbjct: 377 KAVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQTKEPSEAELFIAEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q R+ FQA+LP+RGKILNVE+ + +N++I+N+I ALG GV G++F + LRY KI
Sbjct: 437 QARNPEFQAVLPIRGKILNVEKHRLDRILENDQIRNIITALGTGV-GDEFDIDELRYEKI 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I TDADVDGAHIRTLLLTFFYR+ + L + G IY PPLY++ + DAE
Sbjct: 496 IFATDADVDGAHIRTLLLTFFYRHMRPLLENGHIYAARPPLYRIRYRGETYDAMTDAERD 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ IQRFKGLGEM P QLW+TT+NPE R LKQ+ I+DAA A+ +FS LMG
Sbjct: 556 EIIEEKCDGNPTQIQRFKGLGEMNPKQLWDTTMNPENRFLKQITIDDAAAADKMFSVLMG 615
Query: 599 ARVDTRKELIQN---AANLVNL 617
V+ RK+ I+ AN V++
Sbjct: 616 DAVEPRKQFIKENSPEANWVDI 637
>gi|422339824|ref|ZP_16420781.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370667|gb|EHG18047.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 635
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/621 (49%), Positives = 418/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVVDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G+ ++Q
Sbjct: 83 YRKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKAGVIHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ +D GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KIIGSCDEDEHGTIVRFKADTEIFETLI-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLA 239
LTI L D +K + Y F GG+ +++ + + D + + D + +D+
Sbjct: 198 GLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEDTTIIEKPFYISSEQDNVGVDVT 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 256 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 315 IREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKIIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 435 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 494 LMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVSSGKQIVYAYNDLELKN 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 554 VLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 613
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 614 DKVEPRREFIEEHAEYVKNID 634
>gi|448340252|ref|ZP_21529225.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
gi|445630558|gb|ELY83819.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
Length = 642
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/615 (49%), Positives = 424/615 (68%), Gaps = 10/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRH 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ D GT IRFWPD +F T + +T++ R+RELAFLN
Sbjct: 144 AFEAGEPVGDME-RVRDMEPDDETGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNS 201
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR +E++D Y + GG+ E+V +LN + +HD V+ F + I ++
Sbjct: 202 GVRITLRDEREETDAGDPVTETYEYDGGIREFVNYLNETRSAMHDDVIYFEDEAQNIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 262 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDDNLKG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+
Sbjct: 321 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 381 AKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 441 KQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 500 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 560 DAIVAEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLM 619
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 620 GDAVEPRKQFIKDHA 634
>gi|399574434|ref|ZP_10768193.1| DNA gyrase, B subunit [Halogranum salarium B-1]
gi|399240266|gb|EJN61191.1| DNA gyrase, B subunit [Halogranum salarium B-1]
Length = 618
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/616 (51%), Positives = 424/616 (68%), Gaps = 10/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY NI+V + D+SVSV D+GRGIP+D H
Sbjct: 1 MYIGSTDARGLHHLVYEVVDNSIDEALAGYCDNIDVTIHEDDSVSVEDDGRGIPVDTHEQ 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS +LEV V RDG +
Sbjct: 61 YGRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTTLEVEVKRDGSVWTH 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG+P V + + GT+IRFWPD +F +++++T+A R+RELAFLN
Sbjct: 119 RFERGEPQVDAFEEVREMRPDEETGTKIRFWPDDDIFEET-EYNYSTLANRLRELAFLNS 177
Query: 181 KLTIALRKE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I L E D+D +E F + GG++E+V++LN K PLH DVV F + D I ++
Sbjct: 178 GVEITLTDERDTDDAGEPVSEIFRYDGGIKEFVEYLNETKTPLHADVVYFEDEQDNIQVE 237
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + + D D +L G
Sbjct: 238 VAMQ-ATDELQGSIHSFANNINTREGGTHLTGFKTALTRVVNDYASSNDMLTDLDNNLKG 296
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V L Y E +P S++
Sbjct: 297 EDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHNGLKTYFEENPATAQSVI 356
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KA AAK+A +L R+KS L SSSLPGKLADC + PEE+E+FIVEGDSAGGSA
Sbjct: 357 MKAVEAAKARQAAKKAEELTRRKSALESSSLPGKLADCQTRKPEEAELFIVEGDSAGGSA 416
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR+ QAILPL+GKILNVE+ + +N E++ LI A+G G+ GE+F E RY K
Sbjct: 417 KQGRDRKNQAILPLKGKILNVEKNRLDRVLENNEVRALITAIGAGI-GEEFDIEKTRYQK 475
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAE 536
II++TDADVDGAHIRTLLLT YR+ K L + G +Y PPLY+V RG+ +
Sbjct: 476 IIMMTDADVDGAHIRTLLLTLLYRHMKPLIEAGYVYAAQPPLYRVRYRGETYDAMTEAER 535
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ ++ N +QRFKGLGEM P QLWETT++PE R+LKQ+ IEDAA A+ +F+ L
Sbjct: 536 ERIIEEKCNGNPT-QVQRFKGLGEMNPEQLWETTMDPENRILKQITIEDAAAADRMFNVL 594
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I++ A
Sbjct: 595 MGDAVEPRKQFIKDHA 610
>gi|406885538|gb|EKD32706.1| hypothetical protein ACD_76C00161G0005 [uncultured bacterium]
Length = 684
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/656 (49%), Positives = 423/656 (64%), Gaps = 46/656 (7%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLV+E++DN++DEA AG+A++I V LL D+ V V+DNGRGIP+D+HP
Sbjct: 41 MYIGSTGASGLHHLVWEVVDNSIDEAMAGFATDITVKLLPDSMVEVSDNGRGIPVDIHPQ 100
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLT LHAGGKFG GY VSGGLHGVG+SVVNALS L V RDG + Q
Sbjct: 101 YKKSALELVLTKLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSSYLRAEVKRDGKLWMQ 158
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS GKP V P+ S GT I F PD +F A +F+ TI +R+ A+L
Sbjct: 159 EYSEGKP----KSKVKPIKSASGTGTIITFQPDFTIFD-AKEFNLQTIFDHLRQQAYLTR 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF---RKDVDGITID 237
+ I + E K+ Y ++F GG+ YV+ +N KKP H+ V + D + ++
Sbjct: 214 GVKITVTDERDKKNKSVY-AFYFEGGVASYVRHINHGKKPKHENVFYVQKHSDEADMDVE 272
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y +++ +AN+I +GGTH+ G + + TR LN+ ++ +K+KD +L+G
Sbjct: 273 VALQY-TEEYHESIFCFANNIFNPEGGTHLVGFRTASTRALNNYARQKGYLKEKDENLTG 331
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT +ISV++ P+FEGQTK +LGNPE R V+ E YLE HP ++I+
Sbjct: 332 EDVREGLTTVISVKIKEPQFEGQTKAKLGNPEARTAVESIFGEAFETYLEEHPRDAEAII 391
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
SK + + +A AA+ ARD V +K L +LPGKLADCSS P SE+FIVEGDSAGGSA
Sbjct: 392 SKCVLSAQARAAARAARDTVLRKGALEGLTLPGKLADCSSRDPNNSELFIVEGDSAGGSA 451
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR QAILPLRGKILNVER M N EI++LI ALG + GE F + LRY K
Sbjct: 452 KQGRDRETQAILPLRGKILNVERSRIDKMLSNTEIKSLIIALGTNI-GEMFSLDGLRYSK 510
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE- 536
I+I+TDADVDGAHIRTLLLT FYR+ + L +G IY+ PPLY+++ GK+ QY Y D E
Sbjct: 511 IVIMTDADVDGAHIRTLLLTLFYRHFQELIKQGHIYIAQPPLYRIQIGKEAQYVYSDEEK 570
Query: 537 ---LKKVKSSFPSNALYS---------------------------IQRFKGLGEMMPVQL 566
+ K K F S A + IQR+KGLGEM P QL
Sbjct: 571 QRVMDKFKKEFGSEAEITETAQQEEGEDSEEQAPVASSSKTPKIIIQRYKGLGEMNPDQL 630
Query: 567 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
WETT+NP R++KQ+ I+DA +A+ +F LMG+ V+ RK+ IQ A V +HLDI
Sbjct: 631 WETTMNPANRVIKQVTIDDAQKADEIFDILMGSDVEPRKKFIQTHAKTV--EHLDI 684
>gi|281491407|ref|YP_003353387.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis KF147]
gi|281375141|gb|ADA64657.1| DNA gyrase, subunit B [Lactococcus lactis subsp. lactis KF147]
Length = 651
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/625 (48%), Positives = 434/625 (69%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+VTV +DG +Y+Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTVLDVTVHKDGQKYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L + DR+GT + F PD ++FT ++FD + +A R+RELAFLN
Sbjct: 153 EYHRGLVGDDLKI----IGETDRRGTTVHFVPDPEIFTETVEFDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I+L + EKN+ + + + GG++ YV++LN +K + + F + ++DGI +++A
Sbjct: 209 GLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNENKTVIFEPAIFTEGEMDGIAVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH +G + +LTR +N+ K++K +K+ + +L+G+
Sbjct: 268 MQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALTRVINNYAKQNKILKENEDNLTGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++ E LT ++ +P V I+ K
Sbjct: 327 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFAEALTTFMLENPQVARKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS PE++E+FIVEGDSAGGSAK
Sbjct: 387 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNNPEQTELFIVEGDSAGGSAKS 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G D+ RYHK++
Sbjct: 447 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGF-GADYDLSKARYHKLV 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PP+Y ++ G + + E
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSETKEYIQPGENQE 565
Query: 537 --LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
L++ + + ++QR+KGLGEM QLWETT++PE R++ ++ +EDAAEA+ +F
Sbjct: 566 KDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWETTMDPEHRLMARVSVEDAAEADKIF 625
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+N A +D
Sbjct: 626 DMLMGDRVEPRREFIENNAQYSTID 650
>gi|150003955|ref|YP_001298699.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|294775119|ref|ZP_06740648.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|319639808|ref|ZP_07994538.1| B subunit [Bacteroides sp. 3_1_40A]
gi|345518957|ref|ZP_08798390.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|423312902|ref|ZP_17290838.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
gi|149932379|gb|ABR39077.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|254833591|gb|EET13900.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|294451163|gb|EFG19634.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|317388625|gb|EFV69474.1| B subunit [Bacteroides sp. 3_1_40A]
gi|392686933|gb|EIY80232.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
Length = 654
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/631 (48%), Positives = 415/631 (65%), Gaps = 23/631 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRGGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLN 179
+YS G P+ + V V + D GT+ FWPD +FT T +FD + R+RELA+LN
Sbjct: 151 EYSCGHPLYS----VKEVGTADITGTKQTFWPDDTIFTVTEYKFD--ILQARMRELAYLN 204
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
+TI+L E + + F G++E+V++LN + + L +DV+ + + I
Sbjct: 205 KGITISLTDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNRNNEALINDVIYLNTEKNNTPI 264
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ A+ + + Y +++ Y N+I TI+GGTH G +++LTR L + +K ++ + +S
Sbjct: 265 ECAIMY-NTGYRESLHSYVNNINTIEGGTHEAGFRSALTRVLKKYAEDTKALEKAKVEIS 323
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I
Sbjct: 324 GEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTYYLEEHPKEAKQI 383
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A +AA++AR+ V++KS + LPGKLADCSS PEE E+F+VEGDSAGGS
Sbjct: 384 VDKVILAATARIAARKARESVQRKSPMGGGGLPGKLADCSSRNPEECELFLVEGDSAGGS 443
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG--LGVKGEDFKKEA-- 472
AKQGR R FQAILPLRGKILNVE+ ++++E+ N+I ALG GV G D K+A
Sbjct: 444 AKQGRSRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIITALGVRFGVDGNDDSKKANI 503
Query: 473 --LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
LRYHK++I+TDADVDG+HI TL++T FYRY + + G +Y+ PPLYK +GK +Y
Sbjct: 504 DKLRYHKVVIMTDADVDGSHIDTLIMTLFYRYMPEIIENGHLYIANPPLYKCSKGKISEY 563
Query: 531 CYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 587
CY + + + N +++ QR+KGLGEM P QLWETT+NPE R+LKQ+ I++AA
Sbjct: 564 CYTEEARQAFIQKYGDGQENGIHT-QRYKGLGEMNPEQLWETTMNPETRILKQVTIDNAA 622
Query: 588 EANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 623 NVDYIFSMLMGDDVAPRREFIEKNATYANID 653
>gi|145578013|gb|ABP82725.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar graciosensis]
Length = 632
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+ I+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWGIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGETDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|448627574|ref|ZP_21672040.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
gi|445758882|gb|EMA10178.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
Length = 642
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/614 (49%), Positives = 420/614 (68%), Gaps = 15/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GIT 235
+ I++ D + + + GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISI----IDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQ 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+Q D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L
Sbjct: 260 VEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVINDYATDNNLLKDLDDTL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++
Sbjct: 319 KGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGG
Sbjct: 379 IVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F E LRY
Sbjct: 439 SAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIEDLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DA
Sbjct: 498 EKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDA 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E ++ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 558 ERDRIIEEKCDGNPTQVQRFKGLGEMNPDQLWETTMNPDNRILKQITIEDAAAADKMFNI 617
Query: 596 LMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 618 LMGDAVEPRKEFIK 631
>gi|282163382|ref|YP_003355767.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
gi|282155696|dbj|BAI60784.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
Length = 635
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/620 (49%), Positives = 428/620 (69%), Gaps = 17/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY NIEV + D SV+V+D+GRGIP+++H
Sbjct: 30 MYIGSTDYRGLHHLVYEVVDNSIDEALAGYCHNIEVTINKDGSVTVSDDGRGIPVEMHEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ ALE V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE L V V R+ + Q
Sbjct: 90 YKRPALEIVMTMLHAGGKFDNLT--YKVSGGLHGVGVSVVNALSEWLRVEVRRNEKLWVQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP V + + GT F PD +F T +F + + R+RELAFLN
Sbjct: 148 EYVRGKP----KDEVHEIGTAIGTGTTTIFKPDPTIFETT-EFKYEILVNRLRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L D + + + GG+ ++VQ+LN K P+++ V+ F K D +++A
Sbjct: 203 GVKITL----MDARSGVSDTFHYEGGIVQFVQYLNEGKTPVNEKVIYFEKQKDTTDVEIA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YS+ +L +AN+I T +GGTH+ G +++LTR+ N KK+ +K D+ SGE
Sbjct: 259 MQY-NDGYSEIVLAFANNIHTTEGGTHLSGFRSALTRSFNDYAKKNSLLKG-DMQFSGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT IISV++ NP+FEGQTKT+LGN +V+ +V+ V E L ++LE +P I+ K
Sbjct: 317 IREGLTAIISVKLTNPQFEGQTKTKLGNSDVQGIVNSLVGEGLDDFLEENPSEARKIIDK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+KSVL +++LPGKLADCS P + E+++VEGDSAGGSAKQ
Sbjct: 377 AVQAFQAREAARKARELTRRKSVLENTTLPGKLADCSERDPSKCELYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPLRGKILNVE+ + +EEI+ LI A+G V GEDF + RYHKII
Sbjct: 437 GRNRLFQAILPLRGKILNVEKARLDRVLTSEEIRALITAMGTSV-GEDFVIDKARYHKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFF+RY K L + G +Y+ PPL++ ++GK+ +Y Y++ L
Sbjct: 496 LMTDADVDGAHIRTLLLTFFFRYMKPLIEAGYVYIAQPPLFRAKKGKEERYAYNEEALAG 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ N + ++ R+KGLGEM P QLW TT++P+ R + Q+ +EDA EA+ F+ LMG
Sbjct: 556 ILEEMGRNGV-AVNRYKGLGEMNPEQLWSTTMDPQTRTVLQVTMEDAVEADRTFTLLMGD 614
Query: 600 RVDTRKELI-QNAANLVNLD 618
+V+ R++ I QNA + NLD
Sbjct: 615 KVEPRRDFIVQNAKFVRNLD 634
>gi|329964535|ref|ZP_08301589.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
gi|328524935|gb|EGF51987.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
Length = 657
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/638 (47%), Positives = 423/638 (66%), Gaps = 34/638 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISENGLHHLVYEVVDNSIDEAMAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
+Y GKP+ + TC GT+ FWPD +FT + ++ + T+ R+RELA
Sbjct: 151 EYECGKPLYAVKEVGTC------DPGFSGTKQTFWPDDSIFTVS-EYKYTTLQARLRELA 203
Query: 177 FLNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKD 230
+LN +TI L + E+ +P Q ++ G++E+V++LN++ PL D V+ +
Sbjct: 204 YLNKGITITLTDLRSKDEEGNP---QVEKFHSEEGVKEFVRYLNSNNNPLFDDVIYLNTE 260
Query: 231 VDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTV 288
G+ I+ A+ + + Y + + Y N+I T +GGTH G +A+LTR L G+ + K +
Sbjct: 261 KAGVPIECAIMY-NTGYRENLHSYVNNINTKEGGTHEGGFRAALTRVLKKYGEDTCAKQL 319
Query: 289 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 348
+ + +SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E L+ YLE
Sbjct: 320 EKAKVEISGEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALSYYLEE 379
Query: 349 HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 408
HP I+ K + A A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+V
Sbjct: 380 HPKEAKLIVEKVILAATARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLV 439
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE 466
EGDSAGGSAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV E
Sbjct: 440 EGDSAGGSAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDSE 499
Query: 467 DFKK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE 523
D K+ + LRY K+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY
Sbjct: 500 DSKEANIDKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQNGYLYIATPPLYLCS 559
Query: 524 RGKQVQYCYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 580
+GK +YC+ D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ
Sbjct: 560 KGKVKEYCWTDQQRQKFIDTYGGGSENAIHT-QRYKGLGEMNPEQLWETTMNPENRMLKQ 618
Query: 581 LVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +E AAEA+ VFS LMG V R++ I+ A N+D
Sbjct: 619 VHLESAAEADYVFSMLMGEDVGPRRDFIEANATYANID 656
>gi|336171503|ref|YP_004578641.1| DNA gyrase subunit B [Lacinutrix sp. 5H-3-7-4]
gi|334726075|gb|AEH00213.1| DNA gyrase, B subunit [Lacinutrix sp. 5H-3-7-4]
Length = 649
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/625 (46%), Positives = 422/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ NI V + DNS++ D+GRGIP+DLH
Sbjct: 33 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDNITVTINEDNSITTEDDGRGIPVDLHKK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALSE L TV+R+G + Q
Sbjct: 93 EGISALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLTATVYRNGKIWEQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V + D++GT + F PD +FT ++++++T+A R+RELA+LN
Sbjct: 151 EYERGKSLYP----VKAIGDTDKRGTIVTFKPDPTIFTQTLEYNYDTLASRMRELAYLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L + S E Y F GL+E++++L+ ++PL DV+ F + +G+ ++
Sbjct: 207 GITVHLIDKRSKKEDGSYEGETFHSEEGLKEFIKFLDATREPLMKDVISFEGEKNGVPVE 266
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL +S + ++G
Sbjct: 267 VAMVYNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKYADESGMLDKLKFDIAG 325
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT I+SV+V P+FEGQTKT+LGN EV V QSV E L++YLE +P+ +I+
Sbjct: 326 DDFREGLTAIVSVKVQEPQFEGQTKTKLGNREVSAAVSQSVSEMLSDYLEENPEDAKTIV 385
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+V+ LPGKL+DCS P + E+++VEGDSAGG+A
Sbjct: 386 QKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQDPAKCEVYLVEGDSAGGTA 445
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K L
Sbjct: 446 KQGRDRAFQAILPLRGKILNVEKAMTHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKL 505
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY +++G + QY ++
Sbjct: 506 RYHKIVIMCDADIDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLIKKGAKKQYAWN 565
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E K + F ++ IQR+KGLGEM QLW+TT+NPE R L+Q+ I++ EA+ VF
Sbjct: 566 DEERKAIMQEFGESS--KIQRYKGLGEMNAEQLWDTTMNPEFRTLRQIHIDNGVEADRVF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 624 SMLMGDEVPPRREFIEKNAIYANID 648
>gi|291461019|ref|ZP_06026484.2| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693]
gi|291379423|gb|EFE86941.1| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693]
Length = 639
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/621 (49%), Positives = 421/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L DN + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKILPDNIIEVVDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G Y+Q
Sbjct: 87 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKEGNVYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ + GT +RF D+ +F T I +++ T++ R++ELA+LN
Sbjct: 145 KYYRGKPEEDV--KIIGSCEESEHGTTVRFKADRDIFETLI-YNYFTLSNRLKELAYLNR 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D E+ + Y F GG+ +++ + ++ + D + + D + +D+
Sbjct: 202 GLTITL--SDLRKEEKKEETYKFDGGILDFLNEIVKEEATIVDKPFYVSSEQDNVGVDVT 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 260 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN E+ +V+ V L +LE +P + ++ K
Sbjct: 319 IREGVVAIVSTKIPQPQFEGQTKGKLGNSEISGIVNTIVSNSLKIFLEDNPAITKIVIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 379 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 439 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 498 LMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKN 557
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 558 VLGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 617
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 618 DKVEPRREFIEEHAEYVKNID 638
>gi|258513372|ref|YP_003189594.1| DNA gyrase subunit B [Desulfotomaculum acetoxidans DSM 771]
gi|257777077|gb|ACV60971.1| DNA gyrase, B subunit [Desulfotomaculum acetoxidans DSM 771]
Length = 635
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 438/620 (70%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D+H
Sbjct: 29 MYIGSTGAKGLHHLVYEVVDNSIDEAMAGYCDHIEVFINEDNSITVTDNGRGIPVDIHSK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SA+E V+T LHAGGK GY VSGGLHGVG+SVVNALS+ LEV V R G + Q
Sbjct: 89 TGNSAVELVMTTLHAGGK--FGGGGYKVSGGLHGVGVSVVNALSKWLEVEVRRQGKIFFQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PV+ L V GT+I F PD+++F I F T+ R++ELA+LN
Sbjct: 147 RYERGIPVSDLKI----VGDSSFTGTKITFSPDEEIFEDVI-FSRETLEQRLQELAYLNS 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
++ I L+ D N Y + GG++++V +N DK L + + F ++ D + +++A
Sbjct: 202 RVKIYLK----DFINNLEFSYMYEGGIKDFVAHINQDKILLPEAPLYFVREKDHVMVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +DAY + + Y N+I TIDGGTH G +++LTR +N KK+ +K+ + +LSGE
Sbjct: 258 MQY-TDAYFENLFSYVNNIHTIDGGTHEAGFRSALTRVINDYAKKNNLIKNNEGNLSGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +IS++VP P+FEGQTK +LGN EVR +VD V E L+ +LE +P V I+ K
Sbjct: 317 IREGLTAVISIKVPEPQFEGQTKGKLGNSEVRGIVDSVVAEGLSTFLEENPAVSKKIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+SA +A AA++AR+L R+K+VL SS+LPGKL+DCS+ P ESE+++VEGDSAGGSAKQ
Sbjct: 377 SISAFRAREAARKARELTRRKNVLESSTLPGKLSDCSNRDPSESELYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPL+GKILNVE+ + N+EI+ +I ALG G+ GEDF RYHK+I
Sbjct: 437 GRDRKFQAILPLKGKILNVEKARLDKILNNDEIRAMITALGTGI-GEDFDITKARYHKLI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L + G I++ PPLY++++GK Y Y D +L+
Sbjct: 496 IMTDADVDGSHIRTLLLTFFYRYMRPLIEAGYIFIAQPPLYRLKKGKMEIYLYSDRDLEN 555
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
N + SIQR+KGLGEM QLW+TT++PE R + + +E+AAEA+ +F +LMG
Sbjct: 556 KLKEVGRNGI-SIQRYKGLGEMDAQQLWDTTMDPENRTILMVELENAAEADKIFDTLMGD 614
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R+ I ++A ++ NLD
Sbjct: 615 RVEPRRSFINKHAHDVRNLD 634
>gi|145577993|gb|ABP82715.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar alesti]
Length = 632
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 424/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSILVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRD FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDCHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLL TFFYRY + + G IY+ PPL+KV++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLFTFFYRYMGQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAANLV-NLD 618
G +V+ R+ IQ A V NLD
Sbjct: 611 GDKVEPRRNFIQENAKFVKNLD 632
>gi|190710561|gb|ACE95111.1| gyrase subunit B [Bacillus thuringiensis serovar novosibirsk]
Length = 627
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 142 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLL FFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLMFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|297543507|ref|YP_003675809.1| DNA gyrase subunit B [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841282|gb|ADH59798.1| DNA gyrase, B subunit [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 633
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 308/621 (49%), Positives = 433/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 27 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q
Sbjct: 87 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVVVKQRGKIFRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + GT I F PDK++F + F+++ +A R+RELAFLN
Sbjct: 145 TYERGVPKTDLEIIG----ETEETGTTITFKPDKEIFEETV-FNYDVLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++
Sbjct: 200 GINIKLIDE-RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D Y++ + +AN+I T +GGTH+ G K++LT+ +N +K +KD + +L GE
Sbjct: 255 CMQY-NDTYTENIFSFANNIDTREGGTHLVGFKSALTKVINDYARKYGIIKDNEKNLQGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+
Sbjct: 314 DVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVENVVIEKLSAFLEENPSVAKVIVE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ A +A AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK
Sbjct: 374 KATQAARAREAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK+
Sbjct: 434 TGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKV 492
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL
Sbjct: 493 VIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDKELD 552
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 553 RILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKRTILKVTLEDAIAADEIFTILMG 611
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 612 DKVEPRREFIERYAKTVRNLD 632
>gi|194335198|ref|YP_002016992.1| DNA gyrase subunit B [Pelodictyon phaeoclathratiforme BU-1]
gi|194307675|gb|ACF42375.1| DNA gyrase, B subunit [Pelodictyon phaeoclathratiforme BU-1]
Length = 649
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/625 (49%), Positives = 416/625 (66%), Gaps = 28/625 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYEI+DN++DE G+ I V+L D SV+V D+GRGIP+D+HP
Sbjct: 38 MYIGDIYSRGLHHLVYEIVDNSIDETLGGFNDYIFVSLNPDGSVTVIDHGRGIPVDIHPE 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V RDG Y Q
Sbjct: 98 KQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVSRDGKLYFQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P V + S D +GT+ F PD +F T + + I R+RELAFLN
Sbjct: 156 RFERGVP----QGDVKVIGSSDHRGTKTTFLPDHLIFKTT-ELRKDIIIDRMRELAFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGI 234
+L+I ++ + + E F + GG++E+VQ+ LN K+P++ + G R D
Sbjct: 211 ELSITVQDTEG------FQEIFHYEGGIKEFVQFTDQNRLNLLKEPIY-LYGER---DST 260
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++ALQ+ +D Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +S
Sbjct: 261 IVEIALQY-NDTYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLS 319
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ + E L+E+ E +P+VL
Sbjct: 320 LTGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVETVINEQLSEFAESNPNVLK 379
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ K A + AA+RA++L R+KSVL SS LPGKLADCS PE E++IVEGDSAG
Sbjct: 380 MIIEKVKGAAMSREAARRAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAG 439
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LR
Sbjct: 440 GSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSVEKLR 499
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y KIII+TDADVDGAHIRTLLLTFF+RY + L + G +++ PPLY V+ GK QY +DD
Sbjct: 500 YGKIIIMTDADVDGAHIRTLLLTFFFRYMRALIEAGRVFIAQPPLYLVKSGKDQQYAWDD 559
Query: 535 AELKKV----KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
E + K A IQR+KGLGEM P QLW TT++P R L + +E+A EA+
Sbjct: 560 EERNSISDGMKKMQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLLVNVENAMEAD 619
Query: 591 VVFSSLMGARVDTRKELIQNAANLV 615
VFS+LMG +V+ R+E I+ A V
Sbjct: 620 QVFSTLMGDKVEPRREFIEKNARYV 644
>gi|145577971|gb|ABP82704.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RD ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDRKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T A R+RELAFLN
Sbjct: 142 KYERGIPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTSATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|319936688|ref|ZP_08011101.1| DNA gyrase subunit B [Coprobacillus sp. 29_1]
gi|319808245|gb|EFW04810.1| DNA gyrase subunit B [Coprobacillus sp. 29_1]
Length = 640
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 310/620 (50%), Positives = 421/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN++DEA AG+ + I+V L + V V DNGRG+P H
Sbjct: 30 MYIGTTSARGLHHLVWEIVDNSIDEALAGFCNEIKVILEKGDIVKVIDNGRGMPTGKHAK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ET+LTVLHAGGKFGG S LHGVG SVVNALSE LEV V R+G Y+Q
Sbjct: 90 TGKSTVETILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVHVHREGHIYYQ 147
Query: 121 KYSRGK-PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++ +G PV L + D GT + F D +F +D++T+ RIRELAFLN
Sbjct: 148 RFEKGGVPVGDLKI----IGDCDDTGTIVSFKADPLIFNETTIYDYDTLNQRIRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-VDGITIDL 238
L + L ++P K NEY + GG++EYV +LN +K +H+ + + +D +D I +++
Sbjct: 204 KGLKLILEDHRNEPYKK--NEYHYEGGIKEYVAYLNRNKTAIHEEIIYVEDEIDDIKVEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D Y + + N+I T +GGTH EG + +LTR +N+ K + +K D SL+G+
Sbjct: 262 GMQY-NDGYQPNIYSFCNNINTHEGGTHEEGFRLALTRVINNYAKNNNFLKKDDESLNGD 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT IISV+ P+P++EGQTKT+LGN EVRK+ + E L ++L +PD I++
Sbjct: 321 DCREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIASNIISEALDKFLLENPDTASIIMN 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A A +AAKRAR++ R+K+ L S +LPGKLADCSS P E E+FIVEGDSAGGSAK
Sbjct: 381 KAIVASHARMAAKRAREMTRRKTALDSIALPGKLADCSSKDPSECEVFIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRDRR QAILPLRGKILNVE+ + N EI+++I A G G+ G++F LRYHKI
Sbjct: 441 MGRDRRTQAILPLRGKILNVEKARLDRILGNAEIRSMITAFGTGI-GDEFDISKLRYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG HIR L+LTF YR+ K L +EG +Y PPLY ++ GK+ Y Y D EL+
Sbjct: 500 VIMTDADVDGGHIRILMLTFLYRFLKPLIEEGFVYAAQPPLYLLKHGKEEHYLYSDYELE 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+K NA Y+IQR+KGLGEM QLWETT++PE R+L Q+ ++DA +A+ +F +LMG
Sbjct: 560 KLKEDLGPNAKYNIQRYKGLGEMNAEQLWETTMDPENRLLWQIDLDDAMQADAMFDTLMG 619
Query: 599 ARVDTRKELIQNAANLVNLD 618
+V+ R+E IQ A LD
Sbjct: 620 EKVEPRREFIQEHAQEAELD 639
>gi|160946608|ref|ZP_02093811.1| hypothetical protein PEPMIC_00566 [Parvimonas micra ATCC 33270]
gi|158446992|gb|EDP23987.1| DNA gyrase, B subunit [Parvimonas micra ATCC 33270]
Length = 638
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/624 (49%), Positives = 431/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AG I V + DNSV V DNG GIP+++HP
Sbjct: 29 MYIGSTGVKGLHHLVYEVVDNSIDEALAGVCDTITVTIFEDNSVRVEDNGSGIPVEVHPQ 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLT+LHAGGKF +++ Y VSGGLHGVG+SVVNALSE L V RDG Y Q
Sbjct: 89 TGKSTLETVLTILHAGGKF--NNNAYQVSGGLHGVGVSVVNALSEWLIANVKRDGKLYEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++SRG + L V + GT I F PD ++F T I ++ + R RE+AFLN
Sbjct: 147 QFSRGNTTSKLEV----VGTSKETGTIITFKPDSEIFDTTI-YEKEILRNRFREMAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I E D + E F + GG++ +V+++N +K LH+ V+ F+ +++
Sbjct: 202 GVKIIFTDERED-----FTETFHYEGGIKSFVEYMNRNKNNLHNEVIYFQGQRGDSQVEI 256
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
++Q+ +D YS+ +L +AN+I T +GG+H+ G + +LTRTLN G+K +KDKD +L G+
Sbjct: 257 SMQY-TDGYSENVLTFANNIHTPEGGSHLVGFRTALTRTLNDYGRKYNLIKDKDANLQGD 315
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT I+S+++PNP+FEGQTK +LGN E R +V+ + + L +LE +P V I+
Sbjct: 316 DTREGLTGIVSIKLPNPQFEGQTKAKLGNSESRGIVETFLYDNLMTFLEENPKVGKIIIE 375
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ S+ +A AA++ARDL R+KS+L +++LPGKL+DC + +EI++VEGDSAGGSAK
Sbjct: 376 KAQSSARAREAARKARDLTRKKSILDNTTLPGKLSDCQESDISVNEIYLVEGDSAGGSAK 435
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRD +FQA+LPL+GKI+NVE+ + EEI+++I A G G+ G+DF + LRY KI
Sbjct: 436 QGRDSKFQAVLPLKGKIMNVEKARIDKILGYEEIKSMITAFGTGI-GKDFNLDNLRYGKI 494
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAEL 537
+I+TDADVDGAHIRTL+LTFFYRY K L ++G +Y+ PPLY + +G K V+YC+ D EL
Sbjct: 495 VIMTDADVDGAHIRTLILTFFYRYMKELIEQGHVYIAQPPLYGIIKGVKVVKYCWTDEEL 554
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV--VFSS 595
+ ++ + IQR+KGLGEM P QLWETT+NPE R+ Q+ I+D ++ FS+
Sbjct: 555 QASLDELGRDS-HRIQRYKGLGEMNPAQLWETTMNPENRLFLQVNIDDEELVSIDETFST 613
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+E I QNA + N+D
Sbjct: 614 LMGDKVEPRREFIEQNAKYVENID 637
>gi|448410257|ref|ZP_21575122.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
gi|445671953|gb|ELZ24532.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
Length = 638
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 307/614 (50%), Positives = 429/614 (69%), Gaps = 13/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDDRGLHHLVYEVVDNSIDEALAGYCDSISVTIHDDGSVSVSDDGRGIPVDTHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+K A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALSE L+V V RDG Y +
Sbjct: 88 YDKPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLDVEVKRDGAVYRE 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G P L V +D+ + GT IRFWPD ++F A ++D++T+ R+RELAFLN
Sbjct: 146 SFEQGAPQDGLE-RVRDMDADEGTGTTIRFWPDTEIFE-ADEYDYSTLESRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I L +D + + + GG+ E+V++LN K+PLH +VV F + I +++A
Sbjct: 204 GVEITL----TDERDGTADTFRYEGGIREFVEYLNETKEPLHQEVVYFEDEDQDIHVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ ++ ++ +AN+I T +GGTH+ G K +LTR +N +++ + + D +L G+
Sbjct: 260 LQ-ATNELQGSIHAFANNINTREGGTHLTGFKTALTRIVNDYAEENSLLGEIDGTLKGDD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V + L Y E HPD + I+ K
Sbjct: 319 IREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHDGLGTYFEEHPDTAEVIVQK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AAK+A++L R+KS L S++LPGKL+DC + PE++E+FI EGDSAGGSAKQ
Sbjct: 379 AVEAAKARKAAKKAKELTRRKSALDSTALPGKLSDCQTRDPEDAELFITEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+ FQAILP+RGKILNVE+ + +N EI+ +I A+G G+ G++F E RY KI+
Sbjct: 439 GRNPEFQAILPIRGKILNVEKHRLDRILENNEIRAMITAIGTGI-GDEFDIEEARYEKIV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELK 538
++TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY+V RG+ D+ +
Sbjct: 498 LMTDADVDGAHIRTLLLTFFYRHMRPLLEAGYVYAAQPPLYRVRYRGETYDAMSDEERDR 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V+ N +QRFKGLGEM P QLW+TT++P+QR+LKQ+ IEDAA A+ +FS LMG
Sbjct: 558 IVEEKCDGNPT-QVQRFKGLGEMNPQQLWDTTMDPQQRILKQITIEDAAAADKMFSVLMG 616
Query: 599 ARVDTRKELIQNAA 612
V+ RK+ I++ A
Sbjct: 617 DAVEPRKQFIKDHA 630
>gi|255659815|ref|ZP_05405224.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
gi|260847890|gb|EEX67897.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
Length = 688
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/620 (51%), Positives = 432/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I+V + DNS++V DNGRGIP+D+H
Sbjct: 81 MYIGSTSERGLHHLVYEVVDNSIDEALAGYCDHIDVTIHKDNSITVVDNGRGIPVDMH-E 139
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ K A+E VLTVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG Y
Sbjct: 140 SGKPAVEVVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTSMEVQVKRDGKIYEI 197
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG LT + GTR+ F PD ++F+ + + T+ R+REL+FLN
Sbjct: 198 AFERGVTTKPLTVVG----TTTETGTRVHFMPDPEIFSVTT-YSYETLRHRLRELSFLNH 252
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+TI L E +P +++ ++ F GG+ +V+ LN K+ L+ + + F D +++A
Sbjct: 253 GITIGLHDERVEPVRSE--QFHFDGGISSFVEHLNRKKEVLNPEPIYFNGVKDDTVVEIA 310
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSG+
Sbjct: 311 MQY-NDSYQENIYSFVNNINTEEGGTHLAGFKLALTRAANDFARKQGILKDKDSNLSGDD 369
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLTC+IS+++ P+FEGQTKT+LGN EVR +VD V E L+EY + +P + I+ K
Sbjct: 370 VREGLTCVISLKIREPQFEGQTKTKLGNSEVRGIVDSIVTEGLSEYFDENPAITKRIIDK 429
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQ
Sbjct: 430 AIMAARAREAARKARELTRRKNALEVSSLPGKLADCSVKDPEQAEIYLVEGDSAGGSAKQ 489
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ ++ N EI+ +I A G G+ EDF RY KII
Sbjct: 490 GRDRRFQAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-EDFDLSKRRYGKII 548
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF YRY K L + G +Y+ PPLY++ +GK+ Y Y D EL K
Sbjct: 549 IMTDADVDGAHIRTLLLTFLYRYMKPLIEHGHVYIAQPPLYQIRKGKKHWYTYSDDELSK 608
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + ++QR+KGLGEM P QLWETT++PE R + ++ +EDA EA+ +F+ LMG
Sbjct: 609 KLDEVGRDGV-TVQRYKGLGEMNPEQLWETTMDPEGRTMLRVEMEDAEEADELFTILMGD 667
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I+ A LV NLD
Sbjct: 668 KVEPRRQFIEENAKLVRNLD 687
>gi|336397547|ref|ZP_08578347.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
gi|336067283|gb|EGN55917.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
Length = 657
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/635 (47%), Positives = 428/635 (67%), Gaps = 26/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN +DEA AGY + +EV + D S +V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNCIDEAMAGYCTEVEVTINTDGSCTVEDNGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF +S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKNS--YKVSGGLHGVGVSCVNALSTRMKSQVYRDGHIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ V + D++GTR +FWPD +FTT F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYP----VKMIGDTDKRGTRQQFWPDPTIFTTTT-FQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + + F GL+E+V++++ ++ L D V+ + + G+ I+
Sbjct: 204 GIKITLTDLRPDPETGKTRQEVFHAKDGLKEFVRYIDRHRQHLFDDVIYLKTEKQGVPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS----KTVKDKDI 293
+A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR + + K ++ I
Sbjct: 264 VAIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRMALTRVMKNYADNDPQIRKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++ E REGLT +IS++V P+FEGQTKT+LGN EV V+Q+V E LT YLE HPD
Sbjct: 323 EVASEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTNYLEEHPDEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I K + A A +AA++AR+ V++KSV+ S LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 HKICEKVILAATARIAARKARESVQRKSVMGGSGLPGKLADCSNRDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK- 470
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED ++
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDDREA 502
Query: 471 --EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQ 527
+ LRY KIII+TDADVDG+HI TL++T F+R+ + +EG +Y+ PPLYK + K
Sbjct: 503 NIDKLRYDKIIIMTDADVDGSHIDTLIMTLFFRFMPKVIEEGHLYIATPPLYKCTFKSKI 562
Query: 528 VQYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
QYCY+D + L K + ++++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I
Sbjct: 563 SQYCYNDQQRQAFLDKYGNGQEGTSIHT-QRYKGLGEMNPEQLWETTMDPKTRLLKQVTI 621
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AAEA+ +FS LMG V+ R+E I++ A N+D
Sbjct: 622 ENAAEADEIFSMLMGDDVEPRREFIEDNAAYANID 656
>gi|345883105|ref|ZP_08834553.1| DNA gyrase, B subunit [Prevotella sp. C561]
gi|345044076|gb|EGW48124.1| DNA gyrase, B subunit [Prevotella sp. C561]
Length = 657
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/634 (47%), Positives = 429/634 (67%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV + DNS++V D+GRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCHNIEVTINEDNSITVEDDGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVFRNGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD +F+T + + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETDKTGTRQQFWPDPDIFSTTV-YQWSIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + I I+
Sbjct: 204 GIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKAYADNDPQISKQLEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+
Sbjct: 323 EIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALTDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + + G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEHGHLYIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + + + K + + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQAFIDKYANGDEEDKAIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|289577274|ref|YP_003475901.1| DNA gyrase subunit beta [Thermoanaerobacter italicus Ab9]
gi|289526987|gb|ADD01339.1| DNA gyrase, B subunit [Thermoanaerobacter italicus Ab9]
Length = 633
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 308/621 (49%), Positives = 433/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 27 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q
Sbjct: 87 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVVVKQRGKIFRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + GT I F PDK++F + F+++ +A R+RELAFLN
Sbjct: 145 TYERGVPKTELEIIG----ETEETGTTITFKPDKEIFEETV-FNYDVLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++
Sbjct: 200 GINIRLIDE-RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D Y++ + +AN+I T +GGTH+ G K++LT+ +N +K +KD + +L GE
Sbjct: 255 CMQY-NDTYTENIFSFANNIDTREGGTHLVGFKSALTKVINDYARKYGIIKDNEKNLQGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+
Sbjct: 314 DVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVENVVIEKLSAFLEENPSVAKVIVE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ A +A AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK
Sbjct: 374 KATQAARAREAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK+
Sbjct: 434 TGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKV 492
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL
Sbjct: 493 VIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDKELD 552
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 553 RILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKRTILKVTLEDAIAADEIFTILMG 611
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 612 DKVEPRREFIERYAKTVRNLD 632
>gi|338214332|ref|YP_004658393.1| DNA gyrase subunit B [Runella slithyformis DSM 19594]
gi|336308159|gb|AEI51261.1| DNA gyrase, B subunit [Runella slithyformis DSM 19594]
Length = 656
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/629 (49%), Positives = 433/629 (68%), Gaps = 21/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHL++E++DN++DEA AGY IEV + DNSV+V DNGRGIP +HP
Sbjct: 37 MYIGDIGVKGLHHLIWEVVDNSIDEALAGYCDRIEVVINTDNSVTVKDNGRGIPTGMHPK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS+ L V V R+G + Q
Sbjct: 97 EKKSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSKHLRVEVHREGKIFEQ 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS GKP+ V + S D GT + F PD +FTT+ ++ + T+A RIREL+FLN
Sbjct: 155 EYSIGKPLYP----VRAIGSADDTGTFVHFLPDDSIFTTS-EYKYETVANRIRELSFLNK 209
Query: 181 KLTIALRKEDSDPEKNQ--YNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGIT-ID 237
+T+ L E Q Y E+ GGL E+V +L++ + L + ++ G+ ++
Sbjct: 210 GITLTLTDLRDLDESGQPRYEEFHSQGGLVEFVTYLDSTRDHLIPTPIYMENEKGVVPVE 269
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +YS+ ++ Y N+I TI+GGTH+ G + +LTRTL + KS + + I +SG
Sbjct: 270 VAMIYNT-SYSENVVSYVNNINTIEGGTHVSGFRMALTRTLKNYADKSGILAKEKIEISG 328
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN +V V Q V E L +L+ +P +I+
Sbjct: 329 DDFREGLTAVISVKVQEPQFEGQTKTKLGNSDVAGAVSQVVSEMLDNFLQENPKEARTIV 388
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A KA +AA++AR++V++K+VL + LPGKLADCS T P E+++VEGDSAGGSA
Sbjct: 389 DKVILAAKARIAARKAREMVQRKTVLGGTGLPGKLADCSETDPAGCELYLVEGDSAGGSA 448
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----- 472
KQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+I ALG+ V G+D + A
Sbjct: 449 KQGRNRAFQAILPLRGKILNVEKAQEYKIYENEEIKNMITALGV-VFGKDGDERALNMDK 507
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHK+II+TDADVDG+HIRTL+LTFF+RY K L D G +Y+ PPLY V++GK+ +YC+
Sbjct: 508 LRYHKVIIMTDADVDGSHIRTLILTFFFRYMKDLIDSGFVYIAQPPLYLVKKGKEERYCW 567
Query: 533 DDAELKKVKSSFP---SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+A+ ++ +++Y IQR+KGLGEM P QLWETT++P +R LKQ+ IE AAEA
Sbjct: 568 TEAQREQAVMEIAGGKEDSVY-IQRYKGLGEMNPEQLWETTMDPSRRSLKQVSIESAAEA 626
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A +D
Sbjct: 627 DHLFSMLMGDEVAPRREFIERNAKYARVD 655
>gi|145578005|gb|ABP82721.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar bolivia]
Length = 632
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 427/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+++ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIYEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|167038684|ref|YP_001661669.1| DNA gyrase subunit B [Thermoanaerobacter sp. X514]
gi|300913756|ref|ZP_07131073.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561]
gi|307723227|ref|YP_003902978.1| DNA gyrase subunit B [Thermoanaerobacter sp. X513]
gi|166852924|gb|ABY91333.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter sp. X514]
gi|300890441|gb|EFK85586.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561]
gi|307580288|gb|ADN53687.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X513]
Length = 633
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 308/621 (49%), Positives = 433/621 (69%), Gaps = 18/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN++DEA AGY NI V + DNS++V D+GRGIP D+HP
Sbjct: 27 MYIGSTGSRGLHHLVYEVVDNSIDEALAGYCKNIVVTIHKDNSITVEDDGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E LT+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q
Sbjct: 87 VGKPAVEVALTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVVVKQRGKIFRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P T L + GT I F PDK++F + F+++ +A R+RELAFLN
Sbjct: 145 TYERGVPKTDLEIIG----ETEETGTTITFKPDKEIFEETV-FNYDVLAQRLRELAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDL 238
+ I L E D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++
Sbjct: 200 GINIRLIDE-RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEV 254
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+Q+ +D Y++ + +AN+I T +GGTH+ G K++LT+ +N +K +KD + +L GE
Sbjct: 255 CMQY-NDTYTENIFSFANNIDTREGGTHLVGFKSALTKVINDYARKYGIIKDNEKNLQGE 313
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT I+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+
Sbjct: 314 DVREGLTAIVSVKLKNPQFEGQTKTKLGNSEMRSIVENVVIEKLSAFLEENPSVAKVIVE 373
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K+ A +A AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK
Sbjct: 374 KATQAARAREAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAK 433
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GR+ RFQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK+
Sbjct: 434 TGRNSRFQAILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKV 492
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDG+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL
Sbjct: 493 VIMTDADVDGSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDRELD 552
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG
Sbjct: 553 RILNEIGREN-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMG 611
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 612 DKVEPRREFIEKHAKTVRNLD 632
>gi|448667078|ref|ZP_21685679.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
gi|445770600|gb|EMA21659.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
Length = 642
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/614 (49%), Positives = 420/614 (68%), Gaps = 15/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GIT 235
+ I++ D + + + GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISI----IDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQ 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+Q D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L
Sbjct: 260 VEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++
Sbjct: 319 KGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGG
Sbjct: 379 IVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY
Sbjct: 439 SAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DA
Sbjct: 498 EKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGDTYDAMTDA 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E K+ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 558 ERDKIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNI 617
Query: 596 LMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 618 LMGDAVEPRKEFIK 631
>gi|333029415|ref|ZP_08457476.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
gi|332740012|gb|EGJ70494.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
Length = 652
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 300/627 (47%), Positives = 420/627 (66%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T +GLHHLVYE++DN++DEA AGY +I+V + DNS++V DNGRGIP D H
Sbjct: 33 MYIGDTSLKGLHHLVYEVVDNSIDEALAGYCDHIDVTINEDNSITVKDNGRGIPTDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V R+G+ Y Q
Sbjct: 93 EQRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTRMITEVSRNGITYRQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+ GKP V V + D GT+ FWPD +FT + + ++ +A R+RELAFLN
Sbjct: 151 EYACGKP----QYPVKEVGTTDDTGTKQTFWPDPTIFTVLV-YSYDILATRMRELAFLNA 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L + + E Y F GL+E+V+++++ ++ L +DV+ + G+ I+
Sbjct: 206 GLKISLTDKRTQNEDGTYKSESFQSKEGLKEFVRYIDSSREHLVNDVIYLNTEKQGVPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++S+ + Y N+I TI+GGTH+ G + +LTRTL + +K + + +SG
Sbjct: 266 VAIMYNT-SFSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKLLDKIKVDISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+
Sbjct: 325 DDFREGLTAVISIKVAEPQFEGQTKTKLGNTEVMGAVDQAVGEALNYYLEEHPREAKTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR+LV++KS + LPGKLADCS PE E+F+VEGDSAGG+A
Sbjct: 385 DKVILAATARHAARKARELVQRKSPMSGGGLPGKLADCSEKNPEICELFLVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----L 473
KQGRDR FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ KEA L
Sbjct: 445 KQGRDRSFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKEANLEKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY +GK +YC+
Sbjct: 505 RYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQMIQNGYLYIATPPLYLCRKGKTEEYCWT 564
Query: 534 DAELKKVKSSF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + +++ S + IQR+KGLGEM QLWETT++P+ RMLKQ+ I++A++A+
Sbjct: 565 EEQRLAFINNYGGGSESGIHIQRYKGLGEMNAHQLWETTMDPDNRMLKQVTIDNASDADR 624
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 625 IFSMLMGEDVGPRREFIEENATYANID 651
>gi|399927980|ref|ZP_10785338.1| DNA gyrase subunit B [Myroides injenensis M09-0166]
Length = 646
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/629 (47%), Positives = 422/629 (67%), Gaps = 24/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AGY I V + DNSV+V DNGRGIP+D+H
Sbjct: 30 MYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTINVIINEDNSVTVQDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+RDG Y Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLKATVFRDGKIYEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS+GK + + V D++GT++ F PD +FT +F + T+AGR+RELAFLN
Sbjct: 148 EYSQGKALYPVKV----VGETDKKGTQVTFHPDPTIFTQVTEFSYETLAGRLRELAFLNK 203
Query: 181 KLTIALR-----KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDG 233
LTI L ED P+ +E FF+ GL+E++++L+ ++ P+ DV+ D
Sbjct: 204 GLTITLTDLREINEDGTPK----SEVFFSKDGLKEFIKFLDGNRVPIIGDVISMETDKGE 259
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
+ +++AL + +D YS+ + Y N+I T +GGTH++G + LTRTL S ++
Sbjct: 260 VPVEVALIY-NDTYSENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGLLEKLKF 318
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+
Sbjct: 319 EITGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLEAYLEEHPNDA 378
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS P+ E+F+VEGDSA
Sbjct: 379 KIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKLSDCSEQDPKLCEVFLVEGDSA 438
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK--- 470
GG+AK+GRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K
Sbjct: 439 GGTAKEGRDRNFQAILPLRGKILNVEKAMGHKVFENEEIRNIFTALGVTIGTEEDSKALN 498
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L + +++ PPLY V++G + +
Sbjct: 499 LEKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIENEHVFIATPPLYLVKKGNKKE 558
Query: 530 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y + D E ++ S A ++QR+KGLGEM QLW+TT+NPE R+L+++ I++ EA
Sbjct: 559 YAWTDEERIELMEQMGSGA--TVQRYKGLGEMNAEQLWDTTMNPEHRILRKVTIDNLQEA 616
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS LMG V R+E I+ A +D
Sbjct: 617 DRVFSMLMGDEVPPRREFIEQNATYAKID 645
>gi|190710595|gb|ACE95128.1| gyrase subunit B [Bacillus thuringiensis serovar pondicheriensis]
Length = 627
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/615 (50%), Positives = 422/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|237741012|ref|ZP_04571493.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13]
gi|229431056|gb|EEO41268.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13]
Length = 635
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 308/625 (49%), Positives = 419/625 (67%), Gaps = 20/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVIDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTIHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ + GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KIIGACDVNEHGTIVRFKADAEIFETLI-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGIT 235
LTI L D +K + Y F GG+ +++ + D +KP + + D +
Sbjct: 198 GLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDTTIIEKPFY----VSSEQDNVG 251
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+D+ + + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L
Sbjct: 252 VDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKL 310
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++
Sbjct: 311 MGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKV 370
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGG
Sbjct: 371 IIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGG 430
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY
Sbjct: 431 SAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRY 489
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D
Sbjct: 490 GKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVASGKQIVYAYNDL 549
Query: 536 ELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F
Sbjct: 550 ELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFD 609
Query: 595 SLMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+E I+ A V N+D
Sbjct: 610 KLMGDKVEPRREFIEEHAEYVKNID 634
>gi|319900374|ref|YP_004160102.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
gi|319415405|gb|ADV42516.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
Length = 657
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/631 (48%), Positives = 420/631 (66%), Gaps = 20/631 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISENGLHHLVYEVVDNSIDEAMAGYCDHIEVTINEDNSITVQDNGRGIPVDWHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+R+G Y Q
Sbjct: 93 EQKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + + + GT+ FWPD +FT + ++ H T+ R+RELA+LN
Sbjct: 151 EYECGKPLYAVK--EMGLCEPGLSGTKQTFWPDDSIFTVS-EYKHTTLQARLRELAYLNK 207
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L D E EYF + G++E+V++LN++ PL D V+ + G+ I+
Sbjct: 208 GIRITLTDLRVKDEEGKPLTEYFHSEEGVKEFVRYLNSNNTPLFDDVIYLNTEKSGVPIE 267
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK--SKTVKDKDISL 295
A+ + + Y + + Y N+I T +GGTH G +A+LTR L SK ++ + +
Sbjct: 268 CAIMY-NTGYRENLHSYVNNINTREGGTHEGGFRAALTRVLKKYADDNCSKALEKAKVEI 326
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E L+ YLE HP
Sbjct: 327 SGEDFREGLIAVISVKVSEPQFEGQTKTKLGNNEVSGAVNQAVGEALSNYLEEHPKEAKV 386
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K L A A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGG
Sbjct: 387 IVDKVLLAATARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGG 446
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK--- 470
SAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+
Sbjct: 447 SAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDSEDSKEANI 506
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
+ LRY K+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY +GK +Y
Sbjct: 507 DKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQNGYLYIATPPLYLCSKGKVKEY 566
Query: 531 CYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 587
C+ D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AA
Sbjct: 567 CWTDQQRQKFIDAYGGGSENAIHT-QRYKGLGEMNPDQLWETTMNPENRMLKQVHLENAA 625
Query: 588 EANVVFSSLMGARVDTRKELIQNAANLVNLD 618
EA+ VFS LMG V R++ I++ A N+D
Sbjct: 626 EADYVFSMLMGEDVGPRRDFIESNATYANID 656
>gi|212692798|ref|ZP_03300926.1| hypothetical protein BACDOR_02296 [Bacteroides dorei DSM 17855]
gi|237709487|ref|ZP_04539968.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|265754693|ref|ZP_06089745.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|345514532|ref|ZP_08794043.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|423230241|ref|ZP_17216645.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|423241032|ref|ZP_17222146.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|423243952|ref|ZP_17225027.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
gi|212664587|gb|EEB25159.1| DNA gyrase, B subunit [Bacteroides dorei DSM 17855]
gi|229436655|gb|EEO46732.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|229456543|gb|EEO62264.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|263234807|gb|EEZ20375.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|392631750|gb|EIY25719.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|392643094|gb|EIY36852.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|392643470|gb|EIY37220.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
Length = 654
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/631 (48%), Positives = 414/631 (65%), Gaps = 23/631 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q
Sbjct: 93 EKKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRGGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLN 179
+YS G P+ + V V + D GT+ FWPD +FT T +FD + R+RELA+LN
Sbjct: 151 EYSCGHPLYS----VKEVGTADITGTKQTFWPDDTIFTVTEYKFD--ILQARMRELAYLN 204
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
+TI+L E + + F G++E+V++LN + + L DV+ + + I
Sbjct: 205 KGITISLTDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNRNNEALIDDVIYLNTEKNNTPI 264
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ A+ + + Y +++ Y N+I TI+GGTH G +++LTR L + +K ++ + +S
Sbjct: 265 ECAIMY-NTGYRESLHSYVNNINTIEGGTHEAGFRSALTRVLKKYAEDTKALEKAKVEIS 323
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I
Sbjct: 324 GEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTYYLEEHPKEAKQI 383
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A +AA++AR+ V++KS + LPGKLADCSS PEE E+F+VEGDSAGGS
Sbjct: 384 VDKVILAATARIAARKARESVQRKSPMGGGGLPGKLADCSSRNPEECELFLVEGDSAGGS 443
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG--LGVKGEDFKKEA-- 472
AKQGR R FQAILPLRGKILNVE+ ++++E+ N+I ALG GV G D K+A
Sbjct: 444 AKQGRSRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIITALGVRFGVDGNDDSKKANI 503
Query: 473 --LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
LRYHK++I+TDADVDG+HI TL++T FYRY + + G +Y+ PPLYK +GK +Y
Sbjct: 504 DKLRYHKVVIMTDADVDGSHIDTLIMTLFYRYMPEIIENGHLYIANPPLYKCSKGKISEY 563
Query: 531 CYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 587
CY + + + N +++ QR+KGLGEM P QLWETT+NPE R+LKQ+ I++AA
Sbjct: 564 CYTEEARQAFIQKYGDGQENGIHT-QRYKGLGEMNPEQLWETTMNPETRILKQVTIDNAA 622
Query: 588 EANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 623 NVDYIFSMLMGDDVAPRREFIEKNATYANID 653
>gi|344211462|ref|YP_004795782.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
gi|343782817|gb|AEM56794.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
Length = 642
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/614 (49%), Positives = 421/614 (68%), Gaps = 15/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GIT 235
+ I++ D + + + GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISI----IDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQ 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+Q +D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L
Sbjct: 260 VEIAMQ-GTDDLQGSIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++
Sbjct: 319 KGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGG
Sbjct: 379 IVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY
Sbjct: 439 SAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DA
Sbjct: 498 EKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDA 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E K+ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 558 ERDKIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNI 617
Query: 596 LMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 618 LMGDAVEPRKEFIK 631
>gi|145577997|gb|ABP82717.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar pulsiensis]
Length = 632
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + + IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELSAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|392970924|ref|ZP_10336322.1| DNA gyrase subunit B [Staphylococcus equorum subsp. equorum Mu2]
gi|392510926|emb|CCI59581.1| DNA gyrase subunit B [Staphylococcus equorum subsp. equorum Mu2]
Length = 640
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 421/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA +E+ + DN + V DNGRGIP+ +
Sbjct: 30 MYIGSTSARGLHHLVWEIVDNSIDEALAGYADEVEIVIEEDNWIKVTDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V++D YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVYKDNKIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Y +G P L + D+ GT IRF D ++FT +++++T+ R RELAFLN
Sbjct: 148 AYKKGVPQFDLKV----IGETDKPTGTVIRFKADPEIFTETTEYNYDTLQQRTRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
++I LR E E+ + + Y + GG++ YV+ LN K+PLHD + + D I +++
Sbjct: 204 KGISITLRDERE--EEVREDSYHYEGGIKSYVEMLNETKEPLHDEPIYVHESKDDIEVEI 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ + Y+ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE
Sbjct: 262 ALQY-NKGYATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E +L +P V ++
Sbjct: 321 DTREGLTAVVSIKHSDPQFEGQTKTKLGNSEVRQVVDKLFAELFERFLYENPQVGRIVVE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
KS+ A A LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K
Sbjct: 381 KSIMASHARLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI
Sbjct: 441 SGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL
Sbjct: 500 VLMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELD 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+K + +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ VF LMG
Sbjct: 560 KLKEELDPSPKWSISRYKGLGEMNADQLWETTMNPEHRALLQVSLEDAIEADQVFEMLMG 619
Query: 599 ARVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 620 DVVENRRQFIEDNAVYANLD 639
>gi|421186532|ref|ZP_15643923.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
gi|399966874|gb|EJO01375.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
Length = 652
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 300/618 (48%), Positives = 414/618 (66%), Gaps = 11/618 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN +DEA AG+A ++ + + DNS+++ D+GRG+P+++ P
Sbjct: 38 MYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLTIEKDNSITITDDGRGVPVEIQPK 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E V T+LHAGGKF S Y VSGGLHGVG SVVNALS+ ++V V+RD Y+
Sbjct: 98 TGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGASVVNALSKEMDVRVYRDNKIYYM 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG T + P+ K +GT + F PD +F I FD+ T+A RIRELAFLN
Sbjct: 156 DFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIFRETIVFDYRTLASRIRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L +++ + DP KN+ + + GG+ EYV++LN +K+PL + V + +GI +++A
Sbjct: 214 GLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKNKQPLFPEPVYVEGEENGIQVEVA 271
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +DA ++T++ + N+I T +GGTH G K +LTR +N KK +KD D LSGE
Sbjct: 272 LQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTRIINDYAKKKGILKDSDDPLSGED 330
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+ ++ +P+ +I +K
Sbjct: 331 VREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNHQFSTIFNRFMMENPETARAIANK 390
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA +AAK+ARDL R+KS L S+L GKLAD +S PE SE+FIVEGDSAGGSAKQ
Sbjct: 391 GLIASKARVAAKKARDLTRKKSGLEISALAGKLADNTSRDPEISELFIVEGDSAGGSAKQ 450
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R QAILP+RGKILNVE+ + NEEI++L A+G G GE+F YHK+I
Sbjct: 451 GRSRLTQAILPIRGKILNVEKATLDKVLANEEIRSLFTAMGTGF-GEEFDISKAHYHKVI 509
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY--DDAEL 537
I+TDADVDGAHIRTLLLT F+RY + L D G IY+ PPLY V G Q Y D EL
Sbjct: 510 IMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYIYIAQPPLYGVAIGNSDQRVYLDSDEEL 569
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ ++ P++ IQR+KGLGEM VQLW+TT++P+ R L ++ E E + F LM
Sbjct: 570 DQYTATLPASPKPRIQRYKGLGEMDAVQLWDTTMDPKHRRLLRVDPEYQPEVDTTFDMLM 629
Query: 598 GARVDTRKELIQNAANLV 615
G RV+ R+E I++ A V
Sbjct: 630 GDRVEPRREFIEDNAQFV 647
>gi|429190218|ref|YP_007175896.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|448326129|ref|ZP_21515498.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|429134436|gb|AFZ71447.1| DNA gyrase, B subunit [Natronobacterium gregoryi SP2]
gi|445613038|gb|ELY66749.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
Length = 644
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 305/616 (49%), Positives = 423/616 (68%), Gaps = 10/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V + D SVSV D+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHEDRSVSVTDDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVYRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++S + GT IRFWPD +F + +F +T+A R+RELAFLN
Sbjct: 145 AFEGGEPVGDME-RVRDMESDEETGTEIRFWPDGSIFESD-EFSFSTLANRLRELAFLNS 202
Query: 181 KLTIALR--KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I LR +ED+D E Y + GG+ E+V++LN + +H+ V+ F + I +
Sbjct: 203 GVRITLRDEREDADDAAGVATETYEYEGGIREFVEYLNETRSAMHETVIYFEDETQNIHV 262
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q + ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L
Sbjct: 263 EVAMQ-ATKELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLSDLDENLK 321
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT ++S++ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E PD ++I
Sbjct: 322 GEDIREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLGTYFEEQPDTAEAI 381
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K++ A KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGS
Sbjct: 382 VTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGS 441
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY
Sbjct: 442 AKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYK 500
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY+V + +AE
Sbjct: 501 KIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTEAE 560
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + +QRFKGLGEM P QLW+TT+NP+ R+LKQ+ IEDAA A+ +FS L
Sbjct: 561 RDEIVAEKCDGNPTQVQRFKGLGEMNPQQLWDTTMNPDNRILKQITIEDAAAADKMFSVL 620
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I+ A
Sbjct: 621 MGDAVEPRKQFIKENA 636
>gi|345881483|ref|ZP_08833001.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
gi|343919448|gb|EGV30195.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
Length = 656
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/634 (48%), Positives = 426/634 (67%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY ++IE+ + DNSV+V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEITINEDNSVTVEDNGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVYRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V ++GTR +FWPD +FTT F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTIFTTTT-FKWDIVASRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I LR + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLRDLRPNEEGKTREEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKAYADAEPSIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++KSV+ LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 KICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCTYKKVSE 562
Query: 530 YCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
YCY + + K V+ AL++ QR+KGLGEM P QLWETT++P QR+LKQ+ I+
Sbjct: 563 YCYTEQQRQAFIDKYVEGKEDDKALHT-QRYKGLGEMNPDQLWETTMDPAQRLLKQVTIQ 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R+ I+ A N+D
Sbjct: 622 NAAEADEIFSMLMGDDVEPRRVFIEENATYANID 655
>gi|302391744|ref|YP_003827564.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302203821|gb|ADL12499.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 637
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 305/620 (49%), Positives = 427/620 (68%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLV+E +DN++DE AG+ I+V + + +SV D GRGIP+++HP
Sbjct: 29 MYIGSTGTKGLHHLVWEAVDNSIDEFLAGHGEEIKVKIKEGSIISVEDQGRGIPVEVHPD 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A + VLT LHAGGKF SSGY VSGGLHGVG+SVVNALSE LE+T+WR+G Y Q
Sbjct: 89 KKLPAAQLVLTTLHAGGKF--DSSGYKVSGGLHGVGISVVNALSEWLELTIWRNGYTYTQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G PVT +S + GT+I F PD+ +F +++ + +A R++E AFLN
Sbjct: 147 QYEKGVPVTEFE----KSNSTTKTGTKIEFKPDEDIFDN-VKYKFDVLANRLQESAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I+L D+ P + Y + GGLE ++ +LN D+ LHD +V ++VD +++A
Sbjct: 202 GLKISLV--DTRPGLEKEVTYQYDGGLEAFIDYLNQDRDLLHDDIVYLEEEVDDTYVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ + ++++ + +AN+I T DGG H+ G K +LTR N+ K + +K D L+G
Sbjct: 260 FQY-NKSFNERIYSFANNINTHDGGYHLTGFKTALTRAFNNYAKDNNLLKKSDPKLTGRD 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +++V++ P+FEGQTK +LGN E+R VV+ +V YL +YL H D+ +++K
Sbjct: 319 LREGLTAVVNVKLTEPQFEGQTKAKLGNSEIRSVVEGAVYNYLNQYLPRHHDMAKEVINK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A+KA AAK+A++L ++K VL ++SLPGKL+DCSS EESE+++VEGDSAGGSAKQ
Sbjct: 379 ALEAVKARKAAKKAKELTKRKGVLNNNSLPGKLSDCSSRKSEESELYLVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKILNVER + N EI +I ALG G+ GE+F + LRYHKII
Sbjct: 439 GRNRDFQAILPLKGKILNVERARLNKIINNNEIAAIITALGTGI-GEEFNIDKLRYHKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI TL+LT FYRY L EG +YV PPLYKV +Y Y D +L+K
Sbjct: 498 IMTDADVDGAHICTLILTLFYRYMPELIREGHVYVAQPPLYKVTYRGDEEYIYTDKQLQK 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + SIQR+KGLGEM P QLWETT+NPE R L+++++++ EA+ +F+ LMG+
Sbjct: 558 YLADLDRSKV-SIQRYKGLGEMNPSQLWETTMNPENRKLQEIMVDEEREADSIFTRLMGS 616
Query: 600 RVDTRKELIQNAANLV-NLD 618
+ R+E I A+L NLD
Sbjct: 617 KAKLRREFIMANADLASNLD 636
>gi|392389999|ref|YP_006426602.1| DNA gyrase subunit B [Ornithobacterium rhinotracheale DSM 15997]
gi|390521077|gb|AFL96808.1| DNA gyrase, B subunit [Ornithobacterium rhinotracheale DSM 15997]
Length = 649
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/629 (49%), Positives = 431/629 (68%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AGY S I+V + S++V DNGRGIP+D H
Sbjct: 28 MYIGDVGKRGLHHLVYEVVDNSIDEALAGYCSMIDVIIHEGESITVKDNGRGIPVDFHKK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T + AGGKF S Y VSGGLHGVG+S VNALS L TV+R+G Y Q
Sbjct: 88 EGKSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSNKLTATVYRNGKIYQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+RGK + V + DR GT + F PD +F ++ T+A R+REL+FLN
Sbjct: 146 EYARGKAL----GDVQEIGETDRTGTTVTFSPDDSIFNHT-EYSFETLAARLRELSFLNK 200
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITID 237
++I L E E Y +E F + GGL+E+V++++ +++PL V F + ++D I ++
Sbjct: 201 GISITLTDERVKDENGNYLSEVFHSEGGLKEFVEFIDENREPLMQKVIFMEGEIDDIPVE 260
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLS 296
+A+++ + ++++ + Y N+I T +GGTH+ G + +LTRTL + + K+KD IS++
Sbjct: 261 VAMRYNT-SFNENLHSYVNNINTHEGGTHLTGFRRALTRTLKKYADEKMSAKEKDKISIT 319
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT ++SV+V P+FEGQTKT+LGN EV VD+ V E LT YLE +P I
Sbjct: 320 GDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEVSGAVDKIVSEMLTNYLEENPSEAQII 379
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A KA AAK+AR++V++KS + S LPGKLADCSS P ESEIF+VEGDSAGG+
Sbjct: 380 VDKVVLAAKARQAAKKAREMVQRKSPMGGSGLPGKLADCSSKDPYESEIFLVEGDSAGGT 439
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EA 472
AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K E
Sbjct: 440 AKQGRDRHFQAILPLRGKILNVEKAMQHKVFENEEIKNIFTALGVTIGTEEDAKALNTEK 499
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKI+I+TDADVDG+HI TL+LTFF+RY K L + G IY+ PPLY +++GKQ Y +
Sbjct: 500 LRYHKIVIMTDADVDGSHIATLILTFFFRYMKELIENGNIYIATPPLYLLKKGKQEIYAW 559
Query: 533 DDAELKKVKSSFPSNAL---YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D E ++++ + S+QR+KGLGEM QLW+TT+NPE R L+Q+ IE+A+EA
Sbjct: 560 GDKEREEIQRQMSPDGTGRGISVQRYKGLGEMNAEQLWDTTMNPENRKLRQVNIENASEA 619
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 620 DRIFSMLMGDDVPPRREFIEKNAVYANID 648
>gi|340618721|ref|YP_004737174.1| DNA gyrase subunit B [Zobellia galactanivorans]
gi|339733518|emb|CAZ96895.1| DNA gyrase, subunit B [Zobellia galactanivorans]
Length = 650
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 293/625 (46%), Positives = 420/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA G+ I V + DNS++ DNGRGIP+DLH
Sbjct: 34 MYIGDVGVRGLHHLVYEVVDNSIDEAMGGHCDTISVIINEDNSITTRDNGRGIPVDLHKK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+SVVNALS+ L+ TV+RDG + Q
Sbjct: 94 EGISALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSVVNALSDRLKATVYRDGKIWEQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V + + +GT + F PD Q+F I++ + T+A R+REL+FLN
Sbjct: 152 EYERGKALYP----VKSIGETEERGTMVTFHPDDQIFQQTIEYSYETLANRMRELSFLNK 207
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI++ EK ++ +E F++ GL+E+V++L+ +++PL V+ + + I ++
Sbjct: 208 GVTISITDRRQKDEKGEFLSETFYSDEGLKEFVKFLDGNREPLIQSVISMEGEKNDIPVE 267
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL S ++ + G
Sbjct: 268 VAMIYNT-SYTENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGMLEKLKFEVQG 326
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L++YLE HPD I+
Sbjct: 327 DDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVSSAVSQAVSEMLSDYLEEHPDDAKVIV 386
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA +AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+A
Sbjct: 387 QKVILAAQARHAATKAREMVQRKTVMSIGGLPGKLSDCSEQDPTQCEVFLVEGDSAGGTA 446
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
K GRDR+FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + ED K E L
Sbjct: 447 KMGRDRKFQAILPLRGKILNVEKAMQHKVFENEEIKNIYTALGVTIGTEDDSKALNLEKL 506
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G + +Y +
Sbjct: 507 RYHKVVIMCDADVDGSHIETLILTFFFRYMRELIEGGHVYIATPPLYLVKKGSKKRYAWS 566
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E ++ S+ SIQR+KGLGEM QLW+TT+NPE R L+Q+ I++A E + VF
Sbjct: 567 DKERDEIADSYSGGV--SIQRYKGLGEMNAEQLWDTTMNPEFRTLRQITIDNATETDRVF 624
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 625 SMLMGDEVPPRREFIEKNAVYANID 649
>gi|403045150|ref|ZP_10900628.1| DNA gyrase subunit B [Staphylococcus sp. OJ82]
gi|402765214|gb|EJX19298.1| DNA gyrase subunit B [Staphylococcus sp. OJ82]
Length = 640
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 421/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AGYA +E+ + DN + V DNGRGIP+ +
Sbjct: 30 MYIGSTSARGLHHLVWEIVDNSIDEALAGYADEVEIVIEEDNWIKVTDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V++D YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVYKDNKIYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Y +G P L + D+ GT IRF D ++FT +++++T+ R RELAFLN
Sbjct: 148 AYKKGIPQFDLKV----IGETDKPTGTVIRFKADPEIFTETTEYNYDTLQQRTRELAFLN 203
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
++I LR E E+ + + Y + GG++ YV+ LN K+PLHD + + D I +++
Sbjct: 204 KGISITLRDERE--EEVREDSYHYEGGIKSYVEMLNETKEPLHDEPIYVHESKDDIEVEI 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ + Y+ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE
Sbjct: 262 ALQY-NKGYATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT ++S++ +P+FEGQTKT+LGN EVR+VVD+ E +L +P V ++
Sbjct: 321 DTREGLTAVVSIKHSDPQFEGQTKTKLGNSEVRQVVDKLFAELFERFLYENPQVGRIVVE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
KS+ A A LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K
Sbjct: 381 KSIMASHARLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI
Sbjct: 441 SGRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL
Sbjct: 500 VLMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELD 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+K + +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ VF LMG
Sbjct: 560 KLKEELDPSPKWSISRYKGLGEMNADQLWETTMNPEHRALLQVSLEDAIEADQVFEMLMG 619
Query: 599 ARVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 620 DVVENRRQFIEDNAVYANLD 639
>gi|256846674|ref|ZP_05552130.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294784381|ref|ZP_06749672.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
gi|256717894|gb|EEU31451.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294487953|gb|EFG35308.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
Length = 639
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/625 (49%), Positives = 419/625 (67%), Gaps = 20/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVIDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++Q
Sbjct: 87 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTIHYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ + GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 145 KYHRGKPEEDV--KVIGTCDESEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGIT 235
LTI L D +K + Y F GG+ +++ + D +KP + + D +
Sbjct: 202 GLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKDDTTIIEKPFY----VSSEQDNVG 255
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+D+ + + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L
Sbjct: 256 VDVTFTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKL 314
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G +REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++
Sbjct: 315 MGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKI 374
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGG
Sbjct: 375 IIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGG 434
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY
Sbjct: 435 SAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRY 493
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D
Sbjct: 494 GKIILMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVASGKQIVYAYNDL 553
Query: 536 ELKKVKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
ELK V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F
Sbjct: 554 ELKNVLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFD 613
Query: 595 SLMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R+E I+ A V N+D
Sbjct: 614 KLMGDKVEPRREFIEEHAEYVKNID 638
>gi|327401204|ref|YP_004342043.1| DNA gyrase subunit B [Archaeoglobus veneficus SNP6]
gi|327316712|gb|AEA47328.1| DNA gyrase, B subunit [Archaeoglobus veneficus SNP6]
Length = 621
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/619 (51%), Positives = 425/619 (68%), Gaps = 22/619 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHL++EI+DN++DEA AG+ NI V L D S SV D+GRGIP ++H
Sbjct: 23 MYIGGIGLRGLHHLLWEIVDNSIDEALAGHCKNITVTLHKDGSASVEDDGRGIPTEVH-E 81
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E VLT LHAGGKF + Y V+GGLHGVGLSVVNALSE LEV V R+G Y+Q
Sbjct: 82 LGRPAVEIVLTKLHAGGKF--NKKAYKVAGGLHGVGLSVVNALSEWLEVWVKRNGKIYYQ 139
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PVT L + GT+IRF PD+++F T +F + +A R++ELA+LN
Sbjct: 140 KYERGVPVTPLQV----IGETKETGTKIRFKPDEEIFETT-EFRWDIVAQRLKELAYLNK 194
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+ + L E S K Y+E G++ +V LN +K +HDV+ F ++ +GI +++A+
Sbjct: 195 GIRLKLIDERSGKSKEFYSE----DGIKGFVAQLNKNKPVIHDVIHFSEEKNGIMVEVAI 250
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D + +L +AN+I TI+GGTH G +A LTR +N GKK VK K L+G +
Sbjct: 251 QF-TDTEIENVLFFANNINTIEGGTHAVGFRAGLTRAINEFGKKY--VK-KFKPLTGADI 306
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT ++SV+VP P+FEGQTKT+L N EV+ VV+ V + ++LE HP+ + I+ K
Sbjct: 307 REGLTAVVSVKVPEPQFEGQTKTKLTNSEVKTVVESIVYSEVLKWLEEHPNEANRIIEKC 366
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ A+KA AA++AR++VR+K + S +LPGKLADCSS PEE E+FIVEG+SAGGSAKQ
Sbjct: 367 ILAMKAREAARKAREIVRRKGEI-SITLPGKLADCSSKNPEERELFIVEGESAGGSAKQA 425
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILP+RGKI+NVE+ A +NEEI+ + A+ G+DF RY ++II
Sbjct: 426 RDRRFQAILPIRGKIINVEKAGMAKALRNEEIKAIAAAI-GAGIGKDFDITKARYRRVII 484
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPLY+V++GK+V Y Y D EL+ +
Sbjct: 485 MTDADVDGAHIRTLLLTFFYRYMKPLIESGYLYIAQPPLYRVKKGKKVYYVYSDRELEDL 544
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
NA +QR+KGLGEM P QLWETT+NP R L Q+ +EDAA A +FS LMG
Sbjct: 545 LERI-GNA--EVQRYKGLGEMNPEQLWETTMNPHNRYLIQVTLEDAARAEELFSVLMGED 601
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ RK I +++ + NLD
Sbjct: 602 VEARKRFIMEHSKEVRNLD 620
>gi|326335208|ref|ZP_08201404.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692616|gb|EGD34559.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 656
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/633 (47%), Positives = 428/633 (67%), Gaps = 22/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE+LDN++DEA AGY I V + DNS++V DNGRGIP+D+H
Sbjct: 30 MYIGDVGMRGLHHLVYEVLDNSIDEALAGYCDTISVFINPDNSITVEDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+SVVNALS L TV+RDG E+ Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKGS--YKVSGGLHGVGVSVVNALSTHLTATVYRDGKEWQQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG + + V + +++GT++ F PD ++F +I+F ++ +A RIRELAFLN
Sbjct: 148 EYERGVALYS----VKEIGETNKRGTKVTFLPDTEIFQQSIEFSYDILASRIRELAFLNK 203
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L +E D K E++ GL E++Q+L+ ++ P+ ++ + + I ++
Sbjct: 204 GIRITLTDLREKDDQGKPLSQEFYSEKGLVEFIQYLDGNRPPIISKIISMEGEKNEIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS----KTVKDKD- 292
+A+ + +D++++ + Y N+I T +GGTH++G + LTRTL + KS K KDK
Sbjct: 264 VAMVY-NDSFNENLHSYVNNINTHEGGTHLQGFRMGLTRTLKNYADKSGLLEKASKDKKN 322
Query: 293 -ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 351
+ +SG+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+
Sbjct: 323 PLEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVTAAVSQAVSEMLESYLEENPE 382
Query: 352 VLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
+I++K + A +A LAAK+AR+ V++KS + + LPGKLADC PE E+F+VEGD
Sbjct: 383 DAKTIVNKVILAAQARLAAKKAREAVQRKSPMGGAGLPGKLADCQDKNPENCELFLVEGD 442
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK- 470
SAGG+AKQGRD++FQAILPLRGKILNVE+ + + +EEI+N+ ALG+ + ++ K
Sbjct: 443 SAGGTAKQGRDQKFQAILPLRGKILNVEKAMQHRVLDSEEIRNIYTALGVTIGTDEDSKA 502
Query: 471 ---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
LRY+KIII+ DADVDG+HI TL+LTFF+RY + L +EG IY+ PPLY +++GK+
Sbjct: 503 LNMSKLRYYKIIIMCDADVDGSHIATLILTFFFRYMRELIEEGHIYIATPPLYLLKQGKK 562
Query: 528 VQYCYDDAELKKVKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
QY + D E + + F S A ++QR+KGLGEM QL +TT++P+ R L+++ IE+
Sbjct: 563 EQYAWSDEERDAITNEFYSQAQAKVAVQRYKGLGEMNATQLADTTMDPKHRTLRKVTIEN 622
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A EA+ +FS LMG V R+E I+ A N+D
Sbjct: 623 AVEADRIFSMLMGDDVPPRREFIEKNARYANID 655
>gi|448309739|ref|ZP_21499594.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
gi|445589405|gb|ELY43638.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
Length = 640
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/615 (49%), Positives = 421/615 (68%), Gaps = 12/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHDDGSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLEVEVKRDGGVFEH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V +D + GT IRFWPD +F F +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RVRDMDPDEGTGTAIRFWPDTDIFE-GDDFAFSTLSNRLRELAFLNS 202
Query: 181 KLTIALRKE-DSD-PEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITID 237
+ I LR E D D P K Y + GG+ E+V++LN + +H D++ F D I ++
Sbjct: 203 GVRITLRDERDEDGPAKETYE---YQGGIREFVEYLNETRSAMHEDIIYFEDDDQNIEVE 259
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 260 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYAGENDLLNDLDENLKG 318
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+
Sbjct: 319 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAII 378
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA AA++A +L R+KS L S+SLPGKLADC + PE++E+FI EGDSAGGSA
Sbjct: 379 TKAVEAAKARKAAQKAEELTRRKSALDSTSLPGKLADCQTKDPEKAELFIAEGDSAGGSA 438
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY K
Sbjct: 439 KQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVDDVRYKK 497
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 498 IIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAER 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LM
Sbjct: 558 DEIVEEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLM 617
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I+ A
Sbjct: 618 GDAVEPRKQFIKEHA 632
>gi|145577963|gb|ABP82700.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
Length = 632
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
M IGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MCIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENARYVKNLD 632
>gi|338811356|ref|ZP_08623574.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
gi|337276646|gb|EGO65065.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
Length = 637
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/620 (50%), Positives = 427/620 (68%), Gaps = 17/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY + V + D+S++V DNGRGIP+ +H
Sbjct: 32 MYIGSTSARGLHHLVYEVVDNSIDEALAGYCDQVNVIIRKDDSITVIDNGRGIPVGMH-E 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALE V+TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE LEV V R+G Y
Sbjct: 91 TGKPALEVVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEWLEVQVKREGKIYQM 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG + + GT + F PD Q+F + + +T+ R+RELAFLN
Sbjct: 149 RFERGYTSQAMK----QIGETTETGTTVTFKPDAQIFEETV-YSFDTLKHRLRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I L +D + E+ F GG+ +V+ LN K LH + + + D +++A
Sbjct: 204 GLKITL----TDERSGESREFCFEGGIVSFVEHLNHSKDVLHPKPIYVEGIKDTTVVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y++ + + N+I T +GGTH+ G K +LTRT+N +K +K+ D +LSGE
Sbjct: 260 LQY-NDSYNENIFTFVNNINTQEGGTHLSGFKTALTRTMNDFARKLNLLKENDENLSGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++V P+FEGQTK++LGN E++ +VD E L+E+ E +P V I+ K
Sbjct: 319 VREGLTGVVSLKVQQPQFEGQTKSKLGNSEIKGIVDTLFSEGLSEHFEENPSVTRKIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A +A AA++ARDL R+K+ L S+LPGKLADCSS P ++EI++VEGDSAGGSAKQ
Sbjct: 379 AILASRARDAARKARDLTRRKTALEVSALPGKLADCSSRDPMQTEIYLVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKILNVE+ + NEEI+ +I A G G+ GE+F E RY +II
Sbjct: 439 GRDRRFQAILPLRGKILNVEKARLDRILNNEEIRTMITAFGSGI-GEEFDLEKSRYGRII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L + G +Y+ PPLY V++GK+ Y Y D E+ +
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMKPLIEAGRVYIAQPPLYLVKKGKEHWYLYSDPEMDQ 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + S+QR+KGLGEM P QLWETT+NPE R Q+ ++DA EA+ +F+ LMG
Sbjct: 558 LLAKIGRENI-SVQRYKGLGEMNPEQLWETTMNPEGRTNLQVTLDDAMEADEIFTILMGD 616
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I++ A+ V NLD
Sbjct: 617 KVEPRRKFIEDYAHRVRNLD 636
>gi|190710605|gb|ACE95133.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 420/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGHKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQASLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|226226219|ref|YP_002760325.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
gi|226089410|dbj|BAH37855.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
Length = 658
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/628 (49%), Positives = 426/628 (67%), Gaps = 16/628 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+A +EV + AD+S+SV D+GRGIP+D+HP
Sbjct: 36 MYIGSTSARGLHHLVYEVVDNSIDEALAGFAKRVEVTIHADDSISVEDDGRGIPVDVHPI 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E +TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L+V + RDG E+
Sbjct: 96 EKLPGVELAMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNALSDVLKVWIKRDGKEHFM 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG VTT L GT++ F PD +F +++ T+A R+RELAFLN
Sbjct: 154 DFARG--VTTTKLKTLRNVPAKETGTKVWFKPDATIFQETTRYEWATLANRLRELAFLNK 211
Query: 181 KLTIALRKEDSDPEKN--QYNEYFFA-GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I LR E D K+ E FFA GGL E+V +L +KKPLH DVV + D I I
Sbjct: 212 GIQITLRDERPDEMKDGQPREEVFFARGGLREFVVFLTGNKKPLHQDVVYLDTERDDIGI 271
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV--KDKDIS 294
++ALQ+ +D+Y+D + + N+I T +GGTH+ G K++LT +N ++S + KDK+I
Sbjct: 272 EMALQY-NDSYADNVFSFVNNINTHEGGTHLTGFKSALTSVINKYIERSSNLNKKDKEIR 330
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
LSG+ VREGLT ++SV+V P+FEGQTKT+LGN E V + E L++YLE HP +
Sbjct: 331 LSGDDVREGLTAVLSVKVREPQFEGQTKTKLGNSEAEGAVRSVMNELLSQYLEEHPKTAN 390
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K++SA +A AA++ARDL R+K+ L ++LPGKLADCS + P E+++VEGDSAG
Sbjct: 391 AIIDKAISASRAREAARKARDLTRKKNALDVAALPGKLADCSLSDPALCELYLVEGDSAG 450
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGR+R FQAILPLRGKI+NVE+ + NEEI+ +I A+G G+K E F R
Sbjct: 451 GSAKQGRNRNFQAILPLRGKIINVEKARFDKVLSNEEIRTIITAIGTGIKDE-FDLGKTR 509
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y KIII+TDADVDGAHIRTLLLTFF+R + L D G +Y+ PPLY+V +GK+ Y Y +
Sbjct: 510 YQKIIIMTDADVDGAHIRTLLLTFFFRQMRELIDAGYMYIAQPPLYRVAKGKEEFYAYSE 569
Query: 535 AELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
E +QR+KGLGEM P QLW+TT++PE R + ++ +EDA A+
Sbjct: 570 KERDSFSERLGGPEGRGNIMVQRYKGLGEMNPAQLWKTTMDPETRTMLRVTMEDAVLADQ 629
Query: 592 VFSSLMGARVDTRKELIQNAANLV-NLD 618
F +LMG V+ R++ I++ A V NLD
Sbjct: 630 TFQTLMGDDVEPRRQFIESNARFVSNLD 657
>gi|260591755|ref|ZP_05857213.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
gi|260536039|gb|EEX18656.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
Length = 657
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/634 (47%), Positives = 426/634 (67%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV + DNS++V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEVTINEDNSITVEDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVYRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V + GTR +FWPD +FTT + + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETQKTGTRQQFWPDPTIFTTTV-YQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + I I+
Sbjct: 204 GIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL S SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKSYADNDPQISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +I+++V P+FEGQTKT+LGN EV V Q+V E L++YLE HP+
Sbjct: 323 EIAGEDFREGLTAVIAIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVENEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + + L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|448649276|ref|ZP_21679989.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
gi|445773920|gb|EMA24949.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
Length = 642
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 308/615 (50%), Positives = 421/615 (68%), Gaps = 17/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V + + GT +RFWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLKPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GI 234
+ I++ D E++ E F + GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISI-----DDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPV 258
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+Q D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +
Sbjct: 259 QVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVINDYATDNNLLKDLDDT 317
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD +
Sbjct: 318 LKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAE 377
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAG
Sbjct: 378 AIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAG 437
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LR
Sbjct: 438 GSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLR 496
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ D
Sbjct: 497 YEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTD 556
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
AE + +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 557 AERDTIIEEKCDGNPTQVQRFKGLGEMNPDQLWETTMNPDNRILKQITIEDAAAADKMFN 616
Query: 595 SLMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 617 ILMGDAVEPRKEFIK 631
>gi|284165545|ref|YP_003403824.1| DNA gyrase B subunit [Haloterrigena turkmenica DSM 5511]
gi|284015200|gb|ADB61151.1| DNA gyrase, B subunit [Haloterrigena turkmenica DSM 5511]
Length = 644
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/616 (49%), Positives = 424/616 (68%), Gaps = 10/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSINDDGSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGSVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT+IRFWPD +F + +F +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RVRDMEPDEETGTQIRFWPDTGIFESG-EFSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I LR E + + Y + GG+ E+V++LN + +HD V+ F + I +
Sbjct: 203 GVHITLRDEREEATEGDDLVEETYEYQGGIREFVEYLNETRSAMHDDVIYFEAEEQNIQV 262
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N K + + D + +L
Sbjct: 263 EVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAKDNDMLGDLEDNLK 321
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ S+ E L Y E HPD +I
Sbjct: 322 GEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESSMHEGLGTYFEEHPDTAQAI 381
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K++ A KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGS
Sbjct: 382 VTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGS 441
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY
Sbjct: 442 AKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYK 500
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 501 KIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAE 560
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + +QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS L
Sbjct: 561 RDEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVL 620
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I++ A
Sbjct: 621 MGDAVEPRKQFIKDNA 636
>gi|145578007|gb|ABP82722.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
Length = 632
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/622 (50%), Positives = 426/622 (68%), Gaps = 17/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKMV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+K L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKRALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 611 GDKVEPRRNFIQENAKYVKNLD 632
>gi|257051220|ref|YP_003129053.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
gi|256689983|gb|ACV10320.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
Length = 637
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/610 (50%), Positives = 418/610 (68%), Gaps = 11/610 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AG+ +IEV + D SVSV D+GRGIPID+H
Sbjct: 27 MYIGSTDTRGLHHLVYEVVDNAIDEALAGHCDHIEVTIHDDGSVSVTDDGRGIPIDIHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V R+G + Q
Sbjct: 87 YDRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSQKLEVEVSREGNVWKQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G P LT + +D D GT IRFWPD+++F T F +T+A R+RELAFLN
Sbjct: 145 TFDHGAPADDLT-EIRSLDDPDETGTTIRFWPDEEIFETT-DFQFSTLANRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLA 239
+ I L +D + + + + GG+ E+V++LN K PLHD V + +D D I +++A
Sbjct: 203 GVEITL----ADDREERAETFQYEGGIREFVEYLNETKDPLHDEVVYFEDEDQDIQVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ ++ ++ +AN+I T +GG+H+ G K +LTR +N + + D + +L GE
Sbjct: 259 LQATTELQG-SIHAFANNINTREGGSHLTGFKTALTRVVNDYATTNDLLSDIEETLKGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +IS++ P+P+FEGQTKT+LGN EVR VV+ ++ E L Y E +P V +I+ K
Sbjct: 318 IREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGVVESAMHENLGTYFEENPAVAQAIVRK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AA++A +L R+KS L S++LPGKLADC + P +E+FI EGDSAGGSAKQ
Sbjct: 378 AVEAAKARKAAQKAEELTRRKSALESTALPGKLADCQTKDPSRAELFIAEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R+ FQA+LP+RGKILNVE+ + +NE+I+N+I ALG GV G++F + LRY KII
Sbjct: 438 ARNPDFQAVLPIRGKILNVEKHRLDRILENEQIRNIITALGTGV-GDEFDLDELRYEKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE +
Sbjct: 497 FATDADVDGAHIRTLLLTFFYRHMRPLLEGGHVYAARPPLYRIRYRGETYDAMTDAERDE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + IQRFKGLGEM P QLW+TT+NPE R LK++ I+DAA A+ +FS LMG
Sbjct: 557 IIEEKCNGNPTQIQRFKGLGEMNPQQLWDTTMNPENRFLKRITIDDAAAADKMFSVLMGD 616
Query: 600 RVDTRKELIQ 609
V+ RK+ I+
Sbjct: 617 AVEPRKQFIK 626
>gi|397772628|ref|YP_006540174.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
gi|397681721|gb|AFO56098.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
Length = 642
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/615 (49%), Positives = 424/615 (68%), Gaps = 10/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRH 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT IRFWPD +F T + +T++ R+RELAFLN
Sbjct: 144 AFEAGEPVGDME-RVRDMEPDEEPGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNS 201
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR +E++D Y + GG+ E+V +LN + +HD V+ F + I ++
Sbjct: 202 GVRITLRDEREETDAGDPVTETYEYDGGIREFVNYLNETRSAMHDDVIYFEDEAQNIQVE 261
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L G
Sbjct: 262 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDDNLKG 320
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+
Sbjct: 321 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIV 380
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K++ A KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 381 AKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSA 440
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY K
Sbjct: 441 KQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKK 499
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE
Sbjct: 500 IIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAER 559
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LM
Sbjct: 560 DAIVAEKCDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLM 619
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 620 GDAVEPRKQFIKDHA 634
>gi|448678345|ref|ZP_21689352.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
gi|445772332|gb|EMA23377.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
Length = 642
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/615 (50%), Positives = 421/615 (68%), Gaps = 17/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGYCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V ++ + GT ++FWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLEPDEETGTTVQFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GI 234
+ I++ E D + E Y+ GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISIHDERDGETETFAYD-----GGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPV 258
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+Q D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +
Sbjct: 259 QVEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDT 317
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
L G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD +
Sbjct: 318 LKGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAE 377
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAG
Sbjct: 378 VIVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAG 437
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F E LR
Sbjct: 438 GSAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIEDLR 496
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ D
Sbjct: 497 YEKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTD 556
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
AE K+ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 557 AERDKIIEEKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFN 616
Query: 595 SLMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 617 ILMGDAVEPRKEFIK 631
>gi|184154481|ref|YP_001842821.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227514123|ref|ZP_03944172.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260662542|ref|ZP_05863437.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|385811790|ref|YP_005848181.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
gi|183225825|dbj|BAG26341.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227087494|gb|EEI22806.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260553233|gb|EEX26176.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|299782689|gb|ADJ40687.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
Length = 649
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/621 (49%), Positives = 413/621 (66%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN +DEA AG+ I V + DNS+ V DNGRGIP+D+
Sbjct: 37 MYIGSTTVQGLHHLVWEIVDNGIDEALAGFCDEINVIVEPDNSIIVTDNGRGIPVDIQKE 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALETV TVLHAGGKFG + GY VSGGLHGVG SVVNALS L+V V R G EY+
Sbjct: 97 TGKPALETVFTVLHAGGKFG--NGGYKVSGGLHGVGASVVNALSTELDVKVARQGKEYYM 154
Query: 121 KYSRGKPVTTLTCHVLPVD-SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
++RG T + V+ D + GT + F PD ++F ++ NT+ R+RELAFLN
Sbjct: 155 DFARGHVNTAMK--VIKDDLPQSAHGTTVHFVPDPEIFRETTVYNINTLIDRLRELAFLN 212
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDL 238
L I + ED K + + + GG+ YV++LN + L D + + GIT+++
Sbjct: 213 KGLKITV--EDRREGKEKQESFHYEGGIRHYVEFLNEGHELLFDPPIYVEGEYKGITVEV 270
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
+LQ+ D Y +L + N+I T +GGTH G K +LTR +N G+KS +K +++LSGE
Sbjct: 271 SLQYTDD-YRSNLLTFTNNIHTYEGGTHETGFKTALTRVINDYGRKSGQIKG-NVTLSGE 328
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT ++S++ PNP+FEGQTKT+L N + R D E +T ++ +PDV I+
Sbjct: 329 DVREGLTAVVSIKHPNPQFEGQTKTKLSNSDARTATDHIFAETMTRFMMENPDVARKIVE 388
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + A KA AAKRAR++ R+KS L S+LPGKLAD +S P SE+FIVEGDSAGGSAK
Sbjct: 389 KGMLASKARDAAKRAREVTRKKSGLEISNLPGKLADNTSKDPAISELFIVEGDSAGGSAK 448
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR R QAILP+RGKILNVE+ + NEEI++L ALG G G+DF YHK+
Sbjct: 449 QGRSRLTQAILPIRGKILNVEKASLNRVLANEEIRSLFTALGTGF-GDDFDVNKANYHKL 507
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLT FYR+ + + ++G +Y+ PPLY+V +GK V+Y +D EL+
Sbjct: 508 IIMTDADVDGAHIRTLLLTLFYRFMRPMIEKGYVYIAQPPLYQVRQGKFVKYIENDEELE 567
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+V +S + IQR+KGLGEM QLWETT++P R L ++ ++DA A+ +F LMG
Sbjct: 568 RVVNSLQPSPKPVIQRYKGLGEMDAEQLWETTMDPANRHLLRVKLDDAKAADEIFQMLMG 627
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V R+E I+ A V NLD
Sbjct: 628 TKVGPRREFIEENATFVENLD 648
>gi|73661314|ref|YP_300095.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72493829|dbj|BAE17150.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 641
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/619 (50%), Positives = 415/619 (67%), Gaps = 9/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+ +
Sbjct: 30 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYADTIEVVIEKDNWIKVTDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V++D YHQ
Sbjct: 90 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYKDRKVYHQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P V+ D GT IRF D ++FT + + T+ R RELAFLN
Sbjct: 148 GYKKGVP--QFDLKVIEETDDDNTGTVIRFKADSEIFTETTTYHYETLQQRTRELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR D E+ + + Y + GG++ YV+ LN +K+PLH+ + + D I +++A
Sbjct: 206 GISITLR--DERGEEVREDTYHYEGGIKSYVEMLNENKQPLHEEPIYVHQTKDDIEVEIA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ + ++ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE
Sbjct: 264 LQY-NKGFATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGED 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT I+S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V ++ K
Sbjct: 323 TREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQIVDKLFSELFERFLYEHPQVGRIVVEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A A LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K
Sbjct: 383 GIMASHARLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTKS 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+
Sbjct: 443 GRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKIV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K
Sbjct: 502 LMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELEK 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ VF LMG
Sbjct: 562 LKAELEPTPKWSISRYKGLGEMNADQLWETTMNPENRAMLQVSLDDAIEADQVFEMLMGD 621
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 622 VVENRRQFIEDNAVYANLD 640
>gi|403389401|ref|ZP_10931458.1| DNA gyrase subunit B [Clostridium sp. JC122]
Length = 635
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/624 (50%), Positives = 440/624 (70%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ +NI+V + DNS++V D+GRG+P+ +HP
Sbjct: 27 MYIGSTSARGLHHLVYEIVDNSIDEALAGFCNNIKVTIHEDNSITVEDDGRGMPVGIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E ++TVLHAGGKFGG S LHGVG SVVNALSE V V RDG + +
Sbjct: 87 LKIPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEICTVEVKRDGHIWKE 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+SRGK ++ D GTRI F D ++F + +D++T++ R+REL+FLN
Sbjct: 145 TFSRGKVLSPFEV----AGDTDDHGTRIYFKADPEIFDD-VTYDYDTLSQRLRELSFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L +D + + E+ + GG++ +V++LN +K +H+ + G + D T+
Sbjct: 200 GIRITL----TDEREGKSQEFHYEGGIKSFVEYLNRNKGKIHNEPIYIEGIKDDC---TV 252
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++ALQ+ +D+Y++ + +AN+I TI+GGTH+ G KA+LTR +N KK +K+ D +LS
Sbjct: 253 EIALQY-NDSYNENLFSFANNIDTIEGGTHLVGFKAALTRVINDYAKKFGHLKENDKNLS 311
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT ++SV++ +P+FEGQTKT+LGN +VR +V+ + +T +LE +P V SI
Sbjct: 312 GEDVREGLTAVVSVKITDPQFEGQTKTKLGNSQVRGIVESIANDSITSFLEENPQVGKSI 371
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K L+A +A AAK+AR+L R+KSVL S+SLPGKLADCSS PEE EI+IVEGDSAGGS
Sbjct: 372 IDKGLNAARAREAAKKARELTRRKSVLESTSLPGKLADCSSKNPEECEIYIVEGDSAGGS 431
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR+R+FQAILPLRGKI+NVE++ M ++ I+++I A G G+ G+DF +RYH
Sbjct: 432 AKQGRNRKFQAILPLRGKIMNVEKQRLDKMLNSDTIKSMITAFGGGI-GKDFDVSKIRYH 490
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY + L DEG +Y+ PPLY++++GK Y Y D E
Sbjct: 491 KIIIMTDADVDGAHIRTLLLTFFYRYMRELVDEGHVYIAQPPLYRLKKGKNEYYTYSDKE 550
Query: 537 LKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
L+ ++ ++ IQR+KGLGEM QLW+TT+NPE R L ++ +EDA A+ +F+
Sbjct: 551 LENLIQEVGGKDSSVDIQRYKGLGEMNAEQLWDTTMNPENRTLLKVDVEDAMAADEIFTI 610
Query: 596 LMGARVDTRKELI-QNAANLVNLD 618
LMG +V+ R+E I +NA ++NLD
Sbjct: 611 LMGDKVEPRREFIEENAKKVINLD 634
>gi|387132329|ref|YP_006298301.1| DNA gyrase subunit B [Prevotella intermedia 17]
gi|386375177|gb|AFJ09678.1| DNA gyrase, B subunit [Prevotella intermedia 17]
Length = 656
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 307/633 (48%), Positives = 422/633 (66%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY S+IEV + DNS++V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINDDNSITVEDNGRGIPVDEHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMMSQVFRNGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD +FTT + F + +A R+RELAFLN
Sbjct: 149 EYEQGKPLYPVKI----VGDTDKTGTRQQFWPDASIFTTTV-FQWDIVARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIKITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D Y++ + Y N+I TI+GGTH+ G +A+LTRTL S +K ++ I
Sbjct: 264 AVMYNTD-YNENIHSYVNNINTIEGGTHLTGFRAALTRTLKSYADNEPQIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P
Sbjct: 323 ITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPAEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P+E EIF+VEGDSAG
Sbjct: 383 LICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK-- 469
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GE DF+
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVDGESDFEAN 502
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +
Sbjct: 503 TDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTYKKVSE 562
Query: 530 YCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
YCY + + L+K N QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+
Sbjct: 563 YCYTEQQRLQFLEKYAGGDEENKAVHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIEN 622
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A+ A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 ASTADEMFSMLMGDDVEPRREFIEQNATYANID 655
>gi|403743995|ref|ZP_10953474.1| DNA gyrase, B subunit [Alicyclobacillus hesperidum URH17-3-68]
gi|403122585|gb|EJY56799.1| DNA gyrase, B subunit [Alicyclobacillus hesperidum URH17-3-68]
Length = 651
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 421/620 (67%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DNAVDEA AG + I V + DNSVSV DNG G P+ +H
Sbjct: 44 MYIGSTSVKGLHHLVWEIVDNAVDEALAGRCTRIVVQVHPDNSVSVIDNGAGFPVGIHAK 103
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET LTVLHAGGKFGG+ GY VSGGLHGVG SVVNALSE L+V V RDG + Q
Sbjct: 104 TGRPAVETALTVLHAGGKFGGA--GYKVSGGLHGVGASVVNALSEWLKVEVHRDGKIHVQ 161
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P+ L V DR GT + F PD ++FT +F T+ R+RELAFLN
Sbjct: 162 EYERGTPLYDLKV----VGETDRTGTTVTFRPDPEIFTETTEFSAETLQNRLRELAFLNA 217
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I L E E + EY + GG++E+V +LN K L + + V D +T+++A
Sbjct: 218 GLEIVLEDER---EGGKRFEYHYEGGVKEFVLYLNHSKDVLFAEPIYVQGVKDEVTVEIA 274
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D YS T+ +AN+I T +GGTH G K++LTR +N G+++ +K D SL+G+
Sbjct: 275 LQY-NDGYSSTLYSFANNINTGEGGTHEAGFKSALTRIINDYGRRNNLIKGSDGSLTGDD 333
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV+VP P+FEGQTKT+LGN EVR +V+ E L +LE +P V IL K
Sbjct: 334 VREGLTAVVSVKVPEPQFEGQTKTKLGNSEVRGIVESLFGERLQIFLEENPAVARRILEK 393
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AAKRAR+L R K + +SLPGKL DC S PE SE+++VEGDSAGGSAK
Sbjct: 394 CVLAARAREAAKRARELTRNKK-MEVTSLPGKLTDCVSKDPEVSELYLVEGDSAGGSAKG 452
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD + QAILPLRGKI+NVE+ + NEEI+ +I A G G+ G++F RYHKI+
Sbjct: 453 GRDPQTQAILPLRGKIINVEKARLDKVLSNEEIRAIITACGTGI-GDEFDLSKARYHKIV 511
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD DG+HIR LLLT FYR+ + L D G IY+ PPLYK+E+GK ++Y Y D +L++
Sbjct: 512 IMTDADHDGSHIRILLLTLFYRFMRPLIDAGYIYIAQPPLYKIEKGKVIRYAYSDTQLEQ 571
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +QR+KGLGEM QLWETT++PE R L Q+ +EDA +A+++FS+LMG
Sbjct: 572 ALQEMGRQGV-KLQRYKGLGEMNADQLWETTMDPESRTLLQVTMEDAMDADMIFSTLMGD 630
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I A V NLD
Sbjct: 631 KVEPRRDFIAEHARYVRNLD 650
>gi|383625257|ref|ZP_09949663.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|448700123|ref|ZP_21699344.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|445780025|gb|EMA30936.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
Length = 644
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/616 (49%), Positives = 424/616 (68%), Gaps = 10/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V + D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHEDRSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVYRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++S + GT IRFWPD+ +F A F +T++ R+RELAFLN
Sbjct: 145 AFEAGEPVGDME-RVRDMESDEETGTEIRFWPDESIFE-ADDFSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALR---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I+LR +E +D E Y + GG+ E+V++LN + +H+ V+ F + I +
Sbjct: 203 GVRISLRDEREEAADAEGIIEETYEYEGGIREFVEYLNETRSAMHEEVIYFEDEAQNIQV 262
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L
Sbjct: 263 EVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLGDLDENLK 321
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT ++S++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E +PD ++I
Sbjct: 322 GEDIREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEENPDTAEAI 381
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K++ A KA AA++A +L R+KS L S+SLPGKLADC + P E+E+FI EGDSAGGS
Sbjct: 382 INKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPGEAELFIAEGDSAGGS 441
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY
Sbjct: 442 AKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDLEDVRYE 500
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + E
Sbjct: 501 KIIMATDADVDGAHIRTLLLTFFYRHMRPLLENGYVYATQPPLYRIRYRGDTYDAMTEQE 560
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + + +QRFKGLGEM P QLW+TT++PE R+LKQ+ IEDAA A+ +FS L
Sbjct: 561 RDEIIEEKCNGSPSQVQRFKGLGEMNPQQLWDTTMDPENRILKQITIEDAAAADKMFSVL 620
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I+ A
Sbjct: 621 MGDAVEPRKQFIKENA 636
>gi|383812021|ref|ZP_09967468.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
gi|383355407|gb|EID32944.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
Length = 657
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/634 (47%), Positives = 426/634 (67%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIE+ + DNS++V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEITINEDNSITVEDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVYRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V + GTR +FWPD +FTT + + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETQKTGTRQQFWPDPTIFTTTV-YQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + I I+
Sbjct: 204 GIKITLTDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL S SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKSYADNDPQISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +I+++V P+FEGQTKT+LGN EV V Q+V E L++YLE HP+
Sbjct: 323 EIAGEDFREGLTAVIAIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVENEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + + L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|237743164|ref|ZP_04573645.1| DNA gyrase subunit B [Fusobacterium sp. 7_1]
gi|289765530|ref|ZP_06524908.1| subunit B [Fusobacterium sp. D11]
gi|336401760|ref|ZP_08582518.1| DNA gyrase, B subunit [Fusobacterium sp. 21_1A]
gi|423137793|ref|ZP_17125436.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229433460|gb|EEO43672.1| DNA gyrase subunit B [Fusobacterium sp. 7_1]
gi|289717085|gb|EFD81097.1| subunit B [Fusobacterium sp. D11]
gi|336160471|gb|EGN63517.1| DNA gyrase, B subunit [Fusobacterium sp. 21_1A]
gi|371959262|gb|EHO76954.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 635
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 419/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVVDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTVHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ ++ GT +RF D ++F T + +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFETLV-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D +K + Y F GG+ +++ + D+ + + F + D + +D+
Sbjct: 198 GLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDETTIIEKPFFVSAEQDNVGVDVT 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 256 FTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IIS ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 315 IREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVVSNSLKIFLEDNPNITKIIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 435 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YR+ L G +Y+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 494 LMTDADVDGAHIRTLILTFLYRHMIDLIYGGNVYIACPPLYKVAAGKQIIYAYNDLELKN 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 554 ILGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 613
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 614 DKVEPRREFIEEHAEYVKNID 634
>gi|336420154|ref|ZP_08600396.1| DNA gyrase, B subunit [Fusobacterium sp. 11_3_2]
gi|336162116|gb|EGN65105.1| DNA gyrase, B subunit [Fusobacterium sp. 11_3_2]
Length = 635
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 419/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVVDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTVHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ ++ GT +RF D ++F T + +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFETLV-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D +K + Y F GG+ +++ + D+ + + F + D + +D+
Sbjct: 198 GLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDETTIIEKPFFVSAEQDNVGVDVT 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 256 FTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IIS ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 315 IREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVVSNSLKIFLEDNPNITKIIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 435 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YR+ L G +Y+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 494 LMTDADVDGAHIRTLILTFLYRHMIDLIYGGNVYIACPPLYKVAAGKQIIYAYNDLELKN 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 554 ILGQINQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 613
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 614 DKVEPRREFIEEHAEYVKNID 634
>gi|448302921|ref|ZP_21492871.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
gi|445593928|gb|ELY48095.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
Length = 640
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/613 (49%), Positives = 422/613 (68%), Gaps = 8/613 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSIHDDGSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLEVEVKRDGGVFEH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V +D + GT IRFWPD +F T F +T++ R+RELAFLN
Sbjct: 145 AFESGEPVGDME-RVRDMDPDEGTGTTIRFWPDIDIFETG-DFTFSTLSNRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I LR E ++ + Y + GG+ E+V++LN + +H DV+ F D I +++A
Sbjct: 203 GVRITLRDERAEDGPTEET-YEYEGGIREFVEYLNETRSAMHEDVIYFEDDDQNIEVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q ++ ++ +AN+I T +GG+H+ G K +LTRT+N ++ + D + +L GE
Sbjct: 262 MQ-ATEELQGSIHAFANNINTREGGSHLTGFKTALTRTVNDYAGENDLLGDLEENLKGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K
Sbjct: 321 IREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIITK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AA++A +L R+KS L S+SLPGKLADC + PE++E+FI EGDSAGGSAKQ
Sbjct: 381 AVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEKAELFIAEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII
Sbjct: 441 ARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY+V + +AE +
Sbjct: 500 MATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTEAERDE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LMG
Sbjct: 560 IIEQKCDGNPTRVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLMGD 619
Query: 600 RVDTRKELIQNAA 612
V+ RK+ I+ A
Sbjct: 620 AVEPRKQFIKEHA 632
>gi|190710549|gb|ACE95105.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/615 (50%), Positives = 421/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNA S LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNAPSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|448576111|ref|ZP_21642154.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
gi|445729791|gb|ELZ81385.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
Length = 639
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/615 (50%), Positives = 422/615 (68%), Gaps = 13/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY IEV L D SVSVADNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVTLHEDGSVSVADNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV + RDG +H
Sbjct: 87 YNRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTELEVEIMRDGAVWHH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G+PV V ++ + GT I FWPD ++F T F T+ R+RELAFLN
Sbjct: 145 RFEKGEPVQGAFEKVRDMEPDEETGTTITFWPDGEIFETT-DFTFKTLETRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I+L E S+ + + + F GG+ E+V++LN K LH DV+ + + +GI +++A
Sbjct: 204 GVEISLTDERSE----ESSTFMFEGGIREFVEYLNETKTALHEDVIYYEDETEGIAVEVA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
LQ +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 LQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSEGMLSDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + E L Y E +PD+ +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESTTHEKLGTYFEENPDMAKAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S++LPGKLADC S P +SE+F+VEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKKAEELTRRKSALESTALPGKLADCQSRDPSKSELFVVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILP++GKILNVE+ + +N E++ LI A+G G+ G++F + +RY +I
Sbjct: 439 QGRDREFQAILPIKGKILNVEKHRLDRILENNEVRALITAIGAGI-GDEFDIDDVRYQRI 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAEL 537
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V RG ++
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMTEEDRD 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ ++ N +QRFKGLGEM P QLWETT+NPE R+LK++ +EDAA A+ +FS LM
Sbjct: 558 RLIEEKCNGNPT-QVQRFKGLGEMNPDQLWETTMNPENRVLKRITVEDAAAADRMFSILM 616
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 617 GDAVEPRKQFIKDHA 631
>gi|402847272|ref|ZP_10895569.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266748|gb|EJU16165.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 655
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 414/627 (66%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY ++I+V + DNS+ V DNGRGIP+D+H
Sbjct: 36 MYIGDIGEKGLHHLVYEVVDNSIDEALAGYCNDIKVTIHEDNSIEVQDNGRGIPVDIHEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS L+ TV RDG Y Q
Sbjct: 96 EGKSALEVVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTLLKATVQRDGKIYTQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++SRG P T L + + D+ GT + F PD +FT+ ++ +A R+RELAFLN
Sbjct: 154 EFSRGVPTTELQT----IGTTDKTGTTVLFKPDDTIFTST-EYQFKILATRLRELAFLNA 208
Query: 181 KLTIALRKEDSDPEKNQ--YNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L E E Y+ GLEE+V++++ K+ L DV+ + GI ++
Sbjct: 209 GITLTLTDERQRDEAGVALTETYYSEKGLEEFVKYIDRSKEHLIEDVIHIITEKQGIPVE 268
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + LTRTL SK + + ++G
Sbjct: 269 VAMTYNT-SYNENVYSYVNNINTIEGGTHLAGFRRGLTRTLKKYATDSKLLDKVKVEITG 327
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT ++S++V P+FEGQTKT+LGN EV VD +V E L YLE HP I+
Sbjct: 328 DDFREGLTAVVSIKVAEPQFEGQTKTKLGNNEVMGAVDVAVSEALEIYLEEHPKEAKIIV 387
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS L LPGKLADCSS P SE+F+VEGDSAGG+A
Sbjct: 388 DKVILAATARQAARKAREMVQRKSPLSGGGLPGKLADCSSKDPILSELFLVEGDSAGGTA 447
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKEAL 473
KQGRDR FQAILPLRGKILNVE+ + + ++EEI+N+ ALG+ + E+ L
Sbjct: 448 KQGRDREFQAILPLRGKILNVEKAMQHKVLESEEIRNIYTALGVTIGTEEDSMALNLSKL 507
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY RGK+ +YC+
Sbjct: 508 RYHKVIIMTDADVDGSHIATLILTFFFRNMRSLIENGYVYIATPPLYLCTRGKEREYCWT 567
Query: 534 DAELKKV--KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + + + +QR+KGLGEM QLWETT+NPE R L+++ IE+AAEA+
Sbjct: 568 EQQRQAFIDRVGGGDENRVRVQRYKGLGEMNEEQLWETTMNPENRTLRKITIENAAEADA 627
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A +D
Sbjct: 628 IFSMLMGDDVAPRREFIEANATYARID 654
>gi|78185902|ref|YP_373945.1| DNA gyrase subunit B [Chlorobium luteolum DSM 273]
gi|78165804|gb|ABB22902.1| DNA gyrase subunit B [Chlorobium luteolum DSM 273]
Length = 644
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 307/624 (49%), Positives = 419/624 (67%), Gaps = 26/624 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHL+YEI+DN++DE GY I V+L D SV+V D+GRGIP+D+HP
Sbjct: 33 MYIGDIHSRGLHHLIYEIVDNSIDETLGGYNDYIFVSLNPDGSVTVIDHGRGIPVDIHPD 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T++ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG + Q
Sbjct: 93 KKKSALELVMTLIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAWFQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + + +GT+ F PD ++F +F + I R+RELAFLN
Sbjct: 151 RYHRGVP----EADVKEIGTTTERGTKTTFMPDSEIFKVT-EFRKDIIIDRMRELAFLNS 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGIT 235
L I ++ + + E + F GGL+E+V + LN K+P++ + G + DG
Sbjct: 206 NLKIVVQDIEGEQET-----FHFEGGLKEFVLFTDENRLNLIKEPIY-IYG---EKDGTI 256
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++AL++ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ ++L
Sbjct: 257 VEIALEY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLAL 315
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ + E L E+ E +P+V+
Sbjct: 316 TGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESVLNEQLAEFAESNPNVIKM 375
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGG
Sbjct: 376 IIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGG 435
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY
Sbjct: 436 SAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTNFGEEEFSAEKLRY 495
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KIII+TDADVDGAHIRTLLLTFF+R+ ++L + G +Y+ PPLY V+ GK+ QY +DD
Sbjct: 496 GKIIIMTDADVDGAHIRTLLLTFFFRHMRSLIEAGKVYIAQPPLYLVKSGKEQQYAWDDD 555
Query: 536 ELKKVKSSFPS----NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
E + S A IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+
Sbjct: 556 ERNSISDSMKKMQKGKANVHIQRYKGLGEMNPEQLWGTTMDPEHRSLLQVSVENAMEADK 615
Query: 592 VFSSLMGARVDTRKELIQNAANLV 615
VFS+LMG +V+ R+E I+ A V
Sbjct: 616 VFSTLMGDKVEPRREFIEKNARYV 639
>gi|15672887|ref|NP_267061.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|385830443|ref|YP_005868256.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|418038398|ref|ZP_12676730.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723837|gb|AAK05003.1|AE006324_6 DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|326406451|gb|ADZ63522.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|354693409|gb|EHE93178.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672965|dbj|BAL50856.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis IO-1]
Length = 651
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 434/625 (69%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+VTV +DG +Y+Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTVLDVTVHKDGQKYYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L + DR+GT + F PD ++FT ++FD + +A R+RELAFLN
Sbjct: 153 EYHRGLVGDDLKI----IGETDRRGTTVHFVPDPEIFTETVEFDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I+L + EKN+ + + + GG++ YV++LN +K + + F + ++DGI +++A
Sbjct: 209 GLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNENKTVIFEPAIFTEGEMDGIAVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH +G + +LTR +N+ K++K +K+ + +L+G+
Sbjct: 268 MQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALTRVINNYAKQNKILKENEDNLTGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++ E LT ++ +P V I+ K
Sbjct: 327 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFAEALTTFMLENPQVARKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS PE++E+FIVEGDSAGGSAK
Sbjct: 387 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNNPEQTELFIVEGDSAGGSAKS 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G D+ RYHK++
Sbjct: 447 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGF-GADYDLSKARYHKLV 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PP+Y ++ G + + E
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSETKEYIQPGENQE 565
Query: 537 --LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
L++ + + ++QR+KGLGEM QLW+TT++PE R++ ++ +EDAAEA+ +F
Sbjct: 566 KDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWDTTMDPEHRLMARVSVEDAAEADKIF 625
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+N A +D
Sbjct: 626 DMLMGDRVEPRREFIENNAQYSTID 650
>gi|422932975|ref|ZP_16965900.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339891873|gb|EGQ80794.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 639
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 419/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVVDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++Q
Sbjct: 87 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTVHYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ ++ GT +RF D ++F T + +++ T++ R++ELA+LN
Sbjct: 145 KYHRGKPEEDV--KVIGTCDENEHGTTVRFKADGEIFETLV-YNYFTLSNRLKELAYLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D +K + Y F GG+ +++ + D+ + + F + D + +D+
Sbjct: 202 GLTIILSDLRKDEKKEEI--YKFDGGILDFLNEIVKDETTIIEKPFFVSAEQDNVGVDVT 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 260 FTYTT-SQNEVIYSFVNDINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ IIS ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 319 IREGVVGIISTKIPQPQFEGQTKGKLGNSEVSGIVNTVVSNSLKIFLEDNPNITKIIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 379 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 439 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YR+ L G +Y+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 498 LMTDADVDGAHIRTLILTFLYRHMIDLIYGGNVYIACPPLYKVAAGKQIIYAYNDLELKN 557
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 558 ILGQMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 617
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 618 DKVEPRREFIEEHAEYVKNID 638
>gi|253573849|ref|ZP_04851191.1| DNA gyrase, B subunit [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846326|gb|EES74332.1| DNA gyrase, B subunit [Paenibacillus sp. oral taxon 786 str. D14]
Length = 636
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/623 (51%), Positives = 428/623 (68%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+E++DN++DEA AGYA+ I+V + DNSV+V DNGRGIP+ ++
Sbjct: 28 MYIGSTSVRGLHHLVWEVVDNSIDEALAGYANKIDVTVHPDNSVTVEDNGRGIPVGMNEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE V+TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q
Sbjct: 88 LQKSTLEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSTKVIVEVKRDGHIYQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + GT+ F+PD ++FT FD+NT+ RIRELAFLN
Sbjct: 146 EYHRGTP----QYDVRVIGDTTETGTKTTFYPDPEIFTETTVFDYNTLLTRIRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I+L +D Q + + GG+ EYV++LN +++ LH+ V G R D I +
Sbjct: 202 GINISL----TDERTGQSESFHYEGGIMEYVRFLNQNREVLHEEPIYVEGQR---DMIQV 254
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQ+ +D Y++ + +AN+I T +GGTH G K++LTR +N +K+ +K+ D +L+
Sbjct: 255 EISLQY-NDGYTENIYSFANNIHTHEGGTHESGFKSALTRIINDYARKTGMIKENDSNLT 313
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGLT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P V I
Sbjct: 314 GDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFMDENPSVSRRI 373
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
L KSL A +A AA++AR+L R+KS L S+LPGKLADCSS SE++IVEGDSAGGS
Sbjct: 374 LEKSLQASRAREAARKARELTRRKSALEVSALPGKLADCSSKDASISELYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYH
Sbjct: 434 AKQGRDRHFQAILPLRGKILNVEKARLDRILGNAEIRAIITALGTGI-GEDFDISKARYH 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFF+RY + + + G +Y+ PPL+K+ER K V+Y + E
Sbjct: 493 KIIIMTDADVDGAHIRTLLLTFFFRYMRKIIEAGYVYIAQPPLFKIERNKVVRYANSEKE 552
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + F A ++QR+KGLGEM QLWETT++PE R+++Q+ I DA +A+ +F +L
Sbjct: 553 RDQIIAEFGEGAKVNVQRYKGLGEMNAEQLWETTMDPESRVMQQVSISDAIQADAIFDTL 612
Query: 597 MGARVDTRKELIQNAANLV-NLD 618
MG V+ R+E I A V NLD
Sbjct: 613 MGDNVEPRREFIHEHAKYVKNLD 635
>gi|374597859|ref|ZP_09670861.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|423323806|ref|ZP_17301648.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
gi|373909329|gb|EHQ41178.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|404609024|gb|EKB08449.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
Length = 646
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 296/625 (47%), Positives = 422/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + DNS++V DNGRGIP+D+H
Sbjct: 30 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTINVVINEDNSITVEDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+RDG Y Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLRATVYRDGKIYEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YS+GK + + + D++GT + F PD +FT +++ ++T+A R+RELAFLN
Sbjct: 148 EYSKGKALFPVKV----IGETDKRGTTVMFKPDPTIFTQTLEYSYDTLASRLRELAFLNK 203
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
LTI L + D + Q +E FF+ GL+E++++L+ ++ P+ ++V+ D + ++
Sbjct: 204 GLTITLTDAREVDEKGQQKSEVFFSKEGLKEFIKFLDGNRTPIINEVIWMESDKGDVPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + +D YS+ + Y N+I T +GGTH++G + LTRTL S + +SG
Sbjct: 264 VALVY-NDTYSENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGLLDKLKFEISG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ I+
Sbjct: 323 DDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEENPNDAKIIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AAK+AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+A
Sbjct: 383 QKVILAAQARHAAKKAREMVQRKTVMTGGGLPGKLSDCSEQDPTKCEVFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ ++++EEI+N+ ALG+ + E+ K E L
Sbjct: 443 KQGRDRNFQAILPLRGKILNVEKAMGHKVFESEEIKNIFTALGVTIGTEEDSKALNLEKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY + L + G +++ PPLY V++G++ Y +
Sbjct: 503 RYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIENGHVFIATPPLYMVKKGQRKVYAWS 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E + + + S+QR+KGLGEM QLWETT+NPE R+L+Q+ I+D EA++VF
Sbjct: 563 DEERIDLMEEMGNGS--SVQRYKGLGEMNAEQLWETTMNPEHRILRQVRIDDLKEADLVF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R++ I+ A +D
Sbjct: 621 SMLMGDEVPPRRDFIEKNATYAKID 645
>gi|359688817|ref|ZP_09258818.1| DNA gyrase subunit B [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418749228|ref|ZP_13305520.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
gi|418757357|ref|ZP_13313545.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384117028|gb|EIE03285.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404276297|gb|EJZ43611.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 300/621 (48%), Positives = 421/621 (67%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ ++I +++L DN + V DNGRGIP+ +HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTDITISILPDNIIEVKDNGRGIPVAIHPE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSESLEV V+++G + Q
Sbjct: 88 KNISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSESLEVEVYQNGKIHQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYSRG P+ + + +GT +RF PD +FTT +F + + R RELAFLN
Sbjct: 146 KYSRGIPLGPVNV----IGDTTERGTVVRFKPDATIFTTT-EFHFDVLTSRFRELAFLNK 200
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLA 239
L + ++ K D EK+ E+ F GG+ +V++LN +K PLH + F ++ D + ++A
Sbjct: 201 GLKLIVQDKRKPDSEKH---EFLFDGGIVSFVEYLNENKHPLHKTIHFERNKDDVVAEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKT-VKDKDISLSGE 298
+Q+ SD YS+ + + N+I GGTH+EG +A+LTRTLN KK + VK + +LSGE
Sbjct: 258 IQY-SDTYSENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDQQLVKKQPTALSGE 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
++EG+T +ISV++P P+F QTK +L N E++ ++ E L+ + E +P + IL
Sbjct: 317 DLKEGITAVISVKIPQPQFNSQTKEKLVNAEIKGIMQTLTGEGLSLFFEENPAITKKILE 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + + KA AA++ARDL R+KSVL LPGKLADCS P SE++IVEGDSAGGSAK
Sbjct: 377 KCILSAKAREAARKARDLTRRKSVLEGGGLPGKLADCSEKDPAASELYIVEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR +QAILPL+GKILNVE+ + NEEI+ L+ ALG G+ ++F + RYHKI
Sbjct: 437 QGRDRHYQAILPLKGKILNVEKARLDKILGNEEIRTLVSALGTGIGEDEFNVDKARYHKI 496
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I+TDAD+DG+HIRTLLLTFF+RY K + ++G +YV PPLY ++ GK Y + D E
Sbjct: 497 FIMTDADIDGSHIRTLLLTFFFRYMKPIIEKGFLYVAQPPLYLIKHGKTSTYLFSDKEKD 556
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ S + IQR+KGLGEM P QLWETT++PE+R++ ++ ++D EA F+ LMG
Sbjct: 557 EYLKSLGTEKAV-IQRYKGLGEMNPEQLWETTMDPEKRVVLKVKLDDYVEAEDTFNILMG 615
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
V+ R+ I+ NAA + NLD
Sbjct: 616 DEVNPRRRFIEVNAAKVANLD 636
>gi|118587497|ref|ZP_01544922.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
gi|71466856|emb|CAH41002.1| DNA gyrase subunit B [Oenococcus oeni]
gi|118432147|gb|EAV38888.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
Length = 652
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 300/618 (48%), Positives = 414/618 (66%), Gaps = 11/618 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN +DEA AG+A ++ + + DNS+++ D+GRG+P+++ P
Sbjct: 38 MYIGSTASSGLHHLVWEIIDNGIDEALAGFAHHVTLTIEKDNSITITDDGRGVPVEIQPK 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E V T+LHAGGKF S Y VSGGLHGVG SVVNALS+ ++V V+RD Y+
Sbjct: 98 TGRPAMEAVFTILHAGGKF--DSKSYKVSGGLHGVGASVVNALSKEMDVRVYRDNKIYYM 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG T + P+ K +GT + F PD +F I FD+ T+A RIRELAFLN
Sbjct: 156 DFERGHIKTEMKLLDEPMRLK--RGTIVHFAPDPDIFRETIVFDYRTLASRIRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L +++ + DP KN+ + + GG+ EYV++LN +K+PL + V + +GI +++A
Sbjct: 214 GLRLSITDKRVDPVKNE--SFMYEGGIAEYVKFLNKNKQPLFPEPVYVEGEENGIQVEVA 271
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +DA ++T++ + N+I T +GGTH G K +LTR +N KK +KD D LSGE
Sbjct: 272 LQY-TDAVAETLMSFTNNIHTHEGGTHETGFKMALTRIINDYVKKKGILKDSDDPLSGED 330
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T I+S++ P+P+FEGQTKT+LGN + ++ V+ ++ +P+ +I +K
Sbjct: 331 VREGITAIVSIKHPDPQFEGQTKTKLGNTDAQQAVNHQFSTIFNRFMMENPETARAIANK 390
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA +AAK+ARDL R+KS L S+L GKLAD +S PE SE+FIVEGDSAGGSAKQ
Sbjct: 391 GLIASKARVAAKKARDLTRKKSGLEISALAGKLADNTSRDPEISELFIVEGDSAGGSAKQ 450
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R QAILP+RGKILNVE+ + NEEI++L A+G G GE+F YHK+I
Sbjct: 451 GRSRLTQAILPIRGKILNVEKATLDKVLANEEIRSLFTAMGTGF-GEEFDISKAHYHKVI 509
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY--DDAEL 537
I+TDADVDGAHIRTLLLT F+RY + L D G IY+ PPLY V G Q Y D EL
Sbjct: 510 IMTDADVDGAHIRTLLLTLFFRYMRPLIDAGYIYIAQPPLYGVAIGNSDQRVYLDSDEEL 569
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ ++ P++ IQR+KGLGEM VQLW+TT++P+ R L ++ E E + F LM
Sbjct: 570 DQYTATLPASPKPRIQRYKGLGEMDAVQLWDTTMDPKHRRLLRVDPEYQPEVDTTFDMLM 629
Query: 598 GARVDTRKELIQNAANLV 615
G RV+ R+E I++ A V
Sbjct: 630 GDRVEPRREFIEDNAQFV 647
>gi|78188013|ref|YP_378351.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
gi|78170212|gb|ABB27308.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
Length = 637
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 418/624 (66%), Gaps = 26/624 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYEI+DN++DE G+ I VAL AD S++V D+GRGIP+D+HP
Sbjct: 26 MYIGDIHSRGLHHLVYEIVDNSIDETLGGFNDYIFVALNADGSITVIDHGRGIPVDMHPE 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG Y+Q
Sbjct: 86 KQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAYYQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P V + D++GT+ F PD +F T +F I R+RELAFLN
Sbjct: 144 RYERGVP----QGDVKVIGDSDQRGTKTTFMPDGTIFKTT-EFRKEIIIDRMRELAFLNK 198
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGIT 235
L I ++ + + E E+ F GG+ E+V++ LN ++P++ + G R DG
Sbjct: 199 NLRIIVQDTNGEQE-----EFHFEGGICEFVRFTDQNRLNLLREPIY-LYGER---DGTV 249
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLNS +K+ +K+ ++L
Sbjct: 250 VEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNSYAQKNDLLKNLKLTL 308
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V + L E+ E +P+ L
Sbjct: 309 TGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVETVVNDQLAEFAESNPNTLKL 368
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGG
Sbjct: 369 IIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGG 428
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY
Sbjct: 429 SAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGDEEFAVEKLRY 488
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KIII+TDADVDGAHIRTLLLTFF+R+ + + + G +Y+ PPLY V+ GK Y +DD
Sbjct: 489 GKIIIMTDADVDGAHIRTLLLTFFFRHMRPVIEAGRVYIAQPPLYLVKSGKDQHYAWDDD 548
Query: 536 E----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
E + +K S A IQR+KGLGEM P QLW TT++P R L + +E+A EA+
Sbjct: 549 ERNSIVDNMKKMQKSKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLLVSVENAMEADQ 608
Query: 592 VFSSLMGARVDTRKELIQNAANLV 615
VFS+LMG +V+ R+E I+ A V
Sbjct: 609 VFSTLMGDKVEPRREFIEKNARYV 632
>gi|296328806|ref|ZP_06871320.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154141|gb|EFG94945.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 639
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 420/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L +N + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPENIIEVMDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSA+E VLT+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G+ ++Q
Sbjct: 87 YGKSAMEIVLTILHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGVVHYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ + GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 145 KYHRGKPEENV--KVIGSCDESEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLA 239
LTI L D E+ + Y F GG+ +++ + + D + + D + +D+
Sbjct: 202 GLTIIL--SDLRKEEKKEETYKFDGGILDFLNEIVKEDTTIIEKPFYVSSEQDNVGVDVT 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 260 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 319 IREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSSLKIFLEDNPNITKIIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 379 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 439 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDIAKLRYGKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 498 LMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKN 557
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 558 ILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 617
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 618 DKVEPRREFIEEHAEYVKNID 638
>gi|373110591|ref|ZP_09524857.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 10230]
gi|423130304|ref|ZP_17117979.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 12901]
gi|423133984|ref|ZP_17121631.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 101113]
gi|371642325|gb|EHO07893.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 10230]
gi|371645840|gb|EHO11361.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 12901]
gi|371647755|gb|EHO13251.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 101113]
Length = 646
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/629 (47%), Positives = 421/629 (66%), Gaps = 24/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AGY I V + DNS++V DNGRGIP+D+H
Sbjct: 30 MYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTISVTINEDNSITVEDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G Y Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLRATVYREGKIYEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRGK + + + D++GT + F PD +FT ++F ++T+AGR+REL+FLN
Sbjct: 148 EYSRGKALFPVKV----IGETDKRGTSVTFKPDHTIFTQTLEFSYDTLAGRLRELSFLNK 203
Query: 181 KLTIALR-----KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDG 233
L I L +E+ +P+ +E FF+ GL+E++++L+ + P+ DV+ D
Sbjct: 204 GLKITLTDKRVIEENGEPK----HEVFFSKEGLKEFIKFLDGSRVPIIEDVISMELDKGE 259
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
I +++AL + +D Y++ + Y N+I T +GGTH++G + LTRTL S +
Sbjct: 260 IPVEVALVY-NDTYAENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGMLDKLKF 318
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++G+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+
Sbjct: 319 EITGDDFREGLTAIVSVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEEHPNDA 378
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS + E+F+VEGDSA
Sbjct: 379 KIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKLSDCSEQDASKCEVFLVEGDSA 438
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK--- 470
GG+AKQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K
Sbjct: 439 GGTAKQGRDRNFQAILPLRGKILNVEKAMGHKVFENEEIKNIFTALGVTMGTEEDSKALN 498
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G++ +
Sbjct: 499 LEKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIENGYVYIATPPLYMVKKGQRKE 558
Query: 530 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y + D E ++ S + S+QR+KGLGEM QLW+TT+NPE R+L+Q+ I+ EA
Sbjct: 559 YAWTDEERLELMEKMGSGS--SVQRYKGLGEMNAEQLWDTTMNPEHRILRQVTIDSLQEA 616
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS LMG V R++ I+ A +D
Sbjct: 617 DRVFSMLMGDEVPPRRDFIEKNATYAKID 645
>gi|294781815|ref|ZP_06747148.1| DNA gyrase, B subunit [Fusobacterium sp. 1_1_41FAA]
gi|294481925|gb|EFG29693.1| DNA gyrase, B subunit [Fusobacterium sp. 1_1_41FAA]
Length = 639
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/621 (48%), Positives = 423/621 (68%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L DN + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKILPDNIIEVVDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G Y+Q
Sbjct: 87 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKEGNVYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ + GT +RF D +F T + +++ T++ R++ELA+LN
Sbjct: 145 KYHRGKPEEDV--KIIGSCEANEHGTTVRFKADGDIFETLV-YNYFTLSNRLKELAYLNR 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D E+ + Y F GG+ +++ + ++ + D + + D + +D+
Sbjct: 202 GLTITL--SDLRKEEKKEETYKFNGGILDFLNEIVKEEATIIDKPFYVSAEQDNVGVDVT 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++T+ + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 260 FTYTT-SQNETIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P + ++ K
Sbjct: 319 IREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNSIVSSSLKIFLEDNPAITKIVVEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEG+SAGGSAKQ
Sbjct: 379 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGNSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + G+ F LRY KII
Sbjct: 439 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GDTFDISKLRYGKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY + L +EG IY+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 498 LMTDADVDGAHIRTLILTFLYRYMRELINEGNIYIACPPLYKVSSGKQIIYAYNDLELKN 557
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V + N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ +++A EA+++F LMG
Sbjct: 558 VLAQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSVDNAREADMLFDKLMG 617
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 618 DKVEPRREFIEEHAEYVKNID 638
>gi|163786113|ref|ZP_02180561.1| DNA gyrase subunit B [Flavobacteriales bacterium ALC-1]
gi|159877973|gb|EDP72029.1| DNA gyrase subunit B [Flavobacteriales bacterium ALC-1]
Length = 649
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/631 (47%), Positives = 418/631 (66%), Gaps = 28/631 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ NI V + DNS++ D+GRGIP+ LH
Sbjct: 33 MYIGDVGTRGLHHLVYEVVDNSIDEALAGHCDNITVTINEDNSITTEDDGRGIPVGLHKK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALSE L+ TV+R+G Y Q
Sbjct: 93 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLKATVFREGKVYEQ 150
Query: 121 KYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+Y RGK PV T D++GT + F PD +FT ++++++T+A R+RELA+
Sbjct: 151 EYERGKAMYPVKT-------TGDTDKRGTTVTFKPDSTIFTQTLEYNYDTLASRLRELAY 203
Query: 178 LNPKLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDV 231
LN +T+ L KED E ++ GL+E++++L+ + PL DV+ F +
Sbjct: 204 LNKGITVHLIDKRHTKEDGSFEGETFHS---KEGLKEFIKFLDATRDPLMKDVIAFEGEK 260
Query: 232 DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK 291
+G+ +++A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL S +
Sbjct: 261 NGVPVEVAMIYNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKFADSSGMLDKL 319
Query: 292 DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 351
++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE HPD
Sbjct: 320 KFDVAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSASVSQAVSEMLTDYLEEHPD 379
Query: 352 VLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
+I+ K + A +A AA++AR++V++K+V+ LPGKL+DCS PE EI++VEGD
Sbjct: 380 DAKTIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQNPEICEIYLVEGD 439
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK- 470
SAGG+AK GRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K
Sbjct: 440 SAGGTAKMGRDRAFQAILPLRGKILNVEKAMTHKVFENEEIKNIFTALGVTIGTEEDSKA 499
Query: 471 ---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
LRYHKI+I+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY V++G +
Sbjct: 500 LNLSKLRYHKIVIMCDADIDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLVKKGAK 559
Query: 528 VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 587
Y ++D E + + A IQR+KGLGEM +QLW+TT+NPE R L+Q+ I++
Sbjct: 560 KAYAWNDDERMALMDQYGDGA--KIQRYKGLGEMNAIQLWDTTMNPEFRTLRQIQIDNGV 617
Query: 588 EANVVFSSLMGARVDTRKELIQNAANLVNLD 618
EA+ VFS LMG V R+E I+ A N+D
Sbjct: 618 EADRVFSMLMGDEVPPRREFIEKNAVYANID 648
>gi|254302374|ref|ZP_04969732.1| DNA topoisomerase (ATP-hydrolyzing) [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322566|gb|EDK87816.1| DNA topoisomerase (ATP-hydrolyzing) [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 635
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 418/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L DN + V DNGRGIP D+HP
Sbjct: 23 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPDNIIEVVDNGRGIPTDIHPK 82
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G+ ++Q
Sbjct: 83 YGKSALEIVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKAGVIHYQ 140
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ ++ GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 141 KYHRGKPEEDV--KIIGSCDENEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLA 239
LTI L D +K + Y F GG+ +++ + + D + + D + +D+
Sbjct: 198 GLTITLSDLRKDEKKEE--TYKFDGGILDFLNEIVKEDTTIIEKPFYISSEQDNVGVDVT 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 256 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 315 IREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKIIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 375 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 435 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 494 LMTDADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVSSGKQIVYAYNDLELKN 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 554 VLGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 613
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 614 DKVEPRREFIEEHAEYVKNID 634
>gi|149182285|ref|ZP_01860764.1| DNA gyrase subunit B [Bacillus sp. SG-1]
gi|148849977|gb|EDL64148.1| DNA gyrase subunit B [Bacillus sp. SG-1]
Length = 638
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 428/620 (69%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY S I+V++ DNS++V DNGRGIP+ +H
Sbjct: 29 MYIGSTSSKGLHHLVWEIVDNSIDEALAGYCSEIKVSIEKDNSITVQDNGRGIPVGIHEK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q
Sbjct: 89 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ +G P L D GT I F PD ++FT +++++ +A R+RELAFLN
Sbjct: 147 KFEKGVPSGDLKV----TGESDVTGTIIHFKPDPEIFTETTEYEYDILANRLRELAFLNR 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I + ED+ E ++ NEY + GG++ YV+ LN K+ +H+ + + D I++++A
Sbjct: 203 GIKIII--EDNRVE-DKKNEYHYEGGIKSYVEHLNRSKEVVHEEPIYIEGEKDNISVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D ++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +LSGE
Sbjct: 260 LQY-NDGFASNLYSFANNIHTYEGGTHESGFKTALTRVINDYARKNHLYKESDANLSGED 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IIS++ P+P+FEGQTKT+LGN E R + D E+ +L +P V ++ K
Sbjct: 319 VREGITAIISIKHPDPQFEGQTKTKLGNSEARTITDALFSEHFESFLLENPVVARKVVDK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAK+AR+L R+KS L SSLPGKLADCSS P+ SEI+IVEGDSAGGSAKQ
Sbjct: 379 GLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSRDPKISEIYIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RY K++
Sbjct: 439 GRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAMITALGTGI-GEDFDISKARYQKVV 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPLY++++GK+++Y Y D +L++
Sbjct: 498 IMTDADVDGAHIRTLLLTFFYRYMRQIIEAGYIYIAQPPLYQIKQGKKIEYVYSDKQLEE 557
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P+ IQR+KGLGEM QLWETT++PE R L Q+ +EDA EA+ F LMG
Sbjct: 558 ALAQMPAQPKPGIQRYKGLGEMNATQLWETTMDPEYRTLLQVSLEDAIEADETFEMLMGD 617
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V+ R+ I+ NAA + NLD
Sbjct: 618 KVEPRRNFIEDNAAYVKNLD 637
>gi|372211058|ref|ZP_09498860.1| DNA gyrase subunit B [Flavobacteriaceae bacterium S85]
Length = 645
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/628 (47%), Positives = 420/628 (66%), Gaps = 22/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + +NS++V DNGRGIP+ +H
Sbjct: 29 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTISVFINENNSITVQDNGRGIPVGIHKK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ ++ TV R+G + Q
Sbjct: 89 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHVKATVHREGKIWEQ 146
Query: 121 KYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+Y RGK PV T V ++ GT + F PDK +F ++++ T+A R+RELA+
Sbjct: 147 EYERGKALYPVKT-------VGDSNKTGTEVTFIPDKSIFQQTTEYNYETLANRMRELAY 199
Query: 178 LNPKLTIALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
LN +T+ L K D E N +E F + GL E+V++L+ ++ L DV+ + +GI
Sbjct: 200 LNKGITVTLTDKRHKDDEGNFISETFHSEDGLAEFVKYLDGTREQLTADVISMEGEKNGI 259
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL S +
Sbjct: 260 PVEVAMVYNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGMLSKLKFD 318
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
+SG+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE HPD
Sbjct: 319 VSGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVSAAVSQAVSEMLTDYLEEHPDDAK 378
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K + A +A AA +AR++V++K+V+ LPGKL+DCS T PE+ EIF+VEGDSAG
Sbjct: 379 TIVQKVILAAQARHAATKAREMVQRKTVMSIGGLPGKLSDCSETDPEKCEIFLVEGDSAG 438
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK---- 470
G+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K
Sbjct: 439 GTAKQGRDREFQAILPLRGKILNVEKAMQHKVFENEEIKNMFTALGVTIGTEEDSKALNL 498
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
LRYHK++I+ DADVDG+HI TL+LTFF+RY + + ++G +Y+ PPLY V++G + +Y
Sbjct: 499 SKLRYHKVVIMCDADVDGSHIATLILTFFFRYMREMVEQGYVYIATPPLYLVKKGNKKEY 558
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+DD + + F +A SIQR+KGLGEM QLW+TT+NPE R L+Q+ I+ EA+
Sbjct: 559 AWDDNQRDMINMKFGGSA--SIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVSIDSDVEAD 616
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
VFS LMG V R+E I+ A N+D
Sbjct: 617 RVFSMLMGDEVPPRREFIEKNAKYANID 644
>gi|281421058|ref|ZP_06252057.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
gi|281404976|gb|EFB35656.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
Length = 656
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 305/634 (48%), Positives = 425/634 (67%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLV E +DN++DEA AGY ++IEV + DNS++V DNGRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTINEDNSITVEDNGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFRGGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V +++GTR +FWPD +FT + + + IA R+RELAFLN
Sbjct: 149 EYEKGKPLYPVKV----VGETNKRGTRQQFWPDPTIFTHTV-YKWDIIANRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I LR D E + F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIKITLRDLRPDEEGKTKEQVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEI 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRTL + + SK ++ +
Sbjct: 264 AVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRTLKAYAEADPTISKQIEKAKVE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++ E REGLT +IS++V P+FEGQTKT+LGN EV+ V Q+V E L++YLE HPD
Sbjct: 323 IAPEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVQGAVQQAVNEALSDYLEEHPDEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+ + LPGKLADCS P+E EIF+VEGDSAG
Sbjct: 383 RICEKVVLAATARIAARKARESVQRKNFMTGGGLPGKLADCSMKDPKECEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED K+
Sbjct: 443 GSAKQGRDRFRQAILPLRGKILNVEKVQWHKVFEAESVMNIIQSIGVRFGVDGEDSKEAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK R K
Sbjct: 503 TDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCTYRSKVS 562
Query: 529 QYCYDD----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + A + K +++ QR+KGLGEM P QLWETT++P R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQAFIDKYGDGVEDKNIHT-QRYKGLGEMNPEQLWETTMDPSTRLLKQVTIE 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 NAAQADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|373460688|ref|ZP_09552439.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
gi|371955306|gb|EHO73110.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
Length = 656
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 305/634 (48%), Positives = 424/634 (66%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY +++ V L D SV+V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVAVTLNEDGSVTVEDNGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + + D++GTR +FWPD +FTT F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----IGETDKRGTRQQFWPDPAIFTTTT-FKWDIVASRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADAEPTIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++KSV+ LPGKLADCS+ P+E EIF+VEGDSAG
Sbjct: 383 KICEKVVLAATARIAARKARESVQRKSVMSGGGLPGKLADCSNKDPKECEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCSYKKVSE 562
Query: 530 YCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
YCY + + K V+ AL++ QR+KGLGEM P QLWETT++P R+LKQ+ I+
Sbjct: 563 YCYTEQQRQAFIDKYVEGKEDDKALHT-QRYKGLGEMNPEQLWETTMDPSSRLLKQVTIQ 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 NAAEADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|448688768|ref|ZP_21694505.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
gi|445778638|gb|EMA29580.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
Length = 642
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/614 (49%), Positives = 420/614 (68%), Gaps = 15/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AG+ NI+V + D SVSV+D+GRGIP+D H
Sbjct: 28 MYIGSTDARGLHHLVYEVVDNAIDEALAGHCDNIDVTIHDDGSVSVSDDGRGIPVDTHEE 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E V+T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 88 HGRPAVEVVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ GKP L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN
Sbjct: 146 RFDHGKPEYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GIT 235
+ I++ D + + + GG+ E+V++LN K PLH D++ F + + +
Sbjct: 204 GVAISIH----DERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQ 259
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+Q D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L
Sbjct: 260 VEIAMQGTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTL 318
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G+ +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++
Sbjct: 319 KGDDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEA 378
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K++ A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGG
Sbjct: 379 IVGKAVEAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGG 438
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGR+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY
Sbjct: 439 SAKQGRNPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRY 497
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KII++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DA
Sbjct: 498 EKIILMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDA 557
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E ++ +QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+
Sbjct: 558 ERDRIIEEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNI 617
Query: 596 LMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 618 LMGDAVEPRKEFIK 631
>gi|21904202|gb|AAM79083.1| putative DNA gyrase, subunit B [Streptococcus pyogenes MGAS315]
Length = 620
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/625 (48%), Positives = 433/625 (69%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + ADNS++V D+GRGIP+D+
Sbjct: 5 MYIGSTAKEGLHHLVWEIVDNSIDEALAGFASHIKVFIEADNSITVVDDGRGIPVDIQVK 64
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG SVVNALS L+V V+++G ++Q
Sbjct: 65 TGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGSSVVNALSTQLDVRVYKNGQIHYQ 122
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V L + + D GT + F PD ++FT QFD++ +A RI+ELAFLN
Sbjct: 123 EFKRGAVVADLEV----IGTTDVTGTTVHFTPDPEIFTETTQFDYSVLAKRIQELAFLNR 178
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ + S E+ ++ + + GG+ YV++LN K + + + +++GI +++A
Sbjct: 179 GLKISITDKRSGMEQEEH--FHYEGGIGSYVEFLNDKKDVIFETPIYTDGELEGIAVEVA 236
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +Y +T++ +AN+I T +GGTH +G +A+LTR +N KK+K +K+ + +L+GE
Sbjct: 237 MQYTT-SYQETVMSFANNIHTHEGGTHEQGFRAALTRVINDYAKKNKILKENEDNLTGED 295
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +L +P V I+ K
Sbjct: 296 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFQRFLLENPQVARKIVEK 355
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS ++E+FIVEGDSAGGSAK
Sbjct: 356 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDANQNELFIVEGDSAGGSAKS 415
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 416 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 474
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCY----DD 534
I+TDADVDGAHIRTLLLT YR+ + + + G +Y+ PP+Y V+ G ++ +Y +
Sbjct: 475 IMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVGSEIKEYIQPGIDQE 534
Query: 535 AELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+LK + + ++QR+KGLGEM QLWETT++PE R++ ++ ++DAAEA+ VF
Sbjct: 535 DQLKTALEKYSIGRSKPTVQRYKGLGEMDDHQLWETTMDPENRLMARVTVDDAAEADKVF 594
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R++ I+ A LD
Sbjct: 595 DMLMGDRVEPRRDFIEENAVYSTLD 619
>gi|28896290|ref|NP_802640.1| DNA gyrase subunit B [Streptococcus pyogenes SSI-1]
gi|161485752|ref|NP_664280.2| DNA gyrase subunit B [Streptococcus pyogenes MGAS315]
gi|342164970|sp|P0DG04.1|GYRB_STRP3 RecName: Full=DNA gyrase subunit B
gi|342164971|sp|P0DG05.1|GYRB_STRPQ RecName: Full=DNA gyrase subunit B
gi|28811541|dbj|BAC64473.1| putative DNA gyrase B subunit [Streptococcus pyogenes SSI-1]
Length = 650
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/625 (48%), Positives = 433/625 (69%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + ADNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTAKEGLHHLVWEIVDNSIDEALAGFASHIKVFIEADNSITVVDDGRGIPVDIQVK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S Y VSGGLHGVG SVVNALS L+V V+++G ++Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGS--YKVSGGLHGVGSSVVNALSTQLDVRVYKNGQIHYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V L + + D GT + F PD ++FT QFD++ +A RI+ELAFLN
Sbjct: 153 EFKRGAVVADLEV----IGTTDVTGTTVHFTPDPEIFTETTQFDYSVLAKRIQELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ + S E+ ++ + + GG+ YV++LN K + + + +++GI +++A
Sbjct: 209 GLKISITDKRSGMEQEEH--FHYEGGIGSYVEFLNDKKDVIFETPIYTDGELEGIAVEVA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +Y +T++ +AN+I T +GGTH +G +A+LTR +N KK+K +K+ + +L+GE
Sbjct: 267 MQYTT-SYQETVMSFANNIHTHEGGTHEQGFRAALTRVINDYAKKNKILKENEDNLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +L +P V I+ K
Sbjct: 326 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFQRFLLENPQVARKIVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS ++E+FIVEGDSAGGSAK
Sbjct: 386 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDANQNELFIVEGDSAGGSAKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 446 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCY----DD 534
I+TDADVDGAHIRTLLLT YR+ + + + G +Y+ PP+Y V+ G ++ +Y +
Sbjct: 505 IMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVGSEIKEYIQPGIDQE 564
Query: 535 AELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+LK + + ++QR+KGLGEM QLWETT++PE R++ ++ ++DAAEA+ VF
Sbjct: 565 DQLKTALEKYSIGRSKPTVQRYKGLGEMDDHQLWETTMDPENRLMARVTVDDAAEADKVF 624
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R++ I+ A LD
Sbjct: 625 DMLMGDRVEPRRDFIEENAVYSTLD 649
>gi|19705416|ref|NP_602911.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713409|gb|AAL94210.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 639
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 420/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY IEV +L +N + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPENIIEVMDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSA+E VLT+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G+ ++Q
Sbjct: 87 YGKSAMEIVLTILHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGVVHYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + V+ + GT +RF D ++F T I +++ T++ R++ELA+LN
Sbjct: 145 KYHRGKPEEDV--KVIGSCDESEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLA 239
LTI L D E+ + Y F GG+ +++ + + D + + D + +D+
Sbjct: 202 GLTIIL--SDLRKEEKKEETYKFDGGILDFLNEIVKEDTTIIEKPFYVSSEQDNVGVDVT 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 260 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K
Sbjct: 319 IREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSSLKIFLEDNPNITKIIIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 379 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 439 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDIAKLRYGKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 498 LMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKN 557
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 558 ILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 617
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 618 DKVEPRREFIEEHAEYVKNID 638
>gi|190710563|gb|ACE95112.1| gyrase subunit B [Bacillus thuringiensis serovar entomocidus]
Length = 627
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/615 (50%), Positives = 419/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN +DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNCIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPSVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++ A EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQGAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|145577991|gb|ABP82714.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 631
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/622 (50%), Positives = 426/622 (68%), Gaps = 18/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V D+GRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIVVTDDGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNAL LEV V RDG ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALPTELEVFVHRDGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + DR GT RF PD ++FT +++ +T+A R+RELAFLN
Sbjct: 142 KYERGVPAADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VALQY-NEGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKII 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 DKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYAQ-PPLFKVQQGKKIQYAYNNKEL 549
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 550 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 609
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 610 GDKVEPRRNFIQENAKYVKNLD 631
>gi|418574795|ref|ZP_13138957.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379326701|gb|EHY93817.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 644
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/619 (50%), Positives = 415/619 (67%), Gaps = 9/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGYA IEV + DN + V DNGRGIP+ +
Sbjct: 33 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYADTIEVVIEKDNWIKVTDNGRGIPVGIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E +LTVLHAGGKFGG S LHGVG SVVNALSE LEV V++D YHQ
Sbjct: 93 MGRPAVEVILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYKDRKVYHQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y +G P V+ D GT IRF D ++FT + + T+ R RELAFLN
Sbjct: 151 GYKKGVP--QFDLKVIEETDDDNTGTVIRFKADPEIFTETTTYHYETLQQRTRELAFLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
++I LR D E+ + + Y + GG++ YV+ LN +K+PLH+ + + D I +++A
Sbjct: 209 GISITLR--DERGEEVREDTYHYEGGIKSYVEMLNENKEPLHEEPIYVHQTKDEIEVEIA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ + ++ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE
Sbjct: 267 LQY-NKGFATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT I+S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V ++ K
Sbjct: 326 TREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQIVDKLFSELFERFLYEHPQVGRIVVEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A A LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K
Sbjct: 386 GIMASHARLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTKS 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+
Sbjct: 446 GRDSETQAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKIV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K
Sbjct: 505 LMTDADVDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELEK 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ +SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ VF LMG
Sbjct: 565 LKAELEPTPKWSISRYKGLGEMNADQLWETTMNPENRAMLQVSLDDAIEADQVFEMLMGD 624
Query: 600 RVDTRKELIQNAANLVNLD 618
V+ R++ I++ A NLD
Sbjct: 625 VVENRRQFIEDNAVYANLD 643
>gi|269118649|ref|YP_003306826.1| DNA gyrase subunit beta [Sebaldella termitidis ATCC 33386]
gi|268612527|gb|ACZ06895.1| DNA gyrase, B subunit [Sebaldella termitidis ATCC 33386]
Length = 642
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/625 (50%), Positives = 422/625 (67%), Gaps = 15/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN+VDEA AG+ I+V +L DN + V DNGRGIP+++H
Sbjct: 25 MYIGSTSAKGLHHLVWEVVDNSVDEALAGFCDTIKVRVLEDNIIEVIDNGRGIPVEMHEK 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE VLTVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE+LE + +DG ++Q
Sbjct: 85 MGKSTLEVVLTVLHAGGKF--NNDNYKVSGGLHGVGVSVVNALSETLEAIITKDGKVWYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P + + +D GT IRF D ++F T +++D+ + R++E+A+LN
Sbjct: 143 KYHRGVPEEDIKQ--IGEAPEDAHGTTIRFKADGEIFET-LEYDYEILLTRLKEMAYLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-----GIT 235
L I L E +K + ++ F GG+ +++ + D++ L D++ V+ +
Sbjct: 200 GLRIILSDE-RQKDKPKTDDLHFEGGIRDFLSEIADDERVLDDIIYMDDSVELDNKKRVE 258
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+ + + + + + N+I T +GGTH+ G + +LTR LN + K+ VKDKD S
Sbjct: 259 VEIAMTYTI-SQREMVYSFVNNINTHEGGTHVSGYRTALTRVLNEISKQMGLVKDKDGSF 317
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G VREGL I+S+++P P+FEGQTKT+LGN E+ VV V L YLE HP +
Sbjct: 318 QGSDVREGLVAILSIKIPEPQFEGQTKTKLGNSEITGVVSGIVGSSLKMYLEDHPKEASN 377
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K L + KA AAK+AR+LV +KS L SLPGKLADCSS E EI+IVEGDSAGG
Sbjct: 378 IIEKILMSKKAREAAKKARELVLRKSSLEVGSLPGKLADCSSKDASECEIYIVEGDSAGG 437
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDRRFQAILPLRGKILNVE+ +N EI+ +I A G G G++ E LRY
Sbjct: 438 SAKQGRDRRFQAILPLRGKILNVEKAGIGRALENAEIRAMITAFGAGF-GDEMDLEKLRY 496
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+TDADVDGAHIRTL+LTFFYR+ + L +EG IY+ PPLYKV+ GKQ+QY Y D
Sbjct: 497 HKIIIMTDADVDGAHIRTLMLTFFYRHLRELINEGHIYIAQPPLYKVQAGKQIQYVYSDE 556
Query: 536 ELKKV-KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+L+ V K N Y IQR+KGLGEM P QLWETT++PE R L ++ +EDA A+ +F+
Sbjct: 557 QLQSVTKVMDQENKRYGIQRYKGLGEMNPEQLWETTMDPEVRTLLKVSLEDATYADKMFN 616
Query: 595 SLMGARVDTRKELIQNAANLV-NLD 618
LMG +V+ R++ I+ A V NLD
Sbjct: 617 VLMGDKVEPRRQFIEEHAQYVRNLD 641
>gi|423326757|ref|ZP_17304565.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 3837]
gi|404608114|gb|EKB07597.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 3837]
Length = 646
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/629 (47%), Positives = 421/629 (66%), Gaps = 24/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AGY I V + DNS++V DNGRGIP+D+H
Sbjct: 30 MYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTISVTINEDNSITVEDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G Y Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLRATVYREGKIYEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRGK + + + D++GT + F PD +FT ++F ++T+AGR+REL+FLN
Sbjct: 148 EYSRGKALFPVKV----IGETDKRGTSVTFKPDHTIFTQTLEFSYDTLAGRLRELSFLNK 203
Query: 181 KLTIALR-----KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDG 233
L I L +E+ +P+ +E FF+ GL+E++++L+ + P+ DV+ D
Sbjct: 204 GLKITLTDKRVIEENGEPK----HEVFFSKEGLKEFIKFLDGSRVPIIEDVISMELDKGE 259
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
I +++AL + +D Y++ + Y N+I T +GGTH++G + LTRTL S +
Sbjct: 260 IPVEVALVY-NDTYAENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGMLDKLKF 318
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++G+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+
Sbjct: 319 EITGDDFREGLTAIVSVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEEHPNDA 378
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS + E+F+VEGDSA
Sbjct: 379 KIIVQKVILAAQARHAAKKAREMVQRKTVMVGGGLPGKLSDCSEQDASKCEVFLVEGDSA 438
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK--- 470
GG+AKQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K
Sbjct: 439 GGTAKQGRDRNFQAILPLRGKILNVEKAMGHKVFENEEIKNIFTALGVTMGTEEDSKALN 498
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G++ +
Sbjct: 499 LEKLRYHKVVIMCDADVDGSHIATLILTFFFRYMRGLIENGYVYIATPPLYMVKKGQRKE 558
Query: 530 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
Y + D E ++ S + S+QR+KGLGEM QLW+TT+NPE R+L+Q+ I+ EA
Sbjct: 559 YAWTDEERLELVEKMGSGS--SVQRYKGLGEMNAEQLWDTTMNPEHRILRQVTIDSLQEA 616
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ VFS LMG V R++ I+ A +D
Sbjct: 617 DRVFSMLMGDEVPPRRDFIEKNATYAKID 645
>gi|300711735|ref|YP_003737549.1| DNA topoisomerase II subunit B [Halalkalicoccus jeotgali B3]
gi|448296156|ref|ZP_21486217.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
gi|299125418|gb|ADJ15757.1| DNA topoisomerase II subunit B (DNA gyrase) [Halalkalicoccus
jeotgali B3]
gi|445582879|gb|ELY37219.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
Length = 635
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 307/613 (50%), Positives = 422/613 (68%), Gaps = 13/613 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DNA+DEA AGY I V + D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNAIDEALAGYCDTIGVTIHEDGSVSVADDGRGIPVDTHAE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEV + RDG +H
Sbjct: 87 YDRPAVEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVEIRRDGAVWHH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G P + V +++++ GT +RFWPD +F +F +T+ RIRELAFLNP
Sbjct: 145 RFDHGAPEGDIE-RVRDLEAEEETGTTVRFWPDDGIFEDR-EFVVSTLENRIRELAFLNP 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLA 239
+ I L E + E + + GG+ E+V++LN + PLH+ V + D + I +++A
Sbjct: 203 GVEITLADERDETEST----FQYDGGIREFVEYLNETRTPLHEDVLYLDDEERNIQVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + + D +L GE
Sbjct: 259 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANGEGLLDEIDENLRGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ +V E L Y E HPD +++ K
Sbjct: 318 IREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAVHEGLGTYFEEHPDTAQAVVRK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++ A KA AAK+A +L R+KS L S++LPGKLADC + P E+E+F+VEGDSAGGSAKQ
Sbjct: 378 AVEAAKARKAAKQAEELTRRKSALESTALPGKLADCQTRDPNEAELFVVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R+FQAILPL+GKILNVE+ + +N EI++LI A+G GV GE+F + RY +I+
Sbjct: 438 GRNRKFQAILPLKGKILNVEKHRLDRILENNEIRDLITAVGAGV-GEEFDIDEARYKRIV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYR+ + L + G +Y PPLY++ G + + +AE +
Sbjct: 497 IMTDADVDGAHIRTLLLTLFYRHMRPLIEAGYVYAAQPPLYRLRYGGETREAMAEAEREA 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + A IQRFKGLGEM P QLWETT+NP+ R+LK++ +EDAA A+ +FS LMG
Sbjct: 557 IIDEY--GAPDRIQRFKGLGEMNPDQLWETTMNPDNRVLKRVTVEDAAAADRMFSVLMGD 614
Query: 600 RVDTRKELIQNAA 612
V+ RK+ IQ A
Sbjct: 615 AVEPRKQFIQEHA 627
>gi|5817861|gb|AAD52967.1|AF167102_1 DNA gyrase beta subunit [Acholeplasma laidlawii]
Length = 615
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/599 (50%), Positives = 399/599 (66%), Gaps = 15/599 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA GYA I + +L + V DNGRGIP+D+HP
Sbjct: 29 MYIGSTGERGLHHLVWEIVDNSIDEALCGYADEITIEILKGEVIRVTDNGRGIPVDIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y Q
Sbjct: 89 TKRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L S D+ GT I F D +FT + +++ T+ RI++LAFLN
Sbjct: 147 KYERGIPAYDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + L D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA
Sbjct: 203 GLKLNLI--DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELA 260
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ D+YS + + N+I T +GG H +G K +L+ ++ K KD S+SGE
Sbjct: 261 MQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALSAVISKYADDLKMKKDD--SISGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K
Sbjct: 318 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 378 VLLATRARVAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+
Sbjct: 438 GRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIV 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL +
Sbjct: 497 IMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYRYNEQELNE 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + + SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG
Sbjct: 557 LLKTIETKP--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMG 613
>gi|116511733|ref|YP_808949.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|125624430|ref|YP_001032913.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris MG1363]
gi|389854795|ref|YP_006357039.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
gi|116107387|gb|ABJ72527.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|124493238|emb|CAL98205.1| topoisomerase IV subunit B [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071217|gb|ADJ60617.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
Length = 651
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 433/625 (69%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS +L+VTV +DG +Y Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTTLDVTVHKDGQKYFQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L + D +GT + F PD ++FT ++FD + +A R+RELAFLN
Sbjct: 153 EYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEIFTETVEFDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I+L + EKN+ + + + GG++ YV++LN +K + + F + ++DGI +++A
Sbjct: 209 GLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNENKTVIFEPAIFTEGEMDGIAVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH +G + +LTR +N+ K++K +K+ + +L+G+
Sbjct: 268 MQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALTRVINNYAKQNKILKENEDNLTGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++ E LT ++ +P V I+ K
Sbjct: 327 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFAEALTTFMLENPQVARKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS PE++E+FIVEGDSAGGSAK
Sbjct: 387 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNNPEQTELFIVEGDSAGGSAKS 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G D+ RYHK++
Sbjct: 447 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGG-DYDLSKARYHKLV 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PP+Y ++ G + + E
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSETKEYIQPGENQE 565
Query: 537 --LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
L++ + + ++QR+KGLGEM QLWETT++PE R++ ++ +EDAAEA+ +F
Sbjct: 566 KDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWETTMDPEHRLMARVSVEDAAEADKIF 625
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+N A +D
Sbjct: 626 DMLMGDRVEPRREFIENNAQYSTID 650
>gi|414082107|ref|YP_006990804.1| DNA gyrase subunit B [Carnobacterium maltaromaticum LMA28]
gi|412995680|emb|CCO09489.1| DNA gyrase, B subunit [Carnobacterium maltaromaticum LMA28]
Length = 645
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 419/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+AS I V + DNS++V D+GRGIPI +
Sbjct: 35 MYIGSTSGQGLHHLVWEIVDNSIDEALAGFASEINVIIEEDNSITVIDDGRGIPIGIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS LEV V +DG ++Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTILEVMVHKDGKIHYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ +GK L + DRQGT + F PD ++FT F+ ++ R+RELAFLN
Sbjct: 153 KFHQGKVGEDLKI----IGDTDRQGTTVHFVPDPEIFTETTVFEFEKLSTRVRELAFLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I++ ED + E+ + GG++ YV+ LN +K L D + + GI ++ A
Sbjct: 209 GLKISI--EDKREGQETLKEFHYEGGIKSYVEHLNHNKTVLFEDPIYIEGEQQGIVVEAA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K +LTR +N +KSK +K+ + +L+GE
Sbjct: 267 MQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTALTRVINDYARKSKLMKENEENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN E R + D+ + ++L +P V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEARTITDRLFSAHFDKFLMENPQVARRVIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+KS L S+LPGKLADCSS P SEIFIVEGDSAGGSAKQ
Sbjct: 386 GILASKARLAAKRAREVTRKKSGLEISNLPGKLADCSSKDPSISEIFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSRLFQAILPIRGKILNVEKATLDKILANEEIRSLFTAMGTGFGG-DFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY+V +GK++ Y DAEL+
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPLYQVRQGKKMVYLDSDAELEA 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ P+ IQR+KGLGEM QLW TT++PE+R + Q+ ++DA EA+ VF LMG
Sbjct: 565 YLNEIPAQPKPVIQRYKGLGEMDAEQLWSTTMDPERRRMLQVTVDDAIEADQVFEMLMGD 624
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 625 RVEPRRKFIEENAVYVQNLD 644
>gi|433426701|ref|ZP_20406924.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|448570957|ref|ZP_21639468.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|448595853|ref|ZP_21653300.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
gi|432196866|gb|ELK53287.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|445722875|gb|ELZ74526.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|445742307|gb|ELZ93802.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
Length = 639
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 419/615 (68%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L SD ++ + + F GG+ E+V++LN K LHD V+ + + +GI +++A
Sbjct: 204 GVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTALHDDVIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSESELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|354605087|ref|ZP_09023076.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
gi|353347666|gb|EHB91942.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
Length = 652
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/628 (47%), Positives = 424/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY SNIEV + DNS++V D+GRGIP D H
Sbjct: 33 MYIGDIGVKGLHHLVYEVVDNSIDEALAGYCSNIEVYINEDNSITVEDDGRGIPTDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS L V R G + Q
Sbjct: 93 EGKSALEVVLTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSNLLVAEVHRQGKVHVQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+S+G P+ + D GT I F PD +F A ++++ ++ R+RELA+LN
Sbjct: 151 KFSKGAPLGPMEI----TGETDSHGTIITFKPDDSIFI-ATEYNYEILSSRLRELAYLNK 205
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+L I ++E + + +E++ GL+E+V++L+ +++ L D + + DG+ ++
Sbjct: 206 GVRLNITDKREKDENGNYRRDEFYSTDGLKEFVKFLDENRESLIDNTIYIDTERDGVPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q+ + ++S+ + Y N+I TI+GGTH+ G + +LTRTL + S + ++G
Sbjct: 266 VAMQYNT-SFSENVHSYVNNINTIEGGTHLTGFRRALTRTLKKYAEDSGMLSKVKFEING 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VDQ++ LT YLE +P S++
Sbjct: 325 DDFREGLTAVISVKVQEPQFEGQTKTKLGNSEVSGAVDQAITTALTHYLEENPKDARSVV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
+K + A A AA++AR++V++K+VL S LPGKLADCSS +++EIF VEGDSAGG+A
Sbjct: 385 NKVILAATARHAARKAREMVQRKTVLSGSGLPGKLADCSSRDRDKTEIFFVEGDSAGGTA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG-------EDFKK 470
KQGRDR FQAI+PLRGKILNVE+ + +++NEEI N+ +ALG+ G ++
Sbjct: 445 KQGRDRTFQAIMPLRGKILNVEKAMKHRVWENEEISNMFKALGIVPGGDNNADDEQEVSL 504
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
E LRY K+II+TDADVDG+HI TL+LTFF+R+ +L G +Y+ PPLY V++GK +Y
Sbjct: 505 EKLRYGKVIIMTDADVDGSHIATLMLTFFFRHMNSLIQNGHVYIATPPLYLVKKGKNSRY 564
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
C+ + E + + + S + +QR+KGLGEM QLWETT++PE R+L+Q+ IE AAEA+
Sbjct: 565 CWTEEEREATLAEYGSKGAH-VQRYKGLGEMNAHQLWETTMSPETRILRQVTIESAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 624 RIFSMLMGDDVPPRREFIERHAKYANID 651
>gi|448298517|ref|ZP_21488545.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
gi|445591187|gb|ELY45393.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
Length = 643
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/615 (48%), Positives = 423/615 (68%), Gaps = 9/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V + DNSVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVTIHEDNSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVRRDGAVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT++RFW D +F A +F +T++ R+RELAFLN
Sbjct: 145 AFETGEPVGDME-RVRDMEPDEETGTQVRFWADTDIFE-ADEFSFSTLSNRLRELAFLNS 202
Query: 181 KLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I LR E + ++ + Y + GG+ E+V++LN + +HD ++ F + I I+
Sbjct: 203 GVRITLRDEREQTDDGEFVADTYEYDGGIREFVEYLNETRSAMHDDIIYFEDEEQNIQIE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N + + D + +L+G
Sbjct: 263 VAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAGDNGLLSDLEENLTG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+
Sbjct: 322 EDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAQAIV 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K++ A KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSA
Sbjct: 382 MKAVEAAKARKAARKAEELTRRKSALDSTSLPGKLADCQTKDPDEAELFIAEGDSAGGSA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQ R+ +QAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY K
Sbjct: 442 KQARNPDYQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKK 500
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
II+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY+V + +AE
Sbjct: 501 IIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTEAER 560
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LM
Sbjct: 561 DEIVEEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLM 620
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 621 GDAVEPRKQFIKDHA 635
>gi|392530709|ref|ZP_10277846.1| DNA gyrase subunit B [Carnobacterium maltaromaticum ATCC 35586]
Length = 645
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 418/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+AS I V + DNS++V D+GRGIPI +
Sbjct: 35 MYIGSTSGQGLHHLVWEIVDNSIDEALAGFASEINVIIEEDNSITVIDDGRGIPIGIQAK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS LEV V +DG ++Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTILEVMVHKDGKIHYQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ +GK L + DRQGT + F PD ++FT F+ ++ R+RELAFLN
Sbjct: 153 KFHQGKVGEDLKI----IGDTDRQGTTVHFVPDPEIFTETTVFEFEKLSTRVRELAFLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I++ ED + E+ + GG++ YV+ LN +K L D + + GI ++ A
Sbjct: 209 GLKISI--EDKREGQETLKEFHYEGGIKSYVEHLNHNKTVLFEDPIYIEGEQQGIVVEAA 266
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +L +AN+I T +GGTH G K +LTR +N +KSK +K+ + +L+GE
Sbjct: 267 MQY-TDGYHTNLLSFANNIHTYEGGTHESGFKTALTRVINDYARKSKLMKENEENLTGED 325
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN E R + D+ + ++L +P V ++ K
Sbjct: 326 VREGLTAVISIKHPDPQFEGQTKTKLGNSEARTITDRLFSAHFDKFLMENPQVARRVIEK 385
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+KS L S+LPGKLADCSS P SEIFIVEGDSAGGSAKQ
Sbjct: 386 GILASKARLAAKRAREVTRKKSGLEISNLPGKLADCSSKDPSISEIFIVEGDSAGGSAKQ 445
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++
Sbjct: 446 GRSRLFQAILPIRGKILNVEKATLDKILANEEIRSLFTAMGTGFGG-DFDVSKARYHKLV 504
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY+V +GK++ Y DAEL+
Sbjct: 505 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPLYQVRQGKKMVYLDSDAELEA 564
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
P+ IQR+KGLGEM QLW TT++PE+R + Q+ ++DA EA+ VF LMG
Sbjct: 565 YLKEIPAQPKPVIQRYKGLGEMDAEQLWSTTMDPERRRMLQVTVDDAIEADQVFEMLMGD 624
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 625 RVEPRRKFIEENAVYVQNLD 644
>gi|190710575|gb|ACE95118.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/615 (50%), Positives = 421/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P +WETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTLIWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|301308180|ref|ZP_07214134.1| DNA gyrase, B subunit [Bacteroides sp. 20_3]
gi|423339843|ref|ZP_17317583.1| DNA gyrase, B subunit [Parabacteroides distasonis CL09T03C24]
gi|300833650|gb|EFK64266.1| DNA gyrase, B subunit [Bacteroides sp. 20_3]
gi|409228991|gb|EKN21873.1| DNA gyrase, B subunit [Parabacteroides distasonis CL09T03C24]
Length = 651
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 422/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T +GLHHLVYE++DN++DEA AGY + I+V + DNS++V D+GRGIP+D+H
Sbjct: 32 MYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVVINEDNSITVTDDGRGIPVDIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 92 EGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ V +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN
Sbjct: 150 EFSCGKPLH----DVQVIDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNA 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L + E + F GL+E+V++++ K+ L DV+ + GI ++
Sbjct: 205 GITLRLTDKRVLKEDGSFKSEIFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + + +Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G
Sbjct: 265 VALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+
Sbjct: 324 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+A
Sbjct: 384 DKVILAAQARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E L
Sbjct: 444 KQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+
Sbjct: 504 RYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWT 563
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + ++ + SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+
Sbjct: 564 EQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQ 623
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+F+ LMG V R+E I+ A N+D
Sbjct: 624 IFAMLMGEDVGPRREFIEENATYANID 650
>gi|150010130|ref|YP_001304873.1| DNA gyrase subunit B [Parabacteroides distasonis ATCC 8503]
gi|149938554|gb|ABR45251.1| DNA gyrase, B subunit [Parabacteroides distasonis ATCC 8503]
Length = 651
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 422/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T +GLHHLVYE++DN++DEA AGY + I+V + DNS++V D+GRGIP+D+H
Sbjct: 32 MYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVVINEDNSITVTDDGRGIPVDIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 92 EGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ V +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN
Sbjct: 150 EFSCGKPLH----DVQVIDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNA 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L + E + F GL+E+V++++ K+ L DV+ + GI ++
Sbjct: 205 GITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + + +Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G
Sbjct: 265 VALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+
Sbjct: 324 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+A
Sbjct: 384 DKVILAAQARHAARKARELVQRKSPLTGGGLPGKLADCSSKDASICELFLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E L
Sbjct: 444 KQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+
Sbjct: 504 RYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWT 563
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + ++ + SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+
Sbjct: 564 EQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQ 623
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+F+ LMG V R+E I+ A N+D
Sbjct: 624 IFAMLMGEDVGPRREFIEENATYANID 650
>gi|319952084|ref|YP_004163351.1| DNA gyrase subunit b [Cellulophaga algicola DSM 14237]
gi|319420744|gb|ADV47853.1| DNA gyrase subunit B [Cellulophaga algicola DSM 14237]
Length = 653
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/627 (46%), Positives = 424/627 (67%), Gaps = 18/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA G+ I VA+ DNS++V DNGRGIP+D+H
Sbjct: 35 MYIGDVGVRGLHHLVYEVVDNSIDEAMGGHCDTITVAINEDNSITVRDNGRGIPVDIHKK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+R+G Y Q
Sbjct: 95 EGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSKDLKATVFRNGTIYEQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GK + V + + +GT + F+PD+ +FT ++F+++T+A R+REL++LN
Sbjct: 153 EYQKGKALYP----VKSIGETEIRGTEVTFYPDETIFTQTVEFNYDTLANRMRELSYLNK 208
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGIT 235
++I + R++D D + E F++ GL+E++++L+ +++PL V+ + +GI
Sbjct: 209 GVSITMTDKRQKDKDTPSGFHEERFYSEEGLKEFIKFLDGNREPLIKGVISMEGEKNGIP 268
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL S ++ +
Sbjct: 269 VEVAMVYNT-SYTENLHSYVNNINTHEGGTHLSGFRRGLTSTLKKYADASGMLEKLKFEI 327
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L++YLE +P+
Sbjct: 328 QGDDFREGLTAIISVKVGEPQFEGQTKTKLGNREVSAAVSQAVSEMLSDYLEENPEDAKI 387
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K + A A AA +AR++V++K+V+ LPGKL+DCS P E+F+VEGDSAGG
Sbjct: 388 IVQKVVLAATARHAATKAREMVQRKTVMSIGGLPGKLSDCSDQDPVNCEVFLVEGDSAGG 447
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKE 471
+AKQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ E
Sbjct: 448 TAKQGRDRMFQAILPLRGKILNVEKAMRHRVFENEEIKNIYTALGVSIGTEEDSQALNLE 507
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
LRYHK++I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G + +Y
Sbjct: 508 KLRYHKVVIMCDADVDGSHIETLILTFFFRYMRELVEAGHVYIATPPLYLVKKGAKKRYA 567
Query: 532 YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
++D E ++ SF N IQR+KGLGEM QLW+TT+NPE R L+Q+VIE+A E +
Sbjct: 568 WNDKERDEIAESF--NGSVGIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVVIENATETDR 625
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
VFS LMG V R+E I+ A N+D
Sbjct: 626 VFSMLMGDEVPPRREFIEKNAVYANID 652
>gi|385838590|ref|YP_005876220.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
gi|358749818|gb|AEU40797.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
Length = 651
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 433/625 (69%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS +L+VTV +DG +Y Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTTLDVTVHKDGQKYFQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L + D +GT + F PD ++FT ++FD + +A R+RELAFLN
Sbjct: 153 EYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEIFTETVEFDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I+L + EKN+ + + + GG++ YV++LN +K + + F + ++DGI +++A
Sbjct: 209 GLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNENKTVIFEPAIFTEGEMDGIAVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH +G + +LTR +N+ K++K +K+ + +L+G+
Sbjct: 268 MQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALTRVINNYAKQNKILKENEDNLTGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++ E LT ++ +P V I+ K
Sbjct: 327 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFAEALTTFMLENPKVARKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS PE++E+FIVEGDSAGGSAK
Sbjct: 387 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNNPEQTELFIVEGDSAGGSAKS 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G D+ RYHK++
Sbjct: 447 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGG-DYDLSKARYHKLV 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PP+Y ++ G + + E
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSETKEYIQPGENQE 565
Query: 537 --LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
L++ + + ++QR+KGLGEM QLWETT++PE R++ ++ +EDAAEA+ +F
Sbjct: 566 KDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWETTMDPEHRLMARVSVEDAAEADKIF 625
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+N A +D
Sbjct: 626 DMLMGDRVEPRREFIENNAQYSTID 650
>gi|78707349|gb|ABB46480.1| DNA gyrase subunit B [Acholeplasma granularum]
gi|78707351|gb|ABB46481.1| DNA gyrase subunit B [Acholeplasma granularum]
gi|78707353|gb|ABB46482.1| DNA gyrase subunit B [Acholeplasma granularum]
Length = 587
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/595 (50%), Positives = 398/595 (66%), Gaps = 15/595 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA AGYA I + +L N V V DNGRGIP+D+HP
Sbjct: 7 MYIGSTGERGLHHLVWEIVDNSIDEALAGYADEINIEILKGNIVRVTDNGRGIPVDIHPK 66
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y Q
Sbjct: 67 TGRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEYFIVEIHKDGTIYEQ 124
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + + ++ GT I F D ++FT ++ T+ RI++LAFLN
Sbjct: 125 RYERGIPAYDLKT----IGTTEKSGTVITFLADPKIFTETTVYNLETLKNRIQQLAFLNK 180
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + L DS P++ + + GG+ EYV++LN K +H D++ K+ DGIT++LA
Sbjct: 181 GLKLHLT--DSRPDEPIAESFHYEGGIVEYVKFLNQSKSKIHPDIIYIDKEQDGITVELA 238
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ D+YS + + N+I T +GG H +G K +LTR ++ K KD S+SGE
Sbjct: 239 LQFV-DSYSPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGED 295
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P I+ K
Sbjct: 296 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLLENPQQAKMIVEK 355
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A +AA++A++L R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 356 ILLATRARVAARKAKELTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 415
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A+G G+ ++F RYHKI+
Sbjct: 416 GRDSEFQAIMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGI-ADEFDITKARYHKIV 474
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ + L D G +Y PPLYKV G+ +Y Y D EL +
Sbjct: 475 IMTDADVDGAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKVSWGRNEKYAYTDEELNE 534
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+ S + SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS
Sbjct: 535 IVSGIETKP--SIQRYKGLGEMNAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFS 587
>gi|354582066|ref|ZP_09000969.1| DNA gyrase, B subunit [Paenibacillus lactis 154]
gi|353200683|gb|EHB66143.1| DNA gyrase, B subunit [Paenibacillus lactis 154]
Length = 636
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/624 (51%), Positives = 425/624 (68%), Gaps = 22/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+E++DN++DEA AG +IE+ + DNSV+V DNGRGIP+ +
Sbjct: 28 MYIGSTSVKGLHHLVWEVVDNSIDEAMAGICDHIEIIVHEDNSVTVIDNGRGIPVGENAK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS LE V+TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q
Sbjct: 88 LKKSTLEVVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSTKVVVQVKRDGHIYQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P + + + GT + F PD ++FT +FD+NT+ R+RELAFLN
Sbjct: 146 EYRRGVPQYDIKV----IGDTEETGTTVTFLPDPEIFTETTEFDYNTLLTRVRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGIT 235
+ + L E + ++YF + GG+ EYV++LN K+ LH+ V G R D I
Sbjct: 202 GIALTLTDE-----RTGASDYFKYEGGIIEYVKFLNEKKEALHEEPIYVEGSR---DNIQ 253
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
++++LQ+ +D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD +L
Sbjct: 254 VEISLQY-NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKTGMIKDNSNNL 312
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SG+ VREGLT IISV+VP P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V
Sbjct: 313 SGDDVREGLTAIISVKVPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLQENPSVSRR 372
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
IL K+L A +A AA++AR++ R+KS L S+LPGKLADCSS SE++IVEGDSAGG
Sbjct: 373 ILEKALQASRAREAARKAREMTRRKSALEVSALPGKLADCSSKDASISELYIVEGDSAGG 432
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ +DF RY
Sbjct: 433 SAKQGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAIITALGTGI-ADDFDLSKARY 491
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
HKIII+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPL+K+ER K V+Y +
Sbjct: 492 HKIIIMTDADVDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQPPLFKIERNKVVRYAGSEK 551
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
E ++ F NA ++IQR+KGLGEM QLWETT++PE R + Q+ IEDA A+ +F +
Sbjct: 552 ERDEIIKEFGENAKFNIQRYKGLGEMNATQLWETTMDPESRTMLQVTIEDAMLADTLFDT 611
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG V+ R++ IQ A V NLD
Sbjct: 612 LMGDNVEPRRDFIQEHAKSVRNLD 635
>gi|402309693|ref|ZP_10828676.1| DNA gyrase, B subunit [Eubacterium sp. AS15]
gi|400371189|gb|EJP24154.1| DNA gyrase, B subunit [Eubacterium sp. AS15]
Length = 640
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 307/622 (49%), Positives = 436/622 (70%), Gaps = 15/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AGY NI V++ +N ++V D+GRGIP+++HP
Sbjct: 29 MYIGSTGSKGLHHLVYEVVDNAIDEALAGYCKNIYVSIDVNNGITVIDDGRGIPVEIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V +DG Y Q
Sbjct: 89 TGKSTLETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKDGKIYKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G PV+ + HV+ + +GT I F PD+ VF + + + R+RELAFLN
Sbjct: 147 EFEKGNPVSDV--HVVGDCPMEERGTCISFLPDETVFEETV-YSFEVLEHRLRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGIT--IDL 238
++I L ED+ + +Y + GG+ EYV+ LN +++ L +V+ F K + + I++
Sbjct: 204 GISITL--EDNRTIEKVSRKYHYEGGIIEYVKALNKNREALTEVIYFNKLDEEFSYDIEI 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +DAY + + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD + +GE
Sbjct: 262 AMQY-TDAYVENIYSFANNINTVEGGMHLIGFKSALTRVVNDYARKNNMLKEKDENFTGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT IISV++P P++EGQTKT+LGNP++R V+Q + + +LE +P I+
Sbjct: 321 DIREGLTAIISVKLPEPQYEGQTKTKLGNPQMRSSVEQITVDQVATFLEENPATARIIME 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + + +A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGGSAK
Sbjct: 381 KCMRSQRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
+GR+ + QAILPLRGKILNVE+ +++ I+N+I A G G+ G +F LRYHKI
Sbjct: 441 EGRNSQNQAILPLRGKILNVEKARLDKALQSDTIKNMITAFGCGI-GSEFDDSKLRYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II++DADVDGAHIRTL+LTFF+RY + L ++G +Y+ PPL+ +E+GK+ Y Y EL+
Sbjct: 500 IIMSDADVDGAHIRTLILTFFFRYMRPLIEKGYVYIAQPPLFSIEKGKKTYYAYSPEELE 559
Query: 539 -KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+ A+ S R KGLGEM +L +TT++P +R+L ++ +EDA A+ +F LM
Sbjct: 560 AKLNEIGRERAVVS--RNKGLGEMDAEELGDTTMDPAKRVLLKVNLEDAIAADEIFDILM 617
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+E IQ NA + NLD
Sbjct: 618 GDKVEPRREFIQKNAKYVENLD 639
>gi|292655722|ref|YP_003535619.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|448289708|ref|ZP_21480871.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|302425107|sp|D4GZ01.1|GYRB_HALVD RecName: Full=DNA gyrase subunit B
gi|291372625|gb|ADE04852.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|445581225|gb|ELY35586.1| DNA gyrase subunit B [Haloferax volcanii DS2]
Length = 639
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/615 (50%), Positives = 419/615 (68%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L SD ++ + + F GG+ E+V++LN K LHD V+ + + +GI +++A
Sbjct: 204 GVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTALHDDVIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPAESELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|330997801|ref|ZP_08321636.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841]
gi|329569689|gb|EGG51454.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841]
Length = 655
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/635 (47%), Positives = 422/635 (66%), Gaps = 28/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE +DN++DEA AGY ++IEV + DNS++V DNGRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 91 EHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFREGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V + +GTR +FWPD +F T + + +A R+RELAFLN
Sbjct: 149 EYECGKPLYPVKV----VGETELRGTRQQFWPDSSIFITTT-YKYEILANRMRELAFLNA 203
Query: 181 KLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
+TI L + E+ P ++ GL+E+V+++++ + L +DV+ + G+
Sbjct: 204 GITIILTDMREKDENGVPRSETFHS---KDGLKEFVRYIDSSRIHLFNDVIYLNTEKQGV 260
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-----NSLGKKSKTVK 289
I++A+ + ++ Y++ + Y N+I TI+GGTH+ G + +LTRTL + K+ + ++
Sbjct: 261 PIEVAIMY-NNGYTENIHSYVNNINTIEGGTHLAGFRTALTRTLKKYAEDEYAKELEKLE 319
Query: 290 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 349
+ +SGE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE H
Sbjct: 320 KNKVEISGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSYYLEEH 379
Query: 350 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 409
P I+ K + A A +AA++AR+ V++KS + +PGKLADCS E+FIVE
Sbjct: 380 PKEAKLIVDKVILAATARVAARKARESVQRKSPMSGGGMPGKLADCSDKDAANCELFIVE 439
Query: 410 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK-GEDF 468
GDSAGGSAKQGR R++QAILP+RGKI NVER +++EE+ N+I+ALG+ GED
Sbjct: 440 GDSAGGSAKQGRSRQYQAILPIRGKIFNVERVMWHKAFEHEEVNNIIQALGVRFGLGEDS 499
Query: 469 KK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 525
K+ E LRY+K+II+TDADVDG+HI TLL+T FYRY L +G +Y+ PPLY+ ++G
Sbjct: 500 KEANYEKLRYYKVIIMTDADVDGSHIDTLLMTLFYRYMPELIQKGHLYIATPPLYRCKKG 559
Query: 526 KQVQYCYDDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
K +YCY +A+ + + S + QR+KGLGEM P QLWETT+NPE R+LKQ+ I
Sbjct: 560 KIEEYCYTEADRLRFMQQYNNGSEQGMTTQRYKGLGEMNPEQLWETTMNPETRLLKQVTI 619
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
EDAA A+ VFS LMG V R+E I+ A N+D
Sbjct: 620 EDAAGADYVFSMLMGEDVGPRREFIEQNATYANID 654
>gi|310825640|ref|YP_003957997.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308737374|gb|ADO35034.1| hypothetical protein ELI_0009 [Eubacterium limosum KIST612]
Length = 640
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 436/620 (70%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY NI V + +N ++V D+GRGIP D++
Sbjct: 32 MYIGSTGKQGLHHLVYEVVDNSIDEALAGYCKNIVVTIDKNNGITVVDDGRGIPTDMNHK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K+ +E LTVLHAGGKFGG VSGGLHGVG+SVVNALS L V V ++ YHQ
Sbjct: 92 MKKTGVELALTVLHAGGKFGGGGY--KVSGGLHGVGVSVVNALSSELTVEVKQNKKIYHQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++GK + L + +R GT + F PD +F + +D + + R+RELAFLN
Sbjct: 150 TFAKGKKTSELEVTG----NTNRTGTTVHFQPDPDIFDELV-YDFDVLEHRLRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
++I L E + EK + Y + GG+ Y++++N +K PL++ + + K++D ++++A
Sbjct: 205 GVSITLADE-REAEKRK-ETYCYEGGIRSYIEYMNKNKDPLYEQIAYYEKEMDDYSLEIA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ + YS+ + YAN+I T +GG+H+ G K++LTRT+N+ +K+ +K D +L+GE
Sbjct: 263 FQYTA-GYSENIYSYANNIYTPEGGSHLNGFKSALTRTINTYARKNNYIKGNDKNLTGED 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS+++ +P+FEGQTKT+LGNPEV+ +V+ V + L+ +LE +P + +++ K
Sbjct: 322 VREGLTAIISIKLLDPQFEGQTKTKLGNPEVKGIVETIVGDELSAFLEENPTIAKTVIEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+LSA +A AAK+AR+L R+KS L +++LPGKLADC P SEIFIVEGDSAGGSAK
Sbjct: 382 TLSASRAREAAKKARELTRRKSALDTTALPGKLADCREKDPSMSEIFIVEGDSAGGSAKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD R QAILPLRGKILNVE+ + + ++++I A G GV GEDF E RYHKII
Sbjct: 442 GRDSRIQAILPLRGKILNVEKSRLDRILTADTLKSMITAFGTGV-GEDFNVEKARYHKII 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L +EG +Y+ PPL+KV RG+ V+Y Y++ L K
Sbjct: 501 IMTDADVDGAHIRTLLLTFFYRYMRGLIEEGYVYIAQPPLFKVARGQHVEYVYNEKALDK 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + Y+IQR+KGLGEM QLWETT++P R+L ++ IEDAA A+ VF+ LMG
Sbjct: 561 MFED-KDRSKYTIQRYKGLGEMDAHQLWETTMDPSVRILNRVNIEDAAYADEVFTILMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
+V RKE I+ NAA + NLD
Sbjct: 620 KVQPRKEFIERNAAKVKNLD 639
>gi|268324621|emb|CBH38209.1| DNA gyrase subunit B [uncultured archaeon]
Length = 635
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/622 (48%), Positives = 428/622 (68%), Gaps = 16/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHL E++DN+VDEA G+ ++I V + DNSV+V DNGRGIP+D+H
Sbjct: 25 MYIGDTGTRGLHHLANEVIDNSVDEAIIGFCTSIVVIIHPDNSVTVTDNGRGIPVDMHSE 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N SALE V+T LHAGGKF + Y V+GGLHGVG+SVVNALSE EV V R+G Y+Q
Sbjct: 85 YNLSALEVVMTKLHAGGKF--DNKVYKVAGGLHGVGISVVNALSEWQEVEVLREGKRYYQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GK V + ++ GTR+RF PD +F +FD + +A R+RELAFLN
Sbjct: 143 RYEHGKAVCEVKELSYTGENNGECGTRVRFKPDSTIFGV-YEFDAHLLATRLRELAFLNR 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L+++L+ E S E+ + + GG+ +++++N +KK LH + F + D + + + L
Sbjct: 202 GLSLSLKDERSGEER----AFKYEGGITSFLEYINRNKKVLHSPITFEGEKDDVKVAIGL 257
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D+Y++ + + N+++T++GG H+ G KA+LTR LN GK + + K ++L G+ V
Sbjct: 258 QY-NDSYAENIFSFVNNVKTVEGGKHLSGFKAALTRVLNEYGKSNNML--KKVNLDGDDV 314
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL +IS+++ P+FEGQTKT+LGN EV+ +V+ V+E+L ++L+ +P D+I+ K+
Sbjct: 315 REGLAAVISLKLREPQFEGQTKTKLGNSEVKGIVESFVREHLWDFLDENPKDGDAIIRKA 374
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A AA+ AR++VR+K + SLPGKLADCS P + EI+IVEGDSAGGSAKQ
Sbjct: 375 LEASRAREAARHAREIVRKKDSF-ADSLPGKLADCSERDPAKKEIYIVEGDSAGGSAKQA 433
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RD+ FQAILP+RGKILNVE+ + K+ EI+ LI ALG G+ G+DF E RY+KIII
Sbjct: 434 RDKNFQAILPIRGKILNVEKARLDKILKSNEIRTLITALGAGI-GDDFDMEKARYNKIII 492
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
++DADVDGAHIRTLLLTFFYRY + L IYV +PPLY V++GK+++Y + D E +
Sbjct: 493 MSDADVDGAHIRTLLLTFFYRYMQELVSANHIYVALPPLYMVKKGKEIRYAFSDDEYVNI 552
Query: 541 KSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+A IQ +KGLGEM P QLWETT+NP R +K + +EDAAE + +F+ LM
Sbjct: 553 LDELNVKEGDAGVKIQHYKGLGEMNPEQLWETTMNPATRGIKLVTLEDAAEVDWLFTVLM 612
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G V+ R+ IQ +A ++NLD
Sbjct: 613 GEEVEPRRNFIQAHAKEVMNLD 634
>gi|256838953|ref|ZP_05544463.1| DNA gyrase, B subunit [Parabacteroides sp. D13]
gi|262382583|ref|ZP_06075720.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B]
gi|410104251|ref|ZP_11299165.1| DNA gyrase, B subunit [Parabacteroides sp. D25]
gi|423333431|ref|ZP_17311212.1| DNA gyrase, B subunit [Parabacteroides distasonis CL03T12C09]
gi|256739872|gb|EEU53196.1| DNA gyrase, B subunit [Parabacteroides sp. D13]
gi|262295461|gb|EEY83392.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B]
gi|409228311|gb|EKN21203.1| DNA gyrase, B subunit [Parabacteroides distasonis CL03T12C09]
gi|409234652|gb|EKN27479.1| DNA gyrase, B subunit [Parabacteroides sp. D25]
Length = 651
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 422/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T +GLHHLVYE++DN++DEA AGY + I+V + DNS++V D+GRGIP+D+H
Sbjct: 32 MYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVVINEDNSITVTDDGRGIPVDIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 92 EGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ V +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN
Sbjct: 150 EFSCGKPLH----DVQVIDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNA 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L + E + F GL+E+V++++ K+ L DV+ + GI ++
Sbjct: 205 GITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + + +Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G
Sbjct: 265 VALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+
Sbjct: 324 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+A
Sbjct: 384 DKVILAAQARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E L
Sbjct: 444 KQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+
Sbjct: 504 RYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWT 563
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + ++ + SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+
Sbjct: 564 EQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQ 623
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+F+ LMG V R+E I+ A N+D
Sbjct: 624 IFAMLMGEDVGPRREFIEENATYANID 650
>gi|78707341|gb|ABB46477.1| DNA gyrase subunit B [Acholeplasma brassicae]
Length = 591
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/596 (52%), Positives = 403/596 (67%), Gaps = 13/596 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DE AGYA I + LL +N V V DNGRGIP+DLHP
Sbjct: 7 MYIGSTGERGLHHLVWEIVDNSIDECMAGYADEITIELLPNNIVKVTDNGRGIPVDLHPK 66
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T++ A+ET+LTVLHAGGKF G S Y VSGGLHGVG SVVNAL+ VT+ RDG Y Q
Sbjct: 67 THRPAVETILTVLHAGGKFDGKS--YKVSGGLHGVGSSVVNALTVWFRVTIARDGKLYQQ 124
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG P L + GT I F D ++F +D + RI+ELAFLN
Sbjct: 125 EYKRGVPQYDLKV----IGESSHTGTVIEFLADDEIFKEVNTYDFERLRNRIQELAFLNR 180
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I + + D EK+ Y Y + GG+ EYV +LNT K+ ++ V+ K++DGIT++L
Sbjct: 181 NVKINISDQRDPKTEKHVYYSYQYEGGIIEYVHFLNTSKQEVNKTVIYIEKEIDGITVEL 240
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ SD YS + +AN+I T +GG H +G K +LTR L ++ +K KD S GE
Sbjct: 241 ALQYNSD-YSTNLFSFANNIHTHEGGMHEDGFKLALTRVLGRYAQEQNILK-KDESFIGE 298
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
REGLT I+S++ P+P+FEGQTKT+LGNPEVR++ Q E L YL +P +I+
Sbjct: 299 DTREGLTAIVSIKHPDPQFEGQTKTKLGNPEVRQITSQITGEILERYLMENPADAKAIIE 358
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K L A +A +AA++AR+ R+KS L KLADC + +PE SEI+IVEGDSAGGSAK
Sbjct: 359 KILMASRARIAARKAREATRRKSPLDMLGFASKLADCRNKSPEISEIYIVEGDSAGGSAK 418
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRD FQAILPLRGK+LNVE+ + N+EI ++I+A G G+ GEDF RYHKI
Sbjct: 419 QGRDSEFQAILPLRGKVLNVEKSRLDKILSNKEILSMIQAFGTGI-GEDFDAAKARYHKI 477
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+I+TDADVDGAHIRTLLLTF YR+ K L D G +Y+ PPLYKV+ GK+V+Y YD+ L
Sbjct: 478 VIMTDADVDGAHIRTLLLTFLYRHLKGLIDMGYVYIAQPPLYKVQSGKKVEYVYDEERLP 537
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
KV +F IQR+KGLGEM P QLWETT++P R L ++ ++DA A+ VFS
Sbjct: 538 KVLEAFGGRP--QIQRYKGLGEMNPEQLWETTMDPTTRTLLRVSLQDAMNADQVFS 591
>gi|270307455|ref|YP_003329513.1| DNA gyrase subunit B [Dehalococcoides sp. VS]
gi|270153347|gb|ACZ61185.1| DNA gyrase, B subunit [Dehalococcoides sp. VS]
Length = 642
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/620 (50%), Positives = 416/620 (67%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + D SVSV DNGRGIP+D+HP
Sbjct: 36 MYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVIMFKDGSVSVEDNGRGIPVDIHPV 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALETV+TVLHAG KFGG + Y VSGGLHGVG SVVNAL+E V V R+G Y Q
Sbjct: 96 TKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALAEWTTVKVRRNGKIYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP T L + D GT F D Q+F+T ++D + R+RE+A+LN
Sbjct: 154 SYQRGKPSTPLE----EIGVSDGSGTTTIFKADSQIFSTT-EYDFEILTDRLREIAYLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + + E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A
Sbjct: 209 GLEVYIYDEQSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YSD+ L +AN + TIDGGTH+ G +++LTR N KSK +KD D +L G+
Sbjct: 265 IQY-NDGYSDSTLTFANCVNTIDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+ I+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K
Sbjct: 324 VREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVESAVAEQLSLYLEEHPDDTKRILEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A KA AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQ
Sbjct: 384 CITAAKAREAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++
Sbjct: 444 GRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGID-NDFDPAKLRYNRLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE +
Sbjct: 503 LMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSTEHWVYNDAEKET 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S S + IQR+KGLGEM QLW TT++P R L ++ +EDAA+A+ +F+ LMG
Sbjct: 563 LLSQTKSTKV-DIQRYKGLGEMSAEQLWRTTMDPASRTLLEVKVEDAAKADQIFNLLMGG 621
Query: 600 RVDTRKELIQNAANLV-NLD 618
V RK IQ+ + V NLD
Sbjct: 622 EVAPRKAFIQSHSRTVKNLD 641
>gi|206895598|ref|YP_002246982.1| DNA gyrase B subunit [Coprothermobacter proteolyticus DSM 5265]
gi|206738215|gb|ACI17293.1| DNA gyrase, B subunit [Coprothermobacter proteolyticus DSM 5265]
Length = 637
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/621 (48%), Positives = 415/621 (66%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHL++EI+DNA+DEA AG+ +I+V L D SV V DNGRGIP+++HP
Sbjct: 30 MYIGSTDKNGLHHLIWEIVDNAIDEAMAGFCDHIKVVLYKDGSVLVEDNGRGIPVEIHPQ 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E VLT LHAGGKFGG + Y SGGLHGVGLSVVNALSE LE+TV RDG Y Q
Sbjct: 90 EGRPTVEVVLTKLHAGGKFGGQA--YKASGGLHGVGLSVVNALSEWLEITVKRDGTVYWQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKPVT + + D + T ++F PDK +F +FD+ I R+RELAFLN
Sbjct: 148 RYEFGKPVTEVK-EIGQYDDTESSATIVQFKPDKSIFADT-RFDYEVIRQRLRELAFLNS 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
++TI L++E S+PE + F GL ++ + + + DV+ F + +++A
Sbjct: 206 EVTIELQREGSEPEF-----FHFESGLAGLLEEVANSSEKIIDVLRFSGAQQDVQVEVAF 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
+ D + + ++ + NS+RT+DGGTH++G+++++++TL +G++ +KD ++S +
Sbjct: 261 TYVDD-FDENIVSFVNSVRTVDGGTHVQGLRSAISKTLAEVGRRKGLLKDNNVS--SDDF 317
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
R+GL +++VRVP PEFEGQTK +LG+ VR +V+ V + YLE DV +++ ++
Sbjct: 318 RQGLRAVVAVRVPEPEFEGQTKGKLGSKYVRNIVEDVVSKAFESYLETQNDVTKTLIQRA 377
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L++ + KR R++++ + + S+ LPGKL+DCSS E+ E+ IVEG+SAGGSAKQG
Sbjct: 378 LASAEMRETFKRTREMMKNRLRVESTVLPGKLSDCSSRDVEKRELLIVEGESAGGSAKQG 437
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR QA+LPLRGKILNVE+ + NEEIQ LI A+G GV GE F LRY KIII
Sbjct: 438 RDRTIQAVLPLRGKILNVEKASWKRVLDNEEIQALIAAIGTGV-GEHFNFAKLRYGKIII 496
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER--GKQVQYCYDDAELK 538
+TDADVDGAHIRTLLLTFF+R + L +EG IY+ PPLYK+ER K + Y Y D +L+
Sbjct: 497 MTDADVDGAHIRTLLLTFFFRMMRPLVEEGHIYIAQPPLYKIERKKSKDIIYLYSDEDLQ 556
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ IQR+KGLGEM QLWETTLNPE R L + +EDA +A+ +FS LMG
Sbjct: 557 AFLREHEGEN-FEIQRYKGLGEMNAEQLWETTLNPETRNLYMVTVEDAEKADELFSVLMG 615
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V RKE I ANLV NLD
Sbjct: 616 EKVQPRKEFIFANANLVKNLD 636
>gi|255012609|ref|ZP_05284735.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_7]
Length = 620
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 422/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T +GLHHLVYE++DN++DEA AGY + I+V + DNS++V D+GRGIP+D+H
Sbjct: 1 MYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVVINEDNSITVTDDGRGIPVDIHEK 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 61 EGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQ 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ V +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN
Sbjct: 119 EFSCGKPLHD----VQVIDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNA 173
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L + E + F GL+E+V++++ K+ L DV+ + GI ++
Sbjct: 174 GITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVE 233
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + + +Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G
Sbjct: 234 VALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQG 292
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+
Sbjct: 293 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIV 352
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+A
Sbjct: 353 DKVILAAQARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTA 412
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E L
Sbjct: 413 KQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKL 472
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+
Sbjct: 473 RYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWT 532
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + ++ + SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+
Sbjct: 533 EQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQ 592
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+F+ LMG V R+E I+ A N+D
Sbjct: 593 IFAMLMGEDVGPRREFIEENATYANID 619
>gi|329770365|ref|ZP_08261747.1| DNA gyrase subunit B [Gemella sanguinis M325]
gi|328836488|gb|EGF86148.1| DNA gyrase subunit B [Gemella sanguinis M325]
Length = 638
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/619 (48%), Positives = 427/619 (68%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AG+ I VA+ DN + V DNGRGIPID+
Sbjct: 30 MYIGSTSSKGLHHLVWEIVDNSIDEALAGHCDTITVAIEKDNWIRVEDNGRGIPIDIQEQ 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALE +LTVLHAGGKFGG S LHGVG SVVNALS +LE V RDG +
Sbjct: 90 TGKPALEVILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEAYVHRDGKIHSM 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG V +T + D+ GT IRF D ++F ++++ + RIRELAFLN
Sbjct: 148 MFERGDVVQGITV----IGETDKTGTTIRFKADPEIFQETTVYEYDILRTRIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
+TI L+ E EK + + + GGL EYV+ LN +K LH+ + +++G +++++
Sbjct: 204 GITIILKDEREGQEKEE--TFCYEGGLLEYVEMLNENKDSLHEAIYVHGEMEGKEVEISM 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ + Y+ +L YAN+I T +GGTH G K +LTR +NS GKK+K +K+K+ SL+G+ V
Sbjct: 262 QYNT-GYASNILSYANNINTHEGGTHESGFKTALTRIINSYGKKNKLIKEKE-SLTGDDV 319
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGL IIS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P V I+ K
Sbjct: 320 REGLVAIISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKVAKIIVEKG 379
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A +AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK G
Sbjct: 380 LQASRARIAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLG 439
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
R+ +FQAILPL+GKILNVE+ + N+E+++LI A+G+G+ GE + LRYHKI+I
Sbjct: 440 RNSKFQAILPLKGKILNVEKVRIDKVLSNDEVRSLITAVGMGI-GETLNIDKLRYHKIVI 498
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDG+HIRTLLLTFF+RY + L + G +Y+ PPL+ ++ GK+ YC+ D ELK+
Sbjct: 499 MTDADVDGSHIRTLLLTFFFRYMRELIEAGYVYIARPPLFGLKVGKKEYYCHTDEELKEN 558
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ ++ Y++QR+KGLGEM +LW+TT++PE R++ ++ I+DA A+ F +LMG +
Sbjct: 559 IEKYAADKKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYKVSIDDAQRADAAFDTLMGEK 618
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R++ I +NA N+VNLD
Sbjct: 619 VEPRRKFIEENALNVVNLD 637
>gi|124008106|ref|ZP_01692804.1| DNA gyrase, B subunit [Microscilla marina ATCC 23134]
gi|123986354|gb|EAY26167.1| DNA gyrase, B subunit [Microscilla marina ATCC 23134]
Length = 659
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/629 (48%), Positives = 423/629 (67%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHL++E++DN++DEA AGY +I V + DNS++V DNGRGIP +
Sbjct: 39 MYIGDVGVRGLHHLIWEVVDNSIDEALAGYCDHITVEVNTDNSITVTDNGRGIPTGFNSQ 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L TV R+G + Q
Sbjct: 99 MQKSALEVVMTVLHAGGKFDKDT--YQVSGGLHGVGVSCVNALSTLLRATVHREGKIFQQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G P T + + D+ GT I F PD +FT AI++ + TI+ R+REL++LN
Sbjct: 157 EYKQGDPQTEVEV----IGESDKTGTVIHFVPDATIFT-AIEYKYETISQRLRELSYLNK 211
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLN-TDKKPLHDVVGFRKDVDGITID 237
+LT+ + + K ++ GGL E+V++L+ T + L + + + G+ +
Sbjct: 212 GIRLTMVDHRVKGEDGKALTEDFLSEGGLTEFVRYLDETRQSFLPEPIYVEGEKSGVPVQ 271
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A + + +YS+ + Y N+I TI+GGTHI G + +LTRTL S K ++ + ++G
Sbjct: 272 VAFTY-NHSYSENVYSYVNNINTIEGGTHISGFRRALTRTLKSYADKEGMLEKAKVDVTG 330
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VVD + E L+++LE +P SI+
Sbjct: 331 DDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGVVDNATSEALSKFLEENPKQAKSII 390
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+VL S LPGKLADCS P E+++VEGDSAGGSA
Sbjct: 391 QKVILAAQARHAARKAREMVQRKNVLSGSGLPGKLADCSEKDPGLCELYLVEGDSAGGSA 450
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR QAILPLRGKILNVE+ E +Y NEEI+N+I ALG+ +D K E L
Sbjct: 451 KQGRDRNTQAILPLRGKILNVEKAQEYKIYDNEEIKNIITALGVTFGKDDDDKALNMEKL 510
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HIRTL+LTFF+RY + L + G +Y+ +PP Y V++GK+ Y ++
Sbjct: 511 RYHKIIIMTDADVDGSHIRTLILTFFFRYMRDLIESGYVYIALPPFYLVKKGKKELYAWN 570
Query: 534 DAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
D + +K++ + +++ +QR+KGLGEM P QLWETT+NPE R LKQ+ IE AA A
Sbjct: 571 DDDRDVAIKELAGNGKPESVH-VQRYKGLGEMNPEQLWETTMNPENRSLKQVTIESAAGA 629
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 630 DHLFSMLMGDDVPPRREFIEENAKYANVD 658
>gi|282859419|ref|ZP_06268525.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|424900188|ref|ZP_18323730.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
gi|282587817|gb|EFB93016.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|388592388|gb|EIM32627.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
Length = 656
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/633 (47%), Positives = 426/633 (67%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTINEDNSITVEDNGRGIPVDEHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+R+G Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMMSQVFREGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V ++ GTR +FWPD +FTT + F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETEKTGTRQQFWPDGTIFTTTV-FQWDVVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L DPE + F GL+EYV++++ ++ L +DV+ + + G+ I+
Sbjct: 204 GIKITLIDLRPDPETGKTRTEIFHAKDGLKEYVRYVDRHRQHLFNDVIYLKSEKQGVPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G + +LTRTL + SK ++ I
Sbjct: 264 VAIMYNTD-YTENIHSYVNNINTIEGGTHLQGFRTALTRTLKTYADNDAQISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +ISV+V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP
Sbjct: 323 EITGEDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSAYLEEHPSEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVVLAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK 470
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ + DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEEDSDFEA 502
Query: 471 --EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +++ PPLYK K
Sbjct: 503 NIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLFIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAELKKVKSSFPS---NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
+YCY + + + + + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+
Sbjct: 563 EYCYTEQQRQAFIDKYGAGEEGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIEN 622
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
AA+A+ VFS LMG V+ R+E I+ A N+D
Sbjct: 623 AADADEVFSMLMGDDVEPRREFIEQNATYANID 655
>gi|221195249|ref|ZP_03568305.1| DNA gyrase, B subunit [Atopobium rimae ATCC 49626]
gi|221185152|gb|EEE17543.1| DNA gyrase, B subunit [Atopobium rimae ATCC 49626]
Length = 649
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 312/638 (48%), Positives = 422/638 (66%), Gaps = 33/638 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T GLHHLV+EI+DN+VDEA AG+ + I+V + ADNSVSV DNGRGIP+D+HP
Sbjct: 29 MYIGTTSSAGLHHLVWEIVDNSVDEALAGFCTKIKVTVHADNSVSVEDNGRGIPVDIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE VLT+LHAGGKF +S Y VSGGLHGVG+SVVNALS+ + V RDG Y
Sbjct: 89 KKIPTLEVVLTILHAGGKF--DNSAYKVSGGLHGVGVSVVNALSKRMIAEVKRDGKIYQM 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
++ RGK T + + GT I FWPD +F TT FD T+ R++E AFLN
Sbjct: 147 EFKRGKT----TQKMKEIGKTKSTGTTITFWPDDTIFETTTYNFD--TLRDRLQETAFLN 200
Query: 180 PKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDK-------KPLHDVVGFRKDV 231
L I L E + P + EY +AGG+ ++V++LN +K KP++ + +
Sbjct: 201 KNLKIVLTDERELIP---RVVEYQYAGGIIDFVKYLNDEKTVLTGLSKPIY--IEGSSEP 255
Query: 232 DGIT-----IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSK 286
D T +++A+QW ++ ++D L +AN I T +GG H+EG + +LT+ +N G +
Sbjct: 256 DAPTSQMGEVEVAMQWNTE-FNDRTLSFANDIYTEEGGMHLEGFRTALTKAVNDYGTRQG 314
Query: 287 TVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYL 346
+K+KD L+G+ +REGLT +ISV++P+P+FEGQTK +LG+ +R + ++ V L EYL
Sbjct: 315 ILKEKDPKLTGDDIREGLTAVISVKLPDPQFEGQTKAKLGSSYMRTLTNKIVSSGLAEYL 374
Query: 347 ELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 406
E HP+ IL K+ A K LAA++AR+ R+K +L S+SLPGKLADCS PE +E+F
Sbjct: 375 EEHPNQAKEILKKATQAAKGRLAARKAREATRRKGLLESASLPGKLADCSVKDPEMTELF 434
Query: 407 IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGE 466
IVEGDSAGGSAK RDR QA+LPLRGKILNVER ++ I +LI A+G GV GE
Sbjct: 435 IVEGDSAGGSAKMARDRSIQAVLPLRGKILNVERVQAHRALSSDTITSLITAIGTGV-GE 493
Query: 467 DFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RG 525
+F E RYHKI+I+TDADVDG+HIR LLLTFFYRY K + D G IYV PPLY+++ +G
Sbjct: 494 EFNLEKARYHKIVIMTDADVDGSHIRILLLTFFYRYMKPMIDAGYIYVAQPPLYQIKAKG 553
Query: 526 KQV-QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
K+ +Y Y D EL F ++ Y++QR+KGLGEM P QLW TT+ P+ R+L ++ I+
Sbjct: 554 KKHGKYIYTDEELAVEAKQFEDSSKYTVQRYKGLGEMDPEQLWSTTMEPKNRILLKVTID 613
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
DA A+ + LMG +V+ RK+ IQ A V LDI
Sbjct: 614 DAMAADRAVADLMGNQVEKRKDFIQTHAKDVRF--LDI 649
>gi|408491756|ref|YP_006868125.1| DNA gyrase subunit B GyrB [Psychroflexus torquis ATCC 700755]
gi|408469031|gb|AFU69375.1| DNA gyrase subunit B GyrB [Psychroflexus torquis ATCC 700755]
Length = 646
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/626 (46%), Positives = 425/626 (67%), Gaps = 18/626 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA GY I++ + D SV+ DNGRGIPIDLH
Sbjct: 30 MYIGDVGERGLHHLVYEVVDNSIDEAMGGYCDKIDLVINEDGSVTTLDNGRGIPIDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+SVVNALS L V++DG + Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSVVNALSVKLHARVFKDGKVWEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V P + +GT I F PD ++F +++F + T+A R+REL++LN
Sbjct: 148 EYERGKAIYP----VKPTGDTEHKGTEITFKPDSEIFQESVEFKYETLAKRLRELSYLNK 203
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITI 236
+ I++ R+ + D E Q +E++ GL+E++++++ +++P+ DV+ + + I +
Sbjct: 204 GIRISIIDKRQTNDDGEYRQ-DEFYSEEGLKEFIRFIDQNREPIITDVISMESEKNNIPV 262
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+ + +++YS+ + Y N+I T +GGTH+ G + LT TL S + ++
Sbjct: 263 EVAMVY-NNSYSENLHSYVNNINTHEGGTHLSGFRRGLTATLKKYADNSGLLDKLKFEIT 321
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT I+SV+V NP+FEGQTKT+LGN E+ V Q+V E L YLE +P+ +I
Sbjct: 322 GDDFREGLTAIVSVKVANPQFEGQTKTKLGNRELTSAVSQAVTEMLEIYLEENPNDAKTI 381
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS PE E+F+VEGDSAGG+
Sbjct: 382 VQKVMLAAQARHAAKKAREMVQRKTVMSGGGLPGKLSDCSEQDPEACEVFLVEGDSAGGT 441
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EA 472
AKQGRDR+FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K
Sbjct: 442 AKQGRDRKFQAILPLRGKILNVEKAMQHRVFENEEIKNIYTALGVTIGTEEDSKALNLSK 501
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHK+II+ DADVDG+HI TL+LTFF+RY K L + IY+ PPLY +++G + +Y +
Sbjct: 502 LRYHKVIIMCDADVDGSHIATLILTFFFRYMKELIEASHIYIATPPLYLIKKGSKKRYAW 561
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
++ E ++ + + ++ S+QR+KGLGEM +QLW+TT+NPE R+L+++ I D AEA+ +
Sbjct: 562 NEKERNEIVNEYKTSV--SVQRYKGLGEMNAIQLWDTTMNPENRILRRVTIVDMAEADRI 619
Query: 593 FSSLMGARVDTRKELIQNAANLVNLD 618
FS LMG V R+E I+ A N+D
Sbjct: 620 FSMLMGDEVPPRREFIEQNAVYANID 645
>gi|299820837|ref|ZP_07052726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM
20601]
gi|299817858|gb|EFI85093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM
20601]
Length = 646
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/623 (50%), Positives = 421/623 (67%), Gaps = 18/623 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ S IE+ + DNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCSEIEITIEEDNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +Y+Q
Sbjct: 96 VGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTDLEVYVHRDGQKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G V + D +GT + F PD ++FT FD +T+ R RELAFLN
Sbjct: 154 RFEQGNVVMDMEER----GETDYRGTIVHFKPDPEIFTETTVFDFDTLRTRARELAFLNK 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
L I++ ED E +Y + GG+ YV+ LN K+ +H+ + G R+D I +
Sbjct: 210 NLRISI--EDKREEHQVRKDYHYEGGIRSYVEHLNKSKEVIHEPPIYLEGERED---IMV 264
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++++Q+ + ++ ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LS
Sbjct: 265 EISMQYNT-GFASNLISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLS 323
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT IIS++ PNP+FEGQTKT+LGN E R + D+ E L +++ +PDV I
Sbjct: 324 GEDVREGLTAIISIKHPNPQFEGQTKTKLGNSEARTITDKLFSEALNKFMMENPDVGKKI 383
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A +A +AAKRARD+ R+ S L S+LPGKLADCSS PE SE++IVEGDSAGGS
Sbjct: 384 VEKGVVASRARMAAKRARDVARKTSGLEISNLPGKLADCSSRNPEISELYIVEGDSAGGS 443
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYH
Sbjct: 444 AKQGRDRLFQAILPIRGKILNVEKARLDKILANEEIRTIFTAMGTGFGG-DFNVAKARYH 502
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
K+II+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GK+V+Y Y D +
Sbjct: 503 KLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKEVEYVYTDKQ 562
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L +S S+ Y+IQR+KGLGEM P QLWETT+NPE R L Q+ I DA +A+ F L
Sbjct: 563 LDDYLASIGSDTKYAIQRYKGLGEMNPEQLWETTMNPEHRTLLQVNINDAIDADETFEML 622
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG RV+ R++ I +NA + NLD
Sbjct: 623 MGDRVEPRRKFIEENAQYVKNLD 645
>gi|452951124|gb|EME56574.1| DNA gyrase subunit B [Amycolatopsis decaplanina DSM 44594]
Length = 655
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/639 (47%), Positives = 427/639 (66%), Gaps = 33/639 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV E++DN+VDEA AG+A+ +EV LLAD V V D+GRGIP+D+HP
Sbjct: 28 MYIGSTGERGLHHLVQEVVDNSVDEAMAGFATKVEVTLLADGGVRVVDDGRGIPVDMHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K LE VLTVLHAGGKF S Y+VSGGLHGVG+SVVNALS L V R G + Q
Sbjct: 88 EQKPTLEVVLTVLHAGGKF--DSDSYAVSGGLHGVGVSVVNALSTKLIAEVKRGGHSWRQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+ P + + + GT I FW D +F T ++ TI+ R++E+AFLN
Sbjct: 146 VYTDQVP-----GELEDLGPAEDTGTTITFWADGDIFETTT-YNFETISRRLQEMAFLNK 199
Query: 181 KLTIALRKE---DSDPEKNQYNE--------YFFAGGLEEYVQWLNTDKKPLH-DVVGFR 228
LT++LR E D + E + + Y + GGLE++V+ +N K P+H V+ F
Sbjct: 200 GLTLSLRDERVADEETEADASGQAARVKEKTYCYPGGLEDFVKHINGSKDPIHASVISFE 259
Query: 229 KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 288
G+ +++A+QW ++ ++ ++ +AN+I T +GGTH EG +A+LTR +N+ ++ K +
Sbjct: 260 AKGTGLEVEVAMQW-NNGFTPSVYTFANTINTHEGGTHEEGFRAALTRVVNAYAREKKLL 318
Query: 289 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 348
K+KD +LSG+ VREGL I+S+++ P+FEGQTKT+LGN E + V Q+ E+L ++ E
Sbjct: 319 KEKDANLSGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNSEAKTFVQQTSNEWLADWFER 378
Query: 349 HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 408
+P +I++KS+S+ +A +AA++ARDLVR+K L LPGKL DC ST P E E++IV
Sbjct: 379 NPTEAKTIINKSISSAQARMAARKARDLVRRKGALEIGGLPGKLKDCRSTNPSECELYIV 438
Query: 409 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 468
EGDSAGGSAK+GRD +QAILP+RGKI+NVE+ + KN E+Q+LI ALG G+ E+F
Sbjct: 439 EGDSAGGSAKEGRDSMYQAILPIRGKIINVEKARIDRVLKNTEVQSLITALGTGIH-EEF 497
Query: 469 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ- 527
E LRYHKI+++ DADVDG HI TLLLTF +R+ L + G +++ PPLYK++ +Q
Sbjct: 498 DIEKLRYHKIVLMADADVDGQHITTLLLTFLFRFMPPLIEHGHVFLSRPPLYKIKWPRQD 557
Query: 528 VQYCYDDAELKKVKSS-------FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQ 580
+Y Y D E V + P + +IQR+KGLGEM +LWETT++P R+L Q
Sbjct: 558 PEYAYSDRERDAVIQAGVEAGRKLPKDD--AIQRYKGLGEMNAEELWETTMDPANRLLGQ 615
Query: 581 LVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 618
+ ++DAA+A+ +FS LMG V+ R+ I +NA ++ LD
Sbjct: 616 VTLDDAAQADDLFSVLMGEDVEARRSFITRNAKDVRFLD 654
>gi|433542996|ref|ZP_20499411.1| DNA gyrase subunit B [Brevibacillus agri BAB-2500]
gi|432185670|gb|ELK43156.1| DNA gyrase subunit B [Brevibacillus agri BAB-2500]
Length = 641
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AGY NI V + DNSVSV DNGRGIP +H
Sbjct: 31 MYIGSTSSRGLHHLVWEIVDNAIDEALAGYCDNILVVIHPDNSVSVTDNGRGIPTGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKFGG S LHGVG SVVNALSE +EV V ++ ++
Sbjct: 91 TGKSTVETVLTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEWMEVEVKQNNKIHYM 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++ G P L + + GT++ F PD +FT F+++ + RIRELAFLN
Sbjct: 149 RFTVGTPDADLAV----IGETEETGTKVTFKPDPTIFTETTVFEYDVLQKRIRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L+ D+ P++ + + + GG+ ++V++LN +++PLH+ V+ + DG+ +++A
Sbjct: 205 GLRITLK--DTRPDQEREESFHYEGGIVQFVEYLNKNREPLHEEVIYCEGEKDGLFVEVA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + +AN+I T +GGTH G K +LTR +N +K +K+KD +LSG+
Sbjct: 263 LQY-NDSYVSNIYSFANNINTHEGGTHETGFKTALTRVINDYSRKFNLLKEKDPNLSGDD 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IISV++ P+FEGQTKT+LGN E R + + + + ++E +P V ++ K
Sbjct: 322 VREGITAIISVKIQEPQFEGQTKTKLGNSEARSITESVFGDRFSTFMEENPGVAKKVVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR++ R+KS L S+LPGKLADCSS ESE+FIVEGDSAGGSAK
Sbjct: 382 ALMASRAREAARKAREMTRRKSALEVSALPGKLADCSSKDASESELFIVEGDSAGGSAKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + N EI+ +I ALG GV GEDF RYHK++
Sbjct: 442 GRDRHFQAILPLRGKVLNVEKARLDKILGNNEIRMIITALGTGV-GEDFDISKARYHKVV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L + G IY+ PPLY +++GK + Y Y+D + +
Sbjct: 501 IMTDADVDGSHIRTLLLTFFYRYMRQLIEAGYIYIAQPPLYSIKQGKTLHYAYNDKQRDE 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++ + S+QR+KGLGEM QLWETT++P R L Q+ +EDA EA++VF +LMG
Sbjct: 561 ILATLKATPKPSVQRYKGLGEMNADQLWETTMDPAMRTLLQVNLEDAMEADMVFETLMGD 620
Query: 600 RVDTRKELI-QNAANLVNLD 618
V+ R+E I Q+AA++ +LD
Sbjct: 621 EVEPRREFIEQHAASVRDLD 640
>gi|257388769|ref|YP_003178542.1| DNA gyrase subunit beta [Halomicrobium mukohataei DSM 12286]
gi|257171076|gb|ACV48835.1| DNA gyrase, B subunit [Halomicrobium mukohataei DSM 12286]
Length = 641
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 307/615 (49%), Positives = 431/615 (70%), Gaps = 17/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ I V + D+SVSV+D+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVTIHEDDSVSVSDDGRGIPVDTHEK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q
Sbjct: 87 HDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSKWLEVEVKRDGAVWKQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P L V ++ + GT+IRFWPD ++F A F ++T+A R+RELAFLN
Sbjct: 145 RFDHGEPEDELE-RVRDMEPDEETGTQIRFWPDDEIFE-ATDFVYSTLASRLRELAFLNS 202
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDV---DG-I 234
+ I+L E D D E + + GG++E+VQ+LN K+PLH DV+ F + DG +
Sbjct: 203 GVEISLVDERDGDSET-----FVYEGGIKEFVQYLNETKEPLHRDVIYFEDEEQIEDGPV 257
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+Q ++ ++ +AN+I T +GG+H+ G K +LTRT+N + + D D +
Sbjct: 258 QVEIAMQGTAELQG-SIHAFANNINTREGGSHMTGFKTALTRTVNDYATSNGLLNDLDDT 316
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
LSGE +REGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD +
Sbjct: 317 LSGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLGTFFEENPDTAE 376
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K++ A KA AAK+A +L R+KS L S++LPGKL+DC + P+++E+F+VEGDSAG
Sbjct: 377 AIVGKAVEAAKARKAAKKAEELTRRKSALESTALPGKLSDCQTRDPDDAELFVVEGDSAG 436
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAKQGR+ FQAILP+RGKILNVER + +N+ I+N+I ALG G+ G++F E +R
Sbjct: 437 GSAKQGRNPEFQAILPIRGKILNVERHRLDRILENDSIRNVITALGTGI-GDEFDVEDIR 495
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
Y +II++TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY+V + +
Sbjct: 496 YKRIIMMTDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYAAQPPLYRVRYNGETYDAMTE 555
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
AE ++ +QRFKGLGEM P QLW+TT++P+QR+LKQ+ IEDAA A+ +FS
Sbjct: 556 AERDRLVEEKCGGDPDQVQRFKGLGEMNPQQLWDTTMDPDQRILKQITIEDAAAADKMFS 615
Query: 595 SLMGARVDTRKELIQ 609
LMG V+ RKE I+
Sbjct: 616 VLMGDAVEPRKEFIK 630
>gi|340350611|ref|ZP_08673590.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|445114741|ref|ZP_21378019.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
gi|339607607|gb|EGQ12539.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|444840613|gb|ELX67641.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
Length = 656
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/633 (48%), Positives = 422/633 (66%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY S+IEV + DNSV+V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINEDNSVTVEDDGRGIPVDEHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+R+G Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRNGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD +FTT I F + +A R+RELAFLN
Sbjct: 149 EYEQGKPLYPVKV----VGETDKTGTRQQFWPDGSIFTTTI-FQWDIVARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIKITLTDLRPNTEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ I
Sbjct: 264 AIMYNTD-YNENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDPQIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P
Sbjct: 323 ITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPAEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 LICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK-- 469
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGESDFEAN 502
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
E LRY KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +
Sbjct: 503 TEKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTYKKVSE 562
Query: 530 YCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
YCY + + L K N QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+
Sbjct: 563 YCYTEQQRLQFLDKYAGGDEENKAVHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIEN 622
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A+ A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 ASTADEMFSMLMGDDVEPRREFIEQNATYANID 655
>gi|289433379|ref|YP_003463251.1| DNA gyrase subunit B [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169623|emb|CBH26157.1| DNA gyrase, B subunit [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 646
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 314/620 (50%), Positives = 421/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AG+ + IE+ + ADNS++V DNGRGIP ++
Sbjct: 36 MYIGSTSQRGLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEK 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ +E + TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G +Y+Q
Sbjct: 96 IGRPTVEVIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTYLEVYVHREGKKYYQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG V + D +GT + F PD Q+F+ +FD +T+ R RELAFLN
Sbjct: 154 RFERGDVVMDMEEQ----GETDYRGTIVHFTPDPQIFSETTEFDFDTLRTRTRELAFLNR 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
LTI++ ED E ++ + GG+ YV+ LN K +H+ + + D I ++++
Sbjct: 210 GLTISI--EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEIS 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + +S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE
Sbjct: 268 MQYNT-GFSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKVFKDSDDNLSGED 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K
Sbjct: 327 VREGLTAIISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQ
Sbjct: 387 GVVASRARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQ 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+I
Sbjct: 447 GRDRLFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLI 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLED 565
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+S + Y IQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG
Sbjct: 566 YLASLDKDTKYGIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGD 625
Query: 600 RVDTRKELI-QNAANLVNLD 618
RV+ R++ I +NA + NLD
Sbjct: 626 RVEPRRKFIEENAQYVKNLD 645
>gi|300774234|ref|ZP_07084101.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
gi|300758913|gb|EFK55742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
Length = 652
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/632 (48%), Positives = 434/632 (68%), Gaps = 25/632 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG +GLHHLVYE++DN++DEA AGY ++I V + NS+SV DNGRGIP ++
Sbjct: 31 MYIGDTGVKGLHHLVYEVVDNSIDEAVAGYCNDILVTIHEGNSISVQDNGRGIPTGINKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L V RDG + Q
Sbjct: 91 ENKSALELVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTLLIAEVHRDGQIFKQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP V + +R GT + F+PD ++FT ++++T++ R+RELAFLN
Sbjct: 149 EYEKGKP----KYDVKAIGESERTGTTVTFFPDPEIFTMTTVYNYDTLSNRLRELAFLNK 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGI 234
+LTI +E D + + +F GGL+E+V++L+ +++ L V G ++ G+
Sbjct: 205 GIRLTIVDEREILDDGSFRKDVFFSEGGLQEFVKFLDGNRQSLISNPIYVEGIKQ---GV 261
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
++LALQ+ +D YS+ + Y N+I TI+GG+H+ G + LTRTL + S +K+ +
Sbjct: 262 PVELALQY-NDTYSENVHSYVNNINTIEGGSHVAGFRRGLTRTLKKYAEDSGLLKNLKVE 320
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++G+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L+ YLE +P
Sbjct: 321 IAGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDVAVGEILSTYLEENPREAK 380
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ K + A +A AA++AR++V++K+V+ S LPGKLADCS P + EIF VEGDSAG
Sbjct: 381 MIVQKVVIAAQARAAARKAREMVQRKTVMGGSGLPGKLADCSDNDPHKCEIFFVEGDSAG 440
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK---- 470
G+AKQGRDR+FQAI+PLRGKILNVE+ E +Y+NEEI+N+ ALG+ V D K
Sbjct: 441 GTAKQGRDRKFQAIMPLRGKILNVEKAMEHKIYENEEIKNMFTALGVSVGTADDAKALNL 500
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
E LRYHKI+I+TDADVDG+HI TL+LTF++RY K L + G +Y+ PPLY V++GK+ +Y
Sbjct: 501 EKLRYHKIVIMTDADVDGSHIATLILTFYFRYMKELIENGYVYIATPPLYLVKKGKESEY 560
Query: 531 CYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
+ + + ++++K + ++++ +QR+KGLGEM QLW+TT+NPE R L+Q+ I++A
Sbjct: 561 AWTEEQRLQAIQRLKGAGKEDSVH-VQRYKGLGEMNAEQLWDTTMNPEHRTLRQVTIDNA 619
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
AE + +FS LMG V R+E I+ A +D
Sbjct: 620 AECDRIFSMLMGDEVAPRREFIEKNARYAKID 651
>gi|399048558|ref|ZP_10740043.1| DNA gyrase, B subunit [Brevibacillus sp. CF112]
gi|398053620|gb|EJL45794.1| DNA gyrase, B subunit [Brevibacillus sp. CF112]
Length = 641
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 429/620 (69%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DNA+DEA AGY NI V + DNSVSV DNGRGIP +H
Sbjct: 31 MYIGSTSSRGLHHLVWEIVDNAIDEALAGYCDNILVVIHPDNSVSVTDNGRGIPTGIHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS +ETVLTVLHAGGKFGG S LHGVG SVVNALSE +EV V ++ ++
Sbjct: 91 TGKSTVETVLTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEWMEVEVKQNNKIHYM 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++ G P L + + GT++ F PD +FT F+++ + RIRELAFLN
Sbjct: 149 RFTVGTPDADLAV----IGETEETGTKVTFKPDPTIFTETTVFEYDVLQKRIRELAFLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L+ D+ P++ + + + GG+ ++V++LN +++PLH+ V+ + DG+ +++A
Sbjct: 205 GLRITLK--DTRPDQEREESFHYEGGIVQFVEYLNKNREPLHEEVIYCEGEKDGLFVEVA 262
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+Y + +AN+I T +GGTH G K +LTR +N +K +K+KD +LSG+
Sbjct: 263 LQY-NDSYVSNIYSFANNINTHEGGTHETGFKTALTRVINDYSRKFNLLKEKDPNLSGDD 321
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T IISV++ P+FEGQTKT+LGN E R + + + + ++E +P V ++ K
Sbjct: 322 VREGITAIISVKIQEPQFEGQTKTKLGNSEARSITESVFGDRFSTFMEENPGVAKKVVEK 381
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR++ R+KS L S+LPGKLADCSS ESE+FIVEGDSAGGSAK
Sbjct: 382 ALMASRAREAARKAREMTRRKSALEVSALPGKLADCSSKDASESELFIVEGDSAGGSAKS 441
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + N EI+ +I ALG GV GEDF RYHK++
Sbjct: 442 GRDRHFQAILPLRGKVLNVEKARLDKILGNNEIRMIITALGTGV-GEDFDITKARYHKVV 500
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLLLTFFYRY + L + G IY+ PPLY +++GK + Y Y+D + +
Sbjct: 501 IMTDADVDGSHIRTLLLTFFYRYMRQLIEAGYIYIAQPPLYSIKQGKTLHYAYNDKQRDE 560
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++ + S+QR+KGLGEM QLWETT++P R L Q+ +EDA EA++VF +LMG
Sbjct: 561 ILATLKATPKPSVQRYKGLGEMNADQLWETTMDPAMRTLLQVNLEDAMEADMVFETLMGD 620
Query: 600 RVDTRKELI-QNAANLVNLD 618
V+ R+E I Q+AA++ +LD
Sbjct: 621 EVEPRREFIEQHAASVRDLD 640
>gi|332881729|ref|ZP_08449377.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357044627|ref|ZP_09106276.1| DNA gyrase, B subunit [Paraprevotella clara YIT 11840]
gi|332680368|gb|EGJ53317.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355532434|gb|EHH01818.1| DNA gyrase, B subunit [Paraprevotella clara YIT 11840]
Length = 655
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/635 (47%), Positives = 422/635 (66%), Gaps = 28/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE +DN++DEA AGY ++IEV + DNS++V DNGRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLVYETVDNSIDEALAGYCTHIEVTINEDNSITVQDNGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 91 EHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFREGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ + V + +GTR +FWPD +F T + + +A R+RELAFLN
Sbjct: 149 EYECGKPLYPVKV----VGETELRGTRQQFWPDGSIFITTT-YKYEILANRMRELAFLNA 203
Query: 181 KLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
+TI L + E+ P ++ GL+E+V+++++ + L +DV+ + G+
Sbjct: 204 GITITLTDMREKDENGVPRSETFHS---KDGLKEFVRYIDSSRIHLFNDVIYLNTEKQGV 260
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-----NSLGKKSKTVK 289
I++A+ + ++ Y++ + Y N+I TI+GGTH+ G + +LTRTL + K+ + ++
Sbjct: 261 PIEVAIMY-NNGYTENIHSYVNNINTIEGGTHLAGFRTALTRTLKKYAEDEYAKELEKLE 319
Query: 290 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 349
+ +SGE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE H
Sbjct: 320 KNKVEISGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSYYLEEH 379
Query: 350 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 409
P I+ K + A A +AA++AR+ V++KS + +PGKLADCS E+FIVE
Sbjct: 380 PKEAKLIVDKVILAATARVAARKARESVQRKSPMSGGGMPGKLADCSDKDAANCELFIVE 439
Query: 410 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK-GEDF 468
GDSAGGSAKQGR R++QAILP+RGKI NVER +++EE+ N+I+ALG+ GED
Sbjct: 440 GDSAGGSAKQGRSRQYQAILPIRGKIFNVERVMWHKAFEHEEVNNIIQALGVRFGLGEDS 499
Query: 469 KK---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 525
K+ E LRY+K+II+TDADVDG+HI TLL+T FYRY L +G +Y+ PPLY+ ++G
Sbjct: 500 KEANYEKLRYYKVIIMTDADVDGSHIDTLLMTLFYRYMPELIQKGHLYIATPPLYRCKKG 559
Query: 526 KQVQYCYDDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
K +YCY +A+ + + S + QR+KGLGEM P QLWETT+NPE R+LKQ+ I
Sbjct: 560 KIEEYCYTEADRLRFMQQYNNGSEQGMTTQRYKGLGEMNPEQLWETTMNPETRLLKQVTI 619
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
EDAA A+ VFS LMG V R+E I+ A N+D
Sbjct: 620 EDAAGADYVFSMLMGEDVGPRREFIEQNATYANID 654
>gi|150014898|ref|YP_001307152.1| DNA gyrase subunit B [Clostridium beijerinckii NCIMB 8052]
gi|149901363|gb|ABR32196.1| DNA gyrase, B subunit [Clostridium beijerinckii NCIMB 8052]
Length = 635
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 321/621 (51%), Positives = 435/621 (70%), Gaps = 17/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY + IEV + DNS++V D+GRG+P+ +HP
Sbjct: 28 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCNKIEVYINEDNSITVNDDGRGMPVGIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KS +E ++T+LHAGGKFGG S LHGVG SVVNALSE VTV RDG + Q
Sbjct: 88 MGKSTVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEECTVTVNRDGHIWQQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KYS+GK + LT V D+ GT+ F PD ++F I FD ++ R+RELAFLN
Sbjct: 146 KYSKGKVLNELT----KVGDSDQTGTQTYFKPDAEIFD-EIVFDFEILSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
+ I L D EK + + + GG++ +V +LN +K PLH+ + + V D I++++A
Sbjct: 201 GIYIRLV--DKRDEKEEV--FHYEGGIKSFVSYLNRNKVPLHEEPIYIEGVKDNISVEVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+
Sbjct: 257 LQY-NDGYTENIFSFANNIDTVEGGTHLVGFKTALTRVFNDYAKKFGHIKENDKNFTGDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +IS+++ P+FEGQTKT+LGN EVR +VD V E + +LE +P++ I+ K
Sbjct: 316 IREGLTGVISIKIEEPQFEGQTKTKLGNSEVRGIVDSIVGENIGIFLEENPNIGKMIVDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A +A AA++AR+L R KSVL S+LPGKLADCSS P E EI+IVEGDSAGGSAKQ
Sbjct: 376 ALMAARARDAARKARELTR-KSVLERSTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R+FQAILPLRGKILNVE++ + + I+++I A G G+ G DF E +RY++II
Sbjct: 435 GRNRKFQAILPLRGKILNVEKQRLDRILNADTIRSMITAFGAGI-GNDFDVEKIRYNRII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L D+G +Y+ PPLYKV + K+ Y Y D EL+
Sbjct: 494 IMTDADVDGAHIRTLLLTFFYRYMRNLIDDGHVYIAQPPLYKVSKSKKEYYAYSDPELES 553
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V S + IQR+KGLGEM QLW+TT++PE+R+L ++ IEDA A+ +F+ LMG
Sbjct: 554 VLSELGGKDNSTDIQRYKGLGEMNASQLWDTTMDPEKRILLKVNIEDAMAADEIFTILMG 613
Query: 599 ARVDTRKELI-QNAANLVNLD 618
+V+ RKE I QNA N+VNLD
Sbjct: 614 EKVEPRKEFIQQNARNVVNLD 634
>gi|281424989|ref|ZP_06255902.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|299142183|ref|ZP_07035316.1| DNA gyrase, B subunit [Prevotella oris C735]
gi|281400833|gb|EFB31664.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|298576272|gb|EFI48145.1| DNA gyrase, B subunit [Prevotella oris C735]
Length = 656
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/634 (47%), Positives = 425/634 (67%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY +++E+ L D SV+V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVEITLNEDGSVTVEDNGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V ++GTR +FWPD VFTT + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTVFTTTT-YKWDIVASRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLTDLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKAYADAEPTIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++KSV+ LPGKLADCS+ P+E EIF+VEGDSAG
Sbjct: 383 KICEKVVLAATARIAARKARESVQRKSVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCTYKKASE 562
Query: 530 YCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
YCY + + K V+ +L++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I+
Sbjct: 563 YCYTEQQRQAFIDKYVEGKEDDKSLHT-QRYKGLGEMNPEQLWETTMDPKSRLLKQVTIQ 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 NAAEADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|340347373|ref|ZP_08670482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433651140|ref|YP_007277519.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
gi|339609465|gb|EGQ14337.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433301673|gb|AGB27489.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
Length = 657
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/634 (48%), Positives = 421/634 (66%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AG+ +IEV L D S +V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGFCQDIEVTLNEDGSCTVQDDGRGIPVDEHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + + DR+GTR +FWPD +FTT F + +A R+RELAFLN
Sbjct: 149 EYEKGKPLYPVKV----IGETDRRGTRQQFWPDAGIFTTTT-FQWDIVARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + G+ I++
Sbjct: 204 GIRITLTDLRPNDEGKTRREVFHAKDGLKEFVRYIDRHRTHLFDDVIYLKTEKQGLPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR L + SK ++ I
Sbjct: 264 AIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRMALTRVLKNYADNDAQISKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP
Sbjct: 323 VAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTNYLEEHPVEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++KSV+ LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 QICEKVILAATARVAARKARESVQRKSVMSGGGLPGKLADCSNKDPKQCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T F+R+ + +EG +Y+ PPLYK +GK
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFFRFMPKVIEEGHLYIATPPLYKCTYKGKVS 562
Query: 529 QYCYDD----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY+D A L K QR+KGLGEM P QLWETT++P QR+LKQ+ IE
Sbjct: 563 EYCYNDQQRQAFLDKYAGGVDDGKSIHTQRYKGLGEMNPEQLWETTMDPGQRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAAQADEIFSMLMGDDVEPRREFIEENAAYANID 656
>gi|448391972|ref|ZP_21567067.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
gi|445665384|gb|ELZ18062.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
Length = 644
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/616 (49%), Positives = 422/616 (68%), Gaps = 10/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ +I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDITVSINDDGSVSVADDGRGIPVDTHDE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG +
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGSVFRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G+PV + V ++ + GT+IRFWPD +F +F +T++ R+RELAFLN
Sbjct: 145 AFEEGEPVGDME-RVRDMEEDEETGTQIRFWPDTGIFE-GDEFSFSTLSNRLRELAFLNS 202
Query: 181 KLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+ I L R E D + Y + GG+ E+V++LN + +HD V+ F + I +
Sbjct: 203 GVRITLSDERTELHDEDAPVEETYEYQGGIREFVEYLNETRSAMHDDVIYFEAEEQNIQV 262
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N K + + D + +L
Sbjct: 263 EVAMQ-ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAKDNDMLGDLEDNLK 321
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ S+ E L Y E HPD +I
Sbjct: 322 GEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESSMHEGLGTYFEEHPDTAQAI 381
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K++ A KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGS
Sbjct: 382 VTKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGS 441
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY
Sbjct: 442 AKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYK 500
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + + E
Sbjct: 501 KIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEQE 560
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ + +QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS L
Sbjct: 561 RDEIVAEKCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVL 620
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I++ A
Sbjct: 621 MGDAVEPRKQFIKDNA 636
>gi|227538317|ref|ZP_03968366.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241832|gb|EEI91847.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300]
Length = 652
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/629 (48%), Positives = 431/629 (68%), Gaps = 19/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG +GLHHLVYE++DN++DEA AGY +I V + NS+SV DNGRGIP ++
Sbjct: 31 MYIGDTGVKGLHHLVYEVVDNSIDEAVAGYCDDILVTIHEGNSISVQDNGRGIPTGINKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L V RDG + Q
Sbjct: 91 ENKSALELVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTLLIAEVHRDGQIFKQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP V + +R GT + F+PD ++FT ++++T++ R+RELAFLN
Sbjct: 149 EYEKGKP----KYDVKAIGESERTGTTVTFFPDPEIFTMTTVYNYDTLSNRLRELAFLNK 204
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+LTI +E D + + +F GGL+E+V++L+ +++ L D + G+ ++
Sbjct: 205 GIRLTIVDEREILDDGSFRKDVFFSEGGLQEFVKFLDGNRQSLIPDPIYVEGIKQGVPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
LALQ+ +D YS+ + Y N+I TI+GG+H+ G + LTRTL + S +K+ + ++G
Sbjct: 265 LALQY-NDTYSENVHSYVNNINTIEGGSHVAGFRRGLTRTLKKYAEDSGLLKNLKVEIAG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L+ YLE +P I+
Sbjct: 324 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDVAVGEILSTYLEENPREAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+V+ S LPGKLADCS P + EIF VEGDSAGG+A
Sbjct: 384 QKVVIAAQARAAARKAREMVQRKTVMGGSGLPGKLADCSDNDPHKCEIFFVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR+FQAI+PLRGKILNVE+ E +Y+NEEI+N+ ALG+ V D K E L
Sbjct: 444 KQGRDRKFQAIMPLRGKILNVEKAMEHKIYENEEIKNMFTALGVSVGTPDDAKALNLEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+TDADVDG+HI TL+LTF++RY K L + G +Y+ PPLY V++GK+ QY +
Sbjct: 504 RYHKIVIMTDADVDGSHIATLILTFYFRYMKELIENGYVYIATPPLYLVKKGKESQYAWT 563
Query: 534 DAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+ + ++++K + ++++ +QR+KGLGEM QLW+TT+NPE R L+Q+ I++AAE
Sbjct: 564 EDQRLQAIQRLKGAGKEDSVH-VQRYKGLGEMNAEQLWDTTMNPEHRTLRQVTIDNAAEC 622
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A +D
Sbjct: 623 DRIFSMLMGDEVAPRREFIEKNARYAKID 651
>gi|145577995|gb|ABP82716.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar oswaldocruzi]
Length = 631
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 314/622 (50%), Positives = 426/622 (68%), Gaps = 18/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVE DSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVE-DSAGGSA 430
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 431 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 489
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 490 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 549
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 550 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 609
Query: 598 GARVDTRKELIQ-NAANLVNLD 618
G +V+ R+ IQ NA + NLD
Sbjct: 610 GDKVEPRRNFIQENAKYVKNLD 631
>gi|414074131|ref|YP_006999348.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
gi|413974051|gb|AFW91515.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
Length = 651
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 432/625 (69%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS +L+VTV +DG +Y Q
Sbjct: 95 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTTLDVTVHKDGQKYFQ 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG L + D +GT + F PD ++FT ++FD + +A R+RELAFLN
Sbjct: 153 EYHRGLVRDDLKI----IGETDLRGTTVHFVPDPEIFTETVEFDFDKLATRVRELAFLNR 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I+L + EKN+ + + + GG++ YV++LN +K + + F + ++DGI +++A
Sbjct: 209 GLRISLTDKREGNEKNEVH-FHYEGGIQSYVEYLNENKTVIFEPAIFTEGEMDGIAVEVA 267
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH +G + +LTR +N+ K++K +K+ +L+G+
Sbjct: 268 MQY-TDTYHSVVMSFANNINTHEGGTHEQGFRTALTRVINNYAKQNKILKENGDNLTGDD 326
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++ E LT ++ +P V I+ K
Sbjct: 327 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFAEALTTFMLENPQVARKIVEK 386
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS PE++E+FIVEGDSAGGSAK
Sbjct: 387 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNNPEQTELFIVEGDSAGGSAKS 446
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G D+ RYHK++
Sbjct: 447 GRNREFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGG-DYDLSKARYHKLV 505
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE--- 536
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PP+Y ++ G + + E
Sbjct: 506 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSETKEYIQPGENQE 565
Query: 537 --LKKVKSSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
L++ + + ++QR+KGLGEM QLWETT++PE R++ ++ +EDAAEA+ +F
Sbjct: 566 KDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWETTMDPEHRLMARVSVEDAAEADKIF 625
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+N A +D
Sbjct: 626 DMLMGDRVEPRREFIENNAQYSTID 650
>gi|254495273|ref|ZP_05108197.1| DNA gyrase subunit B [Polaribacter sp. MED152]
gi|85819627|gb|EAQ40784.1| DNA gyrase subunit B [Polaribacter sp. MED152]
Length = 645
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/628 (46%), Positives = 422/628 (67%), Gaps = 22/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA GY IEV + DNS++ DNGRGIP+ LH
Sbjct: 29 MYIGDVGIRGLHHLVYEVVDNSIDEAMGGYCDTIEVTINEDNSITTKDNGRGIPVGLHKK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV ++G + Q
Sbjct: 89 EGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLTATVHKEGKIWQQ 146
Query: 121 KYSRGK---PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+Y RGK PV T + D GT + F PDK +FT + ++++ T+A R+RELA+
Sbjct: 147 EYERGKTLYPVKT-------IGDTDFTGTIVTFLPDKSIFTQSTEYNYETLATRMRELAY 199
Query: 178 LNPKLTIALR-KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
LN +TI L K + D E N +E F + GL E++++L++ ++ L +V+ + +GI
Sbjct: 200 LNKGITITLTDKRNKDDEGNFISETFHSNKGLPEFIEYLDSTREQLIANVISMEGEKNGI 259
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL +S +K+
Sbjct: 260 PVEVAMVYNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTGTLKKYADESGLLKNVKFD 318
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++G+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE +P+
Sbjct: 319 IAGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLTDYLEENPNDAK 378
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K + A A AA++ARD+V++KSV+ LPGKL+DCS T P + EIF+VEGDSAG
Sbjct: 379 TIVQKVILAATARHAARKARDMVQRKSVMSIGGLPGKLSDCSETDPAQCEIFLVEGDSAG 438
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKK 470
G+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+
Sbjct: 439 GTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNMFTALGVSIGTEEDPRALNL 498
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
+RYHK++I+ DADVDG+HI TL+LTFF+RY K + ++G IY+ PPLY V++G++ QY
Sbjct: 499 SKIRYHKVVIMCDADVDGSHIATLILTFFFRYMKEMVEQGYIYIATPPLYLVKKGQKRQY 558
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+DD + + + +IQR+KGLGEM QLW+TT+NPE R L+++VI+ EA+
Sbjct: 559 AWDDDQRDLIAQQMGGSV--TIQRYKGLGEMNAEQLWDTTMNPEFRTLRKVVIDSPTEAD 616
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
VFS LMG V R++ I+ A N+D
Sbjct: 617 RVFSMLMGDEVPPRRDFIERNAKYANID 644
>gi|294674979|ref|YP_003575595.1| DNA gyrase subunit B [Prevotella ruminicola 23]
gi|294471706|gb|ADE81095.1| DNA gyrase, B subunit [Prevotella ruminicola 23]
Length = 658
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 308/635 (48%), Positives = 423/635 (66%), Gaps = 26/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLV E +DN++DEA AGY ++IEV + DNS++V DNGRGIP+D H
Sbjct: 32 MYIGDISEKGLHHLVNETVDNSIDEAMAGYCTHIEVTINEDNSITVQDNGRGIPVDEHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 92 MHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVFRNGHIYQQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD +FTT ++ ++ IA R+RELA+LN
Sbjct: 150 EYEKGKPLYDVKI----VGDTDKTGTRQQFWPDGSIFTTT-EYKYDIIAKRMRELAYLNA 204
Query: 181 KLTIALRKEDSDPEKN-QYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L D E N + E F A GL+E+V++++ + + D + + + DG+ I+
Sbjct: 205 GITITLTDLRPDEEGNLRQPEVFHAKEGLKEFVRYVDRHRTSIIGDPICLKTEKDGVPIE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS----KTVKDKDI 293
+AL + SD YS+ + Y N+I TI+GGTH+ G + +L RTL + K ++ I
Sbjct: 265 VALLYNSD-YSENIHSYVNNINTIEGGTHLTGFRIALARTLKKYADEDDQLRKQIEKAKI 323
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++ + REGLT IISV+V P+FEGQTKT+LGN EV V ++V E +T YLE +P
Sbjct: 324 EVAQDDFREGLTAIISVKVAEPQFEGQTKTKLGNSEVNGAVQKAVGEAMTNYLEENPKEA 383
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
+I K + A A +AA++AR+ V++K+ + LPGKLADCS+ P+E EIF+VEGDSA
Sbjct: 384 HTICEKVILAATARIAARKARESVQRKNPMTGGGLPGKLADCSNKDPKECEIFLVEGDSA 443
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK- 470
GGSAKQGRDR FQAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED K
Sbjct: 444 GGSAKQGRDRHFQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDSKDA 503
Query: 471 --EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + G +Y+ PPLYK K
Sbjct: 504 NIDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPQVIQGGHLYIATPPLYKCTYKKTS 563
Query: 529 QYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
+YCY + + K V + L++ QR+KGLGEM P QLWETT+NPE R+LKQ+ I
Sbjct: 564 EYCYTEQQRQAFIDKYVAGNGDDKGLHT-QRYKGLGEMNPEQLWETTMNPENRLLKQVTI 622
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 ENAAEADEIFSMLMGDDVEPRREFIEKNATYANID 657
>gi|323141431|ref|ZP_08076321.1| DNA gyrase, B subunit [Phascolarctobacterium succinatutens YIT
12067]
gi|322414087|gb|EFY04916.1| DNA gyrase, B subunit [Phascolarctobacterium succinatutens YIT
12067]
Length = 646
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 305/625 (48%), Positives = 432/625 (69%), Gaps = 23/625 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY S+I+V + DNS++V DNGRGIP+D+
Sbjct: 37 MYIGSTSSRGLHHLVYEVVDNSIDEALAGYCSDIKVIIHKDNSITVIDNGRGIPVDMMKK 96
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++TVLHAGGKFG GY VSGGLHGVG++ VNALSE +EV V R G Y
Sbjct: 97 EQKPAVEVIMTVLHAGGKFG--DGGYKVSGGLHGVGVTCVNALSEHMEVEVRRGGKCYGI 154
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++++GK L + GT + F PD +FT ++ ++T+ RIRELAFLN
Sbjct: 155 EFAKGKTSKKL----YEKGDCETTGTTVHFKPDATIFTET-EYSYDTLRLRIRELAFLNK 209
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGIT 235
+TI+L E ++ + ++ FAGG+ EYV++++ DK KP++ + + +
Sbjct: 210 GITISLTDERAEDKSETFH---FAGGIIEYVEFMDKDKDKINPKPIY----LEGEKNAVI 262
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+Q+C D YS+ + Y N+I T +GGTH+ G + +LTRT+N+ +K+ +K+ + +L
Sbjct: 263 VEVAMQYC-DTYSENIFTYVNNINTEEGGTHLSGFRKALTRTINAYARKTNMLKENEDAL 321
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
SG+ VREGLT ++S++V NP+FE QTK +LGN EV +VD V + L E++E +P V
Sbjct: 322 SGDDVREGLTAVLSLKVQNPQFESQTKIKLGNSEVMPIVDNLVGDTLAEFMEENPQVAKK 381
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
++ K++ A +A LAA++AR+L R+K+ + LPGKLADC S E++EI++VEGDSAGG
Sbjct: 382 LVEKAIVAARARLAARKARELTRRKNAMDLGGLPGKLADCKSRNVEDTEIYLVEGDSAGG 441
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGR+ FQAILPLRGKILNVE+ + +EEI+N+I A G G+ G+DF E RY
Sbjct: 442 SAKQGRNSDFQAILPLRGKILNVEKARLDKVLSSEEIRNMITAFGCGI-GDDFNLEKARY 500
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDD 534
KIII+TDADVDGAHIRTLLLTFFYRY + L EG +++ PPLY + + KQ Y Y D
Sbjct: 501 GKIIIMTDADVDGAHIRTLLLTFFYRYMQPLIKEGHVFIAQPPLYLIRKNQKQHYYAYSD 560
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL+++ +A +QR+KGLGEM P QLWETT++P R + Q+ +EDAAEA+ +FS
Sbjct: 561 EELQEILDEVGRDANPYVQRYKGLGEMNPGQLWETTMDPAARTILQVHLEDAAEADRIFS 620
Query: 595 SLMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R++ I+ NA + NLD
Sbjct: 621 ILMGDKVEPRRQFIEDNAKKVRNLD 645
>gi|354611445|ref|ZP_09029401.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
gi|353196265|gb|EHB61767.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
Length = 637
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 310/614 (50%), Positives = 424/614 (69%), Gaps = 13/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +IEV L D SVSV D+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDHIEVTLHEDGSVSVEDDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V V RDG +Y +
Sbjct: 87 YDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVVNALSERLAVEVERDGGKYRE 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG+PVT L + D GT IRF PD ++F T + FD++T+ R+RELAFLN
Sbjct: 145 KFERGEPVTDLE----RLGDSDDTGTLIRFRPDSEIFET-LDFDYSTLETRLRELAFLNS 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D + + + + + GG+ E+V++LN + LHD V+ F + DGI +++A
Sbjct: 200 GVEITLTDERGD--EVESSTFKYDGGIREFVEYLNESRDALHDDVIYFEDEDDGIQVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q D S T +AN+I T +GGTH+ G K +LTR +N ++ + + D +L GE
Sbjct: 258 MQASDDLQSSTH-AFANNINTREGGTHLTGFKTALTRVVNDYANENDLLGELDGENLKGE 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT +ISV+ P+P+FEGQTKT+LGN +VR +V+ V E + Y E +PD +++
Sbjct: 317 DIREGLTAVISVKHPDPQFEGQTKTKLGNSDVRGIVEGVVHEGIGTYFEENPDTARAVVL 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A KA AAK+A +L R+KS L S+SLPGKLADC + P+++E+FIVEGDSAGGSAK
Sbjct: 377 KAVEAAKARKAAKKAEELTRRKSALSSTSLPGKLADCQTKDPDDAELFIVEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ FQAILPL GKILNVE+ + ++EE++++I ALG G+ G++F E LRY I
Sbjct: 437 QGRNPEFQAILPLGGKILNVEKHRLDRILEHEELRHIITALGTGI-GDEFDIENLRYKNI 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
+++TDADVDGAHIRTLLLTFFYR+ K L + G +Y PPLY++ + +A+ +
Sbjct: 496 VMMTDADVDGAHIRTLLLTFFYRHMKPLLEGGFVYAAQPPLYRIRYRGETYDAMTEADRE 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ +QRFKGLGEM P QLW+TT++PE R+LK++ +EDAA A+ +FS LMG
Sbjct: 556 RIVEEKCDGNPTQVQRFKGLGEMNPQQLWDTTMDPEHRILKRITVEDAAAADKMFSVLMG 615
Query: 599 ARVDTRKELIQNAA 612
V+ RK IQ A
Sbjct: 616 DAVEPRKRFIQENA 629
>gi|6006289|dbj|BAA84773.1| DNA gyrase B subunit [Bacteroides fragilis]
Length = 653
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/629 (47%), Positives = 422/629 (67%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYEI+DN++DEA AGY +IEV + DNS++V DNGRGIP+D H
Sbjct: 33 MYIGDISVKGLHHLVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE +TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 93 EQKSALEVAMTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V V D GT+ +FWPD +FT I +D+ +A R+RELA+LN
Sbjct: 151 EYEIGKPLYP----VKEVGIADHTGTKQQFWPDDSIFTETI-YDYKILASRLRELAYLNA 205
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
L I+L R+ ++ ++ ++ GL E+V+++ + ++ L +DV+ + I I+
Sbjct: 206 GLRISLTDRRVVNEDGSFKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG
Sbjct: 266 VAIMYNT-GFSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD-QSVQEYLTEYLELHPDVLDSI 356
+ REGLT +ISV+V P+FEGQTKT+LGN EV V+ + E L YLE HP +I
Sbjct: 325 DDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVNGVLPIRRYGEVLNYYLEEHPKEAKAI 384
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+
Sbjct: 385 VDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGT 444
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA---- 472
AKQGR+R FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A
Sbjct: 445 AKQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDK 504
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKIII+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+
Sbjct: 505 LRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCW 564
Query: 533 DDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
DA+ +K ++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA
Sbjct: 565 TDAQRQKFIDTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEA 623
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R+E I+ A N+D
Sbjct: 624 DYIFSMLMGEDVGPRREFIEENATYANID 652
>gi|288801620|ref|ZP_06407062.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
gi|288335662|gb|EFC74095.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
Length = 655
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/634 (47%), Positives = 428/634 (67%), Gaps = 26/634 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV + DNS++V D+GRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCQNIEVTINEDNSITVEDDGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD ++FTT + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETDKTGTRQQFWPDPEIFTTTV-YQWAIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
+ I L DPE + E F A GL+E+V++++ ++ L D V+ + + I I+
Sbjct: 204 GIKITLSDLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I
Sbjct: 264 VAVMYNTD-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKTYADNDPQISKQLEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+
Sbjct: 323 EIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSA
Sbjct: 383 KMICNKVILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK- 469
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEGDFEA 502
Query: 470 -KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + + + K + + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQAFIDKYANGDEEDKAIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ + + +FS LMG V+ R+E I+ A N+D
Sbjct: 623 N--DVDDIFSMLMGDDVEPRREFIEKNATYANID 654
>gi|390953352|ref|YP_006417110.1| DNA gyrase subunit B [Aequorivita sublithincola DSM 14238]
gi|390419338|gb|AFL80095.1| DNA gyrase subunit B [Aequorivita sublithincola DSM 14238]
Length = 646
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 294/625 (47%), Positives = 418/625 (66%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GPRGLHHLVYE++DN++DEA GY IE+ + DNSV+V DNGRGIP+DLH
Sbjct: 30 MYIGDVGPRGLHHLVYEVVDNSIDEAMGGYCDTIEMWINEDNSVTVKDNGRGIPVDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+T + AGGKF S Y VSGGLHGVG+SVVNALS L TV RDG + Q
Sbjct: 90 EGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSVVNALSGHLTATVHRDGKIWQQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V P+ D +GT + F PD +F ++++++T+A R+REL+FLN
Sbjct: 148 EYERGKALYP----VKPIGETDYRGTIVTFKPDADIFQQTLEYNYDTLASRMRELSFLNR 203
Query: 181 KLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
LTI + + EK + ++ GL+E++++L+ +++P+ V+ + + I ++
Sbjct: 204 GLTIYVTDKRHKDEKGEVVTEKFHSEEGLKEFIRFLDGNREPIIAQVISMEGEKNDIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++++ + Y N+I T +GGTH+ G +A LTRTL S + ++G
Sbjct: 264 VAMVYNT-SFNENLHSYVNNINTHEGGTHLAGFRAGLTRTLKKYADASGMLDKLKFEIAG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+ +I+
Sbjct: 323 DDFREGLTAIISVKVQEPQFEGQTKTKLGNREVMAAVSQAVSEMLENYLEEHPNDAKTIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+V+ LPGKL+DCS PE+ E+F+VEGDSAGG+A
Sbjct: 383 QKVILAAQARHAARKAREMVQRKTVMSGGGLPGKLSDCSEQDPEKCEVFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----AL 473
KQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K L
Sbjct: 443 KQGRDRNFQAILPLRGKILNVEKAMHHKVFENEEIRNIYTALGVTIGTEEDSKALNLTKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY + L + G IY+ PPLY V++G + +Y +
Sbjct: 503 RYHKVVIMCDADVDGSHIATLILTFFFRYMRELVEGGHIYIATPPLYLVKKGAKKEYAWS 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E ++ F +A IQR+KGLGEM QLW TT+NPE R L+Q+ I++ EA+ +F
Sbjct: 563 DKERDRLNEEFGGSA--GIQRYKGLGEMNAEQLWVTTMNPEFRTLRQVTIDNGTEADRIF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 621 SMLMGDEVPPRREFIEKNAIYANID 645
>gi|306821823|ref|ZP_07455415.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550130|gb|EFM38129.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 649
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/621 (48%), Positives = 434/621 (69%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DNA+DEA AG+ NI V++ +N ++V D+GRGIP+++HP
Sbjct: 38 MYIGSTGSKGLHHLVYEVVDNAIDEALAGFCKNIYVSIDVNNGITVIDDGRGIPVEVHPK 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T KS LETVLTVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V +DG Y Q
Sbjct: 98 TGKSTLETVLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKDGKIYKQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G PV+ + HV+ + +GT I F PD+ VF + + + R+RELAFLN
Sbjct: 156 EFEKGNPVSDV--HVVGDCPMEERGTCISFLPDETVFEETV-YSFEVLEHRLRELAFLNK 212
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGIT--IDL 238
++I L ED+ + +Y + GG+ EYV+ LN +++ L +V+ F K + + I++
Sbjct: 213 GISITL--EDNRTIEKVTRKYHYEGGIIEYVKALNKNREALTEVIYFNKLDEEFSYDIEI 270
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
A+Q+ +DAY + + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD + +GE
Sbjct: 271 AMQY-TDAYVENIYSFANNINTVEGGMHLIGFKSALTRVVNDYARKNNMLKEKDENFTGE 329
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT IISV++P P++EGQTKT+LGNP++R V+Q + + +LE +P I+
Sbjct: 330 DIREGLTAIISVKLPEPQYEGQTKTKLGNPQMRSSVEQITVDQVATFLEENPATARIIME 389
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + + +A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGGSAK
Sbjct: 390 KCMRSQRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGGSAK 449
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
+GR+ + QAILPLRGKILNVE+ +++ I+N+I A G G+ G +F LRYHKI
Sbjct: 450 EGRNSQNQAILPLRGKILNVEKARLDKALQSDTIKNMITAFGCGI-GSEFDDSKLRYHKI 508
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II++DADVDGAHIRTL+LTFF+RY + L ++G +Y+ PPL+ +E+GK+ Y Y EL
Sbjct: 509 IIMSDADVDGAHIRTLILTFFFRYMRPLIEKGYVYIAQPPLFSIEKGKKTYYAYSPEEL- 567
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ K + + R KGLGEM +L +TT++P +R+L ++ +EDA A+ +F LMG
Sbjct: 568 EAKLNEIGRERTVVSRNKGLGEMDAEELGDTTMDPAKRVLLKVNLEDAIAADEIFDILMG 627
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R+E IQ NA + NLD
Sbjct: 628 DKVEPRREFIQKNAKYVENLD 648
>gi|448540821|ref|ZP_21623742.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|448549124|ref|ZP_21627900.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|448555702|ref|ZP_21631631.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
gi|445708974|gb|ELZ60809.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|445713813|gb|ELZ65588.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|445717225|gb|ELZ68943.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
Length = 639
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 312/615 (50%), Positives = 419/615 (68%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFELGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L E +D + + + F GG+ E+V++LN K LHD V+ + + +GI +++A
Sbjct: 204 GVEISLTDERTD----ESSTFRFEGGIREFVEYLNETKTALHDNVIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSESELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|190710587|gb|ACE95124.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 310/615 (50%), Positives = 420/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY I V++ DNS+ V DNGRGIP+ +
Sbjct: 24 MYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQKK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LH V SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHDVVASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F +D +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIECGNIYIAQPPLFKIQQGKKIQYAYNDKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|373501103|ref|ZP_09591470.1| DNA gyrase, B subunit [Prevotella micans F0438]
gi|371950694|gb|EHO68548.1| DNA gyrase, B subunit [Prevotella micans F0438]
Length = 657
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/634 (47%), Positives = 420/634 (66%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY NIEV L D SV+V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCKNIEVTLNEDGSVTVEDDGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSAHMKSQVFRDGNIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + + + ++ GTR +FWPD +FTT F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKI----IGTTEKTGTRQQFWPDNSIFTTTT-FQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPE--KNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L PE K + + GL+E+V++++ ++ L +DV+ + + GI I+
Sbjct: 204 GIKIILTDMHPHPETGKTRTETFHAEDGLKEFVRYVDRHRQHLFNDVIYLKTEKQGIPIE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDI 293
+A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I
Sbjct: 264 IAIMYNTD-YTENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADGEPTISKQIEKAKI 322
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP+
Sbjct: 323 EIAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPNEA 382
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I +K + A A +AA+ AR+ V++K+V+ LPGKLADCS P++ EIF+VEGDSA
Sbjct: 383 KLICNKVILAATARIAARNARESVQRKNVMSGGGLPGKLADCSKKDPKDCEIFLVEGDSA 442
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGED---F 468
GGSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED
Sbjct: 443 GGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEDDYEA 502
Query: 469 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK K
Sbjct: 503 NTDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCTYKKIS 562
Query: 529 QYCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY + + + K QR+KGLGEM P QLWETT++P+ R+LKQ+ IE
Sbjct: 563 EYCYTEQQRQMFIDKYGDGTEDGKNIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVNIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAAEADEIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|282880626|ref|ZP_06289332.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
gi|281305521|gb|EFA97575.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
Length = 657
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/635 (47%), Positives = 424/635 (66%), Gaps = 26/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY ++IEV + D S++V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTINEDESITVQDNGRGIPVDQHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMTSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GK + + V D++GTR +FWPD +FTT F + IA R+RELAFLN
Sbjct: 149 EYEKGKALYPVKV----VGETDKRGTRQQFWPDGSIFTTT-HFQWDIIARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLTDLRPNEEGKTRTEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + SK ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADSEPTISKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPTEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 QICEKVVLAATARIAARKARESVQRKNFMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEADREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK + K
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCSYKNKAS 562
Query: 529 QYCYDDAELKKVKSSFP-----SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
+YCY + + + + S ++++ QR+KGLGEM P QLWETT+NP+ R+LKQ+ I
Sbjct: 563 EYCYTEQQRQAFIDKYANGEEDSKSIHT-QRYKGLGEMNPEQLWETTMNPKTRLLKQVTI 621
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 ENAADADEIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|298374500|ref|ZP_06984458.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19]
gi|298268868|gb|EFI10523.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19]
Length = 651
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 300/627 (47%), Positives = 422/627 (67%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG T +GLHHLVYE++DN++DEA AGY + I+V + DNS++V D+GRGIP+D+H
Sbjct: 32 MYIGDTSEKGLHHLVYEVVDNSIDEALAGYCTYIDVVINEDNSITVTDDGRGIPVDIHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 92 EGKSALEVVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ V +D+ D+ GT I F P+ +FT ++ ++ +A R+RELAFLN
Sbjct: 150 EFSCGKPLHD----VQVIDNTDKTGTTISFKPNGSIFTVT-EYKYDILATRLRELAFLNA 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L + E + F GL+E+V++++ K+ L DV+ + GI ++
Sbjct: 205 GITLRLTDKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + + +Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G
Sbjct: 265 VALTYNT-SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+
Sbjct: 324 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+A
Sbjct: 384 DKVILAAQARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E L
Sbjct: 444 KQGRDRNFQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+
Sbjct: 504 RYHKVIIMTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWT 563
Query: 534 DAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + ++ + SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+
Sbjct: 564 EQQRQQFILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQ 623
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+F+ LMG V R+E I+ A N+D
Sbjct: 624 IFAMLMGEDVGPRREFIEENATYANID 650
>gi|227500982|ref|ZP_03931031.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus tetradius ATCC
35098]
gi|227216755|gb|EEI82153.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus tetradius ATCC
35098]
Length = 641
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 313/621 (50%), Positives = 428/621 (68%), Gaps = 24/621 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN+VDEA AG I+V + DN VSV D+G GIP+ HP
Sbjct: 34 MYIGSTSQRGLHHLVYEVVDNSVDEALAGRCDYIKVTIDKDNVVSVEDDGSGIPVKEHPT 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T+KS LETVLTVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V RDG Y
Sbjct: 94 THKSTLETVLTVLHAGGKF--DDSAYKVSGGLHGVGVSVVNALSEYLIAEVKRDGHIYKM 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++RG+ +T + + GT+I F D ++F T I +D + R RE+AFLN
Sbjct: 152 EFARGE----VTKDIEVIGDTVETGTKITFKADGEIFDTTI-YDRTILENRFREMAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV----GFRKDVDGITI 236
+ I E D + + + F GG+ E+V +LN +K P+ +++ GF++D + +
Sbjct: 207 GVEIQFEDEREDFKTS----FKFEGGISEFVAYLNRNKDPIMEMIPNFDGFQEDTE---V 259
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ A Q+ +DAYS+ +L YAN+I+T +GG+H+ G+++SLTRT+N +K +KD + +L
Sbjct: 260 EFAFQY-TDAYSENILSYANNIQTPEGGSHLAGLRSSLTRTVNDYARKYNFLKDNEDNLQ 318
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REG+T IISV++ +P+FEGQTK++LGN EVR VD + E+L +LE +P +I
Sbjct: 319 GEDIREGITAIISVKITDPQFEGQTKSKLGNSEVRGAVDTFISEHLANFLEENPKPAKAI 378
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L++ +A AA++ARDL R++S+L S++LPGKLADC ST E+EIFIVEG+SAGGS
Sbjct: 379 IDKALASRRAREAARKARDLTRKRSILDSATLPGKLADCQSTDIGENEIFIVEGNSAGGS 438
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AK GRD R QAILPLRGKI+NVE+ + +EEI+N+I A G G+ G++F E LRY
Sbjct: 439 AKGGRDNRIQAILPLRGKIMNVEKAHLDRVLNSEEIKNMITAFGTGI-GKEFDLEKLRYG 497
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYRY K L D+G +YV +PPLY++ GK+ +Y Y D E
Sbjct: 498 KIIIMTDADVDGAHIRTLLLTFFYRYMKDLIDKGHVYVALPPLYRISVGKKERYVYSDDE 557
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED--AAEANVVFS 594
KV + Y I R+KGLGEM QLWETT++P++R+L + V+ED + + F+
Sbjct: 558 RDKVIKELGVDN-YKINRYKGLGEMNAEQLWETTMDPDRRVLLR-VVEDMESTTTDDTFA 615
Query: 595 SLMGARVDTRKELIQNAANLV 615
LMG +V+ R+ IQ A V
Sbjct: 616 LLMGEKVEPRRNFIQENAKYV 636
>gi|298207945|ref|YP_003716124.1| DNA gyrase subunit B [Croceibacter atlanticus HTCC2559]
gi|83850586|gb|EAP88454.1| DNA gyrase subunit B [Croceibacter atlanticus HTCC2559]
Length = 645
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/625 (46%), Positives = 421/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA GY I+V + DNS++ DNGRGIPI +H
Sbjct: 29 MYIGDVGIRGLHHLVYEVVDNSIDEAMGGYCDTIDVIINEDNSITTKDNGRGIPIGIHKK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ +V +DG + Q
Sbjct: 89 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKASVHKDGKIWEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGKP+ V V D GT + F PD Q+F I++++ T+A R+RELAFLN
Sbjct: 147 EYERGKPLYP----VKAVGDTDFSGTVVTFHPDNQIFQQTIEYNYETLASRMRELAFLNK 202
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
LTI L + +K ++ +E FF+ GL E+V++L+ ++ P+ DV+ + +G+ ++
Sbjct: 203 GLTITLTDKRQTDDKGEFISERFFSEEGLSEFVRFLDGNRDPIIKDVISMEGEKNGVPVE 262
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + S +Y++ + Y N+I T +GGTH+ G + LT +L S + ++G
Sbjct: 263 VAMIYNS-SYAENLHSYVNNINTHEGGTHLAGFRRGLTSSLKKFADASGMLDKLKFDIAG 321
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E + ++E +P+ +I+
Sbjct: 322 DDFREGLTAIISVKVSEPQFEGQTKTKLGNREVTSAVSQAVSEMIEIHMEENPNDAKTII 381
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AAK+AR++V++K+V+ LPGKL+DCS+ P E E+F+VEGDSAGG+A
Sbjct: 382 EKVILAAQARHAAKKAREMVQRKTVMSIGGLPGKLSDCSNQDPAECEVFLVEGDSAGGTA 441
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K L
Sbjct: 442 KQGRDRAFQAILPLRGKILNVEKAMSHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKL 501
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+ DADVDG+HI TL+LTFF+RY K L + G IY+ PPLY +++G++ +Y ++
Sbjct: 502 RYHKIVIMCDADVDGSHIATLILTFFFRYMKELIEAGHIYIATPPLYLIKKGQKKRYAWN 561
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ E + + + F + S+QR+KGLGEM QLW+TT+NPE R L+Q+ I++ EA+ +F
Sbjct: 562 EDEREAIANEFKGSV--SVQRYKGLGEMNAEQLWDTTMNPEFRTLRQVAIDNGVEADRIF 619
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 620 SMLMGDDVPPRREFIEKNAKYANID 644
>gi|395218293|ref|ZP_10401952.1| DNA gyrase subunit B [Pontibacter sp. BAB1700]
gi|394454663|gb|EJF09280.1| DNA gyrase subunit B [Pontibacter sp. BAB1700]
Length = 652
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/632 (48%), Positives = 430/632 (68%), Gaps = 27/632 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLV+E++DN++DEA AG+ I V + +NS++V+DNGRGIP D H
Sbjct: 33 MYIGDIGIKGLHHLVWEVVDNSIDEALAGHCDTINVTINTNNSITVSDNGRGIPTDFHQK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L VTV R+G + Q
Sbjct: 93 EGRSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTDLHVTVHRNGKVFEQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y+ G P V + + D+ GT + F PD +FTT ++ ++TIA R+REL+FLN
Sbjct: 151 HYNIGVPAYP----VREIGTTDKTGTTVTFQPDASIFTTT-EYKYDTIASRLRELSFLNK 205
Query: 181 KLTIALR--KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L +E + + + ++ GGL+E+V +L+ ++ L + + + +G+ ++
Sbjct: 206 GIRINLTDLRETGEDGQPLSDSFYSEGGLKEFVAYLDETRENLIPEPIHIESEKNGVPVE 265
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+ALQ+ + +Y++ + Y N+I TI+GGTH+ G + +LTRTL + KS + I ++G
Sbjct: 266 IALQYNT-SYTENIFSYVNNINTIEGGTHVGGFRRALTRTLKAYADKSGMLDKLKIDIAG 324
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN +V VD +V E L ++LE +P +I+
Sbjct: 325 DDFREGLTAVISVKVQEPQFEGQTKTKLGNSDVGGAVDTAVGEMLNQFLEENPKEARTIV 384
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+VL S+SLPGKLADCS PE EI++VEGDSAGGSA
Sbjct: 385 QKVILAAQARNAARKAREMVQRKNVLSSTSLPGKLADCSDNNPENCEIYLVEGDSAGGSA 444
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG---VKGED-FKKEAL 473
KQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+I ALG+ +GE E L
Sbjct: 445 KQGRNRMFQAILPLRGKILNVEKAQEHRIYENEEIKNMITALGVSFGTAEGEKALNMEKL 504
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYH+III+TDADVDG+HIRTL+LTFF+RY K L + G IY+ +PPLY V++GK+ +YC+
Sbjct: 505 RYHRIIIMTDADVDGSHIRTLILTFFFRYMKELIENGYIYIALPPLYLVKKGKEERYCWS 564
Query: 534 D-------AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
+ AEL K K +QR+KGLGEM P QLW TT++PE R LK++ IE A
Sbjct: 565 EQDRIDAIAELGKGKEDS-----VGVQRYKGLGEMNPEQLWNTTMDPETRSLKRVTIESA 619
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
AEA+ +FS LMG V R++ I+ A +D
Sbjct: 620 AEADHLFSMLMGDEVGPRRDFIERNAKYARVD 651
>gi|433452726|ref|ZP_20412950.1| DNA gyrase, B subunit [Mycoplasma sp. G5847]
gi|431933537|gb|ELK20112.1| DNA gyrase, B subunit [Mycoplasma sp. G5847]
Length = 634
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/620 (48%), Positives = 414/620 (66%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EILDN++DEA AGYA+ I V + DN V V DNGRGIP+ ++
Sbjct: 25 MYIGSTSKTGLHHLVWEILDNSIDEAMAGYANLINVTITKDNEVIVQDNGRGIPVGINSD 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
TNKSAL V T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+RD YHQ
Sbjct: 85 TNKSALSLVFTQLHAGGKF--DSETYKISGGLHGVGASVVNALSLFVEVDVYRDNTHYHQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+S G T + + + QGT+++F PD ++F + FD+ I ++++LAFLN
Sbjct: 143 LFSEG---GTKESALEQLGHTELQGTKVKFKPDPEIFKETVIFDYEIIKNKVKQLAFLNK 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L +D + EY F G+ +Y++ N K ++ ++ + I +++A
Sbjct: 200 GLKITL----TDERIEKTVEYLFVNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ SD Y + ++ + N+I T +GGTH +G+K +L R +N S +
Sbjct: 256 LQYNSD-YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNTKSPSKFSWDD 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EG+ CI+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K
Sbjct: 315 IKEGMMCILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+++A KA +AA++AR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK
Sbjct: 375 NVNAQKARIAAQKAREETRRKSALDSFSLPGKLADCETKDSSIAELYLVEGDSAGGSAKT 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R+FQAILPLRGK+LNVER EA + N EI+++I A+G G+K E+ LRY KI+
Sbjct: 435 GRNRKFQAILPLRGKVLNVERVTEARAFSNNEIKSIITAVGTGIK-EELDLSKLRYKKIV 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y DA+L +
Sbjct: 494 IMTDADVDGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDAQLDE 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K++ +N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG
Sbjct: 554 LKNNEFNNLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGE 613
Query: 600 RVDTRKELIQNAANLV-NLD 618
+ RK IQ+ A V N+D
Sbjct: 614 DPELRKNYIQDNAKFVENID 633
>gi|442803502|ref|YP_007371651.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442739352|gb|AGC67041.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 643
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 308/626 (49%), Positives = 418/626 (66%), Gaps = 17/626 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEILDN++DEA AG+ I+V + DNSV+ DNGRGIP+ +HP
Sbjct: 31 MYIGSTSVRGLHHLVYEILDNSIDEALAGFCDKIKVIIHKDNSVTNIDNGRGIPVGIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE V T LH+GGKFGGS GY VSGGLHGVG +VVNALSE + V V RDG Y Q
Sbjct: 91 MGIPTLEVVHTTLHSGGKFGGS--GYKVSGGLHGVGAAVVNALSEWMVVEVMRDGKRYRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK VT + V D GT F PD ++F ++FD+ + R RE+AFLN
Sbjct: 149 RYERGKAVTGIEI----VGEADSTGTITTFKPDPEIFE-VVEFDYEMLLKRFREIAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
LTI E D K N + GG+ +V+++N +K +HD ++ + + I++A
Sbjct: 204 GLTIQFIDERGDEVKE--NILHYEGGIISFVKYINQNKDVIHDDIIYLEGQKENMEIEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D++++ + YAN+I T +GGTH+ G KA++T+ +N +K +KD D +LSGE
Sbjct: 262 FQY-TDSFNENIFSYANNIPTTEGGTHVTGFKAAITKVINDYARKINMLKDNDKNLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T II++++ +P+FEGQTKT+LGN +VR+ V+ V E L LE +P I+ K
Sbjct: 321 VREGITAIINMKLTDPQFEGQTKTKLGNADVRQFVENLVTEKLQYILEENPKTARIIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL++ +A AA++AR+L ++KS + + SLPGKLADC P E+FIVEGDSAGGSAK
Sbjct: 381 SLASYRAREAARKARELTKRKSAMENFSLPGKLADCQEKDPRLCELFIVEGDSAGGSAKM 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRR+QAILPL GK+LNVE+ +Y N+++ +I ALG G G+D LRYHK+I
Sbjct: 441 GRDRRYQAILPLWGKMLNVEKSRADKVYGNDKLTPIITALGAGF-GDDMDLSKLRYHKVI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDG HIRTLLLTFFYRY + L + G +Y+ +PPLYKV +GK+ Y Y+D EL+K
Sbjct: 500 IMADADVDGHHIRTLLLTFFYRYMRPLIENGHVYIALPPLYKVSKGKEEYYVYNDNELEK 559
Query: 540 V---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
+ K IQRFKGLGEM P QLWETT++P+ R + ++ + + EA +F+ L
Sbjct: 560 LLKEKGWKRGEGSLIIQRFKGLGEMNPEQLWETTMDPKTRKMLKVDLNNPVEAEEIFTIL 619
Query: 597 MGARVDTRKELIQNAANLVNLDHLDI 622
MG +V+ RKE I A VN +LD+
Sbjct: 620 MGEKVEPRKEFIHQYAKKVN--NLDV 643
>gi|73747960|ref|YP_307199.1| DNA gyrase subunit B [Dehalococcoides sp. CBDB1]
gi|147668656|ref|YP_001213474.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452202849|ref|YP_007482982.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452204330|ref|YP_007484459.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
gi|73659676|emb|CAI82283.1| DNA gyrase, subunit B [Dehalococcoides sp. CBDB1]
gi|146269604|gb|ABQ16596.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452109908|gb|AGG05640.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452111386|gb|AGG07117.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
Length = 642
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 416/620 (67%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + D SVSV DNGRGIP+D+H
Sbjct: 36 MYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVIMFKDGSVSVEDNGRGIPVDIHST 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALETV+TVLHAG KFGG + Y VSGGLHGVG SVVNALSE V V R+G Y Q
Sbjct: 96 TKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALSEWTTVKVRRNGKIYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP T L V + GT F D Q+F+T ++D T+ R+RE+A+LN
Sbjct: 154 SYLRGKPSTPLE----EVGVSEGSGTTTIFMADSQIFSTT-EYDFETLTDRLREIAYLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + + E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A
Sbjct: 209 GLEVYIYDEKSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YSD+ L +AN + T+DGGTH+ G +++LTR N KSK +KD D +L G+
Sbjct: 265 IQY-NDGYSDSTLTFANCVNTVDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+ I+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K
Sbjct: 324 VREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVESAVAEQLSLYLEEHPDDTKRILEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A KA AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQ
Sbjct: 384 CITAAKAREAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++
Sbjct: 444 GRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGIDN-DFDPSKLRYNRLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE +
Sbjct: 503 LMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSTEHWVYNDAEKEA 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + S + IQR+KGLGEM QLW TT++P R L ++ +EDAA+A+ +F+ LMG
Sbjct: 563 ILAQTKSTKV-DIQRYKGLGEMSAEQLWRTTMDPASRTLLEVKVEDAAKADQIFNLLMGG 621
Query: 600 RVDTRKELIQNAANLV-NLD 618
V RK IQ+ + V NLD
Sbjct: 622 EVAPRKAFIQSHSRTVKNLD 641
>gi|448591298|ref|ZP_21650899.1| DNA gyrase subunit B [Haloferax elongans ATCC BAA-1513]
gi|445733557|gb|ELZ85124.1| DNA gyrase subunit B [Haloferax elongans ATCC BAA-1513]
Length = 639
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 308/615 (50%), Positives = 420/615 (68%), Gaps = 13/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY IEV L D SVSVADNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDAIEVTLHEDGSVSVADNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N+ A+E ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV + RDG +H
Sbjct: 87 YNRPAVEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTELEVEIMRDGAVWHH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ +G+PV V ++ + GT I FWPD ++F T F T+ R+RELAFLN
Sbjct: 145 RFEKGEPVQGAFERVRDMEPDEETGTTITFWPDNEIFETT-DFTFKTLETRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L E S+ + + + F GG+ E+V++L+ K LHD ++ + + +GI +++A
Sbjct: 204 GVEISLTDERSE----ESSTFMFEGGIREFVEYLDETKTALHDDIIYYEDETEGIAVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSEGMLSDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ E L Y E +PDV +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESITHEKLGTYFEENPDVATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S++LPGKLADC S P +SE+F+VEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKKAEELTRRKSALESTALPGKLADCQSRDPSKSELFVVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR FQAILP++GKILNVE+ + +N E++ LI A+G G+ G++F + RY +I
Sbjct: 439 QGRDREFQAILPIKGKILNVEKHRLDRILENNEVRALITAIGAGI-GDEFDIDDARYQRI 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAEL 537
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V RG ++
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMTEEDRD 557
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ ++ N +QRFKGLGEM P QLWETT+NPE R+LK++ +EDAA A+ +FS LM
Sbjct: 558 RIIEEKCNGNPT-QVQRFKGLGEMNPDQLWETTMNPENRVLKRITVEDAAAADRMFSILM 616
Query: 598 GARVDTRKELIQNAA 612
G V+ RK+ I++ A
Sbjct: 617 GDAVEPRKQFIKDHA 631
>gi|110598305|ref|ZP_01386580.1| DNA gyrase, B subunit [Chlorobium ferrooxidans DSM 13031]
gi|110340113|gb|EAT58613.1| DNA gyrase, B subunit [Chlorobium ferrooxidans DSM 13031]
Length = 649
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 310/624 (49%), Positives = 419/624 (67%), Gaps = 26/624 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG RGLHHLVYEI+DN++DE G+ I VAL + SV+V D GRGIP+D+HP
Sbjct: 38 MYIGDIHSRGLHHLVYEIVDNSIDETLGGFNDYIFVALNPEGSVTVIDRGRGIPVDIHPE 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG Y Q
Sbjct: 98 KQKSALELVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGNVYFQ 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG P V + D++GT+ F PD Q+F T +F + I R+RELAFLN
Sbjct: 156 RFERGIP----QGDVRVIGKTDKKGTKTTFMPDHQIFKTT-EFRKDIIIDRMRELAFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGIT 235
+L+I ++ + E + + GG++E+VQ+ +N K+P++ + G R D
Sbjct: 211 ELSITVQDTEGIDEI-----FHYVGGIKEFVQFTDQNRINLLKEPIY-LYGER---DSTI 261
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++ALQ+ +D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL
Sbjct: 262 VEIALQY-NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLSL 320
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+G+ +EGLT +ISV+V P+FEGQTKT+LGN E + +V+ V E L E+ E +P+VL
Sbjct: 321 TGDDFKEGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVETIVNEQLAEFAESNPNVLKM 380
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I+ K A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGG
Sbjct: 381 IIEKVKGAAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGG 440
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAKQGRDR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY
Sbjct: 441 SAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSTEKLRY 500
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 535
KIII+TDADVDGAHIRTLLLTFF+R+ ++L + G +++ PPLY V+ GK+ QY +DD
Sbjct: 501 GKIIIMTDADVDGAHIRTLLLTFFFRHMRSLIEAGRVFIAQPPLYLVKSGKEQQYAWDDD 560
Query: 536 ELKKVKSSFPS----NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
E + S A IQR+KGLGEM P QLW TT++P R L + +E+A EA+
Sbjct: 561 ERNSITESMKKMQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLLVNVENAMEADQ 620
Query: 592 VFSSLMGARVDTRKELIQNAANLV 615
VFS+LMG +V+ R+E I+ A V
Sbjct: 621 VFSTLMGDKVEPRREFIEKNARYV 644
>gi|255038730|ref|YP_003089351.1| DNA gyrase subunit B [Dyadobacter fermentans DSM 18053]
gi|254951486|gb|ACT96186.1| DNA gyrase, B subunit [Dyadobacter fermentans DSM 18053]
Length = 651
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/628 (47%), Positives = 426/628 (67%), Gaps = 19/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG +G+HHL++E++DN++DEA AGY I V + +NS++V DNGRGIP +HP
Sbjct: 32 MYIGDTGFKGVHHLIWEVVDNSIDEAMAGYCDTINVTVEKNNSITVKDNGRGIPTGMHPK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE VLTVLHAGGKF + Y VSGGLHGVG+S VNALS L V R+G + Q
Sbjct: 92 ENKSALEVVLTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSIHLRAEVHREGKIFEQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ + ++ GT I F PD +FT ++ + TIA R+REL++LN
Sbjct: 150 EFSEGKPLYPTRV----IGDSEKTGTIIHFLPDATIFTVT-EYKYETIATRLRELSYLNK 204
Query: 181 KLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L + + E Q+ E++ GL E+V +L+ ++PL + + D I ++
Sbjct: 205 GIRITLEDKREEDENGQFRGEEFYSEVGLNEFVTYLDATRQPLIPEPIHMENDKGVIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +KS + + + +SG
Sbjct: 265 VAMMYNT-SYSENVFSYVNNINTIEGGTHVSGFRAALTRTLKNYAEKSGILAKEKVEISG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV V Q V E L YLE HP I+
Sbjct: 324 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTAAVSQVVAEMLENYLEEHPKEARVII 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A KA +AAK+AR++V++K++L + LPGKL+DCS T P E+++VEGDSAGG+A
Sbjct: 384 DKVILAAKARIAAKKAREMVQRKNILTGTGLPGKLSDCSETDPNVCELYLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----- 472
KQGR+R FQAILPLRGKILNVE+ E +Y+NEEI+N+ A+G+ + G+D + A
Sbjct: 444 KQGRNRAFQAILPLRGKILNVEKAQEYKIYENEEIKNMFTAMGVQI-GKDGDERALNIDK 502
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHKI+I+TDAD+DG+HIRTL+LTFF+RY K L D G IY+ PPLY V++GK+ +YC+
Sbjct: 503 LRYHKIVIMTDADIDGSHIRTLILTFFFRYMKILIDNGYIYIAQPPLYLVKKGKEERYCW 562
Query: 533 DDAELKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ + ++ + S +QR+KGLGEM QLWETT+NPE+R LKQ+ +E AAEA+
Sbjct: 563 TEQQREEAIREIGAGKEDSVNVQRYKGLGEMNAEQLWETTMNPERRSLKQVSVESAAEAD 622
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R++ I+ A +D
Sbjct: 623 HLFSMLMGDEVAPRRDFIEKNAKYARVD 650
>gi|116332686|ref|YP_794213.1| DNA gyrase, B subunit [Lactobacillus brevis ATCC 367]
gi|116098033|gb|ABJ63182.1| DNA gyrase subunit B [Lactobacillus brevis ATCC 367]
Length = 647
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 407/620 (65%), Gaps = 10/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN +DEA AG+A I V + DNS++V DNGRGIPI +
Sbjct: 35 MYIGSTSSQGLHHLVWEIVDNGIDEALAGFADEIHVTVNQDNSITVTDNGRGIPIGIQKK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALETV T+LHAGGKFGG S LHGVG SVVNALS LE V RDG Y
Sbjct: 95 TGKPALETVFTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSTDLEAQVTRDGKTYAI 152
Query: 121 KYSRGKPVTTLTCHVLPVD-SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
+ G T + HV+ +D+ GT + F PD +F FD T+ RIRELAFLN
Sbjct: 153 AFDHGHVKTPM--HVIKEGLPQDQHGTAVHFLPDPDIFRETTVFDIKTLTTRIRELAFLN 210
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDL 238
L I +R D PEK ++ + GG+ YV +LN +K+ L + + +GIT+++
Sbjct: 211 KGLRITIR--DERPEKPTEEDFLYEGGIRHYVDYLNENKETLFEPPIYVEGQENGITVEV 268
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ D Y + +L + N+I T +GGTH EG K +LTR +N +++K +KD + +L+G+
Sbjct: 269 ALQYTDD-YHNNLLTFTNNIHTYEGGTHEEGFKRALTRVVNDYARQNKLMKDNEANLTGD 327
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT ++SV+ P+P+FEGQTKT+LGN + R VD + ++ ++ HPDV I+
Sbjct: 328 DVREGLTAVVSVKHPDPQFEGQTKTKLGNSDARTAVDHTFADHFMRFMMEHPDVARKIVD 387
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K A KA +AAKRAR++ R+KS L S+LPGKLAD +S PE SE+FIVEGDSAGGSAK
Sbjct: 388 KGTLASKARVAAKRAREVTRKKSGLEISNLPGKLADNTSKDPEISELFIVEGDSAGGSAK 447
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR R QAILP+RGKILNVE+ + NEEI++L A+G G G DF + YHK+
Sbjct: 448 QGRSRLTQAILPIRGKILNVEKASMDRILANEEIRSLFTAMGTGF-GNDFDVSKVNYHKL 506
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YRY + L D G +Y+ PPLY+V +GK +Y D ELK
Sbjct: 507 ILMTDADVDGAHIRTLLLTLVYRYMRPLLDAGFVYIACPPLYRVRQGKMQRYLDSDEELK 566
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ P + IQR+KGLGEM QLWETT+NPE R L ++ +DA A+ VF+ LMG
Sbjct: 567 DLLGQLPPSPKPQIQRYKGLGEMDAEQLWETTMNPENRRLLRVDAQDAINADQVFTMLMG 626
Query: 599 ARVDTRKELIQNAANLVNLD 618
+V R+E I+N A LD
Sbjct: 627 DKVAPRREFIENNATFAELD 646
>gi|13878524|sp|O29720.2|GYRB_ARCFU RecName: Full=DNA gyrase subunit B
Length = 632
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 307/619 (49%), Positives = 421/619 (68%), Gaps = 18/619 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHL++E++DNAVDEA AGY I+V+L D S SV DNGRGIP ++H
Sbjct: 30 MYIGGVGVRGLHHLLWEVVDNAVDEALAGYCDTIKVSLHKDGSASVEDNGRGIPTEMH-E 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE V+T LHAGGKF S Y VSGGLHGVG+SVVNALSE LEV V R+G Y+Q
Sbjct: 89 LGKSALEIVMTKLHAGGKF--SKKVYRVSGGLHGVGVSVVNALSEWLEVWVKRNGKIYYQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG + GT +RF PD+++F T +F + +A R++ELA+LN
Sbjct: 147 KYQRGSRSPEAGHRTEVLGETKEHGTTVRFKPDREIFETT-EFKYEIVAQRLKELAYLNR 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L I L E E+ + F G+ V+ LN ++KPLH+ + DG+++++A+
Sbjct: 206 GLKIILFDEREGKEET----FHFEDGIIGLVRSLNRNRKPLHEPIYIETTKDGVSVEVAI 261
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D+ + + +AN+I T +GG+H+ G +A LTR +N GKK K ++G +
Sbjct: 262 QF-TDSDVENIQAFANNINTSEGGSHVVGFRAGLTRAVNEYGKKHL---KKFEPVTGVDI 317
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REGLT +ISV+VP P+FEGQTKT+L N +V+ VV+ +V + +LE +P +++L+K
Sbjct: 318 REGLTAVISVKVPEPQFEGQTKTKLTNSDVKTVVESAVYSGVLRWLEENPAQAETLLNKF 377
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
+ KA AAKRA++LV++K+ L ++LPGKLADCSS PEE E+FIVEG+SAGGSAKQ
Sbjct: 378 ILNKKAREAAKRAKELVKRKNEL-ITTLPGKLADCSSKNPEERELFIVEGESAGGSAKQA 436
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDRRFQAILP++GKI+NVE+ A + KN+EI+ +I A+G G+ G+DF RY +III
Sbjct: 437 RDRRFQAILPIKGKIINVEKAGMARVLKNDEIKAIISAIGAGI-GKDFDITKARYRRIII 495
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L + G +Y+ PPLY++++GK+ Y Y D ELK+
Sbjct: 496 MTDADVDGAHIRTLLLTFFYRYMRPLIESGYLYIAQPPLYQIKKGKKSYYAYSDEELKRT 555
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+QR+KGLGEM P QLWETT+NPE R+L Q+ +EDA A+ +FS LMG
Sbjct: 556 LEQVGGG---EVQRYKGLGEMNPQQLWETTMNPENRILIQVTLEDAKRADELFSILMGED 612
Query: 601 VDTRKELIQ-NAANLVNLD 618
V++R+ I ++ + NLD
Sbjct: 613 VESRRNFIMAHSKEVKNLD 631
>gi|110637817|ref|YP_678024.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406]
gi|110280498|gb|ABG58684.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406]
Length = 652
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/629 (47%), Positives = 429/629 (68%), Gaps = 20/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLV+E++DN++DEA AG+ ++I V + +NS++V DNGRGIP +
Sbjct: 32 MYIGDIGIKGLHHLVWEVVDNSIDEALAGHCTDITVEINENNSITVTDNGRGIPTGVIAK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS ++VTV+ G + Q
Sbjct: 92 YGKSALEVVLTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSTDMKVTVYSHGKVHQQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +G P V + D GT+++F PD +FT++ ++ + TIA R+REL+FLN
Sbjct: 150 EYKKGIP----QYDVKEIGESDLHGTKVQFLPDDTIFTSS-EYKYETIANRLRELSFLNK 204
Query: 181 KLTIALRKEDS-DPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITID 237
+ I L+ D E E F + GGL E+V +L++ ++ L + + G I ++
Sbjct: 205 GIRITLQDHRQVDAEGKSEIEMFHSEGGLREFVDYLDSTREKLIPTPLYMESDKGPIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +YS+ + Y N+I TI+GGTH+ G + +LTRTL S KS ++ + ++G
Sbjct: 265 VAMLYNT-SYSENVFSYVNNINTIEGGTHVAGFRRALTRTLKSYADKSGMLEKLKMEVTG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN +V VDQ V E L YLE +P I+
Sbjct: 324 DDFREGLTAVISVKVQEPQFEGQTKTKLGNSDVMGAVDQVVGEMLNTYLEENPKEAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+VL S LPGKLADCS + PE+ E+++VEGDSAGGSA
Sbjct: 384 QKVILAAQARNAARKAREMVQRKNVLSGSGLPGKLADCSESDPEKCELYLVEGDSAGGSA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR++ AILPLRGKILNVE+ E +Y+N+EI+N+I ALG+ E+ +K L
Sbjct: 444 KQGRDRKYHAILPLRGKILNVEKAQEHRIYENDEIKNMITALGVSFGTEEGEKVLNLTKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDAD+DG+HIRTL+LTFF+RY + L D G +Y+ PPLY V+RGK+ +YC+
Sbjct: 504 RYHKVIIMTDADIDGSHIRTLILTFFFRYMRALIDGGHVYIAQPPLYLVKRGKEEKYCWT 563
Query: 534 ----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 589
+A +K++ +++ IQR+KGLGEM P QLW TT++PE+R LKQ+ +E AAEA
Sbjct: 564 EEQREAAVKELAKDGKEDSV-GIQRYKGLGEMNPEQLWSTTMDPEKRSLKQVSVESAAEA 622
Query: 590 NVVFSSLMGARVDTRKELIQNAANLVNLD 618
+ +FS LMG V R++ I+ A +D
Sbjct: 623 DHLFSMLMGDEVAPRRDFIEKNARYAKID 651
>gi|448352648|ref|ZP_21541429.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
gi|445641927|gb|ELY94998.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
Length = 643
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/616 (48%), Positives = 419/616 (68%), Gaps = 11/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ I V++ D+S+SVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINEDDSISVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALS LE TV RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLETTVKRDGGVYEH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+ G+P+ + V ++ + GT I+FWPD +F TT + F +T++ R+RELAFLN
Sbjct: 145 AFEIGEPIGDME-RVRDMEPDEETGTEIQFWPDDDIFETTDMSF--STLSNRLRELAFLN 201
Query: 180 PKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I LR E E + Y + GG+ E+V++LN + +H D++ F + + +
Sbjct: 202 SGVRITLRDERERTEDGEAVAETYEYEGGIREFVEYLNETRSAMHEDIIYFEDEDQNVRV 261
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D + +L
Sbjct: 262 EVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYGNENNLLSDIEENLK 320
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E HPD +I
Sbjct: 321 GEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDCLGTYFEEHPDTAQAI 380
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGS
Sbjct: 381 VMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGS 440
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I +G G+ G++F E +RY
Sbjct: 441 AKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITGIGAGI-GDEFDVEDVRYK 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + DAE
Sbjct: 500 KIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS L
Sbjct: 560 RDEIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVL 619
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I+ A
Sbjct: 620 MGDAVEPRKQFIKENA 635
>gi|441497053|ref|ZP_20979274.1| DNA gyrase subunit B [Fulvivirga imtechensis AK7]
gi|441439184|gb|ELR72507.1| DNA gyrase subunit B [Fulvivirga imtechensis AK7]
Length = 651
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/628 (47%), Positives = 421/628 (67%), Gaps = 18/628 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHL++E++DN++DEA AGY + I V + +NS++V+DNGRGIP D+H
Sbjct: 31 MYIGDVGVKGLHHLIWEVVDNSIDEALAGYCNEISVTINENNSITVSDNGRGIPTDIHTK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L V R+G Y Q
Sbjct: 91 EKRSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTDLRAEVHRNGKIYEQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y G P + V + D+ GT I F PD +F ++ + T+A R+RELA+LN
Sbjct: 149 EYKIGVPQYS----VREIGDTDKTGTTITFQPDSSIFNVT-EYTYETVASRLRELAYLNA 203
Query: 181 KLTIALRKEDSDPE--KNQYNEYFFAGGLEEYVQWLN-TDKKPLHDVVGFRKDVDGITID 237
+ I L+ + K + +++F GGL+E+VQ+L+ T +K + + + + +
Sbjct: 204 GIRIHLKDLRDLDDDGKPKSDDFFSEGGLKEFVQYLDSTREKLIPEPIYMDSEKGENPVQ 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +YS+ ++ Y N+I TI+GGTH+ G + +LTRTL + KS + + +SG
Sbjct: 264 VAMSYNT-SYSENVVSYVNNINTIEGGTHVAGFRRALTRTLKAYADKSGLLDKVKVEISG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN +V VD V E L YLE +P SI+
Sbjct: 323 DDFREGLTAVISVKVAEPQFEGQTKTKLGNSDVSGSVDTVVGEMLNNYLEENPKEAKSIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+VL + LPGKLADCS+ P SE+++VEGDSAGGSA
Sbjct: 383 QKVIIAAQARHAARKAREMVQRKNVLSGTGLPGKLADCSNNDPTISELYLVEGDSAGGSA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----AL 473
KQGRDR FQAILPLRGKILNVE+ E +Y+NEEI+N+I ALG+ E+ +K L
Sbjct: 443 KQGRDRNFQAILPLRGKILNVEKAQEHKIYENEEIKNMITALGVSFGTEEDEKALNMTKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HIRTL+LTFF+RY L ++G +Y+ +PPLY+++RG+ +YC+
Sbjct: 503 RYHKIIIMTDADVDGSHIRTLILTFFFRYMHALIEKGYVYIALPPLYQLKRGRDERYCWT 562
Query: 534 DAELKKVKSSFPSNAL---YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ E K+ +QR+KGLGEM P QLW TT++PE R LK++ IE AAEA+
Sbjct: 563 EEERMKLIKEMAGEGKEESVGVQRYKGLGEMNPEQLWTTTMDPENRSLKRVTIESAAEAD 622
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A +D
Sbjct: 623 HLFSMLMGDEVAPRREFIERNAKYAKVD 650
>gi|345020606|ref|ZP_08784219.1| DNA gyrase subunit B [Ornithinibacillus scapharcae TW25]
Length = 640
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 311/623 (49%), Positives = 426/623 (68%), Gaps = 20/623 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY +I+V + DNS++V DNGRGIP+D+
Sbjct: 32 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYCDHIQVIIEEDNSITVMDNGRGIPVDIQKK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K A+E ++TVLHAGGKFGG S LHGVG SVVNALS +LEV+V RDG +
Sbjct: 92 TGKPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEVSVHRDGKIHMI 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG PV L V DR GT F PD ++FT +D +T+ R+RELAFLN
Sbjct: 150 GFERGVPVKPLEV----VGETDRTGTTTHFKPDPEIFTETTTYDLDTLVQRVRELAFLNK 205
Query: 181 KLTIALRKEDSDPEKNQYNE----YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 236
+ I++ E + NE + + GG+ EYV+++N +K+ LH+ + GI +
Sbjct: 206 GIRISI-------EDKRTNEGPISFHYEGGISEYVEYINRNKEGLHEPFYAEGEDQGIAV 258
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ +D ++ ++ +AN+I T +GGTH G K LTR +N +K+ +K+ + +L+
Sbjct: 259 EVAVQY-NDGFNSSIYSFANNIHTYEGGTHESGFKTGLTRVINDYARKNGLMKESEPNLT 317
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREG+T I+SV+ P+P+FEGQTKT+LGN EVR + D E +++L +P + I
Sbjct: 318 GDDVREGITAIVSVKHPDPQFEGQTKTKLGNSEVRAITDSVFSEMFSKFLLENPSIGKII 377
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K L A +A AAK+ARDL R+KSVL S+LPGKLADCSS SE++IVEGDSAGGS
Sbjct: 378 VEKGLMASRARAAAKKARDLTRRKSVLEISNLPGKLADCSSKDASISELYIVEGDSAGGS 437
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR FQAILPLRGKILNVE+ + N E++++I A+G G+ G+DF RYH
Sbjct: 438 AKQGRDRHFQAILPLRGKILNVEKARLDRILSNNEVRSMITAMGTGI-GDDFDISKARYH 496
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KI+I+TDADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYKV++GK V Y YDD E
Sbjct: 497 KIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEHGYVYIAQPPLYKVQQGKVVHYAYDDKE 556
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
L ++ + P + +QR+KGLGEM QLWETT++PE R L Q+ + DA EA+ VF L
Sbjct: 557 LDRILAELPESPKPGLQRYKGLGEMNAEQLWETTMDPENRTLLQVELSDAIEADHVFDML 616
Query: 597 MGARVDTRKELI-QNAANLVNLD 618
MG +V+ R++ I +NA + NLD
Sbjct: 617 MGDKVEPRRQFIEENAQYVKNLD 639
>gi|169235747|ref|YP_001688947.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Halobacterium
salinarum R1]
gi|167726813|emb|CAP13599.1| DNA gyrase subunit B [Halobacterium salinarum R1]
Length = 637
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 313/618 (50%), Positives = 425/618 (68%), Gaps = 21/618 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY I+V L D SVSV D+GRGIP+ H
Sbjct: 27 MYIGSTDARGLHHLVYEVVDNSIDEALAGYCDRIDVTLHDDGSVSVTDDGRGIPVATHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V V RDG Y +
Sbjct: 87 YDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVVNALSERLAVEVSRDGARYRE 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG+PVT L V D GT IRF PD ++F T +D +T+ R+RELAFLN
Sbjct: 145 QFERGEPVTDLQH----VGDSDDSGTLIRFRPDSEIFETT-AYDFSTLENRLRELAFLNS 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D EY GG+ E+V++LN + LHD V+ F+ + DGI++++A
Sbjct: 200 GVEITLTDERGDEPTQSTFEY--EGGIREFVEYLNETRNALHDDVIYFQGEDDGISVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q D S T +AN+I T +GGTH+ G K +LTRT+N + + + D +L+G+
Sbjct: 258 MQASEDVQSSTH-AFANNINTREGGTHLTGFKTALTRTVNDYANDNNLLSELDGENLTGD 316
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+++V + L Y E +P +++
Sbjct: 317 DIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVERAVNDGLGTYFEENPATAKAVVR 376
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
++ A KA AAK+A +L R+KS L S+SLPGKLADC S PE++E+F+VEGDSAGGSAK
Sbjct: 377 TAVEAAKARKAAKKAEELTRRKSALGSTSLPGKLADCQSKAPEDAELFVVEGDSAGGSAK 436
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ FQAILPL GKILNVE+ + +++E++++I ALG G+ G++F + LRY I
Sbjct: 437 QGRNPGFQAILPLGGKILNVEKHRLDRILEHDELRHIITALGTGI-GDEFDIDELRYENI 495
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYD---D 534
I++TDADVDGAHIRTLLLTFFYR+ K L + G +Y PPLY++ RGK YD +
Sbjct: 496 IMMTDADVDGAHIRTLLLTFFYRHMKPLLEAGYVYAAQPPLYRIRYRGK----TYDAMTE 551
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
A+ +++ + +QRFKGLGEM P QLW+TT++PE R+LK++ +EDAA A+ +FS
Sbjct: 552 ADRERIVEEQCNGNPTQVQRFKGLGEMNPQQLWDTTMDPENRILKRITVEDAAAADKMFS 611
Query: 595 SLMGARVDTRKELIQNAA 612
LMG V+ RK+ IQ A
Sbjct: 612 VLMGDAVEPRKQFIQERA 629
>gi|282878003|ref|ZP_06286811.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
gi|281299838|gb|EFA92199.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
Length = 657
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/635 (47%), Positives = 424/635 (66%), Gaps = 26/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY ++IEV + D S++V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDIEVTINDDESITVQDNGRGIPVDQHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMTSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + + + + +GTR +FWPD +FTT F + IA R+RELAFLN
Sbjct: 149 EYERGKALYPVKV----IGETNLRGTRQQFWPDGSIFTTT-HFQWDIIARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLTDLRPNEEGKTRTEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + SK ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADNDPVISKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTNYLEEHPTEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 QICEKVVLAATARIAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK + K
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKIIEEGHLYIATPPLYKCTYKNKAS 562
Query: 529 QYCYDDAELKKVKSSFP-----SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
+YCY + + + + S ++++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I
Sbjct: 563 EYCYTEQQRQAFIDKYAQGEEDSKSIHT-QRYKGLGEMNPEQLWETTMDPKTRLLKQVTI 621
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AA+A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 ENAADADEIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|395646371|ref|ZP_10434231.1| DNA gyrase, B subunit [Methanofollis liminatans DSM 4140]
gi|395443111|gb|EJG07868.1| DNA gyrase, B subunit [Methanofollis liminatans DSM 4140]
Length = 664
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 321/651 (49%), Positives = 429/651 (65%), Gaps = 45/651 (6%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ + I V++ D S +V DNGRGIP+D
Sbjct: 25 MYIGSTDTRGLHHLVYEVVDNSIDEALAGFCNQISVSIGTDGSCTVVDNGRGIPVDTMK- 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L TV RDG Y
Sbjct: 84 NGKSALEVVLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSKMLRATVHRDGRVYEI 141
Query: 121 KYSRGKPVTTLTCHVLPVDS-KDR----------------------------QGTRIRFW 151
+SRG + +D K R GT I F
Sbjct: 142 TFSRGTVTEQIHSRKESLDEMKARYVRTYGAEGDWEGIEERDAFLEHFGERLSGTTISFV 201
Query: 152 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 211
PD+ +F T + FD++ +A R+RELAFLN L+I++R E S E + Y + GG+ E+V
Sbjct: 202 PDETIFET-VTFDYDVLAHRMRELAFLNSGLSISIRDERSGDE----DHYCYEGGIAEFV 256
Query: 212 QWLNTDKKPLHD-VVGF-RKDVDGIT-IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 268
+ LN + +H+ ++ F RKD + T +++A Q+ ++ + + + + NS+ T +GGTH+E
Sbjct: 257 RHLNESAEKIHENIISFDRKDEENRTEVEVAFQY-TNTFKEQVYTFVNSVNTREGGTHLE 315
Query: 269 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 328
G ++++TR +N+ KK +K+ S+ G+ VREGL +IS+++ NP+FEGQTK RLGN
Sbjct: 316 GFRSAITRAINNSAKKGNLLKN-GASVRGDDVREGLNAVISIKIANPQFEGQTKMRLGNS 374
Query: 329 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 388
VR +VD V LTE+ E +P L +I+ K+L A +A AA+ ARDL R+KS L S L
Sbjct: 375 AVRGIVDSLVYSSLTEFFEENPKTLQAIVGKALLAARAREAAQSARDLARRKSTLESGGL 434
Query: 389 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 448
PGKLADCS P +SE++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + K
Sbjct: 435 PGKLADCSERDPAKSEVYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKASPHKILK 494
Query: 449 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 508
N EIQ LI A+G GV GE F RYH+II++TDADVDGAHI TLLLTFF+RY L +
Sbjct: 495 NAEIQALISAIGTGV-GEHFDASRARYHRIILMTDADVDGAHITTLLLTFFFRYMPELIE 553
Query: 509 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 568
G IY+ PPL++V RGK+ +Y Y + ++K++ ++ + S+QR+KGLGEM QLWE
Sbjct: 554 HGYIYIAQPPLFRVARGKKEEYAYREEDMKEIMAAMGDKGV-SVQRYKGLGEMNAGQLWE 612
Query: 569 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 618
TT++P R+LKQ+ IEDA AN +F LMG V+ RKE I+ A V NLD
Sbjct: 613 TTMDPAHRVLKQVRIEDAIYANEIFEKLMGDDVEPRKEFIRRHAQEVKNLD 663
>gi|384098628|ref|ZP_09999741.1| DNA gyrase subunit B [Imtechella halotolerans K1]
gi|383835071|gb|EID74499.1| DNA gyrase subunit B [Imtechella halotolerans K1]
Length = 647
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/625 (45%), Positives = 420/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG GPRGLHHLVYE++DN++DEA AG+ I+V + DNS++V DNGRGIP+D+H
Sbjct: 31 MYIGDVGPRGLHHLVYEVVDNSIDEALAGHCDTIKVTINEDNSITVEDNGRGIPVDIHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV R+G+ + Q
Sbjct: 91 EGISALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLRATVHREGVVWEQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V + + D++GT + F PD +F +++ ++T+A R+REL++LN
Sbjct: 149 EYERGKAIYP----VKQIGTTDKRGTIVTFKPDSTIFQQTLEYSYDTLASRMRELSYLNK 204
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L E ++ F GL+E++++L+ +++P+ +V+ + + I ++
Sbjct: 205 GITITLTDRRHKKENGEFEGEVFHSQEGLKEFIRFLDGNREPIIAEVISMEGEKNDIPVE 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + S ++++ + Y N+I T +GGTH+ G + LT TL S + +SG
Sbjct: 265 VAMVYNS-SFNENLHSYVNNINTHEGGTHLAGFRRGLTTTLKKYADSSGMLDKLKFEISG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+ +I+
Sbjct: 324 DDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTAAVSQAVSEMLENYLEEHPNDARTIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+V+ LPGKL+DC+ P + E+F+VEGDSAGG+A
Sbjct: 384 QKVILAAQARHAARKAREMVQRKTVMSGGGLPGKLSDCAEQDPVKCEVFLVEGDSAGGTA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K E L
Sbjct: 444 KQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVTIGTEEDSKALNLEKL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY K L + G +++ PPLY V++G + Y ++
Sbjct: 504 RYHKVVIMCDADVDGSHIATLILTFFFRYMKELIENGHVFIATPPLYLVKKGNKKSYAWN 563
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E K++ F S + ++QR+KGLGEM QLWETT+NPE R L+Q+ I++ EA+ +F
Sbjct: 564 DKERDKLQEEFGSGS--NVQRYKGLGEMNAEQLWETTMNPEFRTLRQVTIDNGGEADRIF 621
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A +D
Sbjct: 622 SMLMGDEVPPRREFIEKNAAYAKID 646
>gi|345867569|ref|ZP_08819577.1| DNA gyrase, B subunit [Bizionia argentinensis JUB59]
gi|344047973|gb|EGV43589.1| DNA gyrase, B subunit [Bizionia argentinensis JUB59]
Length = 649
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 294/628 (46%), Positives = 424/628 (67%), Gaps = 22/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DN++DEA AG+ NI V + DNS++ D+GRGIPID+H
Sbjct: 33 MYIGDTGTRGLHHLVYEVVDNSIDEAMAGHCDNITVTINEDNSITTEDDGRGIPIDMHKK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALSE L TV+R G + Q
Sbjct: 93 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLTATVYRLGEIWEQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ V V D++GT I F PD +FT +++ ++T+A R+RELA+LN
Sbjct: 151 EYEKGKPMYP----VKKVGETDKRGTVITFKPDPTIFTHVLEYSYDTLASRMRELAYLNK 206
Query: 181 KLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
+T+ L +KED E ++ GL+E++++L+ +++PL +V+ F + +G+
Sbjct: 207 GITVHLVDKRHKKEDGTFEGETFHS---KEGLKEFIKFLDGNREPLTKEVIAFEGEKNGV 263
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+ + + +Y++ + Y N+I T +GGTH+ G + LT TL +S +
Sbjct: 264 PVEVAMIYNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKYADESGMLDKLKFD 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE +P+
Sbjct: 323 IAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSASVSQAVSEMLTDYLEENPEDAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ K + A +A AA++AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAG
Sbjct: 383 IIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQDPAKCEVFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK---- 470
G+AKQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K
Sbjct: 443 GTAKQGRDRAFQAILPLRGKILNVEKAMTHRVFENEEIKNIYTALGVTIGTEEDSKALNL 502
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
LRYHK++I+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + +Y
Sbjct: 503 SKLRYHKVVIMCDADIDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLVKKGARKKY 562
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ D E ++ + + + IQR+KGLGEM QLW+TT+NPE R L+Q+ I++ AEA+
Sbjct: 563 AWSDQERSEIMAEYGDGS--KIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVQIDNGAEAD 620
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A N+D
Sbjct: 621 RIFSMLMGDEVPPRREFIEKNAIYANID 648
>gi|289579993|ref|YP_003478459.1| DNA gyrase subunit beta [Natrialba magadii ATCC 43099]
gi|448281231|ref|ZP_21472538.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
gi|289529546|gb|ADD03897.1| DNA gyrase, B subunit [Natrialba magadii ATCC 43099]
gi|445579161|gb|ELY33557.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
Length = 643
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/616 (48%), Positives = 419/616 (68%), Gaps = 11/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ I V++ D+S+SVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINEDDSISVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALS LE TV RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLETTVKRDGGVYEH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+ G+P+ + V ++ + GT I+FWPD +F TT + F +T++ R+RELAFLN
Sbjct: 145 AFEIGEPIGDME-RVRDMEPDEETGTEIQFWPDDDIFETTDMSF--STLSNRLRELAFLN 201
Query: 180 PKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I LR E E + Y + GG+ E+V++LN + +H D++ F + + +
Sbjct: 202 SGVRITLRDERERTEDGEAVAETYEYEGGIREFVEYLNETRSAMHEDIIYFEDEDQNVRV 261
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D + +L
Sbjct: 262 EVAMQ-ATQELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYGNENNLLSDIEENLK 320
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E HPD +I
Sbjct: 321 GEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDCLGTYFEEHPDTAQAI 380
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGS
Sbjct: 381 VMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGS 440
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY
Sbjct: 441 AKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYK 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + D E
Sbjct: 500 KIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDVE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS L
Sbjct: 560 RDEIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVL 619
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I+ A
Sbjct: 620 MGDAVEPRKQFIKENA 635
>gi|365960414|ref|YP_004941981.1| DNA gyrase subunit B [Flavobacterium columnare ATCC 49512]
gi|365737095|gb|AEW86188.1| DNA gyrase subunit B [Flavobacterium columnare ATCC 49512]
Length = 646
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/625 (48%), Positives = 414/625 (66%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DN++DEA G+ I V + DNS++V DNGRGIP+D+H
Sbjct: 30 MYIGDTGVRGLHHLVYEVVDNSIDEALGGHCDTIFVTINEDNSITVEDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+R+G Y Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKATVYREGKIYEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK V + + D++GT + F PD +F +++ ++T+A R+RELAFLN
Sbjct: 148 EYERGKA----QYPVKQIGTTDKRGTTVWFKPDGTIFQQTLEYSYDTLAARMRELAFLNK 203
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L K D E E F + GL+E+V++L+ ++ P+ V+ D I ++
Sbjct: 204 GITITLTDKRGQDKEGKYLGETFHSKEGLKEFVKFLDGNRVPIIGHVISMENDKGEIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + +D+YS+ + Y N+I T +GGTH++G + LTRTL S + +SG
Sbjct: 264 VALIY-NDSYSENIFSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGLLDKLKFEISG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ I+
Sbjct: 323 DDFREGLTAIISVKVAEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEENPNDAKIIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AAK+AR++V++K+V+ LPGKL+DCS P + EIF+VEGDSAGG+A
Sbjct: 383 QKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDCSEQDPTKCEIFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ V D K E L
Sbjct: 443 KQGRDRNFQAILPLRGKILNVEKAMHHKVFENEEIRNIFTALGVTVGTADDSKALNLEKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DAD+DG+HI TL+LTFF+R+ K L +EG +Y+ PPLY V++G + +Y +D
Sbjct: 503 RYHKVVIMCDADIDGSHISTLILTFFFRFMKELIEEGHVYIATPPLYLVKKGNKKEYAWD 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ + + A +IQR+KGLGEM QLWETTLNP R L+Q+ I+ EA+ VF
Sbjct: 563 EKQRDAINEKMGGGA--NIQRYKGLGEMNAEQLWETTLNPGYRTLRQVTIDSLTEADRVF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 621 SMLMGDEVPPRREFIEKNAIYANID 645
>gi|23097461|ref|NP_690927.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831]
gi|22775684|dbj|BAC11962.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831]
Length = 641
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/619 (49%), Positives = 422/619 (68%), Gaps = 12/619 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN++DEA AGY +I+V + DNS++V DNGRGIP+D+
Sbjct: 33 MYIGSTSEKGLHHLVWEIVDNSIDEALAGYCDHIQVVVEEDNSITVKDNGRGIPVDIQQK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + ALE ++TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +
Sbjct: 93 TGRPALEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSELEVYVHRDGKVHFL 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ +G P + + D GT F PD ++FT +++ +T+ R+RELAFLN
Sbjct: 151 SFKKGVPDGEIKV----IGDTDITGTVTHFRPDTEIFTETTEYNFDTLEQRLRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L I++ + +D E+ Y+ + GG+ YV+++N +K+ LH+ + GI++++A+
Sbjct: 207 GLKISIEDKRTDREQVTYH---YEGGISSYVEFINKNKEVLHEPFFAEGEDQGISVEVAI 263
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 300
Q+ +D ++ + +AN+I T +GG+H G ++ LTR +N KK+ +KD D +LSG+ V
Sbjct: 264 QY-NDGFASNLYSFANNIHTYEGGSHEVGFRSGLTRIINDYAKKNGLIKDGDSNLSGDDV 322
Query: 301 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 360
REG+T I+S++ P+P+FEGQTKT+LGN EVR + D E +++L +P I+ K
Sbjct: 323 REGMTTIVSIKHPDPQFEGQTKTKLGNSEVRAITDGVFSEAFSKFLYENPSTAKIIVEKG 382
Query: 361 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 420
L A +A LAAK+AR+L R+KS L S+LPGKLADCSS SE++IVEGDSAGGSAK G
Sbjct: 383 LMASRARLAAKKARELTRRKSNLEISNLPGKLADCSSRDAAISELYIVEGDSAGGSAKSG 442
Query: 421 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 480
RDR FQAILPLRGKILNVE+ + N E++ +I ALG GV GE+F RYHKI+I
Sbjct: 443 RDRHFQAILPLRGKILNVEKARLDRILSNNEVRAMITALGSGV-GEEFDISKARYHKIVI 501
Query: 481 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 540
+TDADVDGAHIRTLLLTFFYRY + L ++G IY+ PPLY+V++GK V Y Y+D EL ++
Sbjct: 502 MTDADVDGAHIRTLLLTFFYRYMRPLIEQGYIYIAQPPLYQVKQGKTVNYAYNDKELDRI 561
Query: 541 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 600
+ P +IQR+KGLGEM QLW+TT++P+ R L Q+ + DA +A+ VF LMG +
Sbjct: 562 LNEIPKAPKPNIQRYKGLGEMNADQLWDTTMDPDTRTLLQVELSDAIDADQVFDMLMGDK 621
Query: 601 VDTRKELI-QNAANLVNLD 618
V+ R+ I +NA + NLD
Sbjct: 622 VEPRRIFIEENAQYVKNLD 640
>gi|429740969|ref|ZP_19274638.1| DNA gyrase, B subunit [Porphyromonas catoniae F0037]
gi|429159638|gb|EKY02135.1| DNA gyrase, B subunit [Porphyromonas catoniae F0037]
Length = 653
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 415/627 (66%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY ++I+V + DNS+ V DNGRGIP+D+H
Sbjct: 34 MYIGDIGEKGLHHLVYEVVDNSIDEALAGYCNDIKVIIHEDNSIEVQDNGRGIPVDIHEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS L+ V RDG Y +
Sbjct: 94 EGKSALEVVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTYLKAIVHRDGKIYTE 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+G P T L + + DR GT I F PD +F+ ++ ++ R+RELAFLN
Sbjct: 152 EFSQGVPTTDLQT----IGTTDRTGTTIIFKPDDTIFSVT-EYQFKILSNRLRELAFLNA 206
Query: 181 KLTIALRKEDS-DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+T+ L E D E E Y+ GL+E+ ++++ K+ L DV+ + GI ++
Sbjct: 207 GITLTLVDERVVDEEGKPLTEVYYSQDGLKEFAKYIDRSKEHLVDDVIHIVTEKQGIPVE 266
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + +Y++ + Y N+I TI+GGTH+ G + LTRTL SK + + ++G
Sbjct: 267 VAMTYNT-SYNENIYSYVNNINTIEGGTHLAGFRRGLTRTLKKYATDSKLLDKVKVEITG 325
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV VD +V E L YLE HP I+
Sbjct: 326 DDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVMGAVDIAVSEALETYLEEHPKEAKVIV 385
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A A AA++AR++V++KS L LPGKLADCSS P SE+F+VEGDSAGG+A
Sbjct: 386 DKVILAATARQAARKAREMVQRKSPLSGGGLPGKLADCSSKDPVLSELFLVEGDSAGGTA 445
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----AL 473
KQGRDR FQAILPLRGKILNVE+ + + ++EEI+N+ ALG+ + E+ KE L
Sbjct: 446 KQGRDREFQAILPLRGKILNVEKAMQHKVLESEEIRNIYTALGVTIGTEEDAKELNLAKL 505
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK+II+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY RGK+ +YC+
Sbjct: 506 RYHKVIIMTDADVDGSHIATLILTFFFRNMRSLIENGYVYIATPPLYLCTRGKEKEYCWT 565
Query: 534 DAELKKV--KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + + + +QR+KGLGEM QLWETT+NPE R L+++ IE+AAEA+
Sbjct: 566 EQQRQAFIDRVGGGDEKRVHVQRYKGLGEMNDEQLWETTMNPENRTLRKITIENAAEADA 625
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A +D
Sbjct: 626 IFSMLMGDEVAPRREFIEANATYARID 652
>gi|303235765|ref|ZP_07322372.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
gi|302484212|gb|EFL47200.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
Length = 683
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/633 (48%), Positives = 421/633 (66%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY S+IEV + DNS++V D+GRGIP+D H
Sbjct: 58 MYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINEDNSITVEDDGRGIPVDEHEK 117
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q
Sbjct: 118 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMMSQVFRNGKIYQQ 175
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ ++ V D+ GTR +FWPD +FTT I + + +A R+RELAFLN
Sbjct: 176 EYEKGKPLYSVKI----VGDTDKTGTRQQFWPDASIFTTTI-YQWDIVARRMRELAFLNA 230
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 231 GIKITLTDLRPNEEGKTKQEVFHAQEGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 290
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ I
Sbjct: 291 AIMYNND-YNENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDTQIAKQIEKAKIE 349
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P
Sbjct: 350 ITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPAEAK 409
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P+E EIF+VEGDSAG
Sbjct: 410 LICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAG 469
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK-- 469
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GE DF+
Sbjct: 470 GSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVDGESDFEAN 529
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +
Sbjct: 530 TDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTFKKVSE 589
Query: 530 YCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
YCY + + L+K N QR+KGLGEM P QLW+TT+NP+ R+LKQ+ IE+
Sbjct: 590 YCYTEQQRLQFLEKYVGGDEENKALHTQRYKGLGEMNPEQLWDTTMNPKTRLLKQVTIEN 649
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 650 ATTADEMFSMLMGDDVEPRREFIEQNATYANID 682
>gi|257783820|ref|YP_003179037.1| DNA gyrase subunit B [Atopobium parvulum DSM 20469]
gi|257472327|gb|ACV50446.1| DNA gyrase, B subunit [Atopobium parvulum DSM 20469]
Length = 647
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 312/638 (48%), Positives = 418/638 (65%), Gaps = 33/638 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T GLHHLV+EI+DN+VDEA AGY S I+V + DNS+SV DNGRGIP+DLHP
Sbjct: 27 MYIGTTSASGLHHLVWEIVDNSVDEAMAGYCSKIKVTIHPDNSISVEDNGRGIPVDLHPQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE VLT+LHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L V RDG Y
Sbjct: 87 KKIPTLEVVLTILHAGGKF--DNNAYKVSGGLHGVGVSVVNALSKKLVAQVKRDGKIYEM 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+ RGK V + + + GT I FWPD +F TT FD T+ R++E AFLN
Sbjct: 145 VFERGKTVQKMK----EIGTSKSNGTTITFWPDDMIFETTTYNFD--TLRDRLQETAFLN 198
Query: 180 PKLTIALRKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDK-------KPLHDVVGFRKDV 231
L I L E + P + + +AGG+ ++V++LN +K +P++ + + D
Sbjct: 199 KNLKITLVDERELTPRQVDFQ---YAGGIIDFVKYLNDEKTVLPGLSRPIY--IEGKSDP 253
Query: 232 DGIT-----IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSK 286
D +++A+QW +D +SD L +AN I T +GG H+EG + +LT+ +N G +
Sbjct: 254 DAPMSQMGEVEVAIQWNTD-FSDRTLSFANDIFTEEGGMHLEGFRTALTKVVNDYGTRQG 312
Query: 287 TVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYL 346
+K+KD L G +REGLT +ISV++P+P+FEGQTK +LG+ +R + ++ V + L+EYL
Sbjct: 313 ILKEKDPKLEGGDIREGLTAVISVKLPDPQFEGQTKAKLGSSYMRTLTNKIVTQGLSEYL 372
Query: 347 ELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 406
E HP+ IL K+ A K LAA++AR+ R+K +L S++LPGKLADCS E +E+F
Sbjct: 373 EEHPNQAKEILKKASQAAKGRLAARKAREATRRKGLLESAALPGKLADCSVRDAEMTELF 432
Query: 407 IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGE 466
IVEGDSAGGSAK RDR QA+LPLRGKILNVER ++ I +LI A+G GV G+
Sbjct: 433 IVEGDSAGGSAKMARDRSIQAVLPLRGKILNVERVQAHRALSSDTITSLITAIGTGV-GD 491
Query: 467 DFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RG 525
+F E RYHKI+I+TDADVDG+HIR LLLTFFYRY K + D G IYV PPLY+++ +G
Sbjct: 492 EFSLEKARYHKIVIMTDADVDGSHIRILLLTFFYRYMKPMIDAGYIYVAQPPLYQIKPKG 551
Query: 526 KQV-QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
K+ +Y Y D EL F N Y+IQR+KGLGEM P QLW TT+ P+ R+L ++ I+
Sbjct: 552 KKNGKYIYTDEELALETKKFEDNTKYTIQRYKGLGEMDPEQLWATTMEPKNRILLKVTID 611
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
DA A+ S LMG +V+ RK+ IQ A V LDI
Sbjct: 612 DALAADRAVSDLMGNQVEKRKDFIQTHAKDVRF--LDI 647
>gi|317504159|ref|ZP_07962158.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
gi|315664735|gb|EFV04403.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
Length = 656
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/634 (47%), Positives = 423/634 (66%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY +++E+ L D SV+V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCTDVEITLNEDGSVTVEDNGRGIPVDEHKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V ++GTR +FWPD +FTT + + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----VGETTKRGTRQQFWPDPTIFTTTT-YKWDIVASRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L D E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLTDMRHDEEGKIRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I
Sbjct: 264 AIMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKAYADAEPTIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P+E EIF+VEGDSAG
Sbjct: 383 KICEKVVLAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCTYKKVSE 562
Query: 530 YCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
YCY + + K V L++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I+
Sbjct: 563 YCYTEQQRQAFIDKYVDGKEDDKGLHT-QRYKGLGEMNPEQLWETTMDPKSRLLKQVTIQ 621
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 NAAEADEIFSMLMGDDVEPRREFIEQNATYANID 655
>gi|448603022|ref|ZP_21656843.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
gi|445746218|gb|ELZ97680.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
Length = 639
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 310/615 (50%), Positives = 419/615 (68%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEFGEPQVDQFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L E +D + + + F GG+ E+V++LN K LHD ++ + + +GI +++A
Sbjct: 204 GVEISLTDERTD----ESSSFRFEGGIREFVEYLNETKTALHDDIIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P +SE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSKSELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|418689258|ref|ZP_13250380.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
gi|400361403|gb|EJP17369.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
Length = 639
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 296/620 (47%), Positives = 420/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYERGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|170760652|ref|YP_001785341.1| DNA gyrase subunit B [Clostridium botulinum A3 str. Loch Maree]
gi|169407641|gb|ACA56052.1| DNA gyrase, B subunit [Clostridium botulinum A3 str. Loch Maree]
Length = 637
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 437/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV + DNS++V D+GRG+P+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++T+LHAGGKFGG S LHGVG SVVNALSE EV V R+G + Q
Sbjct: 89 VKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCEVEVRREGHIWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN
Sbjct: 147 KFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD-ELEFEYDTLAQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I+L E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A
Sbjct: 202 GIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+
Sbjct: 258 MQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDIDKNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K
Sbjct: 317 VREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQ
Sbjct: 377 GLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F + +RY++II
Sbjct: 437 GRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFDIDKIRYNRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIFKAKKEIYVYSDPELDE 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +IQR+KGLGEM P QLW+TT+NPE R L Q+ IEDA A+ +F+ LMG
Sbjct: 556 ALLELGGKDTNTNIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVTIEDAMAADEIFTILMG 615
Query: 599 ARVDTRKELIQ-NAANLVNLD 618
+V+ R+E I+ NA +VNLD
Sbjct: 616 TKVEPRREFIEDNADKVVNLD 636
>gi|417767171|ref|ZP_12415116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417770211|ref|ZP_12418121.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418684138|ref|ZP_13245327.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418705137|ref|ZP_13266002.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418713024|ref|ZP_13273751.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|418724755|ref|ZP_13283564.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|421117277|ref|ZP_15577640.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421124386|ref|ZP_15584643.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135176|ref|ZP_15595301.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|24753767|gb|AAN64015.1|AF434658_12 DNA gyrase subunit B [Leptospira interrogans]
gi|321401258|gb|ADW83040.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401262|gb|ADW83042.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401266|gb|ADW83044.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401270|gb|ADW83046.1| DNA gyrase subunit B [Leptospira interrogans]
gi|400324101|gb|EJO76401.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400350290|gb|EJP02554.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|409947765|gb|EKN97759.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409962076|gb|EKO25818.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|410010988|gb|EKO69116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020594|gb|EKO87394.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437517|gb|EKP86616.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410764988|gb|EKR35690.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410790107|gb|EKR83801.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|455668938|gb|EMF34110.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 639
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 296/620 (47%), Positives = 420/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYERGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|295135619|ref|YP_003586295.1| DNA gyrase subunit B [Zunongwangia profunda SM-A87]
gi|294983634|gb|ADF54099.1| DNA gyrase subunit B [Zunongwangia profunda SM-A87]
Length = 646
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 293/625 (46%), Positives = 418/625 (66%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DN++DEA AG+ I+V + DNS++V DNGRGIPIDLH
Sbjct: 30 MYIGDTGVRGLHHLVYEVVDNSIDEALAGHCDAIKVDINEDNSITVEDNGRGIPIDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS L+ TV+RDG + Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSTHLKATVYRDGQIWEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V PV + GT + F PD +F +++ + T+A R+RELAFLN
Sbjct: 148 EYEIGKPMYP----VKPVGETELSGTIVTFKPDPSIFQQTLEYSYETLAKRMRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I L + EK ++ E+ GL+E++++L+ ++P+ DV+ + +GI ++
Sbjct: 204 GIRIVLTDKREKDEKGEFLSEEFHSEEGLKEFIRFLDGTREPIIADVISMEGEKNGIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + +D +++ + Y N+I T +GGTH+ G + LT TL S ++ ++G
Sbjct: 264 VALVY-NDTFNENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGLLEKVKFEVTG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ +I+
Sbjct: 323 DDFREGLTAIISVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPNDAKTIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AAK+AR++V++K+ + LPGKL+DCS P++ E+F+VEGDSAGG+A
Sbjct: 383 QKVILAAQARNAAKKAREMVQRKTAMSIGGLPGKLSDCSEQDPKKCEVFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ ++ NEEI+N+ ALG+ + E+ K L
Sbjct: 443 KQGRDRNFQAILPLRGKILNVEKAMSHRVFDNEEIKNIYTALGVTIGTEEDSKALNLSKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+ DADVDG+HI TL+LTFF+RY K L ++G IY+ PPLY V++G + +Y ++
Sbjct: 503 RYHKIVIMCDADVDGSHIETLILTFFFRYMKELIEQGHIYIATPPLYLVKKGSKKRYAWN 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ E ++ + IQR+KGLGEM QLW+TT++PE+R L+Q+ I+++ EA+ +F
Sbjct: 563 EKERDEIADEYSGG--IQIQRYKGLGEMNAEQLWDTTMDPERRKLRQVTIDNSGEADRIF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 621 SMLMGDEVPPRREFIEKNAKYANID 645
>gi|229496104|ref|ZP_04389826.1| DNA gyrase, B subunit [Porphyromonas endodontalis ATCC 35406]
gi|229317000|gb|EEN82911.1| DNA gyrase, B subunit [Porphyromonas endodontalis ATCC 35406]
Length = 653
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/627 (48%), Positives = 418/627 (66%), Gaps = 17/627 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY ++++V +L DNS+SV DNGRGIP+D+HP
Sbjct: 34 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCTDVKVTILEDNSISVEDNGRGIPVDIHPK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS L V+RDG + Q
Sbjct: 94 EGRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHLRADVYRDGKHFVQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S+GKP+ + V DR GT + F PD +FT +I + +A R+RELAFLN
Sbjct: 152 EFSKGKPLYS----VKEEGESDRTGTTVTFTPDNSIFTVSI-YQFKILAHRLRELAFLNA 206
Query: 181 KLTIALRK-EDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITID 237
L ++L + D E N E F++ GL+E+V++++ K L DV+ + D + I+
Sbjct: 207 GLRLSLTDLRERDEEGNPLTEVFYSEDGLKEFVRFIDQSKVNLLDDVIHIKNDKGEVPIE 266
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + D Y + + Y N I TI+GGTH+ G + +LTRTL SK ++ +++ G
Sbjct: 267 VAMTYNQD-YQENVYSYVNDINTIEGGTHLTGFRRALTRTLKQYATDSKMLEKVKVNVEG 325
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +IS++V P+FEGQTKT+LGN EV +V+ +V E L YLE HP +I+
Sbjct: 326 DDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVIGIVESAVSEALAIYLEEHPQQAKAIV 385
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA AR LV +KS L + LPGKL+DC+S P + EIF+VEGDSAGG+A
Sbjct: 386 DKVVLAAQARHAAANARKLVLRKSPLAAGGLPGKLSDCTSKDPAKCEIFLVEGDSAGGTA 445
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR +QAILPLRGKILNVE+ + + ++EI+N+ ALG+ + E+ K L
Sbjct: 446 KQGRDRMYQAILPLRGKILNVEKAMQHKVLDSQEIRNIYTALGVTIGTEEDSKALNLSKL 505
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKIII+TDADVDG+HI TL+LTFF+R ++L D G +Y+ PPLY +GK+ YC+
Sbjct: 506 RYHKIIIMTDADVDGSHIATLILTFFFRNMRSLIDNGYVYLATPPLYLCRKGKEQAYCWT 565
Query: 534 DAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 591
+ + + + + + +QR+KGLGEMM QLWETT+NP+ R+LKQ+ IE AA A+
Sbjct: 566 EQQRRAFIDKYADGNESRVHVQRYKGLGEMMEEQLWETTMNPDNRILKQITIESAASADR 625
Query: 592 VFSSLMGARVDTRKELIQNAANLVNLD 618
FS LMG V R+E I++ A +D
Sbjct: 626 TFSMLMGEDVPPRREFIEDNATYARID 652
>gi|94471626|gb|ABF21079.1| DNA gyrase subunit B [Acholeplasma hippikon]
Length = 599
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/599 (50%), Positives = 398/599 (66%), Gaps = 15/599 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA AGYA+ + + +L DN + V DNGRGIP+D+HP
Sbjct: 15 MYIGSTGERGLHHLVWEIVDNSIDEALAGYANEVNIEILPDNIIKVRDNGRGIPVDIHPK 74
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ET+LT LHAGGKF S Y VSGGLHGVG SVVN LS V + +DG Y Q
Sbjct: 75 TGRPAVETILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSLWYLVQIHKDGKIYEQ 132
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P L + + GT F D +FT +++ T+ R+++LAFLN
Sbjct: 133 KYERGIPAYDLR----EIGTTTETGTETTFLADPLIFTETTVYNYETLRNRVQQLAFLNK 188
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ + L ED E E+ + GG+ EY+Q LN K +H D + K+ DG+T+++A
Sbjct: 189 GIKLTL--EDKRIEHPMKEEFHYEGGIVEYIQHLNQSKSKIHQDAIYIDKEQDGVTVEIA 246
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ D Y+ + + N+I T +GG H +G K +LTR ++ ++ KD ++SGE
Sbjct: 247 LQYV-DTYTPNIYSFTNNINTTEGGMHEDGFKLALTRVISKYADDNQLKKDD--AISGED 303
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P P+FEGQTKT+LGNPEVR + Q E L +L +P+ I+ K
Sbjct: 304 TREGLTAIISVKHPEPQFEGQTKTKLGNPEVRAIASQITSEALERFLLENPNQAKLIVEK 363
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA +A +AA++A++L R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQ
Sbjct: 364 VISATRARVAARKAKELARRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQ 423
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAI+PLRGK+LNVE+ M N+EI NLI+A G G+ G++F LRYHKI+
Sbjct: 424 GRDSEFQAIMPLRGKVLNVEKVRFDKMLNNKEIVNLIQAFGTGI-GDEFDINKLRYHKIV 482
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +R+ K L + G +Y PPLYKV GK +QY Y D +L
Sbjct: 483 IMTDADVDGAHIRTLLLTFLFRHFKPLIEHGYVYAAQPPLYKVSYGKNIQYAYSDEQLNT 542
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +S SIQR+KGLGEM QLWETT++P R L Q+ +EDA EA+ VFS LMG
Sbjct: 543 ILASIEGKP--SIQRYKGLGEMNYEQLWETTMDPAARTLLQIKLEDAIEADQVFSMLMG 599
>gi|257054095|ref|YP_003131927.1| DNA gyrase subunit B [Saccharomonospora viridis DSM 43017]
gi|256583967|gb|ACU95100.1| DNA gyrase subunit B [Saccharomonospora viridis DSM 43017]
Length = 654
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/638 (47%), Positives = 433/638 (67%), Gaps = 32/638 (5%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHL+ E++DN+VDEA AGYAS +EV LLAD V V D+GRGIP++ HP
Sbjct: 28 MYIGSTGVRGLHHLIQEVVDNSVDEAMAGYASRVEVTLLADGGVRVVDDGRGIPVEPHPV 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E VLT LHAGGKF S Y+VSGGLHGVG+SVVNALS +LEV + RDG + Q
Sbjct: 88 HGKPTVEIVLTQLHAGGKF--DSDSYAVSGGLHGVGVSVVNALSSALEVEIHRDGRIWAQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y P ++ DR GT + FW D ++F T +++ T+A R++E+AFLN
Sbjct: 146 RYENSVP-----GELVDKGPTDRSGTSVTFWADPEIFETT-EYNAETVARRLQEMAFLNK 199
Query: 181 KLTIALRKE--------DSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRK 229
LT+ LR E D+ E+ Q E Y++ GGLE++V+++N ++ +H V+ F +
Sbjct: 200 GLTMILRDERVTDEEGEDATGERAQLKERTYYYPGGLEDFVKYINASREAIHPSVISFEQ 259
Query: 230 DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK 289
DG+ +++A+QW +D Y+ ++ +AN+I T +GGTH EG +A+LTR +N+ + K +K
Sbjct: 260 KGDGLEVEVAMQW-NDGYTPSVYTFANTINTHEGGTHEEGFRAALTRVVNAYARDKKLLK 318
Query: 290 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 349
+KD +L+G+ VREGL I+S+++ P+FEGQTKT+LGN E R V + E+L ++ E +
Sbjct: 319 EKDANLTGDDVREGLAAIVSIKLTEPQFEGQTKTKLGNSEARSFVQTACNEWLADWFERN 378
Query: 350 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 409
P I++K++S+ +A LAA++ARDLVR+K + LPGKL DC S PEE E++IVE
Sbjct: 379 PTEAKLIINKAVSSAQARLAARKARDLVRRKGAMDIGGLPGKLKDCRSNDPEECELYIVE 438
Query: 410 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFK 469
GDSAGGSAK+GRD RFQAILP+RGKI+NVE+ + KN+E+Q+LI ALG G+ +DF
Sbjct: 439 GDSAGGSAKEGRDSRFQAILPIRGKIINVEKARIDKVLKNQEVQSLITALGTGIH-DDFD 497
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QV 528
LRYHKI+I+ DADVDG HIRTLLLT +R+ + L ++G +Y+ PPLYK++ + +
Sbjct: 498 ISKLRYHKIVIMADADVDGQHIRTLLLTLLFRFMRPLVEQGHVYLAQPPLYKIKWPRMEP 557
Query: 529 QYCYDDAEL-------KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQL 581
QY Y D E + P + IQR+KGLGEM +LWETT++P R+L Q+
Sbjct: 558 QYAYSDRERDGLLRAGAEAGRKLPKDD--GIQRYKGLGEMNAEELWETTMDPSNRVLLQV 615
Query: 582 VIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 618
++DAA+A+ +FS LMG V+ R+ I +NA + LD
Sbjct: 616 TLDDAAQADELFSVLMGEDVEARRSFITRNAKGVQFLD 653
>gi|340621962|ref|YP_004740414.1| DNA gyrase subunit B [Capnocytophaga canimorsus Cc5]
gi|339902228|gb|AEK23307.1| DNA gyrase subunit B [Capnocytophaga canimorsus Cc5]
Length = 652
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 298/631 (47%), Positives = 422/631 (66%), Gaps = 22/631 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AGY I V + +NS++V DNGRGIP+D+H
Sbjct: 30 MYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTISVTINENNSITVEDNGRGIPVDIHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+T + AGGKF S Y VSGGLHGVG+S VNALS L V+RDG + Q
Sbjct: 90 EGVSALQVVMTKIGAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHLTAVVYRDGKIWQQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V V ++GT + F PD +F +++ ++T+A R+RELAFLN
Sbjct: 148 EYERGK----VLYPVKQVGDTQKRGTTVTFQPDDLIFQQTLEYKYDTLATRMRELAFLNR 203
Query: 181 KLTIALRKEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L + E ++ +E F++ GL+E++++L+ ++ + +V+ + + I ++
Sbjct: 204 GITITLTDKREREENGEFKSETFYSENGLKEFIRYLDGNRPAIISNVIAMEGEKNEIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL----NSLGKKSKTVKDKD- 292
+A+ + +D+YS+ + Y N+I T +GGTH+EG + LTRTL +S G K KDK
Sbjct: 264 VAMVY-NDSYSENLHSYVNNINTHEGGTHLEGFRRGLTRTLKKYADSSGLLEKMSKDKKN 322
Query: 293 -ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 351
+ +SGE REGLT I+SV+V P+FEGQTKT+LGN EV VV Q+V E L YLE HP+
Sbjct: 323 PVQISGEDFREGLTAIVSVKVAEPQFEGQTKTKLGNSEVLAVVSQAVSEMLEAYLEEHPN 382
Query: 352 VLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
I+ K + A +A AA++AR+LV++K+V+ LPGKL+DCS PE EIF+VEGD
Sbjct: 383 DAKVIVEKVIIAAQARHAARKARELVQRKTVMSGGGLPGKLSDCSEQNPELCEIFLVEGD 442
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK- 470
SAGG+AKQGRDR FQAILPL+GKILNVE+ ++ +EEI+N+ ALG+ + ED K
Sbjct: 443 SAGGTAKQGRDRNFQAILPLKGKILNVEKAMHHKVFDSEEIKNIFTALGVTIGTEDDAKA 502
Query: 471 ---EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ 527
E LRYHK++I+ DADVDG+HI TL+LTFF+RY + L ++G +Y+ PPLY V++G +
Sbjct: 503 LNLEKLRYHKVVIMCDADVDGSHITTLILTFFFRYMRDLIEKGYVYIATPPLYLVKKGNK 562
Query: 528 VQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 587
Y ++D E + + +IQR+KGLGEM QLWETT+NP+ R L+Q+ IE+ +
Sbjct: 563 KAYAWNDKERDALSEEYGQGT--NIQRYKGLGEMNAEQLWETTMNPQFRTLRQVTIENGS 620
Query: 588 EANVVFSSLMGARVDTRKELIQNAANLVNLD 618
EA+ +FS LMG V R+E I+ A +D
Sbjct: 621 EADRIFSMLMGDDVPPRREFIEKNAKYAKID 651
>gi|15790024|ref|NP_279848.1| DNA gyrase subunit B [Halobacterium sp. NRC-1]
gi|10580452|gb|AAG19328.1| DNA gyrase subunit B [Halobacterium sp. NRC-1]
Length = 611
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/614 (50%), Positives = 420/614 (68%), Gaps = 13/614 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY I+V L D SVSV D+GRGIP+ H
Sbjct: 1 MYIGSTDARGLHHLVYEVVDNSIDEALAGYCDRIDVTLHDDGSVSVTDDGRGIPVATHEE 60
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ A+E +LTVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V V RDG Y +
Sbjct: 61 YDRPAVEVILTVLHAGGKFDAKS--YQVSGGLHGVGVSVVNALSERLAVEVSRDGARYRE 118
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG+PVT L V D GT IRF PD ++F T +D +T+ R+RELAFLN
Sbjct: 119 QFERGEPVTDLQH----VGDSDDSGTLIRFRPDSEIFETT-AYDFSTLENRLRELAFLNS 173
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I L E D EY GG+ E+V++LN + LHD V+ F+ + DGI++++A
Sbjct: 174 GVEITLTDERGDEPTQSTFEY--EGGIREFVEYLNETRNALHDDVIYFQGEDDGISVEIA 231
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q D S T +AN+I T +GGTH+ G K +LTRT+N + + + D +L+G+
Sbjct: 232 MQASEDVQSSTH-AFANNINTREGGTHLTGFKTALTRTVNDYANDNNLLSELDGENLTGD 290
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+++V + L Y E +P +++
Sbjct: 291 DIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVERAVNDGLGTYFEENPATAKAVVR 350
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
++ A KA AAK+A +L R+KS L S+SLPGKLADC S PE++E+F+VEGDSAGGSAK
Sbjct: 351 TAVEAAKARKAAKKAEELTRRKSALGSTSLPGKLADCQSKAPEDAELFVVEGDSAGGSAK 410
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGR+ FQAILPL GKILNVE+ + +++E++++I ALG G+ G++F + LRY I
Sbjct: 411 QGRNPGFQAILPLGGKILNVEKHRLDRILEHDELRHIITALGTGI-GDEFDIDELRYENI 469
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLTFFYR+ K L + G +Y PPLY++ +A+ +
Sbjct: 470 IMMTDADVDGAHIRTLLLTFFYRHMKPLLEAGYVYAAQPPLYRIRYRGNTYDAMTEADRE 529
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT++PE R+LK++ +EDAA A+ +FS LMG
Sbjct: 530 RIVEEQCNGNPTQVQRFKGLGEMNPQQLWDTTMDPENRILKRITVEDAAAADKMFSVLMG 589
Query: 599 ARVDTRKELIQNAA 612
V+ RK+ IQ A
Sbjct: 590 DAVEPRKQFIQERA 603
>gi|126662002|ref|ZP_01733001.1| DNA gyrase, B subunit [Flavobacteria bacterium BAL38]
gi|126625381|gb|EAZ96070.1| DNA gyrase, B subunit [Flavobacteria bacterium BAL38]
Length = 646
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/625 (47%), Positives = 421/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DN++DEA AG+ I VA+ DNS++V DNGRGIP+DLH
Sbjct: 30 MYIGDTGVRGLHHLVYEVVDNSIDEALAGHCDTIYVAINEDNSITVEDNGRGIPVDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G Y Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLRATVYREGKVYEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V + + +++GT + F PD +FT +++ ++T+A R+REL+FLN
Sbjct: 148 EYERGKAMYP----VKQIGTTEKRGTMVTFKPDATIFTQTLEYSYDTLASRLRELSFLNK 203
Query: 181 KLTIALR-KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L K + +Q E F + GL+E+V++L+ +++P+ V+ + I ++
Sbjct: 204 GITITLTDKRHLAEDGSQPVETFHSKEGLKEFVKFLDGNREPIISHVISMEHEKSEIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+AL + + +Y++ + Y N+I T +GGTH++G + LTRTL S + +SG
Sbjct: 264 VALIYNT-SYTENIFSYVNNINTHEGGTHLQGFRMGLTRTLKKYADSSGLLDKLKFEISG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ I+
Sbjct: 323 DDFREGLTAIISVKVQEPQFEGQTKTKLGNREVVSPVSQAVSEMLENYLEENPNDAKIIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AAK+AR++V++K+V+ LPGKL+DCS P + EIF+VEGDSAGG+A
Sbjct: 383 QKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDCSEQDPAKCEIFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EAL 473
KQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + ED K E L
Sbjct: 443 KQGRDRFFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVTIGTAEDSKALNLEKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY V++G + +Y ++
Sbjct: 503 RYHKVVIMCDADVDGSHISTLILTFFFRYMKELIEKGHVYIAAPPLYLVKKGNKKEYAWN 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D + +A +IQR+KGLGEM QLW+TTLNPE R +Q+ I+ AEA+ VF
Sbjct: 563 DVQRDVANERMGGSA--AIQRYKGLGEMNAEQLWDTTLNPENRTFRQVTIDSLAEADRVF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A+ +D
Sbjct: 621 SMLMGDEVPPRREFIEKNASYAKID 645
>gi|402494030|ref|ZP_10840777.1| DNA gyrase subunit B [Aquimarina agarilytica ZC1]
Length = 645
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 297/628 (47%), Positives = 418/628 (66%), Gaps = 22/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + +NSV+V DNGRGIP+ LH
Sbjct: 29 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDVITVTINENNSVTVTDNGRGIPVGLHKK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G + Q
Sbjct: 89 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLHATVFREGKVWEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSK---DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+Y RGK V PV S D+ GT + F PD+ +F ++++++T+A R+RELA+
Sbjct: 147 EYERGKAV-------YPVKSTGDTDKNGTIVTFLPDRSIFQQTVEYNYDTLASRMRELAY 199
Query: 178 LNPKLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
LN +TI L + EK ++ +E F + GL+E+V +L+ + P+ V+ + + I
Sbjct: 200 LNKGITITLTDARNTDEKGEFISETFHSNEGLKEFVSFLDASRTPIIGHVIAMEGEKNDI 259
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+ + +D+Y++ + Y N+I T +GGTH+ G + LT TL S +
Sbjct: 260 PVEVAMIY-NDSYAENLHSYVNNINTHEGGTHLSGFRRGLTSTLKKFADNSGLLDKLKFE 318
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P
Sbjct: 319 IAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPADAK 378
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS T P E EIF+VEGDSAG
Sbjct: 379 TIIQKVILAAQARHAAKKAREMVQRKTVMSIGGLPGKLSDCSETDPAECEIFLVEGDSAG 438
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE--- 471
G+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K
Sbjct: 439 GTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVSIGTEEDSKALNL 498
Query: 472 -ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
LRYHK++I+ DADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY V++G + QY
Sbjct: 499 TKLRYHKVVIMCDADVDGSHIATLILTFFFRYMKELIEQGYVYIAAPPLYLVKKGAKKQY 558
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
++D + + + N+ IQR+KGLGEM QLW+TT+NPE R ++Q+ IE EA+
Sbjct: 559 AWNDDQRDLLVKEYGENS--KIQRYKGLGEMNAEQLWDTTMNPEFRTMRQVTIESMTEAD 616
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
VFS LMG V R+E I+ A N+D
Sbjct: 617 RVFSMLMGDEVPPRREFIEKNAIYANID 644
>gi|340351772|ref|ZP_08674674.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
gi|339616843|gb|EGQ21482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
Length = 656
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/633 (48%), Positives = 421/633 (66%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY S+IEV + DNSV+V D+GRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCSHIEVTINEDNSVTVEDDGRGIPVDEHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+R+G Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRNGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D+ GTR +FWPD +FTT + F +A R+RELAFLN
Sbjct: 149 EYEQGKPLYPVKV----VGETDKTGTRQQFWPDGSIFTTTV-FQWEIVARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIKITLTDLRPNSEGKTRQEVFHAKEGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ I
Sbjct: 264 AIMYNTD-YNENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDPQIAKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P
Sbjct: 323 ITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPVEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 LICDKVILAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFK-- 469
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGESDFEAN 502
Query: 470 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
+ LRY KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +
Sbjct: 503 TDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTYKKVSE 562
Query: 530 YCYDDAE----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
YCY + + L K N QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+
Sbjct: 563 YCYTEQQRLQFLNKYAGGDEENKAVHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIEN 622
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A+ A+ +FS LMG V+ R+E I+ A N+D
Sbjct: 623 ASTADEMFSMLMGDDVEPRREFIEQNATYANID 655
>gi|448562398|ref|ZP_21635356.1| DNA gyrase subunit B [Haloferax prahovense DSM 18310]
gi|445718716|gb|ELZ70400.1| DNA gyrase subunit B [Haloferax prahovense DSM 18310]
Length = 639
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/615 (50%), Positives = 417/615 (67%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSGKLEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEFGEPQVDEFERVRDLEPDEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L D + + + F GG+ E+V++LN K LHD ++ + + +GI +++A
Sbjct: 204 GVEISL----GDERTGESSTFLFEGGIREFVEYLNETKTALHDDIIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISIKPPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTTTAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPAESELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|427392992|ref|ZP_18886895.1| DNA gyrase subunit B [Alloiococcus otitis ATCC 51267]
gi|425730923|gb|EKU93753.1| DNA gyrase subunit B [Alloiococcus otitis ATCC 51267]
Length = 649
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 418/620 (67%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DNA+DEA AGYA I V++L + + VADNGRGIP+D+
Sbjct: 39 MYIGSTSKEGLHHLVWEIVDNAIDEAMAGYADKISVSILEGDVIQVADNGRGIPVDIQEK 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALSE L+V V RDG Y Q
Sbjct: 99 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEYLQVQVHRDGKIYQQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG + L V D GT + F D +F +D +T+A RIRELAFLN
Sbjct: 157 VYKRGLVDSDLEV----VGETDHTGTIVTFKADSLIFKDTTSYDFDTLATRIRELAFLNR 212
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ ED Q Y F GG+ YV LN+ ++ L++ F + + +GI++++A
Sbjct: 213 GLNISI--EDKRQADGQSLNYHFEGGISSYVDHLNSKREVLYETPIFLEGEEEGISVEIA 270
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ +D++ ++ +AN+I T +GG HI G K +LTR +N +K+ +++ + + +G+
Sbjct: 271 LQH-TDSFHTNLMSFANNIHTYEGGMHISGFKTALTRAVNDYARKNNLLRESEDNFTGDD 329
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN EVR ++D+ ++ YL +P V I+ K
Sbjct: 330 VREGLTVVLSIKHPDPQFEGQTKTKLGNSEVRGIIDRLFSQHFERYLMENPKVGKRIVDK 389
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+L A KA AAKRAR++ R+KS L S+LPGKLADCSS PEESE+FIVEGDSAGGSAKQ
Sbjct: 390 ALLASKARQAAKRAREVTRKKSGLEISNLPGKLADCSSKDPEESELFIVEGDSAGGSAKQ 449
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G GE+F E RY+K+I
Sbjct: 450 GRSRIFQAILPIRGKILNVEKASIDRILANEEIRSLFTAMGTGF-GEEFNVEEARYNKLI 508
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTL+LT YRY + L + G +Y+ PPLY+V++GK+V+Y D EL
Sbjct: 509 IMTDADVDGAHIRTLVLTLLYRYMRPLIEAGFVYIAQPPLYQVKQGKKVKYLDSDRELDS 568
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
P + S+QR+KGLGEM QLWETT+NPE R L ++ ++DA EA+ +F LMG
Sbjct: 569 YLKEIPDSPKPSVQRYKGLGEMDAEQLWETTMNPEHRRLLRVDVDDAIEADTIFDMLMGE 628
Query: 600 RVDTRKELI-QNAANLVNLD 618
V R++ I +NA + N+D
Sbjct: 629 DVKPRRDFIKENARYVENID 648
>gi|358465989|ref|ZP_09175862.1| hypothetical protein HMPREF9093_00323 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069504|gb|EHI79409.1| hypothetical protein HMPREF9093_00323 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 639
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 305/621 (49%), Positives = 419/621 (67%), Gaps = 12/621 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T RGLHHLV+EI+DN+VDEA AGY + I+V +L DN + V DNGRGIP D+HP
Sbjct: 27 MYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKILPDNIIEVVDNGRGIPTDIHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLT+LHAGGKF + Y VSGGLHGVG+SVVNALS+ LEV V ++ Y+Q
Sbjct: 87 YGKSALEIVLTILHAGGKF--ENDNYKVSGGLHGVGVSVVNALSDWLEVEVRKERNVYYQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RGKP + ++ + GT +RF D +F T I +++ T++ R++ELA+LN
Sbjct: 145 KYHRGKPEEDV--KIVGSCEESEHGTTVRFKADGDIFETLI-YNYFTLSNRLKELAYLNR 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI L D E+ + Y F GG+ +++ + ++ + D + + D + +D+
Sbjct: 202 GLTITL--SDLRKEEKKEEIYKFDGGILDFLNEIVKEEATIVDKPFYVSSEQDNVGVDVT 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+ + + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G
Sbjct: 260 FTYTT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLLGND 318
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P + ++ K
Sbjct: 319 IREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNGLKIFLEDNPAITKIVIEK 378
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L++ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQ
Sbjct: 379 ILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQ 438
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII
Sbjct: 439 GRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKII 497
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK
Sbjct: 498 LMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKN 557
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG
Sbjct: 558 VLGQMNEENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMG 617
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V N+D
Sbjct: 618 DKVEPRREFIEEHAEYVKNID 638
>gi|386820195|ref|ZP_10107411.1| DNA gyrase, B subunit [Joostella marina DSM 19592]
gi|386425301|gb|EIJ39131.1| DNA gyrase, B subunit [Joostella marina DSM 19592]
Length = 646
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/625 (46%), Positives = 420/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + DNSV+V DNGRGIP+DLH
Sbjct: 30 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDTIRVVINEDNSVTVEDNGRGIPVDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALSESL+ TV+R+G + Q
Sbjct: 90 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSESLKATVYRNGTIWEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK + V V D +GT + F PD +F +++ ++T+A R+RELAFLN
Sbjct: 148 EYERGKSLYP----VKSVGETDLRGTLVTFKPDPTIFQQTLEYSYDTLASRMRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+TI L + EK ++ ++ GL+E++++L+ +++ L DV+ + + I ++
Sbjct: 204 GITITLTDKRHKDEKGEFVFEKFHSEEGLKEFIKFLDGNRESLIKDVISMEGEKNDIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++++ + Y N+I T +GGTH+ G + LT TL S + ++G
Sbjct: 264 VAMVYNT-SFTENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGLLDKLKFEIAG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE +PD +I+
Sbjct: 323 DDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPDDAKTIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+V+ LPGKL+DCS PE+ E+F+VEGDSAGG+A
Sbjct: 383 QKVILAAQARHAARKAREMVQRKTVMSGGGLPGKLSDCSEQDPEKCEVFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K L
Sbjct: 443 KQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVTIGTEEDSKALNLSKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY + L + G IY+ PPLY +++G + +Y ++
Sbjct: 503 RYHKVVIMCDADVDGSHIATLILTFFFRYMRELVENGYIYIATPPLYLIKKGNKKEYAWN 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
D E ++ F + ++QR+KGLGEM QLW+TT+NP+ R L+Q+ I+ +EA+ +F
Sbjct: 563 DKERDRLAEEFGGSV--NVQRYKGLGEMNAEQLWDTTMNPDFRTLRQVTIDSGSEADRIF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 621 SMLMGDEVPPRREFIEKNAVYANID 645
>gi|422882008|ref|ZP_16928464.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK355]
gi|332362817|gb|EGJ40611.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK355]
Length = 649
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 428/625 (68%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V DNGRGIP+D+
Sbjct: 34 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIQVFIEKDNSITVVDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+V V+++G ++Q
Sbjct: 94 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTQLDVRVYKNGQIHYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG+ V L + DR GT + F PD ++FT ++FD + R++ELAFLN
Sbjct: 152 EYSRGQVVADLEI----IGETDRTGTTVHFTPDPEIFTETVEFDFEKLNKRVQELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ + E Q +Y + GG+ YVQ++N +K + + + ++D IT+++A
Sbjct: 208 GLRISITDKRDGME--QVKDYHYEGGIASYVQYINENKDVIFETPIYTDGEMDDITVEVA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR +N KK+K +K+ + +L+GE
Sbjct: 266 MQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKLLKENEDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +++L +P V I+ K
Sbjct: 325 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFSDFLLENPAVARKIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS P+E+E+FIVEGDSAGGSAK
Sbjct: 385 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDPQETELFIVEGDSAGGSAKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY-----CYDD 534
I+TDADVDGAHIRTLLLT YRY K + + G +Y+ PP+Y V+ G +V+ +
Sbjct: 504 IMTDADVDGAHIRTLLLTLIYRYMKPVLEAGFVYIAQPPIYGVKVGSEVKEYIQPGANQE 563
Query: 535 AELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
EL+ + + + +IQR+KGLGEM QLWETT+NPE R++ ++ ++DAAEA+ +F
Sbjct: 564 EELQAALARYSEGRSKPTIQRYKGLGEMDDHQLWETTMNPEHRLMARVSVDDAAEADKIF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+ A LD
Sbjct: 624 DMLMGDRVEPRREFIEENAVYSTLD 648
>gi|365838869|ref|ZP_09380126.1| DNA gyrase, B subunit [Anaeroglobus geminatus F0357]
gi|364566379|gb|EHM44071.1| DNA gyrase, B subunit [Anaeroglobus geminatus F0357]
Length = 605
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/581 (52%), Positives = 416/581 (71%), Gaps = 21/581 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN++DEA AGYA++IEV + ADNSV+V DNGRGIP+ +H
Sbjct: 39 MYIGSTSLKGLHHLVYEVVDNSIDEALAGYATHIEVTIEADNSVTVIDNGRGIPVAMH-K 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLTVLHAGGKFGG GY +SGGLHGVG+SVVNALSE ++ V RDG ++
Sbjct: 98 IGKPAIEVVLTVLHAGGKFGGE--GYPISGGLHGVGISVVNALSEQTKIEVKRDGYLWNI 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG L V P+++ D +GT++ F PD ++F +D T+ R+RELAFLN
Sbjct: 156 AFARGLTTKPLQ-KVRPLEAGDERGTKVWFKPDPEIFPDT-AYDFETLRIRLRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV----GFRKDVDGITI 236
LTI L +D K++ Y + GGL+ +V++LN ++ P++ V G + D I +
Sbjct: 214 GLTITL----TDKRKDRKEVYHYEGGLKSFVEFLNENRNPVNSTVISLEGIKND---IIV 266
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
D+ALQ+ +D YS+ +L + N+I T +GGTH+ G ++ LTRT+N G+ S +K+ + +LS
Sbjct: 267 DIALQY-NDGYSENILTFVNNIFTEEGGTHLSGFRSGLTRTINDYGRSSGIIKENEENLS 325
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT IISV+V P+FEGQTKT+LGN EV+ +VD + + L + E +P +I
Sbjct: 326 GEDVREGLTAIISVKVREPQFEGQTKTKLGNSEVKGIVDNIISDGLNQTFEENPSEAKAI 385
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
++K+++A +A AA++AR+L R+K+ L SSLPGKLADCS P+ +EI++VEGDSAGGS
Sbjct: 386 VNKNINAARARQAARKARELTRRKNALEISSLPGKLADCSEKDPDRTEIYLVEGDSAGGS 445
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE+ + NEEI+ +I A G G+ GE+F E RY
Sbjct: 446 AKQGRDRKFQAILPLRGKIINVEKARLDKILANEEIRAMITAFGTGI-GEEFDIEKRRYD 504
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII+TDADVDGAHIRTLLLTFFYR+ K L +G +Y+ PPLY+V +G+ + Y Y D E
Sbjct: 505 KIIIMTDADVDGAHIRTLLLTFFYRFMKPLITKGHVYIAQPPLYQVRKGRSIWYLYTDDE 564
Query: 537 LK-KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 576
LK K++ N + +QR+KGLGEM P QLWETT++P+ R
Sbjct: 565 LKSKIEEVGGDNTV--VQRYKGLGEMNPEQLWETTMDPQFR 603
>gi|374812884|ref|ZP_09716621.1| DNA gyrase subunit B [Treponema primitia ZAS-1]
Length = 642
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 312/629 (49%), Positives = 418/629 (66%), Gaps = 23/629 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQA-------GYASNIEVALLADNSVSVADNGRGI 53
MYIG+TG GLHHLV+E++DN++DEA A G+ +I V L ++ V V DNGRGI
Sbjct: 25 MYIGTTGIDGLHHLVFEVVDNSIDEAMAINPETGKGFCDDILVVLEGNDVVRVEDNGRGI 84
Query: 54 PIDLHPATNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWR 113
P+D+HP SALE V+T LHAGGKF +S Y VSGGLHGVG+SVVNALSE E V
Sbjct: 85 PVDIHPGEGVSALELVMTRLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSEWCEAFVHI 142
Query: 114 DGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRI 172
DG + Q+Y G P + DR+GT +RF D +F TT FD ++ R+
Sbjct: 143 DGKIHTQRYQIGVP----DAPTHEAGTTDRRGTVVRFKADTSIFETTTYNFD--ALSNRL 196
Query: 173 RELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDV 231
RELAFLN L I +R E K+ E+ F GG++ +V +LN +K L+ + +
Sbjct: 197 RELAFLNKGLKITIRDERLSTPKDH--EFKFDGGVKSFVDYLNENKNVLYREPIFIEGSR 254
Query: 232 DGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDK 291
DG+ ++ A+Q+ +D Y++ M + N I T +GGTH+ G K++LTRTLN KKSK K
Sbjct: 255 DGVEVECAIQY-NDGYNEIMFSFVNDINTREGGTHLVGFKSALTRTLNEYLKKSKHAKKL 313
Query: 292 DISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPD 351
+ SLSG+ VREGLT ++S +VPNP+FEGQTK +LGN EV+ +V+ V E L YL+ HPD
Sbjct: 314 EESLSGDDVREGLTAVLSTKVPNPQFEGQTKGKLGNSEVKGIVESLVNEQLELYLDQHPD 373
Query: 352 VLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGD 411
V+ +IL KS+ A KA +AA++ARD R+K+ + S+ LPGKLADCS P E+FIVEGD
Sbjct: 374 VIGNILEKSILAAKARIAARQARDATRRKNAMDSAGLPGKLADCSEKDPSLCELFIVEGD 433
Query: 412 SAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE 471
SAGGSAK GR+R+FQAIL L GK+LNVE+ + NE++Q +I ++G G G +F
Sbjct: 434 SAGGSAKMGRNRQFQAILSLFGKMLNVEKTRIEKVVTNEKLQPIIASIGAGC-GVEFDIA 492
Query: 472 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 531
+RYHKI+I+ DADVDG+HIRTLLLTFFYRY L + G +Y+ +PPLYKV K+ Y
Sbjct: 493 KIRYHKIVIMADADVDGSHIRTLLLTFFYRYMTALIERGHVYLAMPPLYKVNYEKKTFYA 552
Query: 532 YDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
YDD E + + S +IQR+KGLGEM P QLW+TT++P QR + Q+ ++DA EA
Sbjct: 553 YDDEEKDRLLAESGRDPEKVAIQRYKGLGEMNPDQLWDTTMDPAQRNIIQIHLDDAVEAE 612
Query: 591 VVFSSLMGARVDTRKELIQNAANLV-NLD 618
+F++LMG V R+E I+ A LV NLD
Sbjct: 613 RIFTTLMGEVVQPRREFIEENALLVANLD 641
>gi|258647794|ref|ZP_05735263.1| DNA gyrase, B subunit [Prevotella tannerae ATCC 51259]
gi|260852245|gb|EEX72114.1| DNA gyrase, B subunit [Prevotella tannerae ATCC 51259]
Length = 653
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 301/630 (47%), Positives = 419/630 (66%), Gaps = 20/630 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE +DN++DEA AGY ++IEV + DNS+ V DNGRGIP+D+HP
Sbjct: 31 MYIGDISDKGLHHLVYETVDNSIDEALAGYCTHIEVTICTDNSIIVQDNGRGIPVDMHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++SALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+RDG Y Q
Sbjct: 91 EHRSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMTSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V +GT+ +FWPD VFT I ++++T+A R+RELAFLN
Sbjct: 149 EYEQGKPLYPVKV----VGETQLRGTKQQFWPDDTVFTATI-YNYDTLATRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDL 238
L I L D E N E F++ GL E+V+++++ + L +DV+ + I I++
Sbjct: 204 GLKITLTDLRPDEEGNTKQEEFYSEQGLREFVRYVDSSRTHLFNDVIYISTNKADIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTVKDKDISLS 296
A+ + + +YS+ + Y N+I TI+GGTH+ G + ++TR L +++ K ++ I +S
Sbjct: 264 AIMY-NTSYSENVHSYVNNINTIEGGTHLIGFRQAITRVLKKYAEQTAAKQIEKAKIEIS 322
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE REGLT +ISV+V P+FEGQTKTRLGN EV V+Q+V E LT YLE HP I
Sbjct: 323 GEDFREGLTAVISVKVAEPQFEGQTKTRLGNTEVTGAVNQAVGEALTNYLEEHPKEAKLI 382
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A +AA++AR+ V++K+ + LPGKLADCSS E+F+VEGDSAGGS
Sbjct: 383 VDKVILAATARIAARKARESVQRKNPMSGGGLPGKLADCSSKDAAVCELFLVEGDSAGGS 442
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA---- 472
AKQ R R QAILPLRGKILNVE+ ++++E+ N+I+ALG+ ++ KEA
Sbjct: 443 AKQARSRTTQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGLDEDSKEANIEK 502
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV--ERGKQVQY 530
LRYHKIII+ DADVDG HI TL++T FYRY + ++G +Y+ +PPLY+ ++G +Y
Sbjct: 503 LRYHKIIIMADADVDGQHIATLIMTLFYRYMPQIIEDGYLYIAMPPLYRCRAKKGHAEEY 562
Query: 531 CYDDAELKKVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 588
CY++ + + + +I QR+KGLGEM P QLWETT+NPE R+LKQ+ +E A
Sbjct: 563 CYNETARLRFIEQYGDGSEDNITTQRYKGLGEMNPEQLWETTMNPETRLLKQVSLESATN 622
Query: 589 ANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A+ FS LMG V R+E I+ A N+D
Sbjct: 623 ADYTFSMLMGEDVGPRREFIEKNATYANID 652
>gi|422871190|ref|ZP_16917683.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1087]
gi|328945965|gb|EGG40112.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK1087]
Length = 649
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 428/625 (68%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V DNGRGIP+D+
Sbjct: 34 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIQVFIEKDNSITVVDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+V V+++G ++Q
Sbjct: 94 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTQLDVRVYKNGQIHYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG+ V L + DR GT + F PD ++FT ++FD + R++ELAFLN
Sbjct: 152 EYSRGQVVADLEI----IGETDRTGTTVHFTPDPEIFTETVEFDFEKLNKRVQELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ + E Q +Y + GG+ YVQ++N +K + + + ++D IT+++A
Sbjct: 208 GLRISITDKRDGIE--QVKDYHYEGGIASYVQYINENKDVIFETPIYTDGEMDDITVEVA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR +N KK+K +K+ + +L+GE
Sbjct: 266 MQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKLLKENEDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +++L +P V I+ K
Sbjct: 325 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFSDFLLENPAVARKIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS P+E+E+FIVEGDSAGGSAK
Sbjct: 385 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDPQETELFIVEGDSAGGSAKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY-----CYDD 534
I+TDADVDGAHIRTLLLT YRY K + + G +Y+ PP+Y V+ G +V+ +
Sbjct: 504 IMTDADVDGAHIRTLLLTLIYRYMKPVLEAGFVYIAQPPIYGVKVGSEVKEYIQPGANQE 563
Query: 535 AELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
EL+ + + + +IQR+KGLGEM QLWETT+NPE R++ ++ ++DAAEA+ +F
Sbjct: 564 EELQAALARYSEGRSKPTIQRYKGLGEMDDHQLWETTMNPEHRLMARVSVDDAAEADKIF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+ A LD
Sbjct: 624 DMLMGDRVEPRREFIEENAVYSTLD 648
>gi|24212705|ref|NP_710186.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45655919|ref|YP_000005.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|386072493|ref|YP_005986810.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|417761365|ref|ZP_12409377.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|417776551|ref|ZP_12424387.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|417784799|ref|ZP_12432504.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|418670039|ref|ZP_13231413.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418672460|ref|ZP_13233799.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|418707603|ref|ZP_13268423.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418730771|ref|ZP_13289247.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|421087509|ref|ZP_15548345.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|421104639|ref|ZP_15565234.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421123297|ref|ZP_15583579.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|24193336|gb|AAN47204.1|AE011192_5 DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45599152|gb|AAS68642.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|321401260|gb|ADW83041.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401264|gb|ADW83043.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401268|gb|ADW83045.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401272|gb|ADW83047.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401278|gb|ADW83050.1| DNA gyrase subunit B [Leptospira interrogans]
gi|353456282|gb|AER00827.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|409942779|gb|EKN88384.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|409951588|gb|EKO06102.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|410344041|gb|EKO95236.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|410366091|gb|EKP21484.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429758|gb|EKP74133.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|410573693|gb|EKQ36739.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|410580588|gb|EKQ48410.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|410754329|gb|EKR15984.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410772024|gb|EKR47218.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774333|gb|EKR54341.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|455790085|gb|EMF41975.1| DNA gyrase, B subunit [Leptospira interrogans serovar Lora str. TE
1992]
gi|456824447|gb|EMF72884.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456971873|gb|EMG12397.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
gi|456985971|gb|EMG21650.1| DNA gyrase, B subunit [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 639
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/620 (47%), Positives = 420/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|448624637|ref|ZP_21670585.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
gi|445749842|gb|EMA01284.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
Length = 639
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/615 (50%), Positives = 419/615 (68%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEV+L D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVSLHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEFGEPQVDEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L E +D + + + F GG+ E+V++LN K LHD ++ + + +GI +++A
Sbjct: 204 GVEISLADERTD----ESSSFRFEGGIREFVEYLNETKTALHDDIIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S++LPGKLADC S P ESE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTALPGKLADCQSRDPSESELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|190710555|gb|ACE95108.1| gyrase subunit B [Bacillus thuringiensis serovar monterrey]
Length = 627
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/615 (50%), Positives = 420/615 (68%), Gaps = 16/615 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYI ST +GLHHLV+EI+DN++DEA AGY I V++ NS+ V DNGRGIP+ +
Sbjct: 24 MYIASTSGKGLHHLVWEIVDNSIDEALAGYCDQINVSIEEYNSIRVTDNGRGIPVGIQEK 83
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A++ ++TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++Q
Sbjct: 84 MGRPAVKVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQ 141
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG PV L + D+ GT RF PD ++F ++ +T+A R+RELAFLN
Sbjct: 142 KYERGIPVADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNR 197
Query: 181 --KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 237
KLTI ++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++
Sbjct: 198 NIKLTIEDKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVE 252
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
++LQ+ ++ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+G
Sbjct: 253 VSLQY-NEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTG 311
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
E VREGLT I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+
Sbjct: 312 EDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIV 371
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K A +A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSA
Sbjct: 372 EKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSA 431
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 477
KQGRDR FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK
Sbjct: 432 KQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHK 490
Query: 478 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 537
+II+TDADVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL
Sbjct: 491 VIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKEL 550
Query: 538 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+K+ + P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LM
Sbjct: 551 EKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILM 610
Query: 598 GARVDTRKELIQNAA 612
G +V+ R+ IQ A
Sbjct: 611 GDKVEPRRNFIQENA 625
>gi|448585462|ref|ZP_21647855.1| DNA gyrase subunit B [Haloferax gibbonsii ATCC 33959]
gi|445726162|gb|ELZ77779.1| DNA gyrase subunit B [Haloferax gibbonsii ATCC 33959]
Length = 639
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/615 (50%), Positives = 417/615 (67%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVDTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEFGEPQVDQFERVRDLEPDEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L D + + + F GG+ E+V++LN K LHD ++ + + +GI +++A
Sbjct: 204 GVEISL----GDERTGESSTFLFEGGIREFVEYLNETKTALHDDIIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P +SE+F+VEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSKSELFVVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|418699886|ref|ZP_13260835.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
gi|321401274|gb|ADW83048.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401276|gb|ADW83049.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401280|gb|ADW83051.1| DNA gyrase subunit B [Leptospira interrogans]
gi|410761007|gb|EKR27196.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 639
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/620 (47%), Positives = 420/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|52549974|gb|AAU83823.1| DNA gyrase subunit B [uncultured archaeon GZfos34A6]
Length = 635
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/626 (48%), Positives = 426/626 (68%), Gaps = 24/626 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHL E++DN+VDEA G+ ++I V + DNSV+V DNGRGIP+D+H
Sbjct: 25 MYIGDTGTRGLHHLANEVIDNSVDEALIGFCTSIVVIIHPDNSVTVTDNGRGIPVDMHSE 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
N SALE V+T LHAGGKF + Y V+GGLHGVG+SVVNALSE EV V RDG Y Q
Sbjct: 85 YNLSALEVVMTKLHAGGKF--DNKVYKVAGGLHGVGISVVNALSEWQEVEVVRDGKRYFQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQ----GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELA 176
+Y GKPV C V + D GTR+ F PD +F +FD + +A R+RELA
Sbjct: 143 RYEYGKPV----CEVKELSYTDENNGECGTRVTFKPDSTIFGV-YEFDAHILATRLRELA 197
Query: 177 FLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITI 236
FLN L ++L+ E S ++ + + GG+ +++++N +KK LH + F + D + +
Sbjct: 198 FLNRGLLLSLKDERSGEDR----AFKYDGGITSFLEYINRNKKVLHSPITFEGEKDDVKV 253
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+ LQ+ +D+Y++ + + N+++T++GG H+ G KA+LTR LN GK + + K ++L
Sbjct: 254 AIGLQY-NDSYAENIFSFVNNVKTVEGGKHLSGFKAALTRVLNEYGKSNNML--KKVNLD 310
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ VREGL IIS+++ P+FEGQTKT+LGN EV+ +V+ V+E+L ++L+ +P D+I
Sbjct: 311 GDDVREGLAAIISLKLREPQFEGQTKTKLGNSEVKGIVESFVREHLWDFLDENPKDADAI 370
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AA+ AR++VR+K + SLPGKLADCS P + EI+IVEGDSAGGS
Sbjct: 371 IRKALEASRAREAARHAREIVRKKDSF-ADSLPGKLADCSERDPAKKEIYIVEGDSAGGS 429
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ RD+ FQAILP+RGKILNVE+ + K+ EI+ LI ALG G+ G+DF + RY+
Sbjct: 430 AKQARDKNFQAILPIRGKILNVEKARLDKILKSNEIRTLITALGAGI-GDDFDMQKARYN 488
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KIII++DADVDGAHIRTLLLTFFYRY + L IYV +PPLY V++GK+++Y + D E
Sbjct: 489 KIIIMSDADVDGAHIRTLLLTFFYRYMQELVTANHIYVALPPLYMVKKGKEIRYAFSDDE 548
Query: 537 LKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ +A IQ +KGLGEM P QLWETT+NP R +K + +EDAAE + +F
Sbjct: 549 YVNILDDLNVKEGDAGVKIQHYKGLGEMNPEQLWETTMNPATRGIKLVTLEDAAEVDWLF 608
Query: 594 SSLMGARVDTRKELIQ-NAANLVNLD 618
+ LMG V+ R+ I +A ++NLD
Sbjct: 609 TVLMGEEVEPRRNFIHAHAKEVMNLD 634
>gi|383788300|ref|YP_005472868.1| DNA gyrase subunit B [Caldisericum exile AZM16c01]
gi|381363936|dbj|BAL80765.1| DNA gyrase subunit B [Caldisericum exile AZM16c01]
Length = 649
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/621 (49%), Positives = 424/621 (68%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+E++DN++DEA AG+ + I V + D S++V DNGRGIP+D HP
Sbjct: 41 MYIGSTSESGLHHLVFEVVDNSIDEAMAGFCTEIIVKMGKDGSITVIDNGRGIPVDEHPE 100
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ S +E LT L+AGGKF G Y VSGGLHGVG+SVVNALS+ L+V V+R+G Y Q
Sbjct: 101 LHISGVEVALTKLNAGGKFEGKV--YHVSGGLHGVGVSVVNALSKYLKVRVFRNGKIYEQ 158
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y++GKP+ +L + + GT I F PD +F T ++F + I +++ELA+LN
Sbjct: 159 EYAKGKPLYSLKE--VGNSLFENTGTEITFIPDDTIFET-VEFKEDIIKEKLKELAYLNK 215
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I E + E N Y G+ E V+ +N ++ + + + F + D +++A
Sbjct: 216 GLKIKFINEKTGEE----NIYESKEGIVELVKDINKGEQVIPENPIYFNYEEDHFFLEIA 271
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S +S +L + N+IRT +GGTH G+K +LT+ LN G + K +KD+ +L+ +
Sbjct: 272 MQYNS-GFSSEILSFVNNIRTTEGGTHELGLKLALTKLLNDEGLQLKMIKDE--ALTFDD 328
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT II+V++ P+FEGQTKT+LGN EV+ V V+ LT Y + H D L IL K
Sbjct: 329 VKEGLTAIINVKMLEPQFEGQTKTKLGNAEVKNKVYNIVKTQLTLYFDKHVDELQKILKK 388
Query: 360 SLSALKAALAAKRARDLVRQKSVLR-SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
L A A +AAK+A++LVR+K L S LPGKLADCS P ++E++IVEG+SAGGSAK
Sbjct: 389 VLLAQSARIAAKKAKELVRRKGALDFSGRLPGKLADCSLNDPAQTELYIVEGESAGGSAK 448
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
Q RDR+FQA+LPLRGKILNVE+ + A +EEI+NLI +LG GV GEDF++E LRYHKI
Sbjct: 449 QARDRKFQAVLPLRGKILNVEKVNMAHALSSEEIKNLITSLGCGV-GEDFREEHLRYHKI 507
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFF+RY + L ++G +Y+ PPLY+V K V+Y Y D ELK
Sbjct: 508 IIMTDADVDGAHIRTLLLTFFFRYMRPLIEKGYLYIAQPPLYRVSYDKDVRYAYSDEELK 567
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
V +QR+KGLGEM P QLWETT++P +R++K++ IE+A +A+ +F LMG
Sbjct: 568 HVMEHIKDPNKAEVQRYKGLGEMDPQQLWETTMDPTRRIIKRVTIEEAEQADKLFELLMG 627
Query: 599 ARVDTRKELIQN-AANLVNLD 618
+ V RKE I N A +VNLD
Sbjct: 628 SEVQPRKEFIMNHAKEVVNLD 648
>gi|343491935|ref|ZP_08730314.1| DNA gyrase subunit B [Mycoplasma columbinum SF7]
gi|343128389|gb|EGV00191.1| DNA gyrase subunit B [Mycoplasma columbinum SF7]
Length = 642
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/625 (49%), Positives = 416/625 (66%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLV+EI+DN+VDE AG+A+ I++ L D V V DNGRGIP D+HP
Sbjct: 27 MYIGSTGIKGLHHLVWEIVDNSVDECMAGFANEIKITLTKDGYVQVEDNGRGIPTDMHPE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T S +ET LT LHAGGKF S+ Y VSGGLHGVG SVVNALS+ LE V RDG ++
Sbjct: 87 TGMSGVETALTKLHAGGKF--DSNTYKVSGGLHGVGASVVNALSDDLEAWVKRDGKLHYA 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ G + + VD K+ GT I+F PD V FD + I +++A+LN
Sbjct: 145 HFQNGGQIIQPLTILDEVD-KNETGTTIKFHPDFTVMDKN-NFDKDVIVDHAKQIAYLNK 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK------DVDGI 234
L I+++ D N YNE+ F GG+ +YV+ LNT + + + + + + + +
Sbjct: 203 GLKISVK----DERDNTYNEFVFEGGIVDYVKELNTGQTLITEQIIYAEGEYSHGEDAPV 258
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++ALQ+ S + ++ YAN+I T +GGTH G +LTR LNS G S +K +
Sbjct: 259 QVEVALQYNS-KITGNIVSYANNILTTEGGTHENGFYDALTRLLNSYGLDSGIIKKDEEK 317
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
+S E V+EGL IIS++ +P FEGQTKT+LGN + R V++ E L +L +P+
Sbjct: 318 VSREDVKEGLVAIISIKHTDPIFEGQTKTKLGNKDARIAVNKVFSENLERFLNENPNEAK 377
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I+ K+L+A K+ +AA+ ARD R+K+V S SLPGKLADC+S E SE++IVEG+SAG
Sbjct: 378 LIVQKTLAAKKSRIAAETARDAARRKTVFESGSLPGKLADCTSKNAEISELYIVEGNSAG 437
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALR 474
GSAK GRDR QAILPLRGK++NVE+ + ++ NEEI +LI ALG GV ++F LR
Sbjct: 438 GSAKMGRDRTTQAILPLRGKVINVEKNQASKVFNNEEINSLIAALGTGVL-DNFNINKLR 496
Query: 475 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 534
YHKIII+TDADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+++ K V+Y Y+D
Sbjct: 497 YHKIIIMTDADVDGAHIRTLLLTFFYRYFRKLIEYGFIYIAQPPLYKIQQNKNVEYAYND 556
Query: 535 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
+ ++ S N+ +IQR+KGLGEM P QLWETT+NPE R++ Q+ IEDAA A+ +F+
Sbjct: 557 EQKDEIMSKLNPNSKINIQRYKGLGEMDPEQLWETTMNPETRLMLQVQIEDAARADQMFT 616
Query: 595 SLMGARVDTRKELI-QNAANLVNLD 618
LMG V R+E I QNA + N+D
Sbjct: 617 ILMGDDVAPRREFIEQNAKYVKNID 641
>gi|408370849|ref|ZP_11168622.1| DNA gyrase subunit B [Galbibacter sp. ck-I2-15]
gi|407743617|gb|EKF55191.1| DNA gyrase subunit B [Galbibacter sp. ck-I2-15]
Length = 646
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 292/628 (46%), Positives = 416/628 (66%), Gaps = 22/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + DNS++V DNGRGIP+DLH
Sbjct: 30 MYIGDVGTRGLHHLVYEVVDNSIDEAMAGHCDTIRVTINEDNSITVEDNGRGIPVDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALSESL TV+R+G + Q
Sbjct: 90 EGISALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSESLTATVYREGKIWEQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGK V V + + +GT + F PD +FT +F ++T+A R+REL+FLN
Sbjct: 148 NYERGKAVHP----VKSIGETELRGTMVTFKPDDTIFTQITEFSYDTLASRMRELSFLNK 203
Query: 181 KLTIAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
+T+ L + ED +P + ++ GL+E+V++L+ ++ L +V+ + + I
Sbjct: 204 GITLTLTDKRQKGEDGEP---VFERFYSEEGLKEFVRYLDGNRDSLIREVIYMEGEKNDI 260
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+ + + ++++ + Y N+I T +GGTH+ G + LT TL S +
Sbjct: 261 PVEVAMVYNT-SFNENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGMLDKLKFE 319
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++G+ REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE HPD
Sbjct: 320 IAGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEEHPDDAK 379
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
SI+ K + A +A AA++AR++V++K+V+ LPGKL+DCS P EIF+VEGDSAG
Sbjct: 380 SIVQKVILAAQARHAARKAREMVQRKTVMSGGGLPGKLSDCSEQDPAVCEIFLVEGDSAG 439
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK---- 470
G+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ A G+ + E+ K
Sbjct: 440 GTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTAFGVTIGTEEDSKALNL 499
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
E LRYHKI+I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G + Y
Sbjct: 500 EKLRYHKIVIMCDADVDGSHIATLILTFFFRYMRELIENGYVYIATPPLYLVKKGAKKAY 559
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+DD + ++ + +A+ IQR+KGLGEM QLW+TT+NPE R L+Q+ I++ +EA+
Sbjct: 560 AWDDKKRDELNKEYGGSAV--IQRYKGLGEMNAEQLWDTTMNPEYRTLRQVTIDNGSEAD 617
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A +D
Sbjct: 618 RIFSMLMGDEVPPRREFIEKNAVYAKID 645
>gi|359406618|ref|ZP_09199293.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
gi|357555419|gb|EHJ37072.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
Length = 657
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/634 (48%), Positives = 422/634 (66%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLV E +DN++DEA AGY ++IEV + D S++V DNGRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTINEDESITVQDNGRGIPVDMHAK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTRMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + V D++GTR +FWPD VFTT + + IA R+RELAFLN
Sbjct: 149 EYEKGKPLYPVKV----VGETDKRGTRQQFWPDPTVFTTT-HYQWDIIARRMRELAFLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I LR + E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 204 GIRITLRDMRPNEEGKTREEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G +A+LTRTL + SK ++ I
Sbjct: 264 AVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADNDPAISKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT YLE +P
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALTNYLEENPKEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 383 MICDKVILAATARIAARKARESVQRKNPMTGGGLPGKLADCSNRDPKKCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ ++++E + N+I+++G+ GV+GED K+
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVMWHKVFESESVMNIIQSIGVRFGVEGEDDKEAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV- 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + EG +Y+ PPLY +V
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIQEGHLYIANPPLYLCTYKNKVK 562
Query: 529 QYCYDD----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY D A L K QR+KGLGEM QLWETT++P+ R+L+Q+ IE
Sbjct: 563 EYCYTDQQRQAFLDKYAGGVDDGKSIHTQRYKGLGEMNAEQLWETTMDPKTRLLRQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ +FS LMG V+ R++ I+ A N+D
Sbjct: 623 NAAEADEIFSMLMGDDVEPRRKFIEEHATYANID 656
>gi|363583067|ref|ZP_09315877.1| DNA gyrase subunit B [Flavobacteriaceae bacterium HQM9]
Length = 645
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/628 (47%), Positives = 418/628 (66%), Gaps = 22/628 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G RGLHHLVYE++DN++DEA AG+ I V + +NSV+V DNGRGIP+ LH
Sbjct: 29 MYIGDVGVRGLHHLVYEVVDNSIDEALAGHCDVITVTINENNSVTVTDNGRGIPVGLHKK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G + Q
Sbjct: 89 EGVSALEVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLHATVFREGKVWEQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSK---DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAF 177
+Y RGK V PV S D+ GT + F PD+ +F ++++++T+A R+RELA+
Sbjct: 147 EYERGKAV-------YPVKSTGDTDKNGTIVTFLPDRSIFQQTVEYNYDTLASRMRELAY 199
Query: 178 LNPKLTIALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGI 234
LN +TI L + +K ++ +E F + GL+E+V +L+ + P+ V+ + + I
Sbjct: 200 LNKGITITLTDARNTDDKGEFISETFHSNEGLKEFVSFLDASRNPIIGHVIAMEGEKNDI 259
Query: 235 TIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDIS 294
+++A+ + +D+Y++ + Y N+I T +GGTH+ G + LT TL S +
Sbjct: 260 PVEVAMIY-NDSYAENLHSYVNNINTHEGGTHLSGFRRGLTSTLKKFADNSGLLDKLKFE 318
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++G+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P
Sbjct: 319 IAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPADAK 378
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
+I+ K + A +A AAK+AR++V++K+V+ LPGKL+DCS T P E EIF+VEGDSAG
Sbjct: 379 TIIQKVILAAQARHAAKKAREMVQRKTVMSIGGLPGKLSDCSETDPAECEIFLVEGDSAG 438
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE--- 471
G+AKQGRDR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K
Sbjct: 439 GTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVSIGTEEDSKALNL 498
Query: 472 -ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 530
LRYHK++I+ DADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY V++G + QY
Sbjct: 499 TKLRYHKVVIMCDADVDGSHIATLILTFFFRYMKELIEQGYVYIAAPPLYLVKKGAKKQY 558
Query: 531 CYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
++D + + + N+ IQR+KGLGEM QLW+TT+NPE R ++Q+ IE EA+
Sbjct: 559 AWNDDQRDILVKEYGENS--KIQRYKGLGEMNAEQLWDTTMNPEFRTMRQVTIESMTEAD 616
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
VFS LMG V R+E I+ A N+D
Sbjct: 617 RVFSMLMGDEVPPRREFIEKNAIYANID 644
>gi|445061818|ref|ZP_21374304.1| DNA gyrase subunit B [Brachyspira hampsonii 30599]
gi|444506805|gb|ELV07081.1| DNA gyrase subunit B [Brachyspira hampsonii 30599]
Length = 636
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/621 (49%), Positives = 411/621 (66%), Gaps = 15/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG +GLHHLVYE++DN++DEA AGY NI V + DN + V D+GRGIP+D+HP
Sbjct: 27 MYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTIEKDNIIKVEDDGRGIPVDMHPK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SALE V+T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q
Sbjct: 87 LKISALEVVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVNKDGKLYRQ 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG P V V + + GT + F D +F T I +D+ +A R+RELAFLN
Sbjct: 145 VYHRGVPEEP----VKEVGTSTKTGTTVTFKADADIFETTI-YDYKILANRLRELAFLNR 199
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I L D + NE+++ GG+E ++ LN +KK LHD + K D +++A
Sbjct: 200 GIRITL--TDKREAEVVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKTEDKTDVEVA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ DAY++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE
Sbjct: 258 MQYV-DAYNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGL ++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K
Sbjct: 317 TREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+SA +A AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK
Sbjct: 377 IISAAQAREAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKG 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++I
Sbjct: 437 GRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GSSFDISKIRYGRVI 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELK 538
I+ DAD+DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D +
Sbjct: 496 IMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFVYAYSDEQRD 555
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
K+ S + Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG
Sbjct: 556 KILSE-NKDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMG 614
Query: 599 ARVDTRKELIQNAANLV-NLD 618
V R++ I++ A V NLD
Sbjct: 615 DEVKPRRDFIESNARYVKNLD 635
>gi|404404168|ref|ZP_10995752.1| DNA gyrase subunit B [Alistipes sp. JC136]
Length = 652
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/626 (48%), Positives = 424/626 (67%), Gaps = 17/626 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHLVYE++DN++DEA AGY ++I+V + DNS++V DNGRGIP D H
Sbjct: 35 MYIGDIGEKGLHHLVYEVVDNSIDEALAGYCTDIDVTINEDNSITVKDNGRGIPTDFHEK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVW-RDGMEYH 119
KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS L + RDG Y
Sbjct: 95 EGKSALEVVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTLLIAEIHSRDGKIYR 152
Query: 120 QKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLN 179
Q YS+G P T V V +GT I F PD +FT ++ + +A R+RELAFLN
Sbjct: 153 QTYSKGAP----TSKVEVVGECSDRGTIITFKPDGSIFTHTTEYKYEILANRLRELAFLN 208
Query: 180 PKLTIALRKEDSDPEKNQYNEYFFAG-GLEEYVQWLN-TDKKPL-HDVVGFRKDVDGITI 236
+++ L + SD E ++F++ GL+E+V++L+ T P+ ++ + +G+ +
Sbjct: 209 KGISLNLYDKRSDEEGKTREDHFYSEEGLKEFVKYLDATRGTPIVEQIIYLDTEKNGVPV 268
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q+ +D++S+ + Y N+I TI+GGTH+ G + +LTRTL + S + ++
Sbjct: 269 EVAMQY-NDSFSENVHSYVNNINTIEGGTHLTGFRRALTRTLKKYAEDSGMLAKLKFDIN 327
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT ++SV+V P+FEGQTKT+LGN EV VDQ++ L +YLE +P +I
Sbjct: 328 GDDFREGLTAVVSVKVQEPQFEGQTKTKLGNDEVSAAVDQAMASALGQYLEENPKDAKAI 387
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A AA+ AR+LV++K+VL + LPGKLADCSS +EIF VEGDSAGG+
Sbjct: 388 VQKVILAATARHAARHARELVQRKTVLSGAGLPGKLADCSSRDRSIAEIFFVEGDSAGGT 447
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EA 472
AK GRDR FQAI+PLRGKILN+E+ E M++NEEI+N+ ALG+ + E+ K E
Sbjct: 448 AKSGRDRNFQAIMPLRGKILNIEKAQEHRMWENEEIKNMFTALGVTIGTEEDSKALNLEK 507
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRY KIII+TDADVDG+HI TL+LTFF+R K L + G +Y+ PPLY V++GKQ +YC+
Sbjct: 508 LRYDKIIIMTDADVDGSHIATLMLTFFFRKMKELIENGHVYIATPPLYLVKKGKQERYCW 567
Query: 533 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 592
+ E ++ + F + +QR+KGLGEM QLWETT+NP+ R+L+Q+ IE+AAEA+ +
Sbjct: 568 TEKERDEITAEFGKGS--HVQRYKGLGEMNAHQLWETTMNPDTRILRQVNIENAAEADRI 625
Query: 593 FSSLMGARVDTRKELIQNAANLVNLD 618
FS LMG V R+E I+ A+ N+D
Sbjct: 626 FSMLMGDEVPPRREFIEKNAHYANID 651
>gi|56961788|ref|YP_173510.1| DNA gyrase subunit B [Bacillus clausii KSM-K16]
gi|56908022|dbj|BAD62549.1| DNA gyrase subunit B [Bacillus clausii KSM-K16]
Length = 641
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/621 (49%), Positives = 411/621 (66%), Gaps = 13/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ I+V + N+++V DNGRGIP+ +
Sbjct: 30 MYIGSTSQRGLHHLVWEIVDNSIDEAMAGFCDEIKVTIEEGNALTVEDNGRGIPVGIQEK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++T LHAGGKFGG S LHGVG SVVNALS L V V DG + Q
Sbjct: 90 MGRPAVEVIMTTLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTHLTVNVHLDGKIHSQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
YSRG P LT + D+ GT I F PD ++F ++FD+ T+A RIRELAFLN
Sbjct: 148 SYSRGVPDADLTV----IGETDKTGTTITFQPDPEIFRETVEFDYETLAARIRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
LTI + ED E + Y + GG+ +V+ LN K+ LH+ + + DGI++++A
Sbjct: 204 GLTIKI--EDKRTEDGKKATYHYEGGISSFVKHLNRSKETLHEEPIYVESEKDGISVEVA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D ++ ++ +AN+I T +GGTH G K LTR +N +K+ K+ D +LSGE
Sbjct: 262 VQY-NDGFTSSIYSFANNINTHEGGTHESGFKTGLTRVINDYARKNGLFKENDPNLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV++P P+FEGQTKT+LGN E R + D E +L +P V I+ K
Sbjct: 321 VREGLTAIISVKIPEPQFEGQTKTKLGNSEARTITDSLFSESFARFLSENPGVARKIVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A AAK+AR+L R+KS L SSLPGKL DC+S SE+FIVEGDSAGGSAK
Sbjct: 381 GLMASRAREAAKKARELTRRKSALEVSSLPGKLTDCTSKDASISELFIVEGDSAGGSAKG 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRD FQAILPLRGKILNVE+ + N EI+ +I A+G G+ G++F RYHKI+
Sbjct: 441 GRDPHFQAILPLRGKILNVEKARLDKILANNEIRMIITAIGTGI-GDEFDISKARYHKIV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QVQYCYDDAELK 538
I+TDADVDGAHIRTL+LTFFYRY + L + G +Y+ PPLYK+E+GK V Y Y D EL
Sbjct: 500 IMTDADVDGAHIRTLILTFFYRYMRELLENGYVYIAQPPLYKIEQGKNNVTYVYSDRELD 559
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + S+QR+KGLGEM QLWETT++P+ R + Q+ + DA +A+ +F LMG
Sbjct: 560 AHLATVADRSKVSVQRYKGLGEMNAGQLWETTMDPQVRNMLQVTLADAIKADEIFEILMG 619
Query: 599 ARVDTRKELIQNAANLV-NLD 618
RV+ R++ IQ A+ V NLD
Sbjct: 620 DRVEPRRDFIQENAHYVKNLD 640
>gi|383792025|ref|YP_005476599.1| type IIA topoisomerase subunit B [Spirochaeta africana DSM 8902]
gi|383108559|gb|AFG38892.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B
subunit [Spirochaeta africana DSM 8902]
Length = 636
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 317/622 (50%), Positives = 424/622 (68%), Gaps = 15/622 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG GLHHLVYE++DN++DEA AGY S I V + N + V DNGRGIP D+HPA
Sbjct: 25 MYIGSTGVDGLHHLVYEVVDNSIDEALAGYCSEITVQIEPGNIIQVTDNGRGIPTDIHPA 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SA+E VLT LHAGGKF S Y VSGGLHGVG+SVVNALSE EV V + G + Q
Sbjct: 85 EGISAMEVVLTRLHAGGKFDKGS--YKVSGGLHGVGVSVVNALSEWTEVRVHQKGEVHFQ 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY RG P + + + D GT +RF PD Q+F F + ++ R+RELAFLN
Sbjct: 143 KYHRGVPEKPVEV----IGTTDITGTVVRFRPDDQIFE-GTDFSFDILSTRLRELAFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I R DS + +++ F GG+ E+VQ+LN K +H+ + F D + +++A
Sbjct: 198 GIRI--RIIDSRLPNIKQHDFIFEGGVAEFVQYLNRSKNAIHEPPIYFEAVRDDVAMEIA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
L++ +D Y++ M + N+I T +GGTH+ G KA+LTRTLN KKSK K D +LSG+
Sbjct: 256 LEY-NDGYNENMFSFVNNINTREGGTHLVGFKAALTRTLNDFAKKSKFAKKMDENLSGDD 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++SV+VP+P+FEGQTK +LGN EVR +V+ V E L + E +P V+D+I+ K
Sbjct: 315 VREGLTAVVSVKVPDPQFEGQTKGKLGNSEVRGIVESQVNESLNYFFEQNPKVVDAIIEK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S+ A KA +AA+RAR++ R+K L S+ LPGKLADCS P ++E++IVEGDSAGGSAKQ
Sbjct: 375 SMMAAKARMAARRAREMTRRKGFLESTGLPGKLADCSERDPAKTELYIVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAIL L GK+LNVE+ + + N+++Q +I ALG G +F E LRYHKII
Sbjct: 435 GRSREFQAILALWGKMLNVEKARQDKVLANDKLQPIISALGASA-GNEFNVEKLRYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDG+HIRTLLLTFFYRY ++G IY+ +PPLYK+ GK V+Y + DAE +
Sbjct: 494 IMADADVDGSHIRTLLLTFFYRYMTEALEKGYIYIAMPPLYKMWVGKDVRYAFTDAERDR 553
Query: 540 VKSSFPS--NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
+ + ++QR+KGLGEM P QLWETT+NPE R + ++ ++DA EA +FS LM
Sbjct: 554 TLAEMRQIHTSTINMQRYKGLGEMNPDQLWETTMNPETRSIMRISMDDAVEAEEIFSCLM 613
Query: 598 GARVDTRKELI-QNAANLVNLD 618
G +V R++ I +NA + NLD
Sbjct: 614 GEQVAPRRQFIEENALTVQNLD 635
>gi|340357105|ref|ZP_08679733.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sporosarcina
newyorkensis 2681]
gi|339618783|gb|EGQ23374.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sporosarcina
newyorkensis 2681]
Length = 640
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/620 (49%), Positives = 423/620 (68%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EI+DN++DEA AGY +IEV + DN + V DNGRGIP+ + +
Sbjct: 30 MYIGTTSAKGLHHLVWEIVDNSIDEALAGYCDHIEVTIEKDNWIRVDDNGRGIPVGIQES 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+E ++TVLHAGGKFGG S LHGVG SVVNALSE EV V D Y
Sbjct: 90 TGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEKTEVFVRLDQKLYAI 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++SRG PV+ + + D GT IRF D ++FT ++++T+A R+RELA+LN
Sbjct: 148 EFSRG-PVSK---ELEVIGESDETGTTIRFKADPEIFTETTVYEYSTLATRLRELAYLNR 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L I + E + K++ + + GG++ YVQ LN +K+P+ + + + DGI+I++A
Sbjct: 204 GLRITITDEREEEPKSEV--FHYEGGIKSYVQHLNENKEPIFEEPIYIEGERDGISIEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y++ +L +AN+I T +GGTH G K +LTR +N +K+ +K+ D +LSG+
Sbjct: 262 MQYNS-GYAENLLSFANNIHTYEGGTHESGFKTALTRVINDYARKNGLLKEADGNLSGDD 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IIS++ P+P+FEGQTKT+LGN EV + + E L +L +P V ++ K
Sbjct: 321 VREGLTAIISIKHPDPQFEGQTKTKLGNSEVSTITNSLFSEALQRFLIENPVVARKVVDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
S A +A LAAK AR+L R+KS L SSLPGKL+DCSS P SE++IVEGDSAGGSAK
Sbjct: 381 STMAARARLAAKNARELTRRKSALEVSSLPGKLSDCSSRDPSISELYIVEGDSAGGSAKN 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N EI+ +I ALG G+ G +F + RYHK++
Sbjct: 441 GRDRHFQAILPLRGKILNVEKARLDRILGNAEIRMIITALGTGI-GSEFDLQKARYHKLV 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFF+R+ + L + G +Y+ PPLY+V GK QYCYD+ L++
Sbjct: 500 IMTDADVDGAHIRTLLLTFFFRFMRPLIEAGYVYIAQPPLYRVRAGKNEQYCYDEEALQE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ S P++ I R+KGLGEM P QLWETT++P++R Q+ +EDA EA+ F LMG
Sbjct: 560 ILRSMPASPKPDITRYKGLGEMNPEQLWETTMDPDKRTFLQVRLEDAMEADATFEELMGD 619
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R++ I+ NA + N+D
Sbjct: 620 EVEPRRKFIEDNAVYVQNID 639
>gi|34541335|ref|NP_905814.1| DNA gyrase subunit B [Porphyromonas gingivalis W83]
gi|188994277|ref|YP_001928529.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277]
gi|334146408|ref|YP_004509335.1| DNA gyrase subunit B [Porphyromonas gingivalis TDC60]
gi|419970237|ref|ZP_14485743.1| DNA gyrase, B subunit [Porphyromonas gingivalis W50]
gi|34397651|gb|AAQ66713.1| DNA gyrase, B subunit [Porphyromonas gingivalis W83]
gi|188593957|dbj|BAG32932.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277]
gi|333803562|dbj|BAK24769.1| DNA gyrase, B subunit [Porphyromonas gingivalis TDC60]
gi|392611239|gb|EIW93981.1| DNA gyrase, B subunit [Porphyromonas gingivalis W50]
Length = 654
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/628 (46%), Positives = 420/628 (66%), Gaps = 18/628 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLVYE++DN++DEA AGY N+EV + DNS++V DNGRGIP+D H
Sbjct: 34 MYIGDISEKGLHHLVYEVVDNSIDEALAGYCDNVEVIIEEDNSITVRDNGRGIPVDYHEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE VLTVLHAGGKF S Y VSGGLHGVG+S VNALS L V+R+G + Q
Sbjct: 94 EGKSALEVVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTYLRAEVYRNGKIHMQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++S GKP+ + + S +R GT I+F PD +F+ ++ ++ +A R+REL++LN
Sbjct: 152 EFSCGKPLHDVEV----IGSTERTGTTIQFKPDSSIFSVT-EYQYSILAKRLRELSYLNA 206
Query: 181 KLTIALRKEDSDPEKNQ-YNEYFFAG--GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITI 236
+T+ L + + E Y + F GL+E+V+ L+ K+PL D V+ + GI +
Sbjct: 207 GITLTLTDKRTLKEDGSGYKQDVFRSEEGLKEFVRHLDRMKEPLVDNVIHIVTEKQGIPV 266
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+ + + +Y + + Y N I TI+GGTH+ G + LTRTL SK + + ++
Sbjct: 267 EVAMTYNT-SYLENVYSYVNDINTIEGGTHLAGFRRGLTRTLKKYATDSKLLDKVKVEIT 325
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ REGLT +IS++V P+FEGQTKT+LGN EV VD +V E L YLE HP I
Sbjct: 326 GDDFREGLTAVISIKVAEPQFEGQTKTKLGNNEVTGAVDMAVSEALEYYLEEHPKEAKLI 385
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K + A A AA++AR++V++KS L LPGKLADCSS PE+ E+F+VEGDSAGG+
Sbjct: 386 VDKVVLAATARQAARKAREMVQRKSPLSGGGLPGKLADCSSKDPEQCELFLVEGDSAGGT 445
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EA 472
AKQGRDR FQAILPLRGKILNVE+ + ++++EEI+N+ ALG+ + E+ K
Sbjct: 446 AKQGRDREFQAILPLRGKILNVEKAMQHKVFESEEIRNIYTALGVTIGTEEDSKALNLSK 505
Query: 473 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 532
LRYHK++I+TDADVDG+HI TL+LTFF+R +TL + G +++ PPLY ++GK+ +YC+
Sbjct: 506 LRYHKVVIMTDADVDGSHIATLILTFFFRNMRTLIENGYVFIATPPLYLCKKGKEQEYCW 565
Query: 533 DDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ + + + + + +QR+KGLGEM QLWETT++PE+R L+++ IE+AAEA+
Sbjct: 566 TEQQRQAFVDRYADGNESRVHVQRYKGLGEMNEEQLWETTMDPEKRTLRKVTIENAAEAD 625
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A +D
Sbjct: 626 AIFSMLMGDEVGPRREFIEENATYARID 653
>gi|153939432|ref|YP_001389375.1| DNA gyrase subunit B [Clostridium botulinum F str. Langeland]
gi|384460465|ref|YP_005673060.1| DNA gyrase subunit B [Clostridium botulinum F str. 230613]
gi|152935328|gb|ABS40826.1| DNA gyrase, B subunit [Clostridium botulinum F str. Langeland]
gi|295317482|gb|ADF97859.1| DNA gyrase, B subunit [Clostridium botulinum F str. 230613]
Length = 637
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/621 (50%), Positives = 437/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AG+ ++IEV + DNS++V D+GRG+P+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEIVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E ++T+LHAGGKFGG S LHGVG SVVNALSE EV V R+G + Q
Sbjct: 89 VKKPAVEVIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCEVEVRREGHIWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN
Sbjct: 147 RFERGITKTGLDI----VGDTEDHGTKIYFKPDIEIFD-ELEFEYDTLAQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLA 239
+ I+L E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A
Sbjct: 202 GIKISLTDERYDKKEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+
Sbjct: 258 MQY-NDGYAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDTDKNLSGDD 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K
Sbjct: 317 VREGLTAVISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
LSA +A AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQ
Sbjct: 377 GLSASRAREAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++II
Sbjct: 437 GRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFDIEKIRYNRII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIFKAKKEIYVYSDPELDA 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ +IQR+KGLGEM P QLW+TT++PE R L Q+ IEDA A+ +F+ LMG
Sbjct: 556 ALLELGGKDTNTNIQRYKGLGEMNPEQLWDTTMDPEHRTLLQVTIEDAMVADEIFTILMG 615
Query: 599 ARVDTRKELIQNAAN-LVNLD 618
+V+ R+E I+N A+ +VNLD
Sbjct: 616 TKVEPRREFIENNADKVVNLD 636
>gi|431081762|ref|ZP_19495852.1| DNA gyrase subunit B [Enterococcus faecium E1604]
gi|431116731|ref|ZP_19497997.1| DNA gyrase subunit B [Enterococcus faecium E1613]
gi|430565694|gb|ELB04840.1| DNA gyrase subunit B [Enterococcus faecium E1604]
gi|430568511|gb|ELB07558.1| DNA gyrase subunit B [Enterococcus faecium E1613]
Length = 648
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/624 (50%), Positives = 430/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DE AG+A+ I V + DNS++V D+GRGIP+D+
Sbjct: 34 MYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVIIEKDNSITVIDDGRGIPVDIQAK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGK GY VSGGLHGVG SVVNALS L+V V+++G Y+Q
Sbjct: 94 TGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTQLDVKVYKEGNVYYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +FD + +A RIRELAFLN
Sbjct: 152 EYRRGAVVDDLKI----IEQTDRHGTTVHFMPDPEIFTETTEFDFSKLATRIRELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I++ ED E+ NEY + GG++ YV++LN +K + + V + I ++++
Sbjct: 208 GMRISI--EDKREEEPVINEYHYDGGIKSYVEYLNANKTVIFPEPVYLEGEQQDIAVEVS 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH G K +LTR +N +K K +K+ D +L+GE
Sbjct: 266 MQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTRVINDYARKQKLMKENDDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ ++L +P V I+ K
Sbjct: 325 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFMKFLLENPSVGRQIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 385 GLLASRARLAAKRAREVTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 504 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKNAEE 563
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
ELK+V +S P++ S+QR+KGLGEM QLWETT++P RM+ ++ ++DA A+ +F
Sbjct: 564 ELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMDPSNRMMARVSVDDAIAADQIFEM 623
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 624 LMGDRVEPRRAFIEENAHYVKNLD 647
>gi|313884315|ref|ZP_07818078.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
gi|312620468|gb|EFR31894.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
Length = 639
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 422/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T GLHHLV+EI+DN++DEA AGY +IEV + ADNS++V DNGRGIP+D+
Sbjct: 30 MYIGTTSIDGLHHLVWEIVDNSIDEALAGYCDHIEVFIEADNSITVIDNGRGIPVDIQSK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A ETV TVLHAGGKFG S Y VSGGLHGVG +VVNALS L + ++R+G +H
Sbjct: 90 TGRPAAETVYTVLHAGGKFGNDS--YKVSGGLHGVGAAVVNALSTHLTLEIFREGKIHHL 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RG +T + + + GT++ F PD +FT F + + RI+ELAFLN
Sbjct: 148 EFERG----LVTKELEVIGETELVGTKVNFVPDGTIFTDTTDFKYERLKDRIQELAFLNR 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I+L ED E+ + +F+ GGL+ +++ LN KKPLH+ F + ++D I +++A
Sbjct: 204 GLRISL--EDKREERQASDSFFYEGGLKSFIEHLNHAKKPLHEEPIFLEGEMDDIAVEIA 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D+YS +L +AN+I T +GG H G K +LTR +N + + +KD D +LSGE
Sbjct: 262 LQY-TDSYSTNLLSFANNIHTHEGGMHESGFKTALTRIINDYARNNNLLKDSDDNLSGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
REGLT IISV+ P+P+FEGQTKT+LGN EVR +VD+ +L +P V I+ K
Sbjct: 321 TREGLTAIISVKHPDPQFEGQTKTKLGNSEVRTIVDRLFTAEFNTFLLENPRVAKIIVEK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AAKRAR++ R+KS L ++LPGKLADCSS E+ E+FIVEGDSAGGSAKQ
Sbjct: 381 GILAARARSAAKRAREMTRKKSGLEIANLPGKLADCSSKEAEKCELFIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R +QAILP+RGKILNVE+ + NEEI+++ A+G G G +F +RYHK+I
Sbjct: 441 GRSRMYQAILPIRGKILNVEKATMDRILANEEIRSMFTAMGTGF-GSEFDVNNVRYHKLI 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT +RY + L + G +Y+ PPLY+V+ GK+ Y D EL K
Sbjct: 500 IMTDADVDGAHIRTLLLTLIFRYMRPLIEAGYVYIAQPPLYQVKVGKKETYLDTDEELNK 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + P +A Y +QR+KGLGEM QLWETT+NPE R L ++ +EDA A+ V S LMG
Sbjct: 560 WRKANP-DARYKLQRYKGLGEMDYEQLWETTMNPENRRLLRVKVEDAEVADQVMSMLMGE 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V+ R+ I+ NA + NLD
Sbjct: 619 DVEPRRAFIEDNAVYVQNLD 638
>gi|72160412|ref|YP_288069.1| DNA gyrase subunit B [Thermobifida fusca YX]
gi|71914144|gb|AAZ54046.1| DNA gyrase subunit B [Thermobifida fusca YX]
Length = 661
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/636 (50%), Positives = 435/636 (68%), Gaps = 27/636 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV E++DN+VDEA AGYA+ IEV LLAD V V DNGRGIP+D HP
Sbjct: 39 MYIGSTGERGLHHLVQEVVDNSVDEALAGYATAIEVTLLADGGVRVTDNGRGIPVDPHPV 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K A+E VLT LHAGGKF S Y+VSGGLHGVG+SVVNALS LEV V RDG + Q
Sbjct: 99 EKKPAVELVLTTLHAGGKF--DSKSYAVSGGLHGVGVSVVNALSTRLEVEVRRDGYLWTQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y KPVT L + + D GT+I FWPD +F T F+ T++ R++E+AFLN
Sbjct: 157 SYEMTKPVTEL----IRREPTDETGTQITFWPDGSIFETTT-FNFETLSRRLQEMAFLNK 211
Query: 181 KLTIALRKEDSDPE----KNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGIT 235
L+I +R D PE Y++ GGL ++V+ LN K+P+H ++ F + DGI
Sbjct: 212 GLSITIR--DERPEFVGDSPVTQTYYYEGGLSDFVRHLNATKEPVHSSIIAFEEAGDGIA 269
Query: 236 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 295
+++A+QW + +Y+ ++ +AN+I T +GGTH EG +A+LT +N + K ++DKD +L
Sbjct: 270 VEIAMQW-NQSYTSSVHTFANTINTAEGGTHEEGFRAALTSIVNRYARDQKLLRDKDENL 328
Query: 296 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 355
+G+ +REGLT I+SV++ +P+FEGQTKT+LGN E + V + EYL ++L+ +P
Sbjct: 329 TGDDIREGLTAIVSVKLADPQFEGQTKTKLGNTEAKSFVQKVCHEYLRDWLDRNPGEAKD 388
Query: 356 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 415
I++K+ A +A +AA++AR+L R+K++L S+SLPGKLADC ST PE E++IVEGDSAGG
Sbjct: 389 IVTKATQAARARIAARQARELTRRKTLLESTSLPGKLADCQSTDPERCEVYIVEGDSAGG 448
Query: 416 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 475
SAK GRD +QAILP+RGKILNVE+ + KN E+Q +I ALG G+ +DF LRY
Sbjct: 449 SAKGGRDPYYQAILPIRGKILNVEKARIDRILKNNEVQAIITALGTGIH-DDFDITKLRY 507
Query: 476 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE---RGKQVQYCY 532
HKII++ DADVDG HIRTLLLT +R+ K L + G +Y+ PPLYK++ RG V Y Y
Sbjct: 508 HKIILMADADVDGQHIRTLLLTLLFRFMKPLIEAGHVYLAQPPLYKIKWDPRGTDVDYAY 567
Query: 533 DDAEL-KKVKSSFPSNALYS-----IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 586
D E +K+ + + +QRFKGLGEM P +LWETT++PE+R+L Q+ ++DA
Sbjct: 568 SDRERDEKIAAGIAAGKKDPRPRDLVQRFKGLGEMNPSELWETTMDPERRVLLQVTLDDA 627
Query: 587 AEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
A+A+ +FS LMG V++R+ IQ A V LDI
Sbjct: 628 AQADEMFSVLMGEDVESRRAFIQRNARDVRF--LDI 661
>gi|323487683|ref|ZP_08092941.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2]
gi|323398417|gb|EGA91205.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2]
Length = 642
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/620 (49%), Positives = 414/620 (66%), Gaps = 12/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLV+EI+DN++DEA AG+ + I V++ DN + V DNGRGIP+ +
Sbjct: 32 MYIGSTGARGLHHLVWEIVDNSIDEALAGHCTEIRVSIEPDNWIRVEDNGRGIPVGMQEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALSE+ EV V RD ++
Sbjct: 92 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSETTEVYVNRDEKRHYI 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
K+ RG L + D GT IRF D ++F ++ + + R+RELA+LN
Sbjct: 150 KFERGAVTEELNV----IGDSDHTGTTIRFKADAEIFKETTVYEFDILDHRLRELAYLNR 205
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
L I ++ E EK + Y F GG++ YV+ LN K PLH+ F + DGIT+++A
Sbjct: 206 GLKIVVKDEREGEEKEKI--YHFEGGIKSYVEHLNKSKDPLHEEAIFVEAERDGITVEVA 263
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + Y+ + +AN+I T +GGTH G K +LTR +N G+K +K++D++L+G+
Sbjct: 264 MQYNA-GYAANIFSFANNINTHEGGTHESGFKTALTRVVNDYGRKKSMLKEQDLNLTGDD 322
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV+ P+P+FEGQTKT+LGN EV +V+ +L +P V I+ K
Sbjct: 323 VREGLTAIISVKHPDPQFEGQTKTKLGNTEVSTIVNNLFSNGFERFLLENPAVSKKIVEK 382
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A A +AAK+AR+ R+KSVL SSLPGKLADCSS P+ SEI+IVEGDSAGGSAK
Sbjct: 383 GIMASHARMAAKKAREFTRRKSVLEVSSLPGKLADCSSRDPKISEIYIVEGDSAGGSAKS 442
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKILNVE+ + N+EI+N+I ALG G+ GE+F E RYHKI+
Sbjct: 443 GRDRHFQAILPLRGKILNVEKARLDRILTNDEIRNIITALGTGI-GEEFNLEKARYHKIV 501
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF +RY + L + G IY+ PPL+++++GK V+Y Y DA+LK
Sbjct: 502 IMTDADVDGAHIRTLLLTFLFRYMRPLLEAGYIYIAQPPLFQIKQGKHVEYVYTDAQLKT 561
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ +IQR+KGLGEM QLW+TT++P+ R L Q+ + DA A+ F LMG
Sbjct: 562 ALENLSPTPKPNIQRYKGLGEMNATQLWDTTMDPDVRTLLQVTLNDAMVADETFHILMGD 621
Query: 600 RVDTRKELI-QNAANLVNLD 618
V+ R+ I +NA + NLD
Sbjct: 622 EVEPRRNFIEENAKYVKNLD 641
>gi|448358868|ref|ZP_21547542.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
gi|445644548|gb|ELY97561.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
Length = 643
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 300/616 (48%), Positives = 417/616 (67%), Gaps = 11/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ I V++ D SVSVAD+GRGIP+D H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDEITVSINEDGSVSVADDGRGIPVDTHEE 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE +LTVLHAGGKF S Y VSGGLHGVG+SVVNALS LE TV RDG Y
Sbjct: 87 YDRPALEVILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTRLETTVKRDGGVYKH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLN 179
+ G+PV + V + + GT I+FWPD+ +F TT + F +T++ R+RELAFLN
Sbjct: 145 AFEIGEPVGDME-RVRDMKPDEETGTEIQFWPDEDIFETTDMSF--STLSNRLRELAFLN 201
Query: 180 PKLTIALRKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITI 236
+ I LR E E + Y + GG+ E+V++LN + +H D++ F + + +
Sbjct: 202 SGVRITLRDERERTEAGEAVAETYEYEGGIREFVEYLNETRSAMHEDIIYFEDEDQNVRV 261
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q + ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D + +L
Sbjct: 262 EVAIQ-ATKELQGSIHAFANNINTREGGTHLTGFKTALTRVINDYGNENNLLSDIEENLK 320
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE +REGLT ++SV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E HPD +I
Sbjct: 321 GEDIREGLTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDCLGTYFEEHPDTAQAI 380
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K++ A KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGS
Sbjct: 381 VMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGS 440
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQ R+ FQA+LP++GKILNVE+ + +N+EI+N+I +G G+ G++F E +RY
Sbjct: 441 AKQARNPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITGIGAGI-GDEFDVEDVRYK 499
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII+ TDADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + D E
Sbjct: 500 KIIMATDADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDVE 559
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ +QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS L
Sbjct: 560 RDEIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVL 619
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I+ A
Sbjct: 620 MGDAVEPRKQFIKENA 635
>gi|401683255|ref|ZP_10815143.1| DNA gyrase, B subunit [Streptococcus sp. AS14]
gi|400183333|gb|EJO17589.1| DNA gyrase, B subunit [Streptococcus sp. AS14]
Length = 649
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/625 (48%), Positives = 427/625 (68%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V DNGRGIP+D+
Sbjct: 34 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIQVFIEKDNSITVVDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+V V+++G ++Q
Sbjct: 94 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTQLDVRVYKNGQIHYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG+ V L + DR GT + F PD ++FT ++FD + R++ELAFLN
Sbjct: 152 EYSRGQVVADLEI----IGETDRTGTTVHFTPDPEIFTETVEFDFEKLNKRVQELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ + E Q +Y + GG+ YVQ++N +K + + + ++D IT+++A
Sbjct: 208 GLRISITDKRDGME--QAKDYHYEGGIASYVQYINENKDVIFETPIYTDGEMDDITVEVA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR +N KK+K +K+ + +L+GE
Sbjct: 266 MQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKLLKENEDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +++L +P V I+ K
Sbjct: 325 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFSDFLLENPAVARKIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS P+E+E+FIVEGDSAGGSAK
Sbjct: 385 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDPQETELFIVEGDSAGGSAKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY-----CYDD 534
I+TDADVDGAHIRTLLLT YRY K + + G +Y+ PP+Y V+ G V+ +
Sbjct: 504 IMTDADVDGAHIRTLLLTLIYRYMKPVLEAGFVYIAQPPIYGVKVGSDVKEYIQPGANQE 563
Query: 535 AELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
EL+ + + + +IQR+KGLGEM QLWETT+NPE R++ ++ ++DAAEA+ +F
Sbjct: 564 EELQAALARYSEGRSKPTIQRYKGLGEMDDHQLWETTMNPEHRLMARVSVDDAAEADKIF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+ A LD
Sbjct: 624 DMLMGDRVEPRREFIEENAVYSTLD 648
>gi|18308988|ref|NP_560922.1| DNA gyrase subunit B [Clostridium perfringens str. 13]
gi|18143663|dbj|BAB79712.1| DNA gyrase subunit B [Clostridium perfringens str. 13]
Length = 638
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/624 (50%), Positives = 436/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSV+V D+GRG+P+ +HP
Sbjct: 29 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVYIHKDNSVTVVDDGRGMPVGIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++TVLHAGGKFGG S LHGVG SVVNALSE EV V RDG + Q
Sbjct: 89 MGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSELCEVIVTRDGYVWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG +T L + + GT++ F PD ++F ++D ++ R+RELAFLN
Sbjct: 147 SYKRGAVLTGLE----RIGEAEGSGTKVHFKPDHEIFEET-EYDFEILSQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L E D K + Y + GG++ +V +LN +K+ LHD V G + DGI +
Sbjct: 202 GINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRNKEVLHDEPIYVEGLK---DGIAV 256
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQ+ D +++ + +AN+I T++GGTH+ G K +LTR +N G++ +K+ D +LS
Sbjct: 257 EVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTALTRVMNDYGRRFGHLKESDKNLS 315
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ +REGLT ++SV++ +P+FEGQTKT+LGN EVR VD E ++ +LE +P+V I
Sbjct: 316 GDDIREGLTAVVSVKISDPQFEGQTKTKLGNSEVRSAVDSISGEGISTFLEENPEVGKII 375
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AA+RAR+L R KSVL SSLPGKLADCSS P+E EI+IVEGDSAGGS
Sbjct: 376 IEKALLASRAREAARRARELTR-KSVLERSSLPGKLADCSSKDPKECEIYIVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE++ + ++ I++++ A+G G+ G +F E +RY+
Sbjct: 435 AKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIRSMVTAIGAGI-GPEFDIEKIRYN 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYK+ +GKQ +Y Y DA
Sbjct: 494 RIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVYIAQPPLYKISKGKQERYAYSDAA 553
Query: 537 LKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ F ++ ++QR+KGLGEM QLWETT++PE R+L + IEDA A+ +F+
Sbjct: 554 ADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMDPESRILLRADIEDAMVADEIFTI 613
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+ NLD
Sbjct: 614 LMGDKVEPRREFIQKNAKNVSNLD 637
>gi|261878836|ref|ZP_06005263.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
gi|270334578|gb|EFA45364.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
Length = 657
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 302/634 (47%), Positives = 421/634 (66%), Gaps = 24/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHL+ E +DN++DEA AGY +IEV + DNS +V DNGRGIP+D H
Sbjct: 31 MYIGDISEKGLHHLINETVDNSIDEAMAGYCDHIEVTINEDNSCTVEDNGRGIPVDQHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSARMLSQVFRDGKAYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + + + D++GTR +FWPD +FTT F + +A R+RELA+LN
Sbjct: 149 EYEKGKPLYPVKV----IGNTDKRGTRQQFWPDPTIFTTRT-FQWDIVARRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L + + E F A GL+E+V++++ + L D V+ + + G+ I++
Sbjct: 204 GIKITLTDLRPNEDGKIRQEVFHAKDGLKEFVRYIDRHRTHLFDDVIYLKTEKQGVPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR L + +K ++ +
Sbjct: 264 AIMYNTD-YSENLHSYVNNINTIEGGTHVTGFRQALTRVLKNYADNDPQIAKQIEKAKVE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVNQAVGEALTNYLEEHPTEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++KSV+ LPGKLADCS+ P+ EIF+VEGDSAG
Sbjct: 383 QICEKVVLAATARVAARKARESVQRKSVMTGGGLPGKLADCSNKDPKLCEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED ++
Sbjct: 443 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDDREAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK +GK
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKIIEEGHLYIATPPLYKCTYKGKNS 562
Query: 529 QYCYDD----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIE 584
+YCY++ A +K + + QR+KGLGEM P QLWETT++P R+LKQ+ IE
Sbjct: 563 EYCYNEGQRLAYFQKYANGEEDSKNIHTQRYKGLGEMNPDQLWETTMDPANRLLKQVTIE 622
Query: 585 DAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
+AAEA+ FS LMG V+ R+E I+ A N+D
Sbjct: 623 NAAEADETFSMLMGDDVEPRREFIEANAAYANID 656
>gi|259047900|ref|ZP_05738301.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175]
gi|259035577|gb|EEW36832.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175]
Length = 645
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 302/623 (48%), Positives = 416/623 (66%), Gaps = 11/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A++IE+ + +N + V D+GRGIP+D+
Sbjct: 33 MYIGSTSSAGLHHLVWEIVDNSIDEALAGFATHIEIEITKENHIRVTDDGRGIPVDIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGK GY VSGGLHGVG SVVNALS L V V++DG Y Q
Sbjct: 93 TGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSTDLTVQVFKDGNIYEQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG + L + + D+ GT + F PD ++F F+ + +A R+RELAFLN
Sbjct: 151 SYKRGAVLEDLKI----IGTTDKHGTSVYFVPDPEIFQETTVFEFDKLANRVRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L + + D PE+ + + GG++ YV+ LN K+ L + + + DGI +++A
Sbjct: 207 GLKLTIT--DFRPEEPVRKSFCYEGGIKSYVEHLNKSKQVLFEEPIYVEGEQDGIQVEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y +L + N+I T +GGTH G+K +LTR +N ++ K +K+ + LSGE
Sbjct: 265 MQYTS-GYHTNLLSFTNNIHTYEGGTHESGMKTALTRVINDYARRQKLMKENEEKLSGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN E R + D+ + ++L +P V I+ K
Sbjct: 324 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEARTITDRLFSTHFDKFLMENPQVARKIVEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+KS L S+LPGKLADCSS P SE+FIVEGDSAGGSAKQ
Sbjct: 384 GILASKARLAAKRAREVTRKKSGLEISNLPGKLADCSSNDPTISELFIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 444 GRSRHFQAILPIRGKILNVEKATLDKILANEEIRSLFTAMGTGFGG-DFDLSKARYQKLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDG+HIRTLL+T FYRY + + G IY+ PPLYK+++GK Y +D EL+
Sbjct: 503 IMTDADVDGSHIRTLLITLFYRYMRPAVEAGYIYIAQPPLYKLKQGKNEYYIQNDKELEA 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
P++ + R+KGLGEM QLWETT+NPE R + Q+ +EDAAEA+ + LMG
Sbjct: 563 KLKELPAHPKPQLSRYKGLGEMDAEQLWETTMNPENRSMLQVSVEDAAEADQILDILMGD 622
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
RV+ R+E I++ A +N++ LDI
Sbjct: 623 RVEPRREFIESNAKYINMEDLDI 645
>gi|431798338|ref|YP_007225242.1| DNA gyrase subunit B [Echinicola vietnamensis DSM 17526]
gi|430789103|gb|AGA79232.1| DNA gyrase, B subunit [Echinicola vietnamensis DSM 17526]
Length = 652
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 301/628 (47%), Positives = 425/628 (67%), Gaps = 18/628 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG G +GLHHL++E++DN++DEA AG+ I V +L DNSV V DNGRGIP D+H
Sbjct: 32 MYIGDVGVKGLHHLIWEVVDNSIDEALAGHCDTIHVTVLEDNSVQVEDNGRGIPTDMHEK 91
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+SALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ TV+R+G + Q
Sbjct: 92 EKRSALEVVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKATVYRNGKVFEQ 149
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+YSRG P T +T + +++GT I F PD +FT ++ + TIA R+RE+AFLN
Sbjct: 150 EYSRGVPQTGVT----EIGETEKRGTIIHFVPDGDIFTVT-EYKYETIANRLREMAFLNA 204
Query: 181 KLTIALRK-EDSDPEKN-QYNEYFFAGGLEEYVQWLN-TDKKPLHDVVGFRKDVDGITID 237
+ I + + D E N + +E+F GGL E+V++L+ T +K + + + + + + +
Sbjct: 205 GVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQEPIYIESEKNAVPVQ 264
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + S ++S+ ++ Y N+I T +GGTH+ G + +LTRTL KS + +SG
Sbjct: 265 VAMSYNS-SFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYADKSGMLDKVKFDVSG 323
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L +LE HP I+
Sbjct: 324 DDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVLQYWLEEHPKEAKIIV 383
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AA++AR++V++K+VL LPGKLADC++T PE E+++VEGDSAGGSA
Sbjct: 384 GKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEVCELYLVEGDSAGGSA 443
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----AL 473
KQGRDR FQAILPL+GKILNVE+ E +Y N+EI+N++ ALG+ + +KE L
Sbjct: 444 KQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVKFGTAEDEKELDLTNL 503
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHKI+I+TDAD+DG+HIRTL+LT F+RY ++L + G +Y+ +PPLY +++GK +YC+
Sbjct: 504 RYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPLYLLKKGKDERYCWS 563
Query: 534 DAELKKVKSSFPSNAL---YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 590
+ E K+ + IQR+KGLGEM P QLW TT++PE R LKQ+ IE AAEA+
Sbjct: 564 EDERIKLTKEMAGDGKTDNVGIQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEAD 623
Query: 591 VVFSSLMGARVDTRKELIQNAANLVNLD 618
+FS LMG V R+E I+ A +D
Sbjct: 624 HLFSMLMGDEVAPRREFIEKNAKYAKID 651
>gi|289431959|ref|YP_003461832.1| DNA gyrase subunit beta [Dehalococcoides sp. GT]
gi|288945679|gb|ADC73376.1| DNA gyrase, B subunit [Dehalococcoides sp. GT]
Length = 642
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/620 (50%), Positives = 415/620 (66%), Gaps = 16/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+ N+VDEA AG I+V + D SVSV DNGRGIP+ +H
Sbjct: 36 MYIGSTDQRGLHHLVYEIVYNSVDEAMAGVCDRIKVIMFKDGSVSVEDNGRGIPVGIHST 95
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T SALETV+TVLHAG KFGG + Y VSGGLHGVG SVVNALSE V V R+G Y Q
Sbjct: 96 TKISALETVMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALSEWTTVKVRRNGKIYQQ 153
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RGKP T L V + GT F D Q+F+T ++D T+ R+RE+A+LN
Sbjct: 154 SYLRGKPSTPLE----EVGVSEGSGTTTIFMADSQIFSTT-EYDFETLTDRLREIAYLNK 208
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L + + E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A
Sbjct: 209 GLEVYIYDEKSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D YSD+ L +AN + T+DGGTH+ G +++LTR N KSK +KD D +L G+
Sbjct: 265 IQY-NDGYSDSTLTFANCVNTVDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDD 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+ I+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K
Sbjct: 324 VREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVESAVAEQLSLYLEEHPDDTKRILEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
++A KA AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQ
Sbjct: 384 CITAAKAREAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++
Sbjct: 444 GRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGID-NDFDPSKLRYNRLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDG+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE +
Sbjct: 503 LMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSTEHWVYNDAEKEA 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + S + IQR+KGLGEM QLW TT++P R L ++ +EDAA+A+ +F+ LMG
Sbjct: 563 ILAQTKSTKV-DIQRYKGLGEMSAEQLWRTTMDPASRTLLEVKVEDAAKADQIFNLLMGG 621
Query: 600 RVDTRKELIQNAANLV-NLD 618
V RK IQ+ + V NLD
Sbjct: 622 EVAPRKAFIQSHSRTVKNLD 641
>gi|120437084|ref|YP_862770.1| DNA gyrase subunit B [Gramella forsetii KT0803]
gi|117579234|emb|CAL67703.1| DNA gyrase subunit B [Gramella forsetii KT0803]
Length = 646
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/625 (46%), Positives = 421/625 (67%), Gaps = 16/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG RGLHHLVYE++DN++DEA AG+ NI+V + DNS++ DNGRGIPIDLH
Sbjct: 30 MYIGDTGVRGLHHLVYEVVDNSIDEALAGHCDNIKVTINEDNSITTEDNGRGIPIDLHKK 89
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
SAL+ V+T + AGGKF S Y VSGGLHGVG+S VNALSE L V+RDG + Q
Sbjct: 90 EGVSALQVVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLTAIVFRDGQVWQQ 147
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y GKP+ V P + GT + F PD +FT ++++++T+A R+RELA+LN
Sbjct: 148 EYELGKPLYP----VKPTGETELSGTIVTFKPDPSIFTQTLEYNYDTLASRMRELAYLNK 203
Query: 181 KLTIAL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITID 237
+ I+L ++ D + ++++ GL+E++++L+ +++P+ DV+ + + I ++
Sbjct: 204 GIRISLTDKRNKEDNGEFVHDDFHSEEGLKEFIRFLDGNREPIIGDVISMEGEKNDIPVE 263
Query: 238 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 297
+A+ + + ++S+ + Y N+I T +GGTH+ G + LT TL S + ++G
Sbjct: 264 VAMVYNT-SFSENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADSSGLLDKVKFEITG 322
Query: 298 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 357
+ REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ +I+
Sbjct: 323 DDFREGLTAIISVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPNDAKTIV 382
Query: 358 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 417
K + A +A AAK+AR++V++K+V+ LPGKL+DCS PE+ E+F+VEGDSAGG+A
Sbjct: 383 QKVILAAQARNAAKKAREMVQRKTVMSVGGLPGKLSDCSDQDPEQCEVFLVEGDSAGGTA 442
Query: 418 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EAL 473
KQGRDR+FQAILPLRGKILNVE+ ++ NEEI+N+ ALG+ + E+ K L
Sbjct: 443 KQGRDRKFQAILPLRGKILNVEKAMSHRVFDNEEIKNIYTALGVTIGTEEDSKALNLSKL 502
Query: 474 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 533
RYHK++I+ DADVDG+HI TL+LTFF+RY K L + G IY+ PPLY V++G++ +Y +
Sbjct: 503 RYHKVVIMCDADVDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLVKKGQKKRYAWS 562
Query: 534 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
+ E ++ S+ IQR+KGLGEM QLW+TT++PE R+L+Q+ I++ EA+ +F
Sbjct: 563 EKERDEIAESYSGGV--QIQRYKGLGEMNAEQLWDTTMDPEFRILRQVNIDNGGEADRIF 620
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
S LMG V R+E I+ A N+D
Sbjct: 621 SMLMGDEVPPRREFIEKNAKYANID 645
>gi|366163637|ref|ZP_09463392.1| DNA gyrase subunit B [Acetivibrio cellulolyticus CD2]
Length = 641
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/621 (49%), Positives = 420/621 (67%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY + IE+ + DNS++ DNGRGIP+ +HP
Sbjct: 31 MYIGSTSSRGLHHLVYEIMDNSIDEALAGYCTEIEITINPDNSITNIDNGRGIPVGIHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+E V T+LHAGGKFGG GY+VSGGLHGVG SVVNALSE LEV V+RDG Y Q
Sbjct: 91 MGIPTVEVVHTILHAGGKFGGE--GYTVSGGLHGVGASVVNALSEYLEVEVYRDGNIYKQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG T L + + ++ GT+ F PD +F ++F + + R RELAFLN
Sbjct: 149 RYERGNVATKLEV----IGTTEKTGTKTTFKPDSLIFE-EMEFSFDILLNRFRELAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
L I L D PE+ + + GG+ +V+++N +K + + + DG ++++
Sbjct: 204 GLMITLI--DKRPEEPIVKKLHYEGGIISFVEYMNRNKGVIQEHPIYIDCSKDGSNVEIS 261
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y + + +AN+I T +GGTH+ G K ++T+ N +K +KD D +L+GE
Sbjct: 262 MQY-NDTYVENIFSFANNIATTEGGTHLTGFKTAITKVFNDYARKYNYLKDNDKNLAGED 320
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REGLT +ISV++ P+FEGQTKT+LGN E+R +V+ +V E L +LE +P V +IL K
Sbjct: 321 IREGLTAVISVKLQEPQFEGQTKTKLGNSEIRSLVEFTVGEKLASFLEENPSVTKTILDK 380
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L+A +A AA++ARDL R+KS L +++LPGKLADCS P EI+IVEGDSAGGSAKQ
Sbjct: 381 CLTAARAREAARKARDLTRRKSALETTTLPGKLADCSEKDPSLCEIYIVEGDSAGGSAKQ 440
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR+FQAILPL GK+LNVE+ +Y NE++ +I ALG + G+DF E LRYHKII
Sbjct: 441 GRDRKFQAILPLWGKMLNVEKSRIDKVYDNEKLLPVITALGASI-GDDFDVEKLRYHKII 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+ DADVDG HIRTLLLTF +RY K L + G +Y+ PPL+K+ +GK+ Y Y++ ++
Sbjct: 500 IMADADVDGQHIRTLLLTFMFRYMKPLVEGGYVYIAQPPLFKIAKGKEEGYAYNEKQVDN 559
Query: 540 -VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ SIQR+KGLGEM P QLWETT+NPE R + ++ + DA A+ +F+ LMG
Sbjct: 560 FINEKGWKKDECSIQRYKGLGEMNPEQLWETTMNPETRTMLRVELSDAIAADEIFTILMG 619
Query: 599 ARVDTRKELIQNAANLV-NLD 618
+V+ RKE IQ A V NLD
Sbjct: 620 DKVEPRKEFIQTHAKTVTNLD 640
>gi|110799437|ref|YP_694481.1| DNA gyrase subunit B [Clostridium perfringens ATCC 13124]
gi|168207731|ref|ZP_02633736.1| DNA gyrase, B subunit [Clostridium perfringens E str. JGS1987]
gi|168215272|ref|ZP_02640897.1| DNA gyrase, B subunit [Clostridium perfringens CPE str. F4969]
gi|170764021|ref|ZP_02637634.2| DNA gyrase, B subunit [Clostridium perfringens B str. ATCC 3626]
gi|182420561|ref|ZP_02643926.2| DNA gyrase, B subunit [Clostridium perfringens NCTC 8239]
gi|182627057|ref|ZP_02954782.1| DNA gyrase, B subunit [Clostridium perfringens D str. JGS1721]
gi|422347733|ref|ZP_16428644.1| DNA gyrase subunit B [Clostridium perfringens WAL-14572]
gi|110674084|gb|ABG83071.1| DNA gyrase, B subunit [Clostridium perfringens ATCC 13124]
gi|170660917|gb|EDT13600.1| DNA gyrase, B subunit [Clostridium perfringens E str. JGS1987]
gi|170710064|gb|EDT22246.1| DNA gyrase, B subunit [Clostridium perfringens B str. ATCC 3626]
gi|170713332|gb|EDT25514.1| DNA gyrase, B subunit [Clostridium perfringens CPE str. F4969]
gi|177907583|gb|EDT70222.1| DNA gyrase, B subunit [Clostridium perfringens D str. JGS1721]
gi|182379692|gb|EDT77171.1| DNA gyrase, B subunit [Clostridium perfringens NCTC 8239]
gi|373223711|gb|EHP46058.1| DNA gyrase subunit B [Clostridium perfringens WAL-14572]
Length = 638
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/624 (50%), Positives = 435/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSV+V D+GRG+P+ +HP
Sbjct: 29 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVYIHKDNSVTVVDDGRGMPVGIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++TVLHAGGKFGG S LHGVG SVVNALSE EV V RDG + Q
Sbjct: 89 MGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSELCEVIVTRDGYVWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG +T L + + GT++ F PD ++F ++D ++ R+RELAFLN
Sbjct: 147 SYKRGAVLTGLE----KIGEAEGSGTKVHFKPDHEIFEET-EYDFEILSQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L E D K + Y + GG++ +V +LN +K+ LHD V G + DGI +
Sbjct: 202 GINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRNKEVLHDEPIYVEGLK---DGIAV 256
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQ+ D +++ + +AN+I T++GGTH+ G K +LTR +N G++ +K+ D +LS
Sbjct: 257 EVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTALTRVMNDYGRRFGHLKESDKNLS 315
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ +REGLT ++SV++ P+FEGQTKT+LGN EVR VD E ++ +LE +P+V I
Sbjct: 316 GDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRSAVDSISGEGISTFLEENPEVGKII 375
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AA+RAR+L R KSVL SSLPGKLADCSS P+E EI+IVEGDSAGGS
Sbjct: 376 IEKALLASRAREAARRARELTR-KSVLERSSLPGKLADCSSKDPKECEIYIVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE++ + ++ I++++ A+G G+ G +F E +RY+
Sbjct: 435 AKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIRSMVTAIGAGI-GPEFDIEKIRYN 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYK+ +GKQ +Y Y DA
Sbjct: 494 RIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVYIAQPPLYKISKGKQERYAYSDAA 553
Query: 537 LKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ F ++ ++QR+KGLGEM QLWETT++PE R+L + IEDA A+ +F+
Sbjct: 554 ADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMDPESRILLRADIEDAMVADEIFTI 613
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+ NLD
Sbjct: 614 LMGDKVEPRREFIQKNAKNVSNLD 637
>gi|257885591|ref|ZP_05665244.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501]
gi|257821447|gb|EEV48577.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501]
Length = 648
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/624 (50%), Positives = 430/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DE AG+A+ I V + DNS++V D+GRGIP+D+
Sbjct: 34 MYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVIIEKDNSITVIDDGRGIPVDIQAK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGK GY VSGGLHGVG SVVNALS L+V V+++G Y+Q
Sbjct: 94 TGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTQLDVKVYKEGNVYYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +FD + +A RIRELAFLN
Sbjct: 152 EYRRGAVVDDLKI----IEQTDRHGTTVHFTPDPEIFTETTEFDFSKLATRIRELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I++ ED E+ NEY + GG++ YV++LN +K + + V + I ++++
Sbjct: 208 GMRISI--EDKREEEPVINEYHYEGGIKSYVEYLNANKTVIFPEPVYLEGEQQDIAVEVS 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH G K +LTR +N +K K +K+ D +L+GE
Sbjct: 266 MQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTRVINDYARKQKLMKENDDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ ++L +P V I+ K
Sbjct: 325 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFMKFLLENPSVGRQIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 385 GLLASRARLAAKRAREVTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 504 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKNAEE 563
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
ELK+V +S P++ S+QR+KGLGEM QLWETT++P RM+ ++ ++DA A+ +F
Sbjct: 564 ELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMDPSNRMMARVSVDDAIAADQIFEM 623
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 624 LMGDRVEPRRAFIEENAHYVKNLD 647
>gi|169343479|ref|ZP_02864479.1| DNA gyrase, B subunit [Clostridium perfringens C str. JGS1495]
gi|422872596|ref|ZP_16919081.1| DNA gyrase subunit B [Clostridium perfringens F262]
gi|169298431|gb|EDS80520.1| DNA gyrase, B subunit [Clostridium perfringens C str. JGS1495]
gi|380306482|gb|EIA18746.1| DNA gyrase subunit B [Clostridium perfringens F262]
Length = 637
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/624 (50%), Positives = 435/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNSV+V D+GRG+P+ +HP
Sbjct: 28 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVYIHKDNSVTVVDDGRGMPVGIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++TVLHAGGKFGG S LHGVG SVVNALSE EV V RDG + Q
Sbjct: 88 MGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSELCEVIVTRDGYVWKQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG +T L + + GT++ F PD ++F ++D ++ R+RELAFLN
Sbjct: 146 SYKRGAVLTGLE----KIGEAEGSGTKVHFKPDHEIFEET-EYDFEILSQRLRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L E D K + Y + GG++ +V +LN +K+ LHD V G + DGI +
Sbjct: 201 GINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRNKEVLHDEPIYVEGLK---DGIAV 255
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQ+ D +++ + +AN+I T++GGTH+ G K +LTR +N G++ +K+ D +LS
Sbjct: 256 EVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTALTRVMNDYGRRFGHLKESDKNLS 314
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ +REGLT ++SV++ P+FEGQTKT+LGN EVR VD E ++ +LE +P+V I
Sbjct: 315 GDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRSAVDSISGEGISTFLEENPEVGKII 374
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AA+RAR+L R KSVL SSLPGKLADCSS P+E EI+IVEGDSAGGS
Sbjct: 375 IEKALLASRAREAARRARELTR-KSVLERSSLPGKLADCSSKDPKECEIYIVEGDSAGGS 433
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE++ + ++ I++++ A+G G+ G +F E +RY+
Sbjct: 434 AKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIRSMVTAIGAGI-GPEFDIEKIRYN 492
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYK+ +GKQ +Y Y DA
Sbjct: 493 RIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVYIAQPPLYKISKGKQERYAYSDAA 552
Query: 537 LKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ F ++ ++QR+KGLGEM QLWETT++PE R+L + IEDA A+ +F+
Sbjct: 553 ADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMDPESRILLRADIEDAMVADEIFTI 612
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+ NLD
Sbjct: 613 LMGDKVEPRREFIQKNAKNVSNLD 636
>gi|149278877|ref|ZP_01885012.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase)
[Pedobacter sp. BAL39]
gi|149230496|gb|EDM35880.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase)
[Pedobacter sp. BAL39]
Length = 652
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/633 (48%), Positives = 437/633 (69%), Gaps = 27/633 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG TG +GLHHLVYE++DN++DEA AG+A I V +L DNS+ V DNGRGIP ++
Sbjct: 31 MYIGDTGIKGLHHLVYEVVDNSIDEALAGHADTIYVNILEDNSIRVEDNGRGIPTGINKK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
NKSALE V+TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q
Sbjct: 91 ENKSALEIVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKAEVHREGQIWMQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y+ GKP+ + V D++GT + F PD +FT ++ ++T+A R+REL+FLN
Sbjct: 149 EYNIGKPLYDVKL----VGETDKRGTIVTFSPDPTIFTQTTEYRYDTLAARLRELSFLNK 204
Query: 181 KLTIALRKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDK-----KPLHDVVGFRKDVDG 233
+ + L E ++D + N E F + GGL+E+VQ+L+ + +P++ V G + +G
Sbjct: 205 GIKLTLTDERETDADGNFITELFHSEGGLKEFVQFLDGGRPSLIAEPIY-VEGIK---NG 260
Query: 234 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 293
I ++LALQ+ +D+Y++ + Y N+I T +GGTHI G + LTRTL + KS +K+
Sbjct: 261 IPVELALQY-NDSYAENVHSYVNNINTHEGGTHIAGFRRGLTRTLKAYADKSGLLKNVKF 319
Query: 294 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 353
++G+ REGLT ++SV+V P+FEGQTKT+LGN EV VD +V E L YLE +P
Sbjct: 320 EITGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNSEVMGAVDVAVGEALNNYLEENPREA 379
Query: 354 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 413
I++K + A A AA++AR++V++KSV+ S LPGKLADCS + PE+ EI++VEGDSA
Sbjct: 380 KLIVNKVILAATARAAARKAREMVQRKSVMGGSGLPGKLADCSDSDPEKCEIYLVEGDSA 439
Query: 414 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK-- 470
GG+AKQGRDR FQAILPL+GKILNVE+ E +Y+N+EI+N+ ALG+ + ED K
Sbjct: 440 GGTAKQGRDRNFQAILPLKGKILNVEKAMEHKIYENDEIKNMFTALGVSIGTPEDDKALN 499
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 529
LRYHK++I+TDAD+DG+HI TL+LTFF+RY K L + G +Y+ PPLY+V++GK+ +
Sbjct: 500 LTKLRYHKVVIMTDADIDGSHITTLILTFFFRYMKALIEAGYVYIAAPPLYQVKKGKEHE 559
Query: 530 YCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
YC++ DA ++++K + +++ IQR+KGLGEM QLW+TTLNP+ R L Q IE+
Sbjct: 560 YCWNDQQRDAAVQRLKGAGKEESVH-IQRYKGLGEMNAEQLWDTTLNPQTRTLLQATIEN 618
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
AAE + FS LMG V R++ I+ A +D
Sbjct: 619 AAECDHTFSMLMGDEVGPRRDFIERNAKYAKID 651
>gi|221632838|ref|YP_002522060.1| DNA gyrase subunit B [Thermomicrobium roseum DSM 5159]
gi|221156882|gb|ACM06009.1| DNA gyrase, B subunit [Thermomicrobium roseum DSM 5159]
Length = 636
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/620 (51%), Positives = 422/620 (68%), Gaps = 14/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHL+YEI+DN+VDEA AGY IEV + D SV V D+GRGIP+D+HP
Sbjct: 28 MYIGSTDIRGLHHLIYEIVDNSVDEALAGYCDRIEVTIHRDGSVRVWDDGRGIPVDIHPK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
KSALE ++T LHAGGKFGG S LHGVG SVVNALSE LEVTV RDG YHQ
Sbjct: 88 VGKSALEVIMTTLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVTVRRDGKIYHQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG PVT + + + D GT F PD+ +F + + + + + R RE+A+L
Sbjct: 146 RYERGVPVTPV--ETIGETTPDDHGTETVFLPDRLIFRS-LDYQSDVLLQRFREVAYLTS 202
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI E +D + ++F GG+ +V+ LN K+ L + +++ +G +++A
Sbjct: 203 GLTIHFVDERTDLDMT----FYFEGGIVSFVRHLNRTKEVLQPQPFYVKREQNGCLVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y+++ +AN+I TIDGGTH+ G KA+LTR +N ++ +K+ D +LSGE
Sbjct: 259 IQY-TDGYAESTHAFANNINTIDGGTHVTGFKAALTRAINEYARRHGLLKENDPNLSGED 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT IISV +P P+FEGQTKT+LGN EV +V V E T YLE HP + I+ K
Sbjct: 318 VREGLTAIISVMLPEPQFEGQTKTKLGNAEVAGIVQSIVYESFTSYLEEHPAIARRIIEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L+A +A AA++AR+LV++K L + SLPGKLADC+ P ++E++IVEGDSAGGSAKQ
Sbjct: 378 CLTAARAREAARKARELVQRKGALDTFSLPGKLADCTERDPAKAELYIVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQA+LPLRGKILNVE+ M NEEI+ LI ALG G+ G+ + + LRYH++I
Sbjct: 438 GRDRRFQAVLPLRGKILNVEKARLDRMLHNEEIRALITALGTGI-GDQYDRSKLRYHRVI 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
++TDADVDGAHIRTLLLTFF+RY + L +G +Y+ PPLY+++ GK+V Y Y D E
Sbjct: 497 LMTDADVDGAHIRTLLLTFFFRYLEGLIIDGHLYIAQPPLYRLQSGKEVHYVYSDEERDA 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + IQR+KGLGEM P QLWETT++P +R L Q+ IEDA A+ F+ LMG+
Sbjct: 557 ILNR-GDGKTWDIQRYKGLGEMNPEQLWETTMDPARRTLLQVTIEDAVRADETFNMLMGS 615
Query: 600 RVDTRKELIQNAANLV-NLD 618
V RK IQ A V NLD
Sbjct: 616 AVPPRKRFIQAHAREVRNLD 635
>gi|69246710|ref|ZP_00604078.1| DNA gyrase, B subunit [Enterococcus faecium DO]
gi|227550644|ref|ZP_03980693.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330]
gi|257878650|ref|ZP_05658303.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933]
gi|257881316|ref|ZP_05660969.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502]
gi|257888091|ref|ZP_05667744.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733]
gi|257890533|ref|ZP_05670186.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410]
gi|257893108|ref|ZP_05672761.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408]
gi|257896291|ref|ZP_05675944.1| DNA gyrase B subunit [Enterococcus faecium Com12]
gi|257899275|ref|ZP_05678928.1| DNA gyrase B subunit [Enterococcus faecium Com15]
gi|260558231|ref|ZP_05830427.1| DNA gyrase B subunit [Enterococcus faecium C68]
gi|261206921|ref|ZP_05921610.1| DNA gyrase B subunit [Enterococcus faecium TC 6]
gi|289566502|ref|ZP_06446926.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF]
gi|293379372|ref|ZP_06625516.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1]
gi|293553551|ref|ZP_06674178.1| DNA gyrase, B subunit [Enterococcus faecium E1039]
gi|293563255|ref|ZP_06677707.1| DNA gyrase, B subunit [Enterococcus faecium E1162]
gi|293569155|ref|ZP_06680461.1| DNA gyrase, B subunit [Enterococcus faecium E1071]
gi|293572722|ref|ZP_06683686.1| DNA gyrase, B subunit [Enterococcus faecium E980]
gi|294616655|ref|ZP_06696426.1| DNA gyrase, B subunit [Enterococcus faecium E1636]
gi|294619749|ref|ZP_06699154.1| DNA gyrase, B subunit [Enterococcus faecium E1679]
gi|294623763|ref|ZP_06702591.1| DNA gyrase, B subunit [Enterococcus faecium U0317]
gi|314940127|ref|ZP_07847307.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04]
gi|314943042|ref|ZP_07849846.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C]
gi|314948160|ref|ZP_07851556.1| DNA gyrase, B subunit [Enterococcus faecium TX0082]
gi|314953426|ref|ZP_07856344.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A]
gi|314993835|ref|ZP_07859171.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B]
gi|314998140|ref|ZP_07863022.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01]
gi|383327325|ref|YP_005353209.1| DNA gyrase subunit B, GyrB [Enterococcus faecium Aus0004]
gi|389867188|ref|YP_006374611.1| DNA topoisomerase subunit B [Enterococcus faecium DO]
gi|406580334|ref|ZP_11055544.1| DNA gyrase subunit B [Enterococcus sp. GMD4E]
gi|406589608|ref|ZP_11064039.1| DNA gyrase subunit B [Enterococcus sp. GMD1E]
gi|415892741|ref|ZP_11549986.1| DNA gyrase, B subunit [Enterococcus faecium E4453]
gi|416143534|ref|ZP_11599808.1| DNA gyrase, B subunit [Enterococcus faecium E4452]
gi|424764533|ref|ZP_18191957.1| DNA gyrase, B subunit [Enterococcus faecium TX1337RF]
gi|424793316|ref|ZP_18219441.1| DNA gyrase, B subunit [Enterococcus faecium V689]
gi|424806872|ref|ZP_18232295.1| DNA gyrase, B subunit [Enterococcus faecium S447]
gi|424819243|ref|ZP_18244369.1| DNA gyrase, B subunit [Enterococcus faecium R501]
gi|424857928|ref|ZP_18282007.1| DNA gyrase, B subunit [Enterococcus faecium R499]
gi|424907540|ref|ZP_18331019.1| DNA gyrase, B subunit [Enterococcus faecium R497]
gi|424951452|ref|ZP_18366546.1| DNA gyrase, B subunit [Enterococcus faecium R496]
gi|424953295|ref|ZP_18368268.1| DNA gyrase, B subunit [Enterococcus faecium R494]
gi|424957793|ref|ZP_18372500.1| DNA gyrase, B subunit [Enterococcus faecium R446]
gi|424962333|ref|ZP_18376695.1| DNA gyrase, B subunit [Enterococcus faecium P1986]
gi|424963547|ref|ZP_18377757.1| DNA gyrase, B subunit [Enterococcus faecium P1190]
gi|424967254|ref|ZP_18380961.1| DNA gyrase, B subunit [Enterococcus faecium P1140]
gi|424971814|ref|ZP_18385222.1| DNA gyrase, B subunit [Enterococcus faecium P1139]
gi|424975900|ref|ZP_18389027.1| DNA gyrase, B subunit [Enterococcus faecium P1137]
gi|424978603|ref|ZP_18391513.1| DNA gyrase, B subunit [Enterococcus faecium P1123]
gi|424981750|ref|ZP_18394460.1| DNA gyrase, B subunit [Enterococcus faecium ERV99]
gi|424984817|ref|ZP_18397334.1| DNA gyrase, B subunit [Enterococcus faecium ERV69]
gi|424988996|ref|ZP_18401285.1| DNA gyrase, B subunit [Enterococcus faecium ERV38]
gi|424990981|ref|ZP_18403164.1| DNA gyrase, B subunit [Enterococcus faecium ERV26]
gi|424996499|ref|ZP_18408302.1| DNA gyrase, B subunit [Enterococcus faecium ERV168]
gi|424999013|ref|ZP_18410666.1| DNA gyrase, B subunit [Enterococcus faecium ERV165]
gi|425002204|ref|ZP_18413652.1| DNA gyrase, B subunit [Enterococcus faecium ERV161]
gi|425005667|ref|ZP_18416888.1| DNA gyrase, B subunit [Enterococcus faecium ERV102]
gi|425008322|ref|ZP_18419408.1| DNA gyrase, B subunit [Enterococcus faecium ERV1]
gi|425012513|ref|ZP_18423323.1| DNA gyrase, B subunit [Enterococcus faecium E422]
gi|425013671|ref|ZP_18424390.1| DNA gyrase, B subunit [Enterococcus faecium E417]
gi|425016674|ref|ZP_18427223.1| DNA gyrase, B subunit [Enterococcus faecium C621]
gi|425020979|ref|ZP_18431264.1| DNA gyrase, B subunit [Enterococcus faecium C497]
gi|425024300|ref|ZP_18434373.1| DNA gyrase, B subunit [Enterococcus faecium C1904]
gi|425033613|ref|ZP_18438567.1| DNA gyrase, B subunit [Enterococcus faecium 515]
gi|425034562|ref|ZP_18439445.1| DNA gyrase, B subunit [Enterococcus faecium 514]
gi|425040395|ref|ZP_18444869.1| DNA gyrase, B subunit [Enterococcus faecium 513]
gi|425040652|ref|ZP_18445107.1| DNA gyrase, B subunit [Enterococcus faecium 511]
gi|425047072|ref|ZP_18451049.1| DNA gyrase, B subunit [Enterococcus faecium 510]
gi|425050522|ref|ZP_18454260.1| DNA gyrase, B subunit [Enterococcus faecium 509]
gi|425053384|ref|ZP_18456930.1| DNA gyrase, B subunit [Enterococcus faecium 506]
gi|425054280|ref|ZP_18457792.1| DNA gyrase, B subunit [Enterococcus faecium 505]
gi|425057355|ref|ZP_18460778.1| DNA gyrase, B subunit [Enterococcus faecium 504]
gi|425062497|ref|ZP_18465650.1| DNA gyrase, B subunit [Enterococcus faecium 503]
gi|427396885|ref|ZP_18889511.1| DNA gyrase subunit B [Enterococcus durans FB129-CNAB-4]
gi|430820786|ref|ZP_19439408.1| DNA gyrase subunit B [Enterococcus faecium E0045]
gi|430823214|ref|ZP_19441786.1| DNA gyrase subunit B [Enterococcus faecium E0120]
gi|430826501|ref|ZP_19444683.1| DNA gyrase subunit B [Enterococcus faecium E0164]
gi|430828712|ref|ZP_19446829.1| DNA gyrase subunit B [Enterococcus faecium E0269]
gi|430831766|ref|ZP_19449814.1| DNA gyrase subunit B [Enterococcus faecium E0333]
gi|430834919|ref|ZP_19452921.1| DNA gyrase subunit B [Enterococcus faecium E0679]
gi|430836323|ref|ZP_19454304.1| DNA gyrase subunit B [Enterococcus faecium E0680]
gi|430839252|ref|ZP_19457193.1| DNA gyrase subunit B [Enterococcus faecium E0688]
gi|430842549|ref|ZP_19460462.1| DNA gyrase subunit B [Enterococcus faecium E1007]
gi|430843001|ref|ZP_19460903.1| DNA gyrase subunit B [Enterococcus faecium E1050]
gi|430848164|ref|ZP_19465991.1| DNA gyrase subunit B [Enterococcus faecium E1133]
gi|430850647|ref|ZP_19468404.1| DNA gyrase subunit B [Enterococcus faecium E1185]
gi|430853333|ref|ZP_19471063.1| DNA gyrase subunit B [Enterococcus faecium E1258]
gi|430855826|ref|ZP_19473532.1| DNA gyrase subunit B [Enterococcus faecium E1392]
gi|430859054|ref|ZP_19476672.1| DNA gyrase subunit B [Enterococcus faecium E1552]
gi|430861179|ref|ZP_19478768.1| DNA gyrase subunit B [Enterococcus faecium E1573]
gi|430866247|ref|ZP_19481524.1| DNA gyrase subunit B [Enterococcus faecium E1574]
gi|430888509|ref|ZP_19484382.1| DNA gyrase subunit B [Enterococcus faecium E1575]
gi|430952221|ref|ZP_19486264.1| DNA gyrase subunit B [Enterococcus faecium E1576]
gi|430998689|ref|ZP_19488072.1| DNA gyrase subunit B [Enterococcus faecium E1578]
gi|431036317|ref|ZP_19492087.1| DNA gyrase subunit B [Enterococcus faecium E1590]
gi|431213196|ref|ZP_19501061.1| DNA gyrase subunit B [Enterococcus faecium E1620]
gi|431235057|ref|ZP_19503080.1| DNA gyrase subunit B [Enterococcus faecium E1622]
gi|431255558|ref|ZP_19504681.1| DNA gyrase subunit B [Enterococcus faecium E1623]
gi|431303596|ref|ZP_19508443.1| DNA gyrase subunit B [Enterococcus faecium E1626]
gi|431506942|ref|ZP_19515768.1| DNA gyrase subunit B [Enterococcus faecium E1634]
gi|431545128|ref|ZP_19518769.1| DNA gyrase subunit B [Enterococcus faecium E1731]
gi|431592395|ref|ZP_19521631.1| DNA gyrase subunit B [Enterococcus faecium E1861]
gi|431726687|ref|ZP_19525438.1| DNA gyrase subunit B [Enterococcus faecium E1904]
gi|431739124|ref|ZP_19528064.1| DNA gyrase subunit B [Enterococcus faecium E1972]
gi|431740593|ref|ZP_19529505.1| DNA gyrase subunit B [Enterococcus faecium E2039]
gi|431743908|ref|ZP_19532781.1| DNA gyrase subunit B [Enterococcus faecium E2071]
gi|431747293|ref|ZP_19536091.1| DNA gyrase subunit B [Enterococcus faecium E2134]
gi|431749480|ref|ZP_19538220.1| DNA gyrase subunit B [Enterococcus faecium E2297]
gi|431756019|ref|ZP_19544661.1| DNA gyrase subunit B [Enterococcus faecium E2883]
gi|431758014|ref|ZP_19546643.1| DNA gyrase subunit B [Enterococcus faecium E3083]
gi|431763280|ref|ZP_19551833.1| DNA gyrase subunit B [Enterococcus faecium E3548]
gi|431764847|ref|ZP_19553375.1| DNA gyrase subunit B [Enterococcus faecium E4215]
gi|431768128|ref|ZP_19556569.1| DNA gyrase subunit B [Enterococcus faecium E1321]
gi|431769369|ref|ZP_19557779.1| DNA gyrase subunit B [Enterococcus faecium E1644]
gi|431774627|ref|ZP_19562933.1| DNA gyrase subunit B [Enterococcus faecium E2369]
gi|431777539|ref|ZP_19565792.1| DNA gyrase subunit B [Enterococcus faecium E2560]
gi|431779780|ref|ZP_19567971.1| DNA gyrase subunit B [Enterococcus faecium E4389]
gi|431782442|ref|ZP_19570575.1| DNA gyrase subunit B [Enterococcus faecium E6012]
gi|431784263|ref|ZP_19572305.1| DNA gyrase subunit B [Enterococcus faecium E6045]
gi|447911526|ref|YP_007392938.1| DNA gyrase subunit B [Enterococcus faecium NRRL B-2354]
gi|68195124|gb|EAN09583.1| DNA gyrase, B subunit [Enterococcus faecium DO]
gi|227180223|gb|EEI61195.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330]
gi|257812878|gb|EEV41636.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933]
gi|257816974|gb|EEV44302.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502]
gi|257824145|gb|EEV51077.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733]
gi|257826893|gb|EEV53519.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410]
gi|257829487|gb|EEV56094.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408]
gi|257832856|gb|EEV59277.1| DNA gyrase B subunit [Enterococcus faecium Com12]
gi|257837187|gb|EEV62261.1| DNA gyrase B subunit [Enterococcus faecium Com15]
gi|260075405|gb|EEW63711.1| DNA gyrase B subunit [Enterococcus faecium C68]
gi|260078549|gb|EEW66251.1| DNA gyrase B subunit [Enterococcus faecium TC 6]
gi|289161711|gb|EFD09587.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF]
gi|291588124|gb|EFF19966.1| DNA gyrase, B subunit [Enterococcus faecium E1071]
gi|291590475|gb|EFF22213.1| DNA gyrase, B subunit [Enterococcus faecium E1636]
gi|291594019|gb|EFF25488.1| DNA gyrase, B subunit [Enterococcus faecium E1679]
gi|291596717|gb|EFF27940.1| DNA gyrase, B subunit [Enterococcus faecium U0317]
gi|291602306|gb|EFF32531.1| DNA gyrase, B subunit [Enterococcus faecium E1039]
gi|291604794|gb|EFF34276.1| DNA gyrase, B subunit [Enterococcus faecium E1162]
gi|291607214|gb|EFF36572.1| DNA gyrase, B subunit [Enterococcus faecium E980]
gi|292641895|gb|EFF60061.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1]
gi|313587852|gb|EFR66697.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01]
gi|313591726|gb|EFR70571.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B]
gi|313594529|gb|EFR73374.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A]
gi|313598242|gb|EFR77087.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C]
gi|313640632|gb|EFS05212.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04]
gi|313645414|gb|EFS09994.1| DNA gyrase, B subunit [Enterococcus faecium TX0082]
gi|364089253|gb|EHM31959.1| DNA gyrase, B subunit [Enterococcus faecium E4452]
gi|364093162|gb|EHM35462.1| DNA gyrase, B subunit [Enterococcus faecium E4453]
gi|378937019|gb|AFC62091.1| DNA gyrase subunit B, GyrB [Enterococcus faecium Aus0004]
gi|388532437|gb|AFK57629.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus faecium
DO]
gi|402419086|gb|EJV51368.1| DNA gyrase, B subunit [Enterococcus faecium TX1337RF]
gi|402916434|gb|EJX37312.1| DNA gyrase, B subunit [Enterococcus faecium V689]
gi|402918795|gb|EJX39457.1| DNA gyrase, B subunit [Enterococcus faecium S447]
gi|402926543|gb|EJX46578.1| DNA gyrase, B subunit [Enterococcus faecium R501]
gi|402927798|gb|EJX47727.1| DNA gyrase, B subunit [Enterococcus faecium R499]
gi|402930071|gb|EJX49768.1| DNA gyrase, B subunit [Enterococcus faecium R496]
gi|402930131|gb|EJX49822.1| DNA gyrase, B subunit [Enterococcus faecium R497]
gi|402939453|gb|EJX58361.1| DNA gyrase, B subunit [Enterococcus faecium R494]
gi|402940985|gb|EJX59747.1| DNA gyrase, B subunit [Enterococcus faecium P1986]
gi|402942732|gb|EJX61297.1| DNA gyrase, B subunit [Enterococcus faecium R446]
gi|402948841|gb|EJX66943.1| DNA gyrase, B subunit [Enterococcus faecium P1190]
gi|402952373|gb|EJX70195.1| DNA gyrase, B subunit [Enterococcus faecium P1137]
gi|402954780|gb|EJX72367.1| DNA gyrase, B subunit [Enterococcus faecium P1140]
gi|402957370|gb|EJX74762.1| DNA gyrase, B subunit [Enterococcus faecium P1139]
gi|402961186|gb|EJX78243.1| DNA gyrase, B subunit [Enterococcus faecium P1123]
gi|402962646|gb|EJX79566.1| DNA gyrase, B subunit [Enterococcus faecium ERV99]
gi|402967780|gb|EJX84306.1| DNA gyrase, B subunit [Enterococcus faecium ERV69]
gi|402970149|gb|EJX86510.1| DNA gyrase, B subunit [Enterococcus faecium ERV38]
gi|402973448|gb|EJX89575.1| DNA gyrase, B subunit [Enterococcus faecium ERV168]
gi|402978105|gb|EJX93869.1| DNA gyrase, B subunit [Enterococcus faecium ERV26]
gi|402981075|gb|EJX96629.1| DNA gyrase, B subunit [Enterococcus faecium ERV165]
gi|402983988|gb|EJX99326.1| DNA gyrase, B subunit [Enterococcus faecium ERV161]
gi|402985345|gb|EJY00562.1| DNA gyrase, B subunit [Enterococcus faecium ERV102]
gi|402992806|gb|EJY07473.1| DNA gyrase, B subunit [Enterococcus faecium ERV1]
gi|402992968|gb|EJY07621.1| DNA gyrase, B subunit [Enterococcus faecium E422]
gi|403000484|gb|EJY14601.1| DNA gyrase, B subunit [Enterococcus faecium E417]
gi|403006339|gb|EJY19990.1| DNA gyrase, B subunit [Enterococcus faecium C621]
gi|403007248|gb|EJY20838.1| DNA gyrase, B subunit [Enterococcus faecium C1904]
gi|403007980|gb|EJY21515.1| DNA gyrase, B subunit [Enterococcus faecium C497]
gi|403009200|gb|EJY22663.1| DNA gyrase, B subunit [Enterococcus faecium 515]
gi|403012980|gb|EJY26130.1| DNA gyrase, B subunit [Enterococcus faecium 513]
gi|403020060|gb|EJY32620.1| DNA gyrase, B subunit [Enterococcus faecium 514]
gi|403022573|gb|EJY34930.1| DNA gyrase, B subunit [Enterococcus faecium 510]
gi|403023309|gb|EJY35582.1| DNA gyrase, B subunit [Enterococcus faecium 509]
gi|403028096|gb|EJY39937.1| DNA gyrase, B subunit [Enterococcus faecium 511]
gi|403030615|gb|EJY42292.1| DNA gyrase, B subunit [Enterococcus faecium 506]
gi|403036327|gb|EJY47678.1| DNA gyrase, B subunit [Enterococcus faecium 505]
gi|403038090|gb|EJY49328.1| DNA gyrase, B subunit [Enterococcus faecium 503]
gi|403040679|gb|EJY51739.1| DNA gyrase, B subunit [Enterococcus faecium 504]
gi|404454195|gb|EKA01156.1| DNA gyrase subunit B [Enterococcus sp. GMD4E]
gi|404470572|gb|EKA15193.1| DNA gyrase subunit B [Enterococcus sp. GMD1E]
gi|425722632|gb|EKU85526.1| DNA gyrase subunit B [Enterococcus durans FB129-CNAB-4]
gi|430439172|gb|ELA49544.1| DNA gyrase subunit B [Enterococcus faecium E0045]
gi|430442312|gb|ELA52357.1| DNA gyrase subunit B [Enterococcus faecium E0120]
gi|430445014|gb|ELA54804.1| DNA gyrase subunit B [Enterococcus faecium E0164]
gi|430480407|gb|ELA57581.1| DNA gyrase subunit B [Enterococcus faecium E0333]
gi|430483252|gb|ELA60346.1| DNA gyrase subunit B [Enterococcus faecium E0269]
gi|430484988|gb|ELA61935.1| DNA gyrase subunit B [Enterococcus faecium E0679]
gi|430488450|gb|ELA65121.1| DNA gyrase subunit B [Enterococcus faecium E0680]
gi|430490710|gb|ELA67206.1| DNA gyrase subunit B [Enterococcus faecium E0688]
gi|430492970|gb|ELA69306.1| DNA gyrase subunit B [Enterococcus faecium E1007]
gi|430498055|gb|ELA74063.1| DNA gyrase subunit B [Enterococcus faecium E1050]
gi|430535006|gb|ELA75429.1| DNA gyrase subunit B [Enterococcus faecium E1185]
gi|430535830|gb|ELA76227.1| DNA gyrase subunit B [Enterococcus faecium E1133]
gi|430541155|gb|ELA81332.1| DNA gyrase subunit B [Enterococcus faecium E1258]
gi|430544573|gb|ELA84602.1| DNA gyrase subunit B [Enterococcus faecium E1552]
gi|430546368|gb|ELA86330.1| DNA gyrase subunit B [Enterococcus faecium E1392]
gi|430550212|gb|ELA90009.1| DNA gyrase subunit B [Enterococcus faecium E1573]
gi|430551475|gb|ELA91226.1| DNA gyrase subunit B [Enterococcus faecium E1574]
gi|430556025|gb|ELA95548.1| DNA gyrase subunit B [Enterococcus faecium E1575]
gi|430557356|gb|ELA96815.1| DNA gyrase subunit B [Enterococcus faecium E1576]
gi|430562857|gb|ELB02088.1| DNA gyrase subunit B [Enterococcus faecium E1590]
gi|430563350|gb|ELB02575.1| DNA gyrase subunit B [Enterococcus faecium E1578]
gi|430570449|gb|ELB09409.1| DNA gyrase subunit B [Enterococcus faecium E1620]
gi|430572917|gb|ELB11753.1| DNA gyrase subunit B [Enterococcus faecium E1622]
gi|430577756|gb|ELB16336.1| DNA gyrase subunit B [Enterococcus faecium E1623]
gi|430580237|gb|ELB18717.1| DNA gyrase subunit B [Enterococcus faecium E1626]
gi|430587329|gb|ELB25562.1| DNA gyrase subunit B [Enterococcus faecium E1634]
gi|430592020|gb|ELB30047.1| DNA gyrase subunit B [Enterococcus faecium E1861]
gi|430592176|gb|ELB30198.1| DNA gyrase subunit B [Enterococcus faecium E1731]
gi|430595710|gb|ELB33593.1| DNA gyrase subunit B [Enterococcus faecium E1904]
gi|430596667|gb|ELB34491.1| DNA gyrase subunit B [Enterococcus faecium E1972]
gi|430602963|gb|ELB40507.1| DNA gyrase subunit B [Enterococcus faecium E2039]
gi|430605971|gb|ELB43343.1| DNA gyrase subunit B [Enterococcus faecium E2071]
gi|430606661|gb|ELB44006.1| DNA gyrase subunit B [Enterococcus faecium E2134]
gi|430611477|gb|ELB48564.1| DNA gyrase subunit B [Enterococcus faecium E2297]
gi|430616134|gb|ELB53059.1| DNA gyrase subunit B [Enterococcus faecium E2883]
gi|430618519|gb|ELB55366.1| DNA gyrase subunit B [Enterococcus faecium E3083]
gi|430622974|gb|ELB59684.1| DNA gyrase subunit B [Enterococcus faecium E3548]
gi|430629857|gb|ELB66245.1| DNA gyrase subunit B [Enterococcus faecium E1321]
gi|430629935|gb|ELB66317.1| DNA gyrase subunit B [Enterococcus faecium E4215]
gi|430633837|gb|ELB69988.1| DNA gyrase subunit B [Enterococcus faecium E2369]
gi|430636944|gb|ELB72988.1| DNA gyrase subunit B [Enterococcus faecium E1644]
gi|430639153|gb|ELB75034.1| DNA gyrase subunit B [Enterococcus faecium E2560]
gi|430641348|gb|ELB77157.1| DNA gyrase subunit B [Enterococcus faecium E4389]
gi|430647079|gb|ELB82527.1| DNA gyrase subunit B [Enterococcus faecium E6012]
gi|430649837|gb|ELB85204.1| DNA gyrase subunit B [Enterococcus faecium E6045]
gi|445187235|gb|AGE28877.1| DNA gyrase subunit B [Enterococcus faecium NRRL B-2354]
Length = 648
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/624 (50%), Positives = 430/624 (68%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DE AG+A+ I V + DNS++V D+GRGIP+D+
Sbjct: 34 MYIGSTSSEGLHHLVWEIVDNSIDEVLAGFATKIHVIIEKDNSITVIDDGRGIPVDIQAK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGK GY VSGGLHGVG SVVNALS L+V V+++G Y+Q
Sbjct: 94 TGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGSSVVNALSTQLDVKVYKEGNVYYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L ++ DR GT + F PD ++FT +FD + +A RIRELAFLN
Sbjct: 152 EYRRGAVVDDLKI----IEQTDRHGTTVHFTPDPEIFTETTEFDFSKLATRIRELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
+ I++ ED E+ NEY + GG++ YV++LN +K + + V + I ++++
Sbjct: 208 GMRISI--EDKREEEPVINEYHYDGGIKSYVEYLNANKTVIFPEPVYLEGEQQDIAVEVS 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y ++ +AN+I T +GGTH G K +LTR +N +K K +K+ D +L+GE
Sbjct: 266 MQY-TDGYHSNIMSFANNIHTYEGGTHESGFKTALTRVINDYARKQKLMKENDDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +IS++ P+P+FEGQTKT+LGN EVR V D+ E+ ++L +P V I+ K
Sbjct: 325 VREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSEHFMKFLLENPSVGRQIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A +A LAAKRAR++ R+K L S+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQ
Sbjct: 385 GLLASRARLAAKRAREVTRRKGALEISNLPGKLADCSSNDPEKCELFIVEGDSAGGSAKQ 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G GEDF RYHK++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GEDFDVSKARYHKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PPLY V++GK + Y +
Sbjct: 504 IMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQPPLYGVKQGKNITYVQPGKNAEE 563
Query: 536 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
ELK+V +S P++ S+QR+KGLGEM QLWETT++P RM+ ++ ++DA A+ +F
Sbjct: 564 ELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMDPSNRMMARVSVDDAIAADQIFEM 623
Query: 596 LMGARVDTRKELIQNAANLV-NLD 618
LMG RV+ R+ I+ A+ V NLD
Sbjct: 624 LMGDRVEPRRAFIEENAHYVKNLD 647
>gi|110803693|ref|YP_697357.1| DNA gyrase subunit B [Clostridium perfringens SM101]
gi|110684194|gb|ABG87564.1| DNA gyrase, B subunit [Clostridium perfringens SM101]
Length = 638
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/624 (50%), Positives = 435/624 (69%), Gaps = 21/624 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY NI+V + DNS++V D+GRG+P+ +HP
Sbjct: 29 MYIGSTSSRGLHHLVYEIVDNSIDEALAGYCKNIKVYIHKDNSITVVDDGRGMPVGIHPK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++TVLHAGGKFGG S LHGVG SVVNALSE EV V RDG + Q
Sbjct: 89 MGKPTVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSELCEVIVTRDGYVWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG +T L + + GT++ F PD ++F ++D ++ R+RELAFLN
Sbjct: 147 SYKRGAVLTGLE----KIGEAEGSGTKVHFKPDHEIFEET-EYDFEILSQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITI 236
+ I L E D K + Y + GG++ +V +LN +K+ LHD V G + DGI +
Sbjct: 202 GINITLIDEREDEVKEEV--YHYEGGIKSFVSYLNRNKEVLHDEPIYVEGLK---DGIAV 256
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
+++LQ+ D +++ + +AN+I T++GGTH+ G K +LTR +N G++ +K+ D +LS
Sbjct: 257 EVSLQY-HDGFNENIFTFANNIDTVEGGTHLAGFKTALTRVMNDYGRRFGHLKESDKNLS 315
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
G+ +REGLT ++SV++ P+FEGQTKT+LGN EVR VD E ++ +LE +P+V I
Sbjct: 316 GDDIREGLTAVVSVKISEPQFEGQTKTKLGNSEVRSAVDSISGEGISTFLEENPEVGKII 375
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+L A +A AA+RAR+L R KSVL SSLPGKLADCSS P+E EI+IVEGDSAGGS
Sbjct: 376 IEKALLASRAREAARRARELTR-KSVLERSSLPGKLADCSSKDPKECEIYIVEGDSAGGS 434
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGRDR+FQAILPLRGKI+NVE++ + ++ I++++ A+G G+ G +F E +RY+
Sbjct: 435 AKQGRDRKFQAILPLRGKIMNVEKQRLDKILGSDTIRSMVTAIGAGI-GPEFDIEKIRYN 493
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
+III+TDADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYK+ +GKQ +Y Y DA
Sbjct: 494 RIIIMTDADVDGAHIRTLLLTFFYRYMRDLVEQGHVYIAQPPLYKISKGKQERYAYSDAA 553
Query: 537 LKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 595
++ F ++ ++QR+KGLGEM QLWETT++PE R+L + IEDA A+ +F+
Sbjct: 554 ADEIIEEFGGKDSSVNVQRYKGLGEMNAGQLWETTMDPESRILLRADIEDAMVADEIFTI 613
Query: 596 LMGARVDTRKELIQ-NAANLVNLD 618
LMG +V+ R+E IQ NA N+ NLD
Sbjct: 614 LMGDKVEPRREFIQKNAKNVSNLD 637
>gi|288800604|ref|ZP_06406062.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039]
gi|288332817|gb|EFC71297.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039]
Length = 657
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 301/635 (47%), Positives = 428/635 (67%), Gaps = 26/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLV E +DN++DEA AGY ++IEV + DNS++V DNGRGIP+D+H
Sbjct: 31 MYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTINEDNSITVQDNGRGIPVDMHEK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q
Sbjct: 91 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ ++ V + +GTR +FWPD +FTT + + + I+ R+RELA+LN
Sbjct: 149 EYEQGKPLYSVKV----VGETNLRGTRQQFWPDPSIFTTTL-YKWDIISRRMRELAYLNA 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L D E E F+A GL+ + ++++ + L D V+ + + + + I++
Sbjct: 204 GVRITLTDLRLDEEGKIRREEFYAQDGLKAFARYIDRHRTHLFDDVIYLKTEKNNVPIEV 263
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I
Sbjct: 264 AVMYNTD-YSENIHSYVNNINTIEGGTHLTGFRMALTRTLKAYADNDPVISKQIEKAKIE 322
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L +YLE HP
Sbjct: 323 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALADYLEEHPKEAK 382
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+ + LPGKLADCS+ P+ SEIF+VEGDSAG
Sbjct: 383 LICDKVILAATARIAARKARESVQRKNPMTGGGLPGKLADCSNKDPKTSEIFLVEGDSAG 442
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ ++++E + N+I+++G+ GV+GED K+
Sbjct: 443 GSAKQGRDRYCQAILPLRGKILNVEKVMWHKVFESESVMNIIQSIGVRFGVEGEDDKEAN 502
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + EG +Y+ PPLY + K+
Sbjct: 503 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIQEGHLYIATPPLYLCSYKNKEK 562
Query: 529 QYCYDDAEL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
+YCY + + + + S +++ +QR+KGLGEM P QLWETT+NP+ R+LKQ+ I
Sbjct: 563 EYCYTEQQRQAFIDRHTEGKDDSKSIH-VQRYKGLGEMNPEQLWETTMNPQTRLLKQVTI 621
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 622 ENAAEADEIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|409386044|ref|ZP_11238523.1| DNA gyrase subunit B [Lactococcus raffinolactis 4877]
gi|399206655|emb|CCK19438.1| DNA gyrase subunit B [Lactococcus raffinolactis 4877]
Length = 653
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/624 (48%), Positives = 422/624 (67%), Gaps = 16/624 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+IEV + DNS++V D+GRGIP+D+
Sbjct: 39 MYIGSTSSEGLHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEK 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+VTV++ G +Y+Q
Sbjct: 99 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTQLDVTVFKQGKKYYQ 156
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG + + + DR GT + F PD +FT +FD +A R+RELAFLN
Sbjct: 157 EYHRG----VVGGDLEMIGETDRHGTTVHFTPDPTIFTETTEFDFQKLAKRVRELAFLNS 212
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ D PE+ + Y + GG++ YV++LN +K L + F + +++GI +++A
Sbjct: 213 GLRISIT--DKRPEEAESLHYHYEGGIQSYVEYLNEEKTVLFEPAIFTEGEMEGIAVEVA 270
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +Y +L +AN+I T +GGTH +G + +LTR +N+ K +K +K+ + +L+G+
Sbjct: 271 MQYTG-SYHSMVLSFANNISTHEGGTHEQGFRTALTRVINNYAKSNKLLKENEENLTGDD 329
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV +V++ E +L +P V I+ K
Sbjct: 330 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVSGIVNKLFSEEFGTFLLENPQVARRIVEK 389
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS P ++EIFIVEGDSAGGSAK
Sbjct: 390 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDPTQTEIFIVEGDSAGGSAKS 449
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 450 GRNREFQAILPIRGKILNVEKASMEKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 508
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY----DDA 535
I+TDADVDGAHIRTLLLT FYRY + + + G +Y+ PP+Y V+ G ++ Y +
Sbjct: 509 IMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGVKLGDKITYIQPGVNQET 568
Query: 536 ELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 594
EL+ V N +QR+KGLGEM QLWETT++PE R + Q+ +EDAAEA+ +F
Sbjct: 569 ELQTAVLEMTTGNRKPIVQRYKGLGEMDDHQLWETTMDPEHRTMAQVSVEDAAEADQIFD 628
Query: 595 SLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R++ I+ A +D
Sbjct: 629 MLMGDRVEPRRDFIEANAQYSTID 652
>gi|295103719|emb|CBL01263.1| DNA gyrase subunit B [Faecalibacterium prausnitzii SL3/3]
Length = 664
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/633 (48%), Positives = 413/633 (65%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEI+DNA+DEA AGY +IEV +L DN + V DNGRGIP+D+
Sbjct: 39 MYIGSTGERGLHHLVYEIVDNAIDEALAGYCDHIEVKILKDNIIQVTDNGRGIPVDIQAD 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A+ V T+LHAGGKFGG +SGY V+GGLHGVG SVVNA SE L V V RDG EY Q
Sbjct: 99 TGLPAVTVVYTILHAGGKFGGENSGYKVAGGLHGVGASVVNACSEWLTVNVRRDGKEYEQ 158
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG P L C + ++ GTR+ F PD ++F +D +T+ R+RE +FLN
Sbjct: 159 TFRRGDPDGALKC--IGTVAEGVTGTRVTFKPDPEMFKDTTVYDFDTLEKRLREESFLNA 216
Query: 181 KLTIALRKE------------DSDPEKNQYNEYFFAGGLEEYVQWLNTDKK--PLH-DVV 225
+ I L E + DP + + GG++ +V +L +K LH +V+
Sbjct: 217 GVKITLTDERQLYTPVLEDGQEGDP-CYRSEVMCYEGGIKSFVTYLGEKRKLEVLHPNVI 275
Query: 226 GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 285
+ D ++ALQ+ S +Y++ +L +AN++ T DGGTH EG KASLTR N G+
Sbjct: 276 YLKGQTDRGVAEIALQYNS-SYNELLLSFANNVNTPDGGTHEEGFKASLTRVFNDYGRSH 334
Query: 286 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 345
+KDKD +LSG VREGL C+ISV++ EFEGQTK +LGN E+R +V V L E+
Sbjct: 335 GLLKDKDENLSGADVREGLICVISVKLQEAEFEGQTKAKLGNTEIRTLVSNMVYSKLMEF 394
Query: 346 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 405
E +P V +I K+ A +A AAK+AR+LVR+KS L +S +PGKLADC P +EI
Sbjct: 395 FEENPGVAKAIFEKATQAARARAAAKKARELVRRKSALETSRMPGKLADCREKDPSRTEI 454
Query: 406 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG 465
FIVEGDSAGGSAK GRD QAILPL GK+LNVE+ +Y N+++ ++ ALG G+ G
Sbjct: 455 FIVEGDSAGGSAKMGRDSAIQAILPLWGKMLNVEKARADKIYGNDKLMPVVLALGCGI-G 513
Query: 466 EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 525
++F LRY K+ I+ DADVDG+HI TL+LTFF+RY + L ++G +YV PPL+KV++G
Sbjct: 514 DEFDISKLRYDKVFIMADADVDGSHICTLMLTFFFRYMRPLIEQGHVYVAQPPLFKVQKG 573
Query: 526 KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
++Y Y+DAE+ + P + R+KGLGEM P QLWETT+NP+ R++ Q+ IED
Sbjct: 574 NTIKYAYNDAEMAILSQEMPGA---KVNRYKGLGEMNPEQLWETTMNPDNRVIVQITIED 630
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A +A+ F+ LMG +V+ R+ I+ A LD
Sbjct: 631 AEKADEAFTILMGDQVEPRRRFIETNAQYAKLD 663
>gi|50364821|ref|YP_053246.1| DNA gyrase subunit B [Mesoplasma florum L1]
gi|50363377|gb|AAT75362.1| DNA gyrase subunit B [Mesoplasma florum L1]
Length = 635
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/620 (47%), Positives = 418/620 (67%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN+VDEA AG+A+ I + + + + V DNGRGIP+ +
Sbjct: 26 MYIGSTSKAGLHHLVWEIMDNSVDEAMAGFANKIILTITKEGEIIVQDNGRGIPVGIQAD 85
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ KSALE V T LHAGGKF S Y +SGGLHGVG SVVNALS ++V V R+G +HQ
Sbjct: 86 SGKSALELVFTQLHAGGKF--DSDSYKISGGLHGVGASVVNALSLYVDVQVKREGKIHHQ 143
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+S G T + + + GT +RF PD ++F +FD+ TI ++++L++LN
Sbjct: 144 VFSGG---GTQQTEIEIIGETNETGTIVRFKPDPEIFLEGTEFDYETIRNKVKQLSYLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I L +D +++ EY F G+ +YV+ N K ++ + + D D I +++A
Sbjct: 201 GLVIEL----NDLRIDKHVEYHFPNGILDYVKEKNETKVKINPSIFYVDDKHDDIEVEVA 256
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ ++ Y + ++ + N+I T +GGTH +G++ SL R +N +K T S +
Sbjct: 257 LQYNAE-YQENLITFVNNINTHEGGTHEDGLRQSLVRVINRYAEKVATGNKPAAKYSWDD 315
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
++EG+ CI+S+R +P++EGQTKT+L NP+ +K VD V + E+L P+ +I+ K
Sbjct: 316 IKEGMVCIVSIRHTDPQYEGQTKTKLANPDAKKAVDAVVGDAFEEFLLKSPEDAKAIIDK 375
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ +A KA +AA+RAR+ R+KS L + SLPGKLADC S PE +E+++VEGDSAGGSAK
Sbjct: 376 NANAQKARIAAQRAREETRRKSALDTFSLPGKLADCESKDPEIAELYLVEGDSAGGSAKT 435
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+RRFQAILPLRGK+LNVER E + N EI++++ A+G G+K ED LRY KI+
Sbjct: 436 GRNRRFQAILPLRGKVLNVERVAEVRAFANNEIKSIVTAIGTGIK-EDIDLSKLRYGKIV 494
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +G +Y+ PPLYK+E GK+V Y Y D EL++
Sbjct: 495 IMTDADVDGAHIRTLLLTFFYRYMKQLVVDGHVYIAQPPLYKIEAGKKVAYAYSDVELEE 554
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+K+ ++ ++IQR+KGLGEM P+QLWETT++PE+R + Q+ +EDAA AN VFS LMG
Sbjct: 555 LKAGDFKDSRFTIQRYKGLGEMDPIQLWETTMDPEKRTMLQIKLEDAAIANEVFSDLMGE 614
Query: 600 RVDTRKELIQNAANLV-NLD 618
+ R+ IQ A V N+D
Sbjct: 615 DPELRRNYIQENAEFVENID 634
>gi|448473611|ref|ZP_21601753.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
gi|445819123|gb|EMA68972.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
Length = 645
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 311/616 (50%), Positives = 422/616 (68%), Gaps = 9/616 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AGY +I V + AD SV V D+GRGIP+D H
Sbjct: 27 MYIGSTDGRGLHHLVYEVVDNSIDEALAGYCDDITVTIHADGSVGVTDDGRGIPVDTHEK 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEV V RDG Y
Sbjct: 87 YDRPALEVIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVEVKRDGGVYRH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+++RG+PV V ++ + GT IRFWPD ++F T +F +T+A R+RELAFLN
Sbjct: 145 EFARGEPVEDGFERVRDMEEGESTGTYIRFWPDSEIFETT-EFAFSTLANRLRELAFLNS 203
Query: 181 --KLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITI 236
+T+A +ED+D E F + GG+ E+V +LN + P+HD V + D D I +
Sbjct: 204 GVAITLADEREDADISDAGDEETFRYDGGIREFVAYLNETRTPIHDDVIYFADEDADIHV 263
Query: 237 DLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLS 296
++A+Q ++ ++ +AN+I T +GGTH+ G K +LTRT+N + V D D +L
Sbjct: 264 EVAMQ-ATEELQGSVHAFANNINTREGGTHLTGFKTALTRTVNDYANEHGLVDDLDANLK 322
Query: 297 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 356
GE VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + E L + E +PD +
Sbjct: 323 GEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESATHEKLGTFFEENPDTARKV 382
Query: 357 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 416
+ K+ A +A AAK+A +L R+KS L S++LPGKLADC + PEE+E+F+VEGDSAGGS
Sbjct: 383 VHKAAEAARARKAAKKAEELTRRKSALESTALPGKLADCQTRDPEEAELFVVEGDSAGGS 442
Query: 417 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYH 476
AKQGR+R+ QAILPL+GKILNVE+ + +N+EI+ LI A+G G+ GE+F + RYH
Sbjct: 443 AKQGRNRKNQAILPLKGKILNVEKHRLDRILENDEIRALITAIGAGI-GEEFDIDDARYH 501
Query: 477 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 536
KII++TDADVDGAHIRTLLLT YR+ K L + G +Y PPLY+V + +AE
Sbjct: 502 KIILMTDADVDGAHIRTLLLTLLYRHMKPLLEAGYVYAAQPPLYRVRYRGETYDAMTEAE 561
Query: 537 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 596
++ +QRFKGLGEM P QLW+TT++PE R+LKQ+ I+DAA A+ +F+ L
Sbjct: 562 RDRIVEEKCDGNPDQVQRFKGLGEMNPDQLWDTTMDPENRILKQINIDDAAAADRMFNVL 621
Query: 597 MGARVDTRKELIQNAA 612
MG V+ RK+ I+ A
Sbjct: 622 MGDAVEPRKQFIKEHA 637
>gi|121889|sp|P21558.1|GYRB_HALSQ RecName: Full=DNA gyrase subunit B
gi|99223|pir||A39135 DNA topoisomerase chain B homolog - Haloferax sp
gi|149024|gb|AAB09605.1| DNA gyrase beta-subunit [Haloferax lucentense DSM 14919]
gi|1899004|gb|AAB49900.1| DNA gyrase beta-subunit [Shuttle vector pMDS20]
Length = 639
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/615 (50%), Positives = 417/615 (67%), Gaps = 11/615 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYE++DN++DEA AG+ IEVAL D SVSV DNGRGIP+ H
Sbjct: 27 MYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDAIEVALHEDGSVSVTDNGRGIPVGTHEQ 86
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
++ ALE ++TVLHAGGKF S Y VSGGLHGVG++VVNALS LEV V DG +
Sbjct: 87 YDRPALEVIMTVLHAGGKFDNKS--YQVSGGLHGVGVTVVNALSSELEVEVKHDGAVWTH 144
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ G+P V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN
Sbjct: 145 RFEVGEPQVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNS 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLA 239
+ I+L SD ++ + + F GG+ E+V++LN K LHD V+ + + +GI +++A
Sbjct: 204 GVEISL----SDERTDESSTFLFEGGIREFVEYLNETKTALHDDVIYYDDESEGIEVEIA 259
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGE 298
+Q +D ++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE
Sbjct: 260 MQ-ATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSHDMLDDLDGDNLRGE 318
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
VREGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+S
Sbjct: 319 DVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIIS 378
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K++ A +A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAK
Sbjct: 379 KAVEAARARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSESELFIVEGDSAGGSAK 438
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR+FQAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++
Sbjct: 439 QGRDRKFQAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRL 497
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
I++TDADVDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE
Sbjct: 498 ILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERD 557
Query: 539 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
++ + +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG
Sbjct: 558 RIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617
Query: 599 ARVDTRKELIQNAAN 613
V RK+ I++ AN
Sbjct: 618 DAVGPRKQFIKDHAN 632
>gi|373464810|ref|ZP_09556325.1| DNA gyrase, B subunit [Lactobacillus kisonensis F0435]
gi|371761865|gb|EHO50446.1| DNA gyrase, B subunit [Lactobacillus kisonensis F0435]
Length = 647
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/620 (49%), Positives = 418/620 (67%), Gaps = 10/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T +GLHHLV+EI+DN +DEA AG+AS I V + DNS++V D+GRGIP+D+
Sbjct: 35 MYIGTTSSQGLHHLVWEIVDNGIDEALAGFASKITVTVEKDNSITVIDDGRGIPVDIQKK 94
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T K ALETV T+LHAGGKFGG S LHGVG SVVNALS L+V V RDG Y+
Sbjct: 95 TGKPALETVFTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSSELDVEVTRDGKVYYM 152
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++RG T + V+ S D GT++ F PD +F +D + R+RELAFLN
Sbjct: 153 DFTRGHVKTKM--KVVKEVSDDLHGTKVHFLPDPDIFRETTTYDIKVLTARLRELAFLNK 210
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLA 239
L I +R D PEK ++ + GG++ YV++L+ K+ L D + + V +GIT+++A
Sbjct: 211 GLRIVIR--DLRPEKPTEKDFMYEGGIKHYVEYLDKSKETLLDEPIYVEGVMNGITVEVA 268
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D Y +T++ + N+I T +GGTH EG K +LTR +N +K+K +KD + +LSGE
Sbjct: 269 IQYTND-YHNTLMTFTNNIHTYEGGTHEEGFKRALTRVINDYARKNKLLKDNEANLSGED 327
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG T ++S++ P+P+FEGQTKT+LGN + R V D+ ++ ++L +P + I+ +
Sbjct: 328 VREGTTAVVSIKHPDPQFEGQTKTKLGNSDARTVTDRIFSDHFAKFLMENPKMARKIVDR 387
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
L A KA AAKRAR++ R+KS L S+LPGKLAD +S P SE+FIVEGDSAGGSAKQ
Sbjct: 388 GLLASKARSAAKRAREVTRKKSGLEISNLPGKLADNTSKDPRISELFIVEGDSAGGSAKQ 447
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R QAILP+RGKILNVE+ + NEEI++L A+G G GEDF + YHK+I
Sbjct: 448 GRSRLTQAILPIRGKILNVEKASMDRILANEEIRSLFTAMGTGF-GEDFDLSKINYHKLI 506
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHI+TLLLT YRY + L D G +YV PPLY+V +GK +Y D +L +
Sbjct: 507 IMTDADVDGAHIQTLLLTLIYRYMRPLIDAGYVYVAQPPLYQVRQGKMSRYIDSDEDLSQ 566
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + IQR+KGLGEM QLW+TT+NPE R L ++ DAAEAN VFS LMG
Sbjct: 567 FLGTLQPSPKPVIQRYKGLGEMDAEQLWDTTMNPENRHLLRVESSDAAEANKVFSMLMGD 626
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I++ A V NLD
Sbjct: 627 KVEPRREFIEDNATFVENLD 646
>gi|323343849|ref|ZP_08084076.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
gi|323095668|gb|EFZ38242.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
Length = 672
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 302/635 (47%), Positives = 427/635 (67%), Gaps = 26/635 (4%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG +GLHHLV E +DN++DEA AGY ++IEV + D S++V DNGRGIP+D H
Sbjct: 46 MYIGDISEKGLHHLVNETVDNSIDEAMAGYCTDIEVTINEDESITVQDNGRGIPVDEHKK 105
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+KSALE V+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q
Sbjct: 106 LHKSALEVVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQ 163
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y +GKP+ + + + D++GTR +FWPDK +FTT I + + IA R+RELA+LN
Sbjct: 164 EYEKGKPLYPVKV----MGTTDKRGTRQQFWPDKTIFTT-IHYQWDIIARRMRELAYLNA 218
Query: 181 KLTIALRKEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDL 238
+ I L ++ E E F A GL+E+V++++ + L D V+ + + GI I++
Sbjct: 219 GIKITLTDLRANEEGKPRVEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEV 278
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDIS 294
A+ + +D YS+ + Y N+I TI+GGTH+ G + +LTR L + SK ++ I
Sbjct: 279 AIMYNTD-YSENIHSYVNNINTIEGGTHLSGFRTALTRVLKAYADNDPVISKQIEKAKIE 337
Query: 295 LSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLD 354
++GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT YLE HP
Sbjct: 338 IAGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTNYLEEHPAEAK 397
Query: 355 SILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAG 414
I K + A A +AA++AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAG
Sbjct: 398 KICEKVVLAATARIAARKARESVQRKNFMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAG 457
Query: 415 GSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG--LGVKGEDFKK-- 470
GSAKQGRDR QAILPLRGKILNVE+ +++ E + N+I+++G GV+GED ++
Sbjct: 458 GSAKQGRDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREAN 517
Query: 471 -EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV 528
+ LRY KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK + K
Sbjct: 518 IDKLRYDKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIANPPLYKCSYKNKVS 577
Query: 529 QYCYDDAELKKVKSSFP-----SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI 583
+YCY + + + + + ++++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I
Sbjct: 578 EYCYTEQQRQAFFDKYANGDEDAKSIHT-QRYKGLGEMNPDQLWETTMDPKSRLLKQVNI 636
Query: 584 EDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
E+AAEA+ +FS LMG V+ R+E I+ A N+D
Sbjct: 637 ENAAEADEIFSMLMGDDVEPRREFIEQNATYANID 671
>gi|421106736|ref|ZP_15567300.1| DNA gyrase, B subunit [Leptospira kirschneri str. H2]
gi|410008202|gb|EKO61877.1| DNA gyrase, B subunit [Leptospira kirschneri str. H2]
Length = 639
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/620 (47%), Positives = 419/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYEKGIPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDRRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNIGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|260584261|ref|ZP_05852008.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633]
gi|260157779|gb|EEW92848.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633]
Length = 645
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 301/623 (48%), Positives = 416/623 (66%), Gaps = 11/623 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+A++IE+ + +N + V D+GRGIP+D+
Sbjct: 33 MYIGSTSSAGLHHLVWEIVDNSIDEALAGFATHIEIEITPENHIRVTDDGRGIPVDIQEK 92
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGK GY VSGGLHGVG SVVNALS L V V++DG Y Q
Sbjct: 93 TGRPAVETVFTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSTDLTVQVFKDGNIYEQ 150
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
Y RG + L V ++ GT + F PD ++F +D +A R+RELAFLN
Sbjct: 151 SYKRGAVLEDLKI----VGQTEKHGTSVYFVPDPEIFQETTVYDFEKLANRVRELAFLNK 206
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLA 239
L + + D E+ +++ GG++ YV+ LN K+ L + + + DGI +++A
Sbjct: 207 GLKLTIT--DLRVEEPVVKTFYYEGGIKSYVEHLNKSKQVLFEEPIYVEGEQDGIQVEVA 264
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ S Y +L + N+I T +GGTH G+K +LTR +N ++ K +K+ + LSGE
Sbjct: 265 MQYTS-GYHTNLLSFTNNIHTYEGGTHESGMKTALTRVINDYARRQKLMKENEEKLSGED 323
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT ++S++ P+P+FEGQTKT+LGN E R + D+ + ++L +P V I+ K
Sbjct: 324 VREGLTAVVSIKHPDPQFEGQTKTKLGNSEARTITDRLFATHFDKFLMENPQVARKIVEK 383
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA LAAKRAR++ R+KS L S+LPGKLADCSS P SEIFIVEGDSAGGSAKQ
Sbjct: 384 GILASKARLAAKRAREVTRKKSGLEISNLPGKLADCSSNDPSVSEIFIVEGDSAGGSAKQ 443
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R FQAILP+RGKILNVE+ + N+EI++L A+G G G DF RYHK++
Sbjct: 444 GRSRHFQAILPIRGKILNVEKASLDKILANDEIRSLFTAMGTGFGG-DFDLSKARYHKLV 502
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLL+T FYRY + + + G +Y+ PPLYK+++GKQ Y +D EL+
Sbjct: 503 IMTDADVDGAHIRTLLITLFYRYMRPVVEAGYVYIAQPPLYKLKQGKQEFYIQNDEELEA 562
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
P++ I R+KGLGEM QLWETT+NP+ R + Q+ +EDAAEA+ V LMG
Sbjct: 563 KLKELPASPKPQISRYKGLGEMDAEQLWETTMNPQNRSMLQVTVEDAAEADQVLDMLMGD 622
Query: 600 RVDTRKELIQNAANLVNLDHLDI 622
+V+ R+E I+ + ++++ LDI
Sbjct: 623 KVEPRREFIEANSKFIDVNDLDI 645
>gi|427412749|ref|ZP_18902941.1| DNA gyrase, B subunit [Veillonella ratti ACS-216-V-Col6b]
gi|425715565|gb|EKU78551.1| DNA gyrase, B subunit [Veillonella ratti ACS-216-V-Col6b]
Length = 633
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/620 (50%), Positives = 429/620 (69%), Gaps = 15/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLVYE++DN+VDEA AGY ++IEV++ DNS++V D+GRGIP +H
Sbjct: 26 MYIGSTSSKGLHHLVYEVVDNSVDEALAGYCTHIEVSINEDNSITVIDDGRGIPTGMH-E 84
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A+E VLT LHAGGKFGG S LHGVG+SVVNALSE V V +DG E
Sbjct: 85 TGVPAVELVLTKLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWTVVKVRQDGKEQEI 142
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG T L + S + GT + F PD ++F T + F+ N + R++ELAFLN
Sbjct: 143 SFERGHLRTPLKV----IGSANDTGTTVIFKPDAEIFETTV-FEFNVLCTRLQELAFLNK 197
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I L D PE++ + + GG+ +V++LN +K ++ ++ D + +D+A
Sbjct: 198 GLRITLT--DKRPEEDVVESFMYEGGIVSFVEFLNENKDLVNPTIIDVENTRDDVVVDVA 255
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ +D+YS+ +L + N+I TIDGGTH+ G +++LTRTLN G+K+ +KD + +LSG+
Sbjct: 256 FQY-NDSYSENLLSFVNNINTIDGGTHLSGFRSALTRTLNDYGRKAGLIKDNESNLSGDD 314
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+V +P+FEGQTK +LGN EV+ + D V E L +LE HP I+ K
Sbjct: 315 VREGLTAVISVKVLDPQFEGQTKAKLGNSEVKGITDTVVSEGLKTFLEEHPAEAKRIIDK 374
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ +A +A AA++AR+L R+K+ L SSLPGKLADCS P +EI++VEGDSAGGSAKQ
Sbjct: 375 ATTANRAREAARKARELTRRKNALEVSSLPGKLADCSEKDPLMTEIYLVEGDSAGGSAKQ 434
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRR+QAILPLRGKILNVE+ + N EI+++I A G G+ GEDF + RYHKII
Sbjct: 435 GRDRRYQAILPLRGKILNVEKARLDKILANNEIRSMITAFGTGI-GEDFDLDKSRYHKII 493
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++++GK Y Y DAE+
Sbjct: 494 IMTDADVDGAHIRTLLLTFFYRYMKPLIEEGRVYIAQPPLYQIKKGKGHWYVYSDAEMAA 553
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ +ED+ EA+ +FS LMG
Sbjct: 554 KLDEIGRDNI-TIQRYKGLGEMNPEQLWETTMNPENRTILQVSLEDSIEADKIFSVLMGD 612
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R++ I++ A LV NLD
Sbjct: 613 KVEPRRKFIEDNAKLVRNLD 632
>gi|398340644|ref|ZP_10525347.1| DNA gyrase subunit B [Leptospira kirschneri serovar Bim str. 1051]
gi|418686789|ref|ZP_13247954.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740513|ref|ZP_13296890.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421130021|ref|ZP_15590221.1| DNA gyrase, B subunit [Leptospira kirschneri str. 2008720114]
gi|410359396|gb|EKP06505.1| DNA gyrase, B subunit [Leptospira kirschneri str. 2008720114]
gi|410738860|gb|EKQ83593.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410751890|gb|EKR08866.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 639
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/620 (47%), Positives = 419/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNVDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNVGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|373494049|ref|ZP_09584655.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
gi|371969183|gb|EHO86634.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
Length = 641
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/621 (49%), Positives = 425/621 (68%), Gaps = 14/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYE++DN+VDEA AGY +I++ + D S++V D+GRG+P+D HP
Sbjct: 31 MYIGSTGARGLHHLVYEVVDNSVDEALAGYCKHIKIIINKDGSLTVEDDGRGMPVDNHPK 90
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
A+E + TVLHAGGKFGG S LHGVG SVVNALS + V + R+G Y Q
Sbjct: 91 LGIPAVEVIHTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTDMVVEIKRNGKIYRQ 148
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RGK VT L + G++ FWPD ++F T I+FD++T+ R RE+AFLN
Sbjct: 149 EYKRGKTVTPLEV----IGESKSTGSKTTFWPDAEIFET-IEFDYDTLQHRFREMAFLNK 203
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFR-KDVDGITIDL 238
+ I++ E P+K + + + GGL+EYV ++N +K+ LH +V+ F ++ + + +++
Sbjct: 204 GIKISITDERDTPKKKEV--FHYEGGLKEYVHYINQNKEVLHKEVIYFEVENKNSMEVEV 261
Query: 239 ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGE 298
ALQ+ +D Y++ +L YAN+I T DGGTH+ G+K++LTR +N KKSK +KD D +LSGE
Sbjct: 262 ALQY-TDRYNEFILSYANNINTTDGGTHMAGLKSALTRAINDYAKKSKILKDSDPALSGE 320
Query: 299 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 358
+REG+T I+SV++ P+FEGQTK +LGN EVR V+ + + LT YLE HP I+
Sbjct: 321 DIREGITAIVSVKLAQPQFEGQTKAKLGNSEVRGFVETATNDNLTAYLEEHPQEAKIIIE 380
Query: 359 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 418
K + A +A AA++ARD+ R+K+ L S+SLPGKLADCS P SEIF+VEGDSAGGSAK
Sbjct: 381 KCIRASRAREAARKARDITRRKNALDSTSLPGKLADCSEKDPALSEIFLVEGDSAGGSAK 440
Query: 419 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKI 478
QGRDR QA+LPLRGKILNVE+ + +EEI+N+I A G GV G DF LRYHKI
Sbjct: 441 QGRDRSRQAVLPLRGKILNVEKARLDKILNSEEIKNMITAFGCGV-GNDFDASKLRYHKI 499
Query: 479 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 538
II+TDADVDGAHIRTLLLTFF+R+ L + G +Y PPL+ ++GK V Y Y + E
Sbjct: 500 IIMTDADVDGAHIRTLLLTFFFRHMTPLIEGGYVYAAKPPLFMTKQGKDVYYTYSEPEQD 559
Query: 539 KVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 597
K+ + IQR+KGLGEM QLWETT++ R L Q+ ++DA++A+ +F+ LM
Sbjct: 560 KLLAELSGKKTKIDIQRYKGLGEMDFHQLWETTMDFNNRTLVQITMDDASQADEIFTILM 619
Query: 598 GARVDTRKELIQNAANLVNLD 618
G +V RK+ I++ A +D
Sbjct: 620 GDKVPPRKKFIEDNAKYAEID 640
>gi|297582344|ref|YP_003698124.1| DNA gyrase subunit B [Bacillus selenitireducens MLS10]
gi|297140801|gb|ADH97558.1| DNA gyrase, B subunit [Bacillus selenitireducens MLS10]
Length = 637
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 300/620 (48%), Positives = 422/620 (68%), Gaps = 13/620 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLV+EI+DN++DEA AG+ S+I V + DN+++V D+GRGIP+ +H
Sbjct: 28 MYIGSTNERGLHHLVWEIVDNSIDEAMAGHCSHIWVTIEEDNTITVEDDGRGIPVGIHEK 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
+ A+E ++TVLHAGGKFGG S LHGVG SVVNALS LEV V ++G ++
Sbjct: 88 MGRPAVEVIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSFLEVEVHKEGEVHYI 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG L + S ++ GT IRF D +FT +D + +A R+REL+FLN
Sbjct: 146 SFERGAVKEELNV----IGSTEKTGTLIRFKADNMIFTETTVYDFDVLANRLRELSFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLA 239
LTI + + E+++ +YF+ GG+ +V+ LN K LH+ F + +GI +++A
Sbjct: 202 GLTIEITDKR---EEDKSAKYFYEGGISSFVEHLNRTKTALHEPPIFIESEKEGIQVEVA 258
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ +D+++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +L G+
Sbjct: 259 MQY-NDSFASNLYSFANNINTHEGGTHESGFKTALTRVINDYARKNGLFKENDPNLIGDD 317
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT I+SV++ NP+FEGQTKT+LGN E R + D E++ +++ +P V I+ K
Sbjct: 318 VREGLTAIVSVKIENPQFEGQTKTKLGNSEARTITDSLFTEHMAKFMAENPTVARQIVEK 377
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A +A AAK+AR+L R+KS L SSLPGKLADCS+ SEI++VEGDSAGGSAKQ
Sbjct: 378 GIMASRARDAAKKARELTRRKSALEVSSLPGKLADCSTKDASISEIYVVEGDSAGGSAKQ 437
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR FQAILPLRGKI+NVE+ + N EI+ +I ALG G+ GE+F RYHKII
Sbjct: 438 GRDRHFQAILPLRGKIINVEKARLDKILANNEIRAIITALGTGI-GEEFDITKARYHKII 496
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTF YRY + L +EG IY+ PPLY++++GK V Y +++ E+++
Sbjct: 497 IMTDADVDGAHIRTLLLTFLYRYMRPLIEEGYIYIAQPPLYQIKQGKAVHYAFNEKEMER 556
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ ++ +QR+KGLGEM P QLWETT++P R L Q+ ++DA A+ VF +LMG
Sbjct: 557 ILGELSASPKPGLQRYKGLGEMNPTQLWETTMDPATRTLLQVSLKDAMLADEVFETLMGD 616
Query: 600 RVDTRKELIQNAANLV-NLD 618
RV+ R++ IQ A+ V NLD
Sbjct: 617 RVEPRRDFIQENAHYVKNLD 636
>gi|418678676|ref|ZP_13239950.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421088474|ref|ZP_15549299.1| DNA gyrase, B subunit [Leptospira kirschneri str. 200802841]
gi|400321866|gb|EJO69726.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003105|gb|EKO53554.1| DNA gyrase, B subunit [Leptospira kirschneri str. 200802841]
Length = 639
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/620 (47%), Positives = 419/620 (67%), Gaps = 11/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+ GLH +VYE++DN+VDEA AG+ + I++++L DN V V DNGRGIP+D+HP
Sbjct: 28 MYIGTQDETGLHKMVYEVVDNSVDEAMAGHCTEIKISILPDNIVEVKDNGRGIPVDIHPD 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
S +E V+T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y Q
Sbjct: 88 KKISTIEVVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQ 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
KY +G PV+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN
Sbjct: 146 KYEKGVPVSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLAL 240
L + + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++
Sbjct: 201 GLVLVVEDHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISI 260
Query: 241 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEH 299
Q+ S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE
Sbjct: 261 QY-SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGED 319
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
V+EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K
Sbjct: 320 VKEGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEK 379
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ + KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQ
Sbjct: 380 CILSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQ 439
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+
Sbjct: 440 GRDRNTQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNVDKIRYHKIM 499
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDAD+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E ++
Sbjct: 500 IMTDADIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEE 559
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
+ + + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG
Sbjct: 560 LLKNVGAEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGD 618
Query: 600 RVDTRKELIQ-NAANLVNLD 618
V RK+ I+ NAA + NLD
Sbjct: 619 EVQPRKQFIEVNAAKVANLD 638
>gi|406838853|ref|ZP_11098447.1| DNA gyrase subunit B [Lactobacillus vini DSM 20605]
Length = 650
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 416/620 (67%), Gaps = 10/620 (1%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST +GLHHLV+EI+DN +DEA AG+A I V + +DNS++V DNGRGIP+D+ P
Sbjct: 38 MYIGSTSSQGLHHLVWEIIDNGIDEALAGFADEINVIVESDNSITVKDNGRGIPVDIQPK 97
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + ALETV T+LHAGGK GY VSGGLHGVG SVVNALS L+V V R+ Y
Sbjct: 98 TGRPALETVFTILHAGGK--FGGGGYKVSGGLHGVGASVVNALSTELDVKVKRNSKIYAM 155
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK ++ + GT + F PD +FT +D N + RIRELAFLN
Sbjct: 156 DFKRGK--VNHEMQIIGDCGEHEHGTIVHFLPDPDIFTETTTYDINILTTRIRELAFLNK 213
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLA 239
L I ++ D EK ++ + GG+ YV++LN +K+ L + V + +GIT++++
Sbjct: 214 GLRITIK--DLRSEKPTLQQFHYEGGIRHYVEFLNKNKEALFPEPVYVEGEQNGITVEVS 271
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
LQ+ +D +S+ +L +AN+I T +GGTH G K +LTR +N KK+K +KD D +LSGE
Sbjct: 272 LQYTNDFHSN-LLTFANNIHTYEGGTHEAGFKTALTRVINDYAKKNKLLKDSDDNLSGED 330
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREG+T ++S++ P+P+FEGQTKT+LGN + R V D E+ ++++ +P V I+ K
Sbjct: 331 VREGMTAVVSIKHPDPQFEGQTKTKLGNSDARTVTDHLFSEHFSKFMLENPAVARKIVDK 390
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+K+ L S+LPGKLAD +S P SE+FIVEGDSAGGSAKQ
Sbjct: 391 GILASKARVAAKRAREVTRKKNGLEISNLPGKLADNTSKDPSISELFIVEGDSAGGSAKQ 450
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR R QAILP+RGKILNVE+ + NEEI++L ALG G GEDF + YHK+I
Sbjct: 451 GRSRLTQAILPIRGKILNVEKATLDRILANEEIRSLFTALGTGF-GEDFDIDKANYHKLI 509
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLT FYR+ + + D G +Y+ PPLY+V +GK ++Y D EL +
Sbjct: 510 IMTDADVDGAHIRTLLLTLFYRFMRPMIDHGYVYIAQPPLYQVRQGKMIKYIDTDEELDE 569
Query: 540 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 599
V IQR+KGLGEM QLWETT++PE R L Q+ + DA EAN VF LMG
Sbjct: 570 VVGQLSPAPKPVIQRYKGLGEMDAEQLWETTMDPENRRLLQVELSDAEEANEVFEMLMGD 629
Query: 600 RVDTRKELIQNAANLV-NLD 618
+V+ R+E I+ A V NLD
Sbjct: 630 KVEPRREFIEKNATFVENLD 649
>gi|303233456|ref|ZP_07320124.1| DNA gyrase, B subunit [Atopobium vaginae PB189-T1-4]
gi|302480464|gb|EFL43556.1| DNA gyrase, B subunit [Atopobium vaginae PB189-T1-4]
Length = 648
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/634 (47%), Positives = 421/634 (66%), Gaps = 25/634 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIG+T GLHHLV+EI+DN+VDEA AG+ ++IEV + DNS+SV DNGRGIP+++HP
Sbjct: 28 MYIGTTSAAGLHHLVWEIVDNSVDEAMAGFCTSIEVTVHPDNSISVKDNGRGIPVEIHPQ 87
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
LE VLT+LHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L TV RDG +
Sbjct: 88 KKIPTLEVVLTILHAGGKF--DNAAYKVSGGLHGVGVSVVNALSKRLIATVERDGGIFQM 145
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
++ RGK +T + + + + GT I FWPD +F T + ++ T+ R++E AFLN
Sbjct: 146 EFERGK----VTKKMQQIGTSSKTGTTITFWPDDLIFETTV-YNFETLQNRLQETAFLNK 200
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV------GFRKDVDGI 234
L I R D E + EY ++GG+ ++V++LN +K PL + G + +
Sbjct: 201 NLHI--RITDEREETPRVEEYCYSGGIIDFVKFLNEEKTPLPGLTTPIYIEGQSDESAPL 258
Query: 235 T----IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKD 290
T +++A+QW + +YS+ ++ +AN I T +GG H+EG + +LT+T+N + +K+
Sbjct: 259 TQKGEVEVAIQWNT-SYSEYVMSFANDIYTDEGGMHLEGFRTALTKTVNDYARGHNLLKE 317
Query: 291 KDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHP 350
KD +L+G+ +REGL +ISV++P+P+FEGQTK +LG+ +R + ++ V LTEY E HP
Sbjct: 318 KDSNLTGDDIREGLCAVISVKLPDPQFEGQTKAKLGSSYMRSLTNKIVAAGLTEYFEEHP 377
Query: 351 DVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEG 410
+ I K+ A K LAA++AR + R+K +L S+SLPGKLADCS E +E+FIVEG
Sbjct: 378 NQAKEIFKKAAQAAKGRLAAQKARQVARRKGLLESASLPGKLADCSVRDAEMTELFIVEG 437
Query: 411 DSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK 470
DSAGGSAK RDR QA+LPLRGKILNVER + +E I +LI A+G GV G +F
Sbjct: 438 DSAGGSAKMARDRSIQAVLPLRGKILNVERVQQDRALSSETITSLITAIGTGV-GNEFNI 496
Query: 471 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV--ERGKQV 528
E RYHKI+I+TDADVDGAHIR LLLTFFYRY K L D G IYV PPLY++ + K
Sbjct: 497 EKARYHKIVIMTDADVDGAHIRILLLTFFYRYMKPLVDAGFIYVAQPPLYQIKAKGKKYG 556
Query: 529 QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 588
+Y Y D EL + + Y++QR+KGLGEM P QLW TT+ P+ R++ ++ IEDA +
Sbjct: 557 KYLYTDEELAIEAREYDDPSKYTVQRYKGLGEMDPEQLWSTTMEPKNRIMLRVTIEDARD 616
Query: 589 ANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 622
A ++LMG++V+ RK+ IQ A V LDI
Sbjct: 617 AERAVANLMGSQVEKRKDFIQTHAKDVRF--LDI 648
>gi|422846387|ref|ZP_16893070.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK72]
gi|325687830|gb|EGD29850.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus
sanguinis SK72]
Length = 649
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 302/625 (48%), Positives = 426/625 (68%), Gaps = 17/625 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST GLHHLV+EI+DN++DEA AG+AS+I+V + DNS++V DNGRGIP+D+
Sbjct: 34 MYIGSTSKEGLHHLVWEIVDNSIDEALAGFASHIQVFIEKDNSITVVDNGRGIPVDIQEK 93
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T + A+ETV TVLHAGGKFGG S LHGVG SVVNALS L+V V+++G ++Q
Sbjct: 94 TGRPAVETVFTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSTQLDVRVYKNGQIHYQ 151
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+Y RG V L + DR GT + F PD ++FT ++FD + R++ELAFLN
Sbjct: 152 EYRRGHVVADLEI----IGETDRTGTTVHFTPDPEIFTETVEFDFEKLNKRVQELAFLNR 207
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLA 239
L I++ + E Q +Y + GG+ YVQ++N +K + + + ++D IT+++A
Sbjct: 208 GLRISITDKRDGME--QSKDYHYEGGIASYVQYINENKDVIFETPIYTDGEMDDITVEVA 265
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
+Q+ + Y +T++ +AN+I T +GGTH +G + +LTR +N KK+K +K+ + +L+GE
Sbjct: 266 MQYTT-GYHETVMSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKLLKENEDNLTGED 324
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
VREGLT +ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +++L +P V I+ K
Sbjct: 325 VREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFSDFLLENPAVARKIVEK 384
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
+ A KA +AAKRAR++ R+KS L S+LPGKLADCSS P+E+E+FIVEGDSAGGSAK
Sbjct: 385 GILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDPQETELFIVEGDSAGGSAKS 444
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GR+R FQAILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++
Sbjct: 445 GRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLV 503
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY-----CYDD 534
I+TDADVDGAHIRTLLLT YRY K + + G +Y+ PP+Y V+ G +V+ +
Sbjct: 504 IMTDADVDGAHIRTLLLTLIYRYMKPVLEAGFVYIAQPPIYGVKVGSEVKEYIQPGANQE 563
Query: 535 AELKKVKSSFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 593
EL+ + + + +IQR+KGLGEM QLWETT+NPE R++ ++ ++DAAEA+ +F
Sbjct: 564 EELQTALARYSEGRSKPTIQRYKGLGEMDDHQLWETTMNPEHRLMARVSVDDAAEADKIF 623
Query: 594 SSLMGARVDTRKELIQNAANLVNLD 618
LMG RV+ R+E I+ A LD
Sbjct: 624 DMLMGDRVEPRREFIEENAVYSTLD 648
>gi|160944260|ref|ZP_02091489.1| hypothetical protein FAEPRAM212_01769 [Faecalibacterium prausnitzii
M21/2]
gi|158444442|gb|EDP21446.1| DNA gyrase, B subunit [Faecalibacterium prausnitzii M21/2]
Length = 664
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/633 (48%), Positives = 413/633 (65%), Gaps = 23/633 (3%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGSTG RGLHHLVYEI+DNA+DEA AGY +IEV +L DN + V DNGRGIP+D+
Sbjct: 39 MYIGSTGERGLHHLVYEIVDNAIDEALAGYCDHIEVKILKDNIIQVTDNGRGIPVDIQAD 98
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
T A+ V T+LHAGGKFGG +SGY V+GGLHGVG SVVNA SE L V V RDG EY Q
Sbjct: 99 TGLPAVTVVYTILHAGGKFGGENSGYKVAGGLHGVGASVVNACSEWLTVNVRRDGKEYEQ 158
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RG P L C + ++ GTR+ F PD ++F +D +T+ R+RE +FLN
Sbjct: 159 TFRRGDPDGDLKC--IGTVAEGVTGTRVTFKPDPEMFKDTTVYDFDTLEKRLREESFLNA 216
Query: 181 KLTIALRKE------------DSDPEKNQYNEYFFAGGLEEYVQWLNTDKK--PLH-DVV 225
+ I L E + DP + + GG++ +V +L +K LH +V+
Sbjct: 217 GVKITLTDERQLYTPVLEDGQEGDP-CYRSEVMCYEGGIKSFVTYLGEKRKLEVLHPNVI 275
Query: 226 GFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 285
+ D ++ALQ+ S +Y++ +L +AN++ T DGGTH EG KASLTR N G+
Sbjct: 276 YLKGQTDRGVAEIALQYNS-SYNELLLSFANNVNTPDGGTHEEGFKASLTRVFNDYGRSH 334
Query: 286 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 345
+KDKD +LSG VREGL C+ISV++ EFEGQTK +LGN E+R +V V L E+
Sbjct: 335 GLLKDKDENLSGADVREGLICVISVKLQEAEFEGQTKAKLGNTEIRTLVSNMVYSKLMEF 394
Query: 346 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 405
E +P V +I K+ A +A AAK+AR+LVR+KS L +S +PGKLADC P +EI
Sbjct: 395 FEENPGVAKAIFEKATQAARARAAAKKARELVRRKSALETSRMPGKLADCREKDPSRTEI 454
Query: 406 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG 465
FIVEGDSAGGSAK GRD QAILPL GK+LNVE+ +Y N+++ ++ ALG G+ G
Sbjct: 455 FIVEGDSAGGSAKMGRDSAIQAILPLWGKMLNVEKARADKIYGNDKLMPVVLALGCGI-G 513
Query: 466 EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 525
++F LRY K+ I+ DADVDG+HI TL+LTFF+RY + L ++G +YV PPL+KV++G
Sbjct: 514 DEFDISKLRYDKVFIMADADVDGSHICTLMLTFFFRYMRPLIEQGHVYVAQPPLFKVQKG 573
Query: 526 KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 585
++Y Y+DAE+ + P + R+KGLGEM P QLWETT+NP+ R++ Q+ IED
Sbjct: 574 NTIKYAYNDAEMAILSQEMPGA---KVNRYKGLGEMNPEQLWETTMNPDNRVIVQITIED 630
Query: 586 AAEANVVFSSLMGARVDTRKELIQNAANLVNLD 618
A +A+ F+ LMG +V+ R+ I+ A LD
Sbjct: 631 AEKADEAFTILMGDQVEPRRRFIETNAQYAKLD 663
>gi|153952676|ref|YP_001393441.1| DNA gyrase subunit B [Clostridium kluyveri DSM 555]
gi|219853349|ref|YP_002470471.1| DNA gyrase B subunit [Clostridium kluyveri NBRC 12016]
gi|146345557|gb|EDK32093.1| GyrB1 [Clostridium kluyveri DSM 555]
gi|219567073|dbj|BAH05057.1| DNA gyrase B subunit [Clostridium kluyveri NBRC 12016]
Length = 637
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 436/621 (70%), Gaps = 16/621 (2%)
Query: 1 MYIGSTGPRGLHHLVYEILDNAVDEAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPA 60
MYIGST RGLHHLVYEI+DN++DEA AGY I+V + DNSV+VADNGRG+P+ +H
Sbjct: 29 MYIGSTSLRGLHHLVYEIVDNSIDEALAGYCDKIDVVIHEDNSVTVADNGRGMPVGIHHK 88
Query: 61 TNKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQ 120
K +E ++T+LHAGGK GY VSGGLHGVG SVVNALSE EV V R+ + Q
Sbjct: 89 IKKPTVEVIMTILHAGGK--FGGGGYKVSGGLHGVGASVVNALSEICEVEVKREKHVWKQ 146
Query: 121 KYSRGKPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP 180
+ RGK T L + + GT+I F PDK++F + FD++ ++ R+RELAFLN
Sbjct: 147 VFKRGKVATGLEI----IGDSEEHGTKIYFKPDKEIFD-EVDFDYDMLSQRLRELAFLNK 201
Query: 181 KLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLA 239
+ I L+ E S E+ + + GG++ +V +LN +K+ +H + + + G ++++A
Sbjct: 202 GIAITLKDERSGKEE----LFHYEGGIKSFVTYLNRNKQTIHKEPIYVEGIKGDYSVEIA 257
Query: 240 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 299
Q+ ++ YS+ + +AN+I TI+GGTH+ G K++LTR N KK +K+ D +LSGE
Sbjct: 258 FQY-NNGYSENIFSFANNIDTIEGGTHLAGFKSALTRVFNDYAKKFNILKENDKNLSGED 316
Query: 300 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 359
+REG+T +IS+++ +P+FEGQTKT+LGN EVR +VD + E L+++L+ +P V +I+ K
Sbjct: 317 IREGITAVISIKLVDPQFEGQTKTKLGNSEVRGIVDNIMAESLSDFLQENPQVAKTIIDK 376
Query: 360 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 419
SL A +A AA++AR+L R+K+VL ++SLPGKLADCSS P E EI++VEGDSAGGSAKQ
Sbjct: 377 SLVASRAREAARKARELTRRKTVLENTSLPGKLADCSSKDPSECEIYLVEGDSAGGSAKQ 436
Query: 420 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 479
GRDRRFQAILPLRGKI+NVE++ + EEI+ +I A G G+ G+DF +RY+KII
Sbjct: 437 GRDRRFQAILPLRGKIMNVEKQRLDKILGYEEIRAMITAFGAGI-GKDFDISKIRYNKII 495
Query: 480 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 539
I+TDADVDGAHIRTLLLTFFYRY + L ++ +Y+ PPLYKV + K+ Y Y D EL
Sbjct: 496 IMTDADVDGAHIRTLLLTFFYRYMRELVEKCHVYIAQPPLYKVAKNKKDYYAYSDKELDI 555
Query: 540 VKSSF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 598
+ + N+ +IQR+KGLGEM QLW+TT+NPE R L Q+ +ED A+ +F+ LMG
Sbjct: 556 LLNEIGGKNSNVNIQRYKGLGEMDSEQLWDTTMNPETRTLIQVNVEDTIAADEIFTILMG 615
Query: 599 ARVDTRKE-LIQNAANLVNLD 618
+V+ RK+ +I+NA +VNLD
Sbjct: 616 DKVEPRKDFIIENAKKVVNLD 636
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,562,829,076
Number of Sequences: 23463169
Number of extensions: 406716725
Number of successful extensions: 1244119
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17819
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 1137476
Number of HSP's gapped (non-prelim): 22151
length of query: 622
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 473
effective length of database: 8,863,183,186
effective search space: 4192285646978
effective search space used: 4192285646978
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)