Query 007007
Match_columns 621
No_of_seqs 194 out of 399
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 14:44:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007007.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007007hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pa7a1 b.82.1.1 (A:2-136) dTD 20.7 15 0.0011 30.5 1.3 17 553-569 44-60 (135)
2 d1nlna_ d.3.1.7 (A:) Human ade 8.3 36 0.0026 31.2 -0.0 28 583-618 65-93 (203)
3 d1gt1a_ b.60.1.1 (A:) Odorant- 7.8 73 0.0053 25.5 1.7 22 247-268 117-138 (158)
4 d1a7ge_ d.58.8.1 (E:) Papillom 7.3 71 0.0052 25.3 1.3 17 248-264 47-66 (82)
5 d1r8ha_ d.58.8.1 (A:) Papillom 7.1 71 0.0052 25.6 1.2 17 248-264 49-68 (87)
6 d2bopa_ d.58.8.1 (A:) Papillom 6.9 74 0.0054 25.3 1.2 11 254-264 57-67 (85)
7 d2beia1 d.108.1.1 (A:3-169) Di 6.8 36 0.0026 26.5 -0.7 32 515-547 135-166 (167)
8 d1e5pa_ b.60.1.1 (A:) Aphrodis 6.8 79 0.0058 25.2 1.4 24 245-268 107-131 (149)
9 d2omoa1 d.58.4.11 (A:1-98) Hyp 6.6 1.1E+02 0.0083 22.7 2.2 20 249-268 6-25 (98)
10 d2ohwa1 d.79.8.1 (A:3-130) Unc 6.5 48 0.0035 28.1 -0.2 16 247-262 12-27 (128)
No 1
>d2pa7a1 b.82.1.1 (A:2-136) dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA {Aneurinibacillus thermoaerophilus [TaxId: 143495]}
Probab=20.66 E-value=15 Score=30.46 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=14.8
Q ss_pred hccceeecccceeeecc
Q 007007 553 KQSWRYHRKYNTWFQRH 569 (621)
Q Consensus 553 kRgWRYHKe~k~WF~R~ 569 (621)
-|||.||++..+||.-.
T Consensus 44 iRG~H~Hk~~~q~~~vi 60 (135)
T d2pa7a1 44 PRGFHAHKKLEQVLVCL 60 (135)
T ss_dssp CEEEEEESSCCEEEEEE
T ss_pred EEeeeccccccEEEEec
Confidence 49999999999998764
No 2
>d1nlna_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain {Mastadenovirus H2 [TaxId: 10515]}
Probab=8.34 E-value=36 Score=31.24 Aligned_cols=28 Identities=36% Similarity=0.623 Sum_probs=22.3
Q ss_pred eEEEeccccCccccccccc-ceeccCeeeechhhhhh
Q 007007 583 TYVYFDFHIANDDLQHGWC-QRIKTEFTFEYNYLEDE 618 (621)
Q Consensus 583 sY~YFD~~~~~~~~~~~W~-qR~K~nFtfeY~~LE~r 618 (621)
++++|||. +|. ++.|.-+.|+|+-|-+|
T Consensus 65 t~Y~FDPf--------Gfsd~~L~q~Y~FeY~~llkR 93 (203)
T d1nlna_ 65 TCYLFEPF--------GFSDQRLKQVYQFEYESLLRR 93 (203)
T ss_dssp EEEEECTT--------CCCHHHHHHHHCCCCHHHHHH
T ss_pred eEEEECCC--------CCCHHHHHHHhhhhHHHHHHH
Confidence 78999998 774 34678899999887665
No 3
>d1gt1a_ b.60.1.1 (A:) Odorant-binding protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.84 E-value=73 Score=25.54 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=18.2
Q ss_pred cccccccCchhHHHHHHHHHHH
Q 007007 247 FRGRTEIAPDQREKFLQRLQQV 268 (621)
Q Consensus 247 ~r~r~ei~~dqrek~lqr~qqv 268 (621)
+-+|+++.++.+|||.+..+-.
T Consensus 117 L~r~~~~~~e~~e~F~~~~~~~ 138 (158)
T d1gt1a_ 117 LFVKLNVEDEDLEKFWKLTEDK 138 (158)
T ss_dssp EEEECCCCHHHHHHHHHHHHHT
T ss_pred EecCCCcCHHHHHHHHHHHHHc
Confidence 6678999999999999776543
No 4
>d1a7ge_ d.58.8.1 (E:) Papillomavirus-1 E2 protein {Human papillomavirus type 31 [TaxId: 10585]}
Probab=7.26 E-value=71 Score=25.28 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=12.4
Q ss_pred cccccc---CchhHHHHHHH
Q 007007 248 RGRTEI---APDQREKFLQR 264 (621)
Q Consensus 248 r~r~ei---~~dqrek~lqr 264 (621)
++|--| +.+|||+||..
T Consensus 47 ~ar~lv~F~s~~QR~~FL~~ 66 (82)
T d1a7ge_ 47 NAIVTLTYISTSQRDDFLNT 66 (82)
T ss_dssp TEEEEEECSCHHHHHHHHHH
T ss_pred ceEEEEEECCHHHHHHHHhc
Confidence 455433 68999999975
No 5
>d1r8ha_ d.58.8.1 (A:) Papillomavirus-1 E2 protein {Human papillomavirus type 6a [TaxId: 37122]}
Probab=7.14 E-value=71 Score=25.57 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=12.5
Q ss_pred cccccc---CchhHHHHHHH
Q 007007 248 RGRTEI---APDQREKFLQR 264 (621)
Q Consensus 248 r~r~ei---~~dqrek~lqr 264 (621)
++|--| +..|||+||..
T Consensus 49 ~ar~lv~F~s~~QR~~FL~~ 68 (87)
T d1r8ha_ 49 HAIVTVTYHSEEQRQQFLNV 68 (87)
T ss_dssp CEEEEEECSSHHHHHHHHHH
T ss_pred ceEEEEEECCHHHHHHHHhc
Confidence 566444 57899999975
No 6
>d2bopa_ d.58.8.1 (A:) Papillomavirus-1 E2 protein {Bovine papillomavirus type 1 [TaxId: 10559]}
Probab=6.90 E-value=74 Score=25.32 Aligned_cols=11 Identities=45% Similarity=0.966 Sum_probs=9.5
Q ss_pred CchhHHHHHHH
Q 007007 254 APDQREKFLQR 264 (621)
Q Consensus 254 ~~dqrek~lqr 264 (621)
+..|||+||+.
T Consensus 57 s~~QR~~FL~~ 67 (85)
T d2bopa_ 57 SPSQRQDFLKH 67 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHhc
Confidence 68999999975
No 7
>d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.82 E-value=36 Score=26.50 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=25.5
Q ss_pred hhHHhhhccCCCCCceeEEEeecCCCcHHHHHH
Q 007007 515 PAFWERLSLDSYGTDTLFFAFYYQQNTYQQYLA 547 (621)
Q Consensus 515 p~~fqKiKm~kfs~ETLFYIFYy~PgD~~QllA 547 (621)
..||+|+|+....+ +-.|.||.+.++.+|.+|
T Consensus 135 ~~~Y~k~GF~~~~~-~~~y~~~~~~~~~~~~~~ 166 (167)
T d2beia1 135 MDLYKALGAQDLTE-AEGWHFFCFQGEATRKLA 166 (167)
T ss_dssp HHHHHHTTCEEHHH-HHCEEEEEEETHHHHHHT
T ss_pred HHHHHHCCCEEccE-ecCcEEEEeCHHHHHHhc
Confidence 47899988877764 446889999999998876
No 8
>d1e5pa_ b.60.1.1 (A:) Aphrodisin, a sex pheromone {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=6.78 E-value=79 Score=25.20 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=19.4
Q ss_pred CCcccc-cccCchhHHHHHHHHHHH
Q 007007 245 GQFRGR-TEIAPDQREKFLQRLQQV 268 (621)
Q Consensus 245 gq~r~r-~ei~~dqrek~lqr~qqv 268 (621)
.++-|| ++++|+++|+|.+-.+.+
T Consensus 107 ~~L~~R~~~~s~e~~e~F~~~~~~~ 131 (149)
T d1e5pa_ 107 IVVAGKGNALTPEENEILVQFAHEK 131 (149)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 467778 889999999998876654
No 9
>d2omoa1 d.58.4.11 (A:1-98) Hypothetical protein NE0621 {Nitrosomonas europaea [TaxId: 915]}
Probab=6.56 E-value=1.1e+02 Score=22.68 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=14.1
Q ss_pred cccccCchhHHHHHHHHHHH
Q 007007 249 GRTEIAPDQREKFLQRLQQV 268 (621)
Q Consensus 249 ~r~ei~~dqrek~lqr~qqv 268 (621)
+|-+|.|+.++.|++.++++
T Consensus 6 ~~~~vkp~~~~~f~~~~~~~ 25 (98)
T d2omoa1 6 VYASVKTDKTEAFKEATRMN 25 (98)
T ss_dssp EEEEBCGGGHHHHHHHHHHH
T ss_pred EEEEECcCcHHHHHHHHHHH
Confidence 35567777777777777766
No 10
>d2ohwa1 d.79.8.1 (A:3-130) Uncharacterized protein YueI {Bacillus subtilis [TaxId: 1423]}
Probab=6.45 E-value=48 Score=28.12 Aligned_cols=16 Identities=44% Similarity=0.725 Sum_probs=0.0
Q ss_pred cccccccCchhHHHHH
Q 007007 247 FRGRTEIAPDQREKFL 262 (621)
Q Consensus 247 ~r~r~ei~~dqrek~l 262 (621)
.+|-+++-||+|.|||
T Consensus 12 ~~G~p~~kPDEqr~yL 27 (128)
T d2ohwa1 12 MYGPLETKPDERHLFL 27 (128)
T ss_dssp CCSCCSSHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHhc
Done!