Query 007010
Match_columns 621
No_of_seqs 217 out of 1667
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 14:49:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l0q_A Xylulose kinase; xlylul 100.0 4.8E-97 2E-101 831.0 49.8 539 54-618 4-545 (554)
2 3ll3_A Gluconate kinase; xylul 100.0 1.6E-94 5.6E-99 801.2 44.7 486 52-614 1-490 (504)
3 3ifr_A Carbohydrate kinase, FG 100.0 4.5E-94 1.5E-98 798.4 43.1 489 54-616 6-499 (508)
4 3hz6_A Xylulokinase; xylulose, 100.0 8.7E-94 3E-98 796.7 42.1 486 54-613 4-503 (511)
5 3jvp_A Ribulokinase; PSI-II, N 100.0 1.7E-91 5.8E-96 788.4 47.3 504 54-610 4-539 (572)
6 4e1j_A Glycerol kinase; struct 100.0 9.7E-89 3.3E-93 757.2 44.5 479 51-610 22-517 (520)
7 3h3n_X Glycerol kinase; ATP-bi 100.0 3.9E-88 1.3E-92 750.8 43.7 479 54-612 4-497 (506)
8 2itm_A Xylulose kinase, xylulo 100.0 2.5E-88 8.4E-93 749.4 41.7 478 56-612 1-482 (484)
9 3g25_A Glycerol kinase; IDP007 100.0 7.4E-88 2.5E-92 748.0 43.3 479 54-612 5-498 (501)
10 2p3r_A Glycerol kinase; glycer 100.0 2.5E-88 8.5E-93 752.7 38.2 480 54-612 2-495 (510)
11 2zf5_O Glycerol kinase; hypert 100.0 1.8E-87 6.1E-92 744.5 38.1 484 54-620 2-495 (497)
12 3ezw_A Glycerol kinase; glycer 100.0 8E-88 2.8E-92 751.7 34.7 478 54-610 3-494 (526)
13 4bc3_A Xylulose kinase; transf 100.0 1.4E-86 4.8E-91 743.2 39.6 478 54-612 9-532 (538)
14 2w40_A Glycerol kinase, putati 100.0 3.6E-86 1.2E-90 735.1 42.3 476 54-611 3-501 (503)
15 2d4w_A Glycerol kinase; alpha 100.0 9.4E-86 3.2E-90 731.7 42.7 478 55-614 2-499 (504)
16 2dpn_A Glycerol kinase; thermu 100.0 3.7E-85 1.3E-89 725.6 43.1 474 55-612 2-491 (495)
17 3i8b_A Xylulose kinase; strain 100.0 3E-83 1E-87 711.4 36.2 456 54-599 4-506 (515)
18 3h6e_A Carbohydrate kinase, FG 100.0 2.8E-76 9.6E-81 649.0 34.0 452 54-607 5-469 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 5.4E-75 1.9E-79 643.8 25.0 463 52-607 1-486 (489)
20 1hux_A Activator of (R)-2-hydr 99.6 1.2E-15 4.2E-20 155.1 13.8 129 393-562 127-257 (270)
21 3h1q_A Ethanolamine utilizatio 98.6 6.3E-06 2.2E-10 82.9 22.0 72 483-558 199-271 (272)
22 2qm1_A Glucokinase; alpha-beta 98.3 1.6E-06 5.4E-11 89.8 9.7 91 55-163 6-97 (326)
23 2ch5_A NAGK protein; transfera 98.2 3.1E-06 1.1E-10 88.4 9.8 74 51-129 2-76 (347)
24 1zc6_A Probable N-acetylglucos 98.2 4.5E-06 1.5E-10 85.7 10.6 73 51-129 5-81 (305)
25 3vgl_A Glucokinase; ROK family 98.1 4.9E-06 1.7E-10 86.1 8.6 89 54-167 1-90 (321)
26 1z05_A Transcriptional regulat 98.1 1.1E-05 3.6E-10 87.1 11.0 91 55-164 108-199 (429)
27 1z6r_A MLC protein; transcript 98.0 8.6E-06 2.9E-10 87.1 8.8 80 55-145 85-165 (406)
28 2hoe_A N-acetylglucosamine kin 98.0 8.6E-06 3E-10 86.4 8.5 91 55-163 87-178 (380)
29 2yhw_A Bifunctional UDP-N-acet 98.0 1.7E-05 5.8E-10 82.8 9.9 79 55-145 30-109 (343)
30 2e2o_A Hexokinase; acetate and 97.9 8.9E-06 3.1E-10 83.1 6.1 98 56-170 3-103 (299)
31 3r8e_A Hypothetical sugar kina 97.9 2E-05 6.7E-10 81.6 7.8 91 54-166 18-110 (321)
32 4db3_A Glcnac kinase, N-acetyl 97.8 7.7E-05 2.6E-09 77.3 11.6 75 56-145 25-100 (327)
33 3htv_A D-allose kinase, alloki 97.7 2.4E-05 8.2E-10 80.6 4.6 86 55-162 7-93 (310)
34 3epq_A Putative fructokinase; 97.4 0.00017 5.8E-09 73.9 6.8 57 55-130 3-59 (302)
35 4htl_A Beta-glucoside kinase; 97.4 0.00031 1E-08 71.7 8.7 71 56-145 5-76 (297)
36 1woq_A Inorganic polyphosphate 97.4 0.00058 2E-08 68.5 10.4 79 55-145 12-92 (267)
37 3vov_A Glucokinase, hexokinase 97.4 0.00016 5.4E-09 74.1 5.8 75 56-145 2-77 (302)
38 4ehu_A Activator of 2-hydroxyi 97.2 0.00064 2.2E-08 68.4 8.7 72 483-561 182-254 (276)
39 2i7n_A Pantothenate kinase 1; 97.2 0.0031 1.1E-07 65.5 13.3 75 480-559 275-358 (360)
40 4ehu_A Activator of 2-hydroxyi 97.1 0.0008 2.7E-08 67.7 7.4 64 56-132 2-65 (276)
41 4b9q_A Chaperone protein DNAK; 97.0 0.00078 2.7E-08 75.7 7.5 85 482-566 301-386 (605)
42 3qfu_A 78 kDa glucose-regulate 97.0 0.0013 4.5E-08 69.4 8.3 80 482-561 311-392 (394)
43 1zbs_A Hypothetical protein PG 97.0 0.001 3.4E-08 67.6 7.1 65 56-129 1-65 (291)
44 2aa4_A Mannac kinase, putative 97.0 0.0016 5.6E-08 65.7 8.7 53 56-115 2-54 (289)
45 2ap1_A Putative regulator prot 97.0 0.002 6.9E-08 66.4 9.4 76 55-145 24-100 (327)
46 3i33_A Heat shock-related 70 k 96.9 0.0015 5E-08 69.5 7.9 83 482-564 319-403 (404)
47 2yhx_A Hexokinase B; transfera 96.9 0.0023 7.7E-08 69.1 9.3 73 54-130 60-137 (457)
48 4gni_A Putative heat shock pro 96.9 0.0015 5E-08 69.6 7.8 81 482-562 312-401 (409)
49 3mcp_A Glucokinase; structural 96.9 0.00054 1.9E-08 72.0 4.2 73 55-145 9-86 (366)
50 2ews_A Pantothenate kinase; PA 96.8 0.009 3.1E-07 60.3 12.6 76 480-559 206-286 (287)
51 1dkg_D Molecular chaperone DNA 96.7 0.0023 7.9E-08 67.4 7.0 80 482-561 301-381 (383)
52 3djc_A Type III pantothenate k 96.6 0.0035 1.2E-07 62.7 7.2 61 56-129 3-63 (266)
53 1zxo_A Conserved hypothetical 96.5 0.00064 2.2E-08 69.1 1.1 63 56-129 1-63 (291)
54 3lm2_A Putative kinase; struct 96.3 0.0018 6E-08 63.3 3.2 65 55-142 6-70 (226)
55 1saz_A Probable butyrate kinas 96.3 0.0023 8E-08 67.6 4.1 68 55-129 2-72 (381)
56 2gup_A ROK family protein; sug 96.3 0.0056 1.9E-07 61.9 6.8 69 56-145 5-74 (292)
57 1bdg_A Hexokinase; phosphotran 96.2 0.013 4.3E-07 63.3 9.8 71 55-130 68-142 (451)
58 2q2r_A Glucokinase 1, putative 96.2 0.0031 1.1E-07 66.4 4.4 76 54-145 28-107 (373)
59 2v7y_A Chaperone protein DNAK; 96.1 0.0071 2.4E-07 66.4 7.2 83 482-564 270-353 (509)
60 1cza_N Hexokinase type I; stru 96.1 0.01 3.5E-07 69.6 8.6 73 55-131 78-156 (917)
61 3d2f_A Heat shock protein homo 95.9 0.0083 2.8E-07 68.1 6.7 84 482-565 302-386 (675)
62 1sz2_A Glucokinase, glucose ki 95.9 0.0085 2.9E-07 61.9 6.0 34 53-86 12-46 (332)
63 3zyy_X Iron-sulfur cluster bin 95.5 0.027 9.3E-07 62.6 8.5 77 55-131 206-297 (631)
64 3bex_A Type III pantothenate k 95.5 0.019 6.4E-07 56.8 6.4 59 56-129 4-62 (249)
65 1yuw_A Heat shock cognate 71 k 95.4 0.018 6.3E-07 63.8 6.9 83 482-564 298-382 (554)
66 3o8m_A Hexokinase; rnaseh-like 95.2 0.044 1.5E-06 59.3 8.9 72 55-129 80-154 (485)
67 1jce_A ROD shape-determining p 95.0 0.019 6.6E-07 59.3 5.1 76 482-560 242-324 (344)
68 2kho_A Heat shock protein 70; 94.9 0.0071 2.4E-07 67.8 1.6 83 482-564 301-384 (605)
69 2h3g_X Biosynthetic protein; p 94.8 0.051 1.7E-06 54.3 7.5 61 57-129 2-62 (268)
70 1cza_N Hexokinase type I; stru 94.7 0.068 2.3E-06 62.7 9.1 74 54-130 525-601 (917)
71 2ych_A Competence protein PILM 93.7 0.14 4.7E-06 53.5 8.3 64 483-546 273-338 (377)
72 4a2a_A Cell division protein F 93.7 0.055 1.9E-06 57.7 5.2 65 482-546 290-360 (419)
73 2ivn_A O-sialoglycoprotein end 93.4 0.21 7.1E-06 51.4 8.8 82 482-567 216-304 (330)
74 3qbx_A Anhydro-N-acetylmuramic 93.4 0.25 8.7E-06 51.2 9.3 76 482-563 257-338 (371)
75 4a2a_A Cell division protein F 93.1 0.35 1.2E-05 51.5 10.3 76 55-132 8-86 (419)
76 2ych_A Competence protein PILM 92.7 0.28 9.6E-06 51.1 8.7 71 55-132 13-86 (377)
77 3eno_A Putative O-sialoglycopr 92.5 0.42 1.4E-05 49.2 9.6 82 483-568 222-310 (334)
78 3cqy_A Anhydro-N-acetylmuramic 91.6 0.45 1.5E-05 49.3 8.5 78 52-129 2-97 (370)
79 3ttc_A HYPF, transcriptional r 91.6 0.57 2E-05 52.4 9.9 77 481-561 570-651 (657)
80 2ivn_A O-sialoglycoprotein end 91.6 0.57 2E-05 48.0 9.4 73 56-130 2-75 (330)
81 3vth_A Hydrogenase maturation 91.2 0.48 1.6E-05 54.1 8.9 77 482-562 665-748 (761)
82 3eno_A Putative O-sialoglycopr 91.0 0.37 1.3E-05 49.6 7.2 81 52-134 3-84 (334)
83 2zgy_A Plasmid segregation pro 90.3 0.44 1.5E-05 48.5 7.0 69 485-559 247-319 (320)
84 4g9i_A Hydrogenase maturation 90.3 0.52 1.8E-05 53.9 8.2 81 482-566 677-764 (772)
85 3hm8_A Hexokinase-3; glucose, 89.7 0.86 2.9E-05 48.5 8.7 59 55-118 59-119 (445)
86 3cet_A Conserved archaeal prot 89.1 0.33 1.1E-05 49.5 4.8 31 57-88 2-32 (334)
87 3f9m_A Glucokinase; hexokinase 87.4 0.91 3.1E-05 48.7 7.1 62 55-118 77-143 (470)
88 3en9_A Glycoprotease, O-sialog 87.0 1.8 6.1E-05 47.5 9.5 78 51-131 2-80 (540)
89 2ews_A Pantothenate kinase; PA 86.8 0.85 2.9E-05 45.8 6.1 26 55-81 20-45 (287)
90 3ven_A O-carbamoyltransferase 86.4 1.4 4.9E-05 48.4 8.1 79 483-565 280-361 (576)
91 3t69_A Putative 2-dehydro-3-de 85.3 0.75 2.6E-05 46.9 4.9 32 55-86 7-38 (330)
92 2f9w_A Pantothenate kinase; CO 85.1 1.7 5.8E-05 43.2 7.3 31 55-85 23-53 (271)
93 3nuw_A 2-OXO-3-deoxygalactonat 85.1 0.79 2.7E-05 46.0 4.9 33 55-88 6-38 (295)
94 1t6c_A Exopolyphosphatase; alp 81.4 2.2 7.5E-05 43.3 6.6 71 56-131 13-92 (315)
95 1nbw_A Glycerol dehydratase re 81.0 2.5 8.4E-05 46.0 6.9 72 472-545 505-582 (607)
96 3mdq_A Exopolyphosphatase; str 78.8 4 0.00014 41.4 7.5 72 55-131 4-84 (315)
97 4ijn_A Acetate kinase, acetoki 77.8 6.9 0.00024 40.8 8.9 46 491-537 300-347 (398)
98 1vhx_A Putative holliday junct 76.7 3.1 0.00011 37.4 5.3 24 56-79 4-27 (150)
99 4apw_A ALP12; actin-like prote 76.0 6.3 0.00022 40.0 8.1 44 515-560 279-323 (329)
100 4gni_A Putative heat shock pro 76.0 1.2 4.1E-05 46.8 2.7 26 50-77 9-34 (409)
101 2e2o_A Hexokinase; acetate and 74.0 5.7 0.00019 39.5 7.1 70 492-562 218-288 (299)
102 3r6m_A YEAZ, resuscitation pro 73.7 11 0.00037 35.9 8.5 63 56-132 3-65 (213)
103 3bzc_A TEX; helix-turn-helix, 73.7 7.1 0.00024 44.5 8.4 54 54-117 328-382 (785)
104 1u6z_A Exopolyphosphatase; alp 72.3 6.6 0.00023 42.7 7.5 74 55-131 11-91 (513)
105 3sk3_A Acetate kinase, acetoki 71.9 4.3 0.00015 42.6 5.6 47 491-537 315-363 (415)
106 3cqy_A Anhydro-N-acetylmuramic 71.7 9.1 0.00031 39.5 7.9 75 482-563 264-344 (370)
107 3en9_A Glycoprotease, O-sialog 71.2 10 0.00036 41.3 8.9 61 482-546 220-283 (540)
108 1yuw_A Heat shock cognate 71 k 70.7 1.9 6.5E-05 47.4 2.8 25 52-77 1-25 (554)
109 3hi0_A Putative exopolyphospha 70.5 9.3 0.00032 41.4 8.2 73 54-131 14-95 (508)
110 2gel_A Putative GRAM negative 70.5 10 0.00034 36.5 7.6 63 56-132 2-64 (231)
111 3cer_A Possible exopolyphospha 69.8 5.1 0.00018 41.1 5.6 73 55-130 16-96 (343)
112 2a6a_A Hypothetical protein TM 68.1 7.7 0.00026 37.1 6.1 65 55-133 12-76 (218)
113 2d0o_A DIOL dehydratase-reacti 67.7 11 0.00038 40.9 7.7 73 472-546 503-581 (610)
114 3r9p_A ACKA; ssgcid, seattle s 67.7 21 0.00072 37.0 9.6 46 491-537 291-338 (391)
115 2fsj_A Hypothetical protein TA 67.1 3.7 0.00013 42.1 3.9 66 492-559 273-342 (346)
116 3cj1_A Ectonucleoside triphosp 66.9 3.9 0.00013 43.7 4.1 60 54-115 33-100 (456)
117 3qfu_A 78 kDa glucose-regulate 65.5 3 0.0001 43.3 2.8 22 55-77 18-39 (394)
118 4htl_A Beta-glucoside kinase; 64.8 15 0.00051 36.5 7.9 70 492-562 216-292 (297)
119 4ep4_A Crossover junction endo 64.4 34 0.0012 31.0 9.3 55 56-117 2-62 (166)
120 2ch5_A NAGK protein; transfera 64.2 20 0.00067 36.2 8.8 73 491-564 235-327 (347)
121 3r8e_A Hypothetical sugar kina 63.9 14 0.00048 37.2 7.5 69 492-561 239-319 (321)
122 2fxu_A Alpha-actin-1, actin, a 62.5 4.8 0.00016 41.7 3.7 47 515-561 294-349 (375)
123 3qbx_A Anhydro-N-acetylmuramic 62.0 9.7 0.00033 39.3 5.8 75 55-131 2-95 (371)
124 2gup_A ROK family protein; sug 60.3 20 0.00069 35.2 7.8 69 492-561 206-287 (292)
125 2aa4_A Mannac kinase, putative 59.8 15 0.0005 36.2 6.6 68 492-560 212-287 (289)
126 1dkg_D Molecular chaperone DNA 58.6 3.4 0.00012 42.7 1.7 21 56-77 3-23 (383)
127 1xho_A Chorismate mutase; sout 58.3 11 0.00038 33.2 4.6 38 96-133 43-80 (148)
128 1nu0_A Hypothetical protein YQ 57.9 30 0.001 30.3 7.6 24 55-78 3-26 (138)
129 2qm1_A Glucokinase; alpha-beta 57.3 20 0.00068 35.8 7.3 69 492-561 241-321 (326)
130 4db3_A Glcnac kinase, N-acetyl 56.8 13 0.00045 37.5 5.8 68 492-560 248-325 (327)
131 3vgl_A Glucokinase; ROK family 56.3 19 0.00064 36.2 6.8 72 492-564 231-315 (321)
132 2yhw_A Bifunctional UDP-N-acet 55.9 38 0.0013 34.1 9.2 67 492-561 263-338 (343)
133 1hjr_A Holliday junction resol 54.9 52 0.0018 29.5 8.8 54 56-117 2-58 (158)
134 2zgy_A Plasmid segregation pro 54.6 7.6 0.00026 39.1 3.6 23 57-79 2-24 (320)
135 1dbf_A Protein (chorismate mut 54.5 14 0.00047 31.9 4.5 38 96-133 14-51 (127)
136 4b9q_A Chaperone protein DNAK; 54.4 6.1 0.00021 43.9 3.0 22 55-77 2-23 (605)
137 2e1z_A Propionate kinase; TDCD 54.2 33 0.0011 35.9 8.3 46 492-538 308-355 (415)
138 1ufy_A Chorismate mutase; shik 52.6 17 0.00059 31.1 4.8 38 96-133 13-51 (122)
139 3aap_A Ectonucleoside triphosp 52.5 29 0.00098 35.6 7.5 19 55-73 3-21 (353)
140 3psf_A Transcription elongatio 51.6 13 0.00046 43.6 5.3 31 54-84 518-553 (1030)
141 3htv_A D-allose kinase, alloki 51.3 56 0.0019 32.5 9.4 65 492-561 222-299 (310)
142 2yhx_A Hexokinase B; transfera 50.3 49 0.0017 35.2 9.1 48 516-563 385-444 (457)
143 4gib_A Beta-phosphoglucomutase 50.0 3.6 0.00012 39.6 0.2 22 58-79 9-38 (250)
144 1iv0_A Hypothetical protein; r 49.8 18 0.00062 29.7 4.5 22 57-78 3-24 (98)
145 3i33_A Heat shock-related 70 k 49.6 7 0.00024 40.6 2.4 22 55-77 23-44 (404)
146 2v7y_A Chaperone protein DNAK; 48.6 8.9 0.0003 41.5 3.1 19 56-74 3-21 (509)
147 1sz2_A Glucokinase, glucose ki 48.6 30 0.001 34.8 7.0 49 514-562 264-327 (332)
148 3o8m_A Hexokinase; rnaseh-like 46.6 39 0.0013 36.2 7.6 83 481-564 372-472 (485)
149 2hoe_A N-acetylglucosamine kin 46.5 44 0.0015 34.3 8.0 69 492-561 293-371 (380)
150 1saz_A Probable butyrate kinas 46.1 34 0.0012 35.3 7.0 68 492-559 272-346 (381)
151 2d0o_A DIOL dehydratase-reacti 45.3 35 0.0012 37.1 6.8 67 54-127 1-71 (610)
152 1zbs_A Hypothetical protein PG 43.9 29 0.001 34.2 5.9 70 491-565 213-284 (291)
153 2kho_A Heat shock protein 70; 43.1 9.9 0.00034 42.2 2.4 21 56-77 3-23 (605)
154 1jce_A ROD shape-determining p 41.4 11 0.00038 38.1 2.3 20 56-76 4-23 (344)
155 3khy_A Propionate kinase; csgi 40.5 29 0.001 35.8 5.2 46 491-537 290-337 (384)
156 3vov_A Glucokinase, hexokinase 40.4 50 0.0017 32.7 7.0 69 492-561 216-295 (302)
157 3d2f_A Heat shock protein homo 40.0 11 0.00037 42.5 2.1 18 57-74 4-21 (675)
158 3psi_A Transcription elongatio 39.8 26 0.00091 41.9 5.4 31 54-84 515-550 (1219)
159 1z6r_A MLC protein; transcript 39.5 64 0.0022 33.3 7.9 67 492-559 313-391 (406)
160 1nbw_A Glycerol dehydratase re 38.3 34 0.0012 37.2 5.5 60 54-120 1-63 (607)
161 3zx3_A Ectonucleoside triphosp 38.2 34 0.0012 36.3 5.5 60 54-115 33-100 (452)
162 3epq_A Putative fructokinase; 37.2 59 0.002 32.2 6.9 53 299-368 89-143 (302)
163 3js6_A Uncharacterized PARM pr 35.6 28 0.00095 35.7 4.2 45 514-561 290-336 (355)
164 1z05_A Transcriptional regulat 35.5 83 0.0028 32.8 8.1 68 492-561 336-415 (429)
165 4h0p_A Acetate kinase; askha ( 35.2 36 0.0012 35.8 4.9 49 491-539 323-378 (438)
166 4apw_A ALP12; actin-like prote 35.1 17 0.00058 36.8 2.4 23 50-72 2-24 (329)
167 2ap1_A Putative regulator prot 34.9 36 0.0012 34.0 4.9 67 492-559 248-324 (327)
168 2fsj_A Hypothetical protein TA 33.3 21 0.00071 36.4 2.8 22 56-79 22-43 (346)
169 2q2r_A Glucokinase 1, putative 32.7 59 0.002 33.2 6.2 69 492-561 283-371 (373)
170 1zc6_A Probable N-acetylglucos 32.6 32 0.0011 34.1 4.0 62 491-560 229-292 (305)
171 1bdg_A Hexokinase; phosphotran 28.9 86 0.0029 33.2 6.8 47 517-563 395-448 (451)
172 2iir_A Acetate kinase; transfe 28.0 50 0.0017 34.4 4.5 47 492-539 300-348 (403)
173 4h0o_A Acetate kinase; askha ( 27.8 56 0.0019 33.9 4.8 47 491-538 303-351 (404)
174 1g99_A Acetate kinase; alpha/b 27.7 55 0.0019 34.2 4.8 46 492-538 300-347 (408)
175 1k8k_A ARP3, actin-like protei 27.6 18 0.00061 37.8 1.1 47 515-561 316-387 (418)
176 1woq_A Inorganic polyphosphate 26.9 63 0.0021 31.2 5.0 46 514-561 214-261 (267)
177 1zxo_A Conserved hypothetical 26.6 16 0.00055 36.1 0.5 63 492-560 212-277 (291)
178 1dw0_A Cytochrome C; asparagin 26.2 17 0.00057 30.8 0.5 33 193-225 78-111 (112)
179 3mdq_A Exopolyphosphatase; str 26.0 71 0.0024 31.9 5.3 31 56-87 132-162 (315)
180 1eik_A RNA polymerase subunit 26.0 53 0.0018 25.7 3.3 35 265-315 23-57 (77)
181 3twe_A Alpha4H; unknown functi 25.7 1E+02 0.0036 18.1 3.6 21 596-616 4-24 (27)
182 4am6_A Actin-like protein ARP8 23.4 30 0.001 38.4 2.0 47 491-540 479-526 (655)
183 3hm8_A Hexokinase-3; glucose, 22.7 90 0.0031 32.9 5.4 84 480-564 339-439 (445)
184 2nu8_B SCS-beta, succinyl-COA 22.0 3.7E+02 0.013 27.6 9.9 65 514-578 310-383 (388)
185 2ic6_A Nucleocapsid protein; h 21.8 71 0.0024 25.0 3.2 46 575-620 27-72 (78)
186 2k48_A Nucleoprotein; viral pr 21.5 69 0.0024 26.4 3.2 40 581-620 63-102 (107)
187 3khy_A Propionate kinase; csgi 21.2 78 0.0027 32.6 4.4 31 55-85 2-33 (384)
188 1hmj_A RPB5, protein (subunit 21.2 51 0.0017 25.9 2.3 35 264-314 20-54 (78)
189 3f9m_A Glucokinase; hexokinase 20.6 70 0.0024 34.0 4.1 85 480-565 363-464 (470)
190 1khd_A Anthranilate phosphorib 20.1 4.3E+02 0.015 26.6 9.8 81 518-600 89-176 (345)
No 1
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=4.8e-97 Score=830.99 Aligned_cols=539 Identities=49% Similarity=0.868 Sum_probs=465.5
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
|+|+||||+|||++|++++|.+|+++++.+.+++.+. .+||+||||++||+++++++++++++.++++.+|.+||||+|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDAT 83 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEcCC
Confidence 4799999999999999999999999999999998655 899999999999999999999999988777789999999999
Q ss_pred CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccChhHHhhhCCCCCCCChHHHHHHHHHhcchhHHhhcc
Q 007010 133 CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFR 212 (621)
Q Consensus 133 ~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~ 212 (621)
+++|+||++|+||......++.+|+|+|+|+|+.++++++++..++++++||+++++.++++||+|+++|+||+|+++.+
T Consensus 84 ~~~v~~D~~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~ 163 (554)
T 3l0q_A 84 CSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGH 163 (554)
T ss_dssp SCEEEEETTSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHTCGGGGGBTTCCCTTSHHHHHHHHHHHCHHHHHHEEE
T ss_pred CceEEECCCCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhHHHHHHHhCCCCChhhHHHHHHHHHHhChHHHHHhce
Confidence 99999999999995333344557999999999999999998876789999999999999999999999999999999999
Q ss_pred eecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCcccccCC
Q 007010 213 WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPG 292 (621)
Q Consensus 213 ~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~~v~~~g 292 (621)
|++++|||.|+|||+...+++|.++. ..||+++++||+++|+.+||++.+...+..+++++++++
T Consensus 164 ~~~~~dyl~~~LTG~~~~s~as~t~~---------------~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~i~~~~ 228 (554)
T 3l0q_A 164 LFDLPDFLTWRATKDETRSLCSTVCK---------------WTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMG 228 (554)
T ss_dssp EEEHHHHHHHHHHSCCCEEHHHHHHH---------------SCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSCEECTT
T ss_pred EEcHHHHHHHHHhCCccccccchhhc---------------cccccccCCCCHHHHHHcCCccccchhHHhCCCcccCCc
Confidence 99999999999999986555443211 137889999999999999998632000002333588999
Q ss_pred CccC-CCccHHHHHHcCCCCCCcEEEechhhhhhhccccccc-CccchhhhhhhhhhccceEEEEecccceecceeCccc
Q 007010 293 HPLG-SGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESV-PESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKL 370 (621)
Q Consensus 293 ~~~G-~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~-~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~~~~ 370 (621)
+++| + |++++|+++||++||||++|++|++|+++|+.|.. +||.. ....+++.+++|||++++.+++++.
T Consensus 229 ~~~G~~-lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~-------~~~~~~~~~~~GTs~~~~~~~~~~~ 300 (554)
T 3l0q_A 229 APLGHG-LSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGEN-------ANFDRRIALIGGTSTAHMAMSRSAH 300 (554)
T ss_dssp CBCTTS-SCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSCC-------CCTTTEEEEECSSSEEEEEEESSCC
T ss_pred CeeCcc-cCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCcc-------ccccceEEEEecchheeeeecCCcc
Confidence 9999 8 99999999999999999999999999999863444 44300 0001278899999999999999888
Q ss_pred ccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCCCccCCCC
Q 007010 371 FIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTE 450 (621)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~ 450 (621)
.+++.|.+++++..|+.|+++++++++|.+++||++.+...+++.+.++..+.+.|++|+++++++++. .|..+.+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~ 378 (554)
T 3l0q_A 301 FISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGE--PENIAFLTN 378 (554)
T ss_dssp CCTTSEEEEETSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSS--GGGGGGGGT
T ss_pred ccCCcceeecccccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCC--CCccccccC
Confidence 777777666666678999999999999999999999875433344455556788999999988876432 110012379
Q ss_pred CeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHH
Q 007010 451 DIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLF 530 (621)
Q Consensus 451 gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w 530 (621)
|++|+|||.|||+|+||+++||+|+|++.+|++.|++|+|||++|||||++|++++.|++.|.++++|+++||++||++|
T Consensus 379 gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~ 458 (554)
T 3l0q_A 379 DIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIF 458 (554)
T ss_dssp TCCEECCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHH
T ss_pred ceEEcccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHH
Confidence 99999999999999999999999999999999999988899999999999999999999888899999999999999999
Q ss_pred HHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHHHHHHHHHHHH
Q 007010 531 LQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQV 610 (621)
Q Consensus 531 ~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~ 610 (621)
+||+|||+|+||+++...|++|+|||++|++++|.|+|++++++++++..++|+|+ |+++++.|+++|++|+++|++++
T Consensus 459 ~Qi~ADv~g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~~~~~~~~P~-~~~~~~~Y~~~y~~y~~l~~~~~ 537 (554)
T 3l0q_A 459 VQEHANATGCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMSRIGKTVTPQ-TNKIKAYYDRKYRVFHQMYHDHM 537 (554)
T ss_dssp HHHHHHHHCCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHCCEEEEECCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhcCCCcEEeCC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888998888999994 47899999999999999999999
Q ss_pred HHHHHHHH
Q 007010 611 SQRSIMAQ 618 (621)
Q Consensus 611 ~~~~~~~~ 618 (621)
+++++|++
T Consensus 538 ~~~~~~~~ 545 (554)
T 3l0q_A 538 RYQALMQE 545 (554)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHhc
Confidence 99999986
No 2
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=1.6e-94 Score=801.22 Aligned_cols=486 Identities=20% Similarity=0.314 Sum_probs=433.5
Q ss_pred CCCCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007010 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 52 m~~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (621)
|+|+|+||||+|||++|++++|.+|+++.+.+.+++.+. .+||+||||++||+++++++++++++.+ .+|++||||
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~I~~Igis 77 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWS 77 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SEEEEEEEE
T ss_pred CCCCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CCeEEEEEE
Confidence 667899999999999999999999999999999998654 8999999999999999999999988754 689999999
Q ss_pred CC-CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhH
Q 007010 131 AT-CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESW 207 (621)
Q Consensus 131 ~~-~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~ 207 (621)
+| +++|+||++|+|| +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|
T Consensus 78 ~q~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~ 148 (504)
T 3ll3_A 78 SQMHSLIGLGSDDELL---------TNSITWADNCAKSIVQDAKNRGFAQQIYRKTGMPMHPMAPIYKLLWLKNKKTEVF 148 (504)
T ss_dssp ECSSCBEEECTTSCBS---------SCEECTTCCTTHHHHHHHHHHTHHHHHHHHHCCCSCTTSHHHHHHHHHHHCHHHH
T ss_pred CCCCcEEEECCCCCCc---------ccceeCCccCHHHHHHHHHhccCHHHHHHHHCCCCCcccHHHHHHHHHHcChHHH
Confidence 98 9999999999999 8999999999999999998875 6799999999999999999999999999999
Q ss_pred HhhcceecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCcc
Q 007010 208 SMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRS 287 (621)
Q Consensus 208 ~~~~~~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~~ 287 (621)
+++.+|++++|||.|+|||+.. ++.| .+|+|++||+++++||+++|+.+||++.+ || +
T Consensus 149 ~~~~~~~~~~dyl~~~LTG~~~-~d~s--------------~As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP----~ 206 (504)
T 3ll3_A 149 SQAQKWIGIKEYIIFRLTGKLV-TDTT--------------MAAGTGILNLKTLTWDQELLDILKIKKEQ---LP----K 206 (504)
T ss_dssp HHCCEEECHHHHHHHHHHSCCE-EEHH--------------HHTTTTCBCTTTSSBCHHHHHHHTCCGGG---SC----E
T ss_pred HHHhheeCHHHHHHHHHhCCcc-cchh--------------HhhcccCeeCCCCCcCHHHHHHcCCCHHH---CC----C
Confidence 9999999999999999999875 3333 36688999999999999999999999754 47 6
Q ss_pred cccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceecceeC
Q 007010 288 VAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR 367 (621)
Q Consensus 288 v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~ 367 (621)
++++++++|+ |++++|+++||++||||++|++|++|+++|+ |..+| |++++++|||+++.+.++
T Consensus 207 i~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~ 270 (504)
T 3ll3_A 207 IAQPTKVIFP-IKTEYVKKLGIDSDTKIILGASDGYLSTIGV-NAIDS--------------DHCALNVGTSGAIRTIVD 270 (504)
T ss_dssp EECTTCEECC-CCHHHHHHHTCCTTCEEEEEEEHHHHHHHTT-TCCST--------------TEEEEEESSSEEEEEEES
T ss_pred eeCCcceeec-cCHHHHHhcCCCcCCCEEEEccHHHHHHHhC-CCCCC--------------CcEEEEechhhhheeeCC
Confidence 8899999997 9999999999999999999999999999998 66655 589999999999999999
Q ss_pred cccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCCCccC
Q 007010 368 NKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAA 447 (621)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~ 447 (621)
++..++.... +++...++.|+++++++++|.+++|+++.++..+ ..++++.+++++ +|+
T Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~-----------~~~~~~~~~a~~---------~~~ 329 (504)
T 3ll3_A 271 QPKIDPSASY-FCYPADKTHYLLGGPVNNGGIVFNWARQTLFDAD-----------ETPQDFLDVAQT---------APA 329 (504)
T ss_dssp SCCCCTTCCS-EEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTT-----------CCHHHHHHHHHT---------SCT
T ss_pred CcccCCCCce-EEEEeCCCeEEEEeehhhHHHHHHHHHHHhccch-----------hHHHHHHHHHhc---------CCC
Confidence 8876653321 3333346789999999999999999999875321 112222223433 246
Q ss_pred CCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC
Q 007010 448 LTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN 527 (621)
Q Consensus 448 g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s 527 (621)
+++|++|+|||+|+|+|+||+++||+|+|++..|++.|+ +||++||+||.+|++++.|++.+.++++|+++||++||
T Consensus 330 g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s 406 (504)
T 3ll3_A 330 GSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKS 406 (504)
T ss_dssp TGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCS
T ss_pred CCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcC
Confidence 899999999999999999999999999999999999985 56999999999999999999888889999999999999
Q ss_pred HHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHHHHHHHHH
Q 007010 528 PLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFE 607 (621)
Q Consensus 528 ~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~ 607 (621)
++|+||+||++|+||+++...|++|+|||++|++++|.|+|+++ ++++++..++|+| +++.++.|+++|++|+++|+
T Consensus 407 ~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~-~~~~~~~~~~~~P--~~~~~~~Y~~~y~~y~~l~~ 483 (504)
T 3ll3_A 407 DFVRQLCANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSE-IGQFAQADKVYFP--NPKEAATYQKLFPLYCEIRN 483 (504)
T ss_dssp HHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGG-GGGTSCEEEEECC--CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHH-HHHhcCCCeEEcc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987 5677778889999 99999999999999999999
Q ss_pred HHHHHHH
Q 007010 608 QQVSQRS 614 (621)
Q Consensus 608 ~~~~~~~ 614 (621)
+++++.+
T Consensus 484 ~l~~~~~ 490 (504)
T 3ll3_A 484 ALAASYG 490 (504)
T ss_dssp HHGGGSG
T ss_pred HHHHHHH
Confidence 9987543
No 3
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=4.5e-94 Score=798.43 Aligned_cols=489 Identities=20% Similarity=0.268 Sum_probs=437.3
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
++|+||||+|||++|++++|.+|+++.+.+.+++... .+||+||||++||+++++++++++++.++++.+|.+|||++|
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~~ 85 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTGM 85 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEEEC
T ss_pred CCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChhheEEEEEECC
Confidence 4799999999999999999999999999999998654 899999999999999999999999887777789999999998
Q ss_pred -CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHHh
Q 007010 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (621)
Q Consensus 133 -~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 209 (621)
+++|+||++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|++
T Consensus 86 ~~~~v~~D~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 156 (508)
T 3ifr_A 86 LPAVVLLDDRGAVL---------RPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGA 156 (508)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCCCHHHHHHHHHHSCHHHHHHHHSSCSSTTSHHHHHHHHHHHCHHHHHT
T ss_pred CCcEEEECCCCCCc---------ccceeccccChHHHHHHHHhhccHHHHHHHHCCCCChhhHHHHHHHHHHcCHHHHHH
Confidence 9999999999999 8999999999999999998875 578999999999999999999999999999999
Q ss_pred hcceecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCcccc
Q 007010 210 VFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVA 289 (621)
Q Consensus 210 ~~~~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~~v~ 289 (621)
+.+|++++|||.|+|||+.. ++.|+ +|+|++||+++++||+++|+.+|||..+ || +++
T Consensus 157 ~~~~l~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP----~i~ 214 (508)
T 3ifr_A 157 IATVCGSYDYINMLLTGERV-VDRNW--------------ALEGGFIDLASGTVEADLVALAHIPPSA---VP----PAH 214 (508)
T ss_dssp CSEEECHHHHHHHHHHCCCC-EEHHH--------------HHHHTCEETTTTEECHHHHHTTTSCGGG---SC----CEE
T ss_pred HhhhcCchHHHHHHhcCCcc-ccHhH--------------hhcccCccCccCCCCHHHHHHcCCCHHH---CC----CCc
Confidence 99999999999999999874 34433 5678899999999999999999999754 47 688
Q ss_pred cCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceecceeCcc
Q 007010 290 FPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNK 369 (621)
Q Consensus 290 ~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~~~ 369 (621)
++++++|+ |++++|+++||++|+||++|++|++|+++|+ |..+| |++++++|||+++.+.++++
T Consensus 215 ~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~~~ 278 (508)
T 3ifr_A 215 PTHRVLGA-VTAEAAALTGLPTGLPVYGGAADHIASALAA-GITRP--------------GDVLLKFGGAGDIIVASATA 278 (508)
T ss_dssp CTTSEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCCST--------------TEEEEEESSSEEEEECBSCC
T ss_pred CCCCeeec-cCHHHHHHhCCCCCCeEEEECchHHHHHHhC-CCCCC--------------CcEEEEechhhhheeeCCCc
Confidence 99999997 9999999999999999999999999999999 66655 58999999999999999988
Q ss_pred cccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCC-HHHHHHHHHHhhhhhcCCCCccCC
Q 007010 370 LFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVS-LFELLNGTLESMIHERNSPFVAAL 448 (621)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~p~~~~g 448 (621)
..++.. ..+ ++..++.|+++++++++|.+++|+++.+.. .+.+ .|++|++++++. |++
T Consensus 279 ~~~~~~-~~~-~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~----------~~~~~~~~~l~~~a~~~---------~~~ 337 (508)
T 3ifr_A 279 KSDPRL-YLD-YHLVPGLYAPNGCMAATGSALNWLAKLLAP----------EAGEAAHAQLDALAAEV---------PAG 337 (508)
T ss_dssp CCBTTB-BCC-BCSSTTCBCCEEEESSSHHHHHHHHHHHST----------TCTTHHHHHHHHHHHTS---------CTT
T ss_pred ccCCCc-cee-eeecCCceEEechhhhhHHHHHHHHHHHhh----------cCCCCCHHHHHHHHhcC---------CCC
Confidence 776663 223 445688999999999999999999998731 0121 588888877653 368
Q ss_pred CCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCH
Q 007010 449 TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNP 528 (621)
Q Consensus 449 ~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~ 528 (621)
++|++|+|||.|||+|+||+++||+|+|++..|++.|+ +||++||+||.+|++++.|++.|.++++|+++||++||+
T Consensus 338 ~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~ 414 (508)
T 3ifr_A 338 ADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHL---WRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSR 414 (508)
T ss_dssp GGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCH
T ss_pred CCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCH
Confidence 99999999999999999999999999999999999985 569999999999999999998888999999999999999
Q ss_pred HHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHHHHHHHHHH
Q 007010 529 LFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQ 608 (621)
Q Consensus 529 ~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~ 608 (621)
+|+||+||++|+||+++...|++|+|||++|++++|.|+|++++. ++++..++|+| +++.++.|+++|++|+++|++
T Consensus 415 ~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~-~~~~~~~~~~P--~~~~~~~y~~~y~~~~~~~~~ 491 (508)
T 3ifr_A 415 VWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVT-ALVRTGEKITP--DPAKAEVYDRLYRDFSALYAT 491 (508)
T ss_dssp HHHHHHHHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGGG-GGSEEEEEECC--CGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHHH-hhcCCCeEECc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998864 57778899999 999999999999999999999
Q ss_pred HHHHHHHH
Q 007010 609 QVSQRSIM 616 (621)
Q Consensus 609 ~~~~~~~~ 616 (621)
++++.+-+
T Consensus 492 ~~~~~~~~ 499 (508)
T 3ifr_A 492 LHPFFHRS 499 (508)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHh
Confidence 99865433
No 4
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=8.7e-94 Score=796.68 Aligned_cols=486 Identities=21% Similarity=0.293 Sum_probs=434.2
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
|+|+||||+|||++|++++|.+|+++.+.+.+++.+. .+||+||||++||+++++++++++ +.+.++.+|.+|||++|
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~q 82 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQ 82 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEEC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEecc
Confidence 5799999999999999999999999999999998665 899999999999999999999998 76667789999999998
Q ss_pred -CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHHh
Q 007010 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (621)
Q Consensus 133 -~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 209 (621)
+++|+||++|+|| +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|++
T Consensus 83 ~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 153 (511)
T 3hz6_A 83 MQNFLPLDQDHEPL---------HRAVLYSDKRPLKEAEEINARHGADNLWSALENPMTAASILPKLVFWRASFPQAFGR 153 (511)
T ss_dssp CSCBEEECTTSCBS---------SCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCSTTSHHHHHHHHHHHCHHHHTT
T ss_pred cccEEEECCCcCCC---------cCceecCCCCHHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhChHHHHH
Confidence 9999999999999 8999999999999999998764 679999999999999999999999999999999
Q ss_pred hcceec-chhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCccc
Q 007010 210 VFRWMD-LSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSV 288 (621)
Q Consensus 210 ~~~~l~-~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~~v 288 (621)
+.+|++ ++|||.|+|||+.. ++.|+ +|+|++||+++++||+++|+.+||++.+ || ++
T Consensus 154 ~~~~l~~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP----~i 211 (511)
T 3hz6_A 154 LRHVVLGAKDYVVLRLTGRHA-TDRTN--------------ASTTGLYRPKDDAWHVELLADYGFSLDL---MP----RL 211 (511)
T ss_dssp CCEEECSHHHHHHHHHHSCCE-ECHHH--------------HHHTTCEETTTTEECHHHHHHTTCCGGG---SC----EE
T ss_pred HHHHhcCcHHHHHHHHhCCce-eeHhH--------------hhcccceeCCCCCcCHHHHHHhCCCHHH---CC----CC
Confidence 999999 99999999999874 34433 5688999999999999999999999754 47 68
Q ss_pred ccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceecceeC-
Q 007010 289 AFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR- 367 (621)
Q Consensus 289 ~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~- 367 (621)
+++++++|+ |++++|+++||++|+||++|++|++|+++|+ |..++ |++++++|||+++.+.++
T Consensus 212 ~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~~ 275 (511)
T 3hz6_A 212 LEPGEQVGG-VSALAARQTGFVSGTPVLCGLGDAGAATLGV-GVLDD--------------EDAYLHLGTTGWLARLTQT 275 (511)
T ss_dssp CCTTSEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEEEEEEC
T ss_pred cCCCCcccc-cCHHHHHhhCCCCCCeEEEECchHHHHHHhC-CCCCC--------------CcEEEEecchhhheeecCC
Confidence 899999997 9999999999999999999999999999999 66655 589999999999999988
Q ss_pred ccccc-CCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCCCcc
Q 007010 368 NKLFI-PGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVA 446 (621)
Q Consensus 368 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~ 446 (621)
++..+ +......+++..++.|...++++++|.+++|+++.+... ....|++|++++++. |
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~----------~~~~~~~l~~~a~~~---------~ 336 (511)
T 3hz6_A 276 DPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHR----------PGEDCAEYFHMAAAE---------V 336 (511)
T ss_dssp CCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGTCC----------TTSCSHHHHHHHHHH---------H
T ss_pred eecccCCCCceEEEEEecCCceEEEeehhhHHHHHHHHHHHhccc----------ccccHHHHHHHHHhC---------C
Confidence 88766 543222233456788766699999999999999987510 012578888888765 3
Q ss_pred CC---CCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC
Q 007010 447 AL---TEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG 523 (621)
Q Consensus 447 ~g---~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GG 523 (621)
++ ++|++|+|||+|+|+|+||+++||+|+|++..|++.|+ +||++||+||.+|++++.|++ |. +++|+++||
T Consensus 337 ~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GG 411 (511)
T 3hz6_A 337 QGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGG 411 (511)
T ss_dssp TTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESG
T ss_pred CCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCc
Confidence 57 89999999999999999999999999999999999995 569999999999999999998 88 999999999
Q ss_pred CCCCHHHHHHHHHhhCCce-eeccCCCchhHHHHHHHHhhccccCCHHHHHHHh---hcCCcEEcCCCChhhHHHHHHHH
Q 007010 524 LAKNPLFLQQHADIIGCPI-ILPRENESVLLGAAILGAVAAKRYSSLIEAMKAM---NAAGQVIHPSKDPKVKKYHDAKY 599 (621)
Q Consensus 524 ga~s~~w~Qi~Advlg~pV-~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~---~~~~~~~~P~~~~~~~~~y~~~y 599 (621)
++||++|+||+||++|+|| +++...|++|+|||++|++++|.|+|++++++++ ++..++|+| +++.++.|+++|
T Consensus 412 ga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~~~y~~~y 489 (511)
T 3hz6_A 412 GARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREPASNILHP--QPCDEGRRRRKF 489 (511)
T ss_dssp GGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHTC---CCCBCC--CCCCHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhccCCCCeEECc--CHHHHHHHHHHH
Confidence 9999999999999999999 9989999999999999999999999998888888 888899999 999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 007010 600 LIFRELFEQQVSQR 613 (621)
Q Consensus 600 ~~y~~l~~~~~~~~ 613 (621)
++|+++|++++++.
T Consensus 490 ~~~~~~~~~l~~~~ 503 (511)
T 3hz6_A 490 ERFKQCVETLGRLD 503 (511)
T ss_dssp HHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999988754
No 5
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=1.7e-91 Score=788.36 Aligned_cols=504 Identities=26% Similarity=0.447 Sum_probs=437.9
Q ss_pred CCeEEEEecCccceeeEEEcC-CCCEEEEEEeeec-----cc-cC------CCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDE-SGKLLGSASSPIQ-----IW-KE------GDCIEQSSTDIWHAICAAVDSACSLANVD 120 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~-~g~vv~~~~~~~~-----~~-~~------~g~~eqd~~~~~~~~~~~l~~~~~~~~~~ 120 (621)
++|+||||+|||++|++|+|. +|+++.+.+.+++ .+ +. +||+||||++||+++++++++++++.+++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~~~ 83 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESGVD 83 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC---C
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC
Confidence 469999999999999999998 9999999999997 33 24 89999999999999999999999987777
Q ss_pred CCCEEEEEEcCC-CceEEecCCCCceeecCC--CCCCcceeEEcCcchHHHHHHHHcc----ChhHHhhhCCCCCCCChH
Q 007010 121 GEEVKGVGFAAT-CSLVAVDADGSPVSVSWN--GDSRRNIIVWMDHRAVKQAEKINSR----NSPVLQYCGGAVSPEMQP 193 (621)
Q Consensus 121 ~~~I~aIgis~~-~~~v~vD~~G~pl~~~~~--~~~~~p~i~W~D~Ra~~~~~~l~~~----~~~~~~~tG~~~~~~~~~ 193 (621)
+.+|.+||||+| +++|+||++|+||.+..+ +.+..++|+|+|+|+.++++++++. .+.++++||+++++.+++
T Consensus 84 ~~~I~~Igis~q~~~~v~~D~~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG~~~~~~~~~ 163 (572)
T 3jvp_A 84 ADDVIGIGVDFTACTMLPVDEEGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYGGKISSEWMI 163 (572)
T ss_dssp CSCEEEEEEEECSSCEEEECTTSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGTTCCCSSSHH
T ss_pred hhHEEEEEEecCCCcEEEECCCCCCCccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhCCCCCchhHH
Confidence 889999999998 999999999999943211 1111228999999999999999775 257889999999999999
Q ss_pred HHHHHHHHhcchhHHhhcceecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCC-CHHHHHHcC
Q 007010 194 PKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGW-DDEFWEEIG 272 (621)
Q Consensus 194 ~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~W-s~~ll~~~g 272 (621)
+||+|+++|+||+|+++.+|++++|||.|+|||+.. ++.|+ +|.|++|| ++++| |+++|+.+|
T Consensus 164 ~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~--------------As~t~l~d-~~~~W~~~ell~~~g 227 (572)
T 3jvp_A 164 AKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIV-KNSCT--------------AGYKAIWH-KREGYPSNEFFKALD 227 (572)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEHHHHHHHHHHSSCC-EEHHH--------------HHHHSCCB-TTTBSCCHHHHHTTC
T ss_pred HHHHHHHHhCHHHHHHhheEecHHHHHHHHhcCCce-eehhh--------------ccccceeC-CCCCcCCHHHHHHhC
Confidence 999999999999999999999999999999999875 33332 56788999 99999 999999998
Q ss_pred C-----CccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhh
Q 007010 273 L-----GDLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEA 347 (621)
Q Consensus 273 i-----~~~~~~~lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~ 347 (621)
+ ++. .| +|+++++++++|+ |++++|+++||++|+||++|++|++|+++|+ |..+|
T Consensus 228 ~~l~~i~~~---~L---~p~i~~~~~~~G~-l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~-g~~~~------------ 287 (572)
T 3jvp_A 228 PRLEHLTTT---KL---RGDIVPLGERAGG-LLPEMAEKMGLNPGIAVAVGNVDAHAAVPAV-GVTTP------------ 287 (572)
T ss_dssp GGGTTSTTT---TT---CSCEECTTSEEEE-CCHHHHHHHTSCTTCEEECCEETTTTHHHHT-TCCSS------------
T ss_pred cccccCCHh---HC---CCccCCcCccccc-cCHHHHHHhCCCCCCeEEEeCchHHHHHhhC-CCCCC------------
Confidence 4 322 23 1278899999997 9999999999999999999999999999999 66665
Q ss_pred ccceEEEEecccceecceeCcccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHH
Q 007010 348 ICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFE 427 (621)
Q Consensus 348 ~~~~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~ 427 (621)
|++.+++|||+++..+++.+...++.+..+..+..|+.|.++++++++|.+++||++.++..+ ..+.++..|.+.|+
T Consensus 288 --g~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~-~~~~~~~~g~~~~~ 364 (572)
T 3jvp_A 288 --GKLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAA-TFDEAQEKGVNVHA 364 (572)
T ss_dssp --EEEEEEESSSEEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHH-HHHHHHHTTBCHHH
T ss_pred --CcEEEEecchhheeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccchh-hHHHHHhcCCCHHH
Confidence 589999999999888888766555544333334568899999999999999999999986432 23344455778899
Q ss_pred HHHHHHHhhhhhcCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007010 428 LLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEH 507 (621)
Q Consensus 428 ~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~ 507 (621)
+|++++++. |++++|++|+|||.|||+|+||+++||+|+|++..|++.|+ +||++|||||.+|++++.
T Consensus 365 ~l~~~a~~~---------~~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~l---~RAvlEgia~~~r~~~~~ 432 (572)
T 3jvp_A 365 LLEEKASQL---------RPGESGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEEI---YRALLEATAFGTRAIVDA 432 (572)
T ss_dssp HHHHHHTSS---------CTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC---------CCCCCCeEeCCccCCCCCCCCCCCcCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHH
Confidence 999887653 46899999999999999999999999999999999999985 569999999999999999
Q ss_pred HHhCCCCcCEEEEecCCC-CCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhcc----ccCCHHHHHHHhhcC-Cc
Q 007010 508 CNAHGHKIDTLLACGGLA-KNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAK----RYSSLIEAMKAMNAA-GQ 581 (621)
Q Consensus 508 l~~~g~~~~~I~~~GGga-~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G----~~~s~~ea~~~~~~~-~~ 581 (621)
|++.|.++++|+++||++ ||++|+||+|||+|+||+++...|++|+|||++|++++| .|+|++|+.+.+... .+
T Consensus 433 l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~e~~~~~~~~~~~ 512 (572)
T 3jvp_A 433 FHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMFASVAAGSEVGGYDSIEEAAKKMGRVKDE 512 (572)
T ss_dssp HHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHHHHHHCSSSSSCSCHHHHHHHHCCBCSC
T ss_pred HHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCCCccHHHHHHHHHHHhcCCCccccCCHHHHHHHhhccCCe
Confidence 998888999999999999 999999999999999999999999999999999999999 999999998888754 57
Q ss_pred EEcCCCChhhHHHHHHHHHHHHHHHHHHH
Q 007010 582 VIHPSKDPKVKKYHDAKYLIFRELFEQQV 610 (621)
Q Consensus 582 ~~~P~~~~~~~~~y~~~y~~y~~l~~~~~ 610 (621)
+|+| ++++++.|+++|++|+++|++++
T Consensus 513 ~~~P--~~~~~~~Y~~~y~~y~~l~~~l~ 539 (572)
T 3jvp_A 513 TFKP--IPEHVAIYEKLYQEYVTLHDYFG 539 (572)
T ss_dssp CBCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEee--CHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999 99999999999999999999986
No 6
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.7e-89 Score=757.24 Aligned_cols=479 Identities=19% Similarity=0.315 Sum_probs=413.3
Q ss_pred CCCCCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 51 ~m~~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~-~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
+|+++|+||||+|||++|++++|.+|+++.+.+.+++.. +.+||+||||++||+++++++++++++.++++.+|.+|||
T Consensus 22 ~MM~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igi 101 (520)
T 4e1j_A 22 SMMGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITANDIAAIGI 101 (520)
T ss_dssp CCCSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEE
T ss_pred HHhhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 466689999999999999999999999999999999865 4899999999999999999999999887777789999999
Q ss_pred cCC-CceEEec-CCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcch
Q 007010 130 AAT-CSLVAVD-ADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQE 205 (621)
Q Consensus 130 s~~-~~~v~vD-~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe 205 (621)
++| +++|+|| ++|+|+ +|+|+|+|.|+.++++++++.. +.++++||+++++.++++||+|+++|+||
T Consensus 102 s~~g~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe 172 (520)
T 4e1j_A 102 TNQRETVVVWDRETGKPI---------HNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVKG 172 (520)
T ss_dssp EECSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSSCSSTTSHHHHHHHHHHHSTT
T ss_pred eCCcceEEEEECCCCeEC---------ccccccccCCHHHHHHHHHhcccHHHHHHHHCCCCCchhHHHHHHHHHHcChH
Confidence 998 9999999 589999 8999999999999999998875 57999999999999999999999999999
Q ss_pred hHHhhcc----eecchhHHhhhhcccc-ccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCcccccc
Q 007010 206 SWSMVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGH 280 (621)
Q Consensus 206 ~~~~~~~----~l~~~dyl~~~LTG~~-~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~ 280 (621)
+|+|+++ |++++|||.|+|||+. ..++.|+ +|+|++||+++++||+++|+.+||++.+
T Consensus 173 ~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~--- 235 (520)
T 4e1j_A 173 AQVRAAKGELCFGTIDTFLIWRLTGGECFCTDATN--------------ASRTLLYNIAENAWDDELTEVLRVPKEM--- 235 (520)
T ss_dssp HHHHHHTTCEEEEEHHHHHHHHHTTTCCCEEEHHH--------------HTTSSSEETTTTEECHHHHHHHTCCGGG---
T ss_pred HHHHHhcCCeEecCHHHHHHHHhcCCCeeeecHHH--------------hhhhcccccccCCCCHHHHHHcCCCHHH---
Confidence 9999985 6789999999999973 2344443 5688999999999999999999999754
Q ss_pred ccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccc
Q 007010 281 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 360 (621)
Q Consensus 281 lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~ 360 (621)
|| +++++++++|. ++++ ||++|+||++|++|++|+++|+ |..+| |++++++|||+
T Consensus 236 LP----~i~~~~~~~G~-~~~~-----~l~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~ 290 (520)
T 4e1j_A 236 LP----EVKDCAADFGV-TDPS-----LFGAAIPILGVAGDQQAATIGQ-ACFKP--------------GMLKSTYGTGC 290 (520)
T ss_dssp SC----EEECSBSCCCB-CCHH-----HHTSCCBEEEECCHHHHHHHHT-TCCST--------------TCEEEEESSSE
T ss_pred CC----ceecCCCceee-eChh-----hCCCCCeEEEECCcHHHHHHhC-CCCCC--------------CcEEEEecCch
Confidence 47 68899999997 8864 5678999999999999999999 66655 58999999999
Q ss_pred eeccee-CcccccC-Ccccccccccc-CCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhh
Q 007010 361 CHMAVS-RNKLFIP-GVWGPFWSAMV-PKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMI 437 (621)
Q Consensus 361 ~~~~~~-~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 437 (621)
++.+.+ +++..++ +.+..+++... ++.|.++++++++|.+++|+++.+... ..|+++++++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~------------~~~~~l~~~a~~~- 357 (520)
T 4e1j_A 291 FALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKVI------------KAAPDTGSLAESA- 357 (520)
T ss_dssp EEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTTCCC-----------------CHHHHHTS-
T ss_pred heEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhHHHHHHHHHHHcCCc------------ccHHHHHHHHhcC-
Confidence 877766 5555443 33322322221 247999999999999999999987421 2466777776542
Q ss_pred hhcCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CC
Q 007010 438 HERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH----GH 513 (621)
Q Consensus 438 ~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~----g~ 513 (621)
++++|++|+|||.|+|+|+||+++||+|+|++.+|++.|+ +||++||+||.+|++++.|++. |
T Consensus 358 ---------~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~l~~l~~~~~~~g- 424 (520)
T 4e1j_A 358 ---------DPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEF---ARAALEAVCYQTRDLLEAMHKDWRRNG- 424 (520)
T ss_dssp ---------CTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred ---------CCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 3689999999999999999999999999999999999985 5699999999999999999875 6
Q ss_pred CcCEEEEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHH
Q 007010 514 KIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKK 593 (621)
Q Consensus 514 ~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~ 593 (621)
++++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++. ++.+..++|+| +++.++
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~~-~~~~~~~~~~P--~~~~~~ 501 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFA-KSWARDRRFEP--HMDEAT 501 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHHH-HTCCEEEEECC--CSCHHH
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHHH-hhcCCCeEECC--CCCHHH
Confidence 889999999999999999999999999999999999999999999999999999999864 66677889999 888776
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007010 594 YHDAKYLIFRELFEQQV 610 (621)
Q Consensus 594 ~y~~~y~~y~~l~~~~~ 610 (621)
|+++|++|+++|++.+
T Consensus 502 -~~~~y~~~~~~~~~~~ 517 (520)
T 4e1j_A 502 -RKVKLKGWRSAVKRTL 517 (520)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHh
Confidence 7999999999998764
No 7
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=3.9e-88 Score=750.79 Aligned_cols=479 Identities=19% Similarity=0.341 Sum_probs=418.9
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
++|+||||+|||++|++++|.+|+++.+.+.+++.+. .+||+||||++||+++++++++++++.++++.+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQ 83 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEeeCC
Confidence 4799999999999999999999999999999998654 899999999999999999999999888777789999999998
Q ss_pred -CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHH
Q 007010 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (621)
Q Consensus 133 -~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 208 (621)
+++|+||++ |+|+ +|+|+|+|+|+.++++++++.. +.++++||+++++.++++||+|+++|+||+|+
T Consensus 84 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 154 (506)
T 3h3n_X 84 RETTVVWDKTTGQPI---------ANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQE 154 (506)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCCCTTSHHHHHHHHHHHSTTHHH
T ss_pred cccEEEEeCCCCeEC---------CCceEecCcchHHHHHHHHhccCHHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 999999998 9999 8999999999999999998875 67999999999999999999999999999999
Q ss_pred hhcc----eecchhHHhhhhcccc-ccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccc
Q 007010 209 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (621)
Q Consensus 209 ~~~~----~l~~~dyl~~~LTG~~-~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~ 283 (621)
++++ |++++|||.|+|||+. ..++.|+ +|+|++||+++++||+++|+.+||++.+ ||
T Consensus 155 ~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP- 216 (506)
T 3h3n_X 155 KADNGELLFGTIDSWLVWKLTDGQVHVTDYSN--------------ASRTMLYNIHKLEWDQEILDLLNIPSSM---LP- 216 (506)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHHH--------------HHTTTSEETTTTEECHHHHHHTTCCGGG---CC-
T ss_pred HHhcCCeEEecHHHHHHHHhcCCceeeeEHHH--------------hhhhhCeecCCCCcCHHHHHHcCcCHHH---CC-
Confidence 9986 7889999999999952 2244443 5688999999999999999999999754 47
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceec
Q 007010 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (621)
Q Consensus 284 i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~ 363 (621)
+++++++++|. +++++ .+| +||||++|++|++|+++|+ |..+| |++.+++|||+++.
T Consensus 217 ---~i~~~~~~~G~-~~~~~--~lg--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 273 (506)
T 3h3n_X 217 ---EVKSNSEVYGH-TRSYR--FYG--SEVPIAGMAGDQQAALFGQ-MAFEK--------------GMIKNTYGTGAFIV 273 (506)
T ss_dssp ---EEECSEEEEEE-CCGGG--TTT--CCCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---ceecCCCccee-eChHH--hcC--CCCeEEEECCcHHHHHHhC-CCCCC--------------CcEEEEecchheee
Confidence 68899999997 99876 466 7999999999999999998 66655 58999999999876
Q ss_pred ceeC-cccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhh
Q 007010 364 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 439 (621)
Q Consensus 364 ~~~~-~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 439 (621)
+.+. ++...+ +.+..++ +..++ .|.++++++++|.+++|+++.+.. ...|+++++++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~--- 337 (506)
T 3h3n_X 274 MNTGEEPQLSDNDLLTTIG-YGINGKVYYALEGSIFVAGSAIQWLRDGLRM------------IETSPQSEELAAKA--- 337 (506)
T ss_dssp EEEETCCCSCCTTSEEEEE-EEETTEEEEEEEEEECCSSHHHHHHHHTSCC------------CSSTTHHHHHHTTC---
T ss_pred eecCCccccCCCceEEEee-eecCCCCEEEEecchhhHHHHHHHHHHHcCC------------CCcHHHHHHHHhcC---
Confidence 6554 444333 3332232 23344 699999999999999999998742 12466777766542
Q ss_pred cCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEE
Q 007010 440 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 518 (621)
Q Consensus 440 ~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~g~~~~~I 518 (621)
| + .+|++|+|||+|+|+|+||+++||+|+|++..|++.|+ +||++|||||.+|++++.|++ .|.++++|
T Consensus 338 ---~---~-~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~~~~i 407 (506)
T 3h3n_X 338 ---K---G-DNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDF---VRATLQAVAYQSKDVIDTMKKDSGIDIPLL 407 (506)
T ss_dssp ---C---S-CSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred ---C---C-CCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 2 3 48999999999999999999999999999999999986 569999999999999999987 58899999
Q ss_pred EEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHH
Q 007010 519 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAK 598 (621)
Q Consensus 519 ~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~ 598 (621)
+++||+++|++|+||+||++|+||+++...|++|+|||++|++++|.|+|++|+ .++.+..++|+| +++.+ .|+++
T Consensus 408 ~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~~~~~~P--~~~~~-~~~~~ 483 (506)
T 3h3n_X 408 KVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSMAEEGQMFTP--EMPAE-ERDNL 483 (506)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HTTCCCCCEECC--CSCHH-HHHHH
T ss_pred EEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECC--CCCHH-HHHHH
Confidence 999999999999999999999999999999999999999999999999999985 567778899999 77665 58999
Q ss_pred HHHHHHHHHHHHHH
Q 007010 599 YLIFRELFEQQVSQ 612 (621)
Q Consensus 599 y~~y~~l~~~~~~~ 612 (621)
|++|+++|++++.|
T Consensus 484 y~~~~~~~~~~~~~ 497 (506)
T 3h3n_X 484 YEGWKQAVAATQTF 497 (506)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998874
No 8
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=2.5e-88 Score=749.36 Aligned_cols=478 Identities=25% Similarity=0.358 Sum_probs=416.0
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC-C
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT-C 133 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~-~ 133 (621)
|+||||+|||++|++++|.+|+++...+.+++.+. .+||+||||++||+++++++++++++.+ ..+|.+|||++| +
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~i~~Igis~~~~ 78 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQDVKALGIAGQMH 78 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTTCCEEEEEECSS
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccceEEEEEcCCcC
Confidence 47999999999999999999999999999998665 8999999999999999999999987742 568999999998 9
Q ss_pred ceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccChhHHhhhCCCCCCCChHHHHHHHHHhcchhHHhhcce
Q 007010 134 SLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRW 213 (621)
Q Consensus 134 ~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~ 213 (621)
++|+||++|+|+ +|+|.|+|.|+.++++++++....++++||+++++.++++||+|+++|+||+|+++++|
T Consensus 79 ~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~~~~~~~ 149 (484)
T 2itm_A 79 GATLLDAQQRVL---------RPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKV 149 (484)
T ss_dssp CBEEECTTCCBC---------SCEECTTCCTTHHHHHHHHHHCTTHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCCEE
T ss_pred cEEEECCCcCCC---------cccceecccCcHHHHHHHHHhHHHHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHhhe
Confidence 999999999999 89999999999999999987655677889999999999999999999999999999999
Q ss_pred ecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCcccccCCC
Q 007010 214 MDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAFPGH 293 (621)
Q Consensus 214 l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~~v~~~g~ 293 (621)
+.++|||.|+|||+.. ++.|+ +|+|++||+++++||+++|+.+||+..+ || +++++++
T Consensus 150 l~~~d~l~~~LTG~~~-td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lp----~i~~~~~ 207 (484)
T 2itm_A 150 LLPKDYLRLRMTGEFA-SDMSD--------------AAGTMWLDVAKRDWSDVMLQACDLSRDQ---MP----ALYEGSE 207 (484)
T ss_dssp ECHHHHHHHHHHSCCE-EEHHH--------------HHTTTCEETTTTEECHHHHHTTTCCGGG---SC----EEECTTS
T ss_pred eCcHHHHHHHHhCCce-eeHHH--------------hhccccccCCCCCcCHHHHHHcCCCHHH---CC----CccCCcc
Confidence 9999999999999864 33432 5688999999999999999999999754 46 6889999
Q ss_pred ccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceecceeCcccccC
Q 007010 294 PLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIP 373 (621)
Q Consensus 294 ~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~~~~~~~ 373 (621)
++|+ +++++|+++||+ |+||++|+||++|+++|+ |..++ +++++++|||+++..+++.+..++
T Consensus 208 ~~G~-~~~~~a~~~Gl~-g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~~~~~~~~ 270 (484)
T 2itm_A 208 ITGA-LLPEVAKAWGMA-TVPVVAGGGDNAAGAVGV-GMVDA--------------NQAMLSLGTSGVYFAVSEGFLSKP 270 (484)
T ss_dssp EEEE-CCHHHHHHHTSC-CCEEECCEEHHHHHHHHH-TCCST--------------TCEEEEESSSEEEEEECSSCCCCC
T ss_pred eeec-cCHHHHHHhCCC-CCeEEEEchHHHHHHHhC-CCCCC--------------CcEEEEccchheeEEecCCCccCc
Confidence 9997 999999999999 999999999999999998 66655 579999999999988888776554
Q ss_pred Cc-cccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCCCccCCCCCe
Q 007010 374 GV-WGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDI 452 (621)
Q Consensus 374 ~~-~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl 452 (621)
.. ...+ ++..++.|+++++++++|.+++|+++.+. ...|+++++++++. |++++|+
T Consensus 271 ~~~~~~~-~~~~~g~~~~~~~~~~~G~~~~W~~~~~~-------------~~~~~~~~~~a~~~---------~~~~~gl 327 (484)
T 2itm_A 271 ESAVHSF-CHALPQRWHLMSVMLSAASCLDWAAKLTG-------------LSNVPALIAAAQQA---------DESAEPV 327 (484)
T ss_dssp SSSCEEE-ECSSTTCEEEEEEECCHHHHHHHHHHHTT-------------CCSHHHHHHHGGGC---------CTTSCCC
T ss_pred ccceEEe-ecccCCeeeeeehhhhHHHHHHHHHHhcC-------------cccHHHHHHHHhcC---------CCCCCCe
Confidence 22 1122 34467899999999999999999998763 12366666655432 3689999
Q ss_pred EEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHH
Q 007010 453 HVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQ 532 (621)
Q Consensus 453 ~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Q 532 (621)
+|+|||.|+|+|+||+++||+|+|++.+|++.|+ +||++||++|++|++++.|++.|.++++|+++||+++|++|+|
T Consensus 328 ~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Q 404 (484)
T 2itm_A 328 WFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQ 404 (484)
T ss_dssp EEEEEEC--------CCEEEEEEEEETTCCHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHH
T ss_pred EEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHH
Confidence 9999999999999999999999999999999985 5699999999999999999888888899999999999999999
Q ss_pred HHHHhhCCceeeccCCCc-hhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 007010 533 QHADIIGCPIILPRENES-VLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQVS 611 (621)
Q Consensus 533 i~Advlg~pV~~~~~~e~-~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~ 611 (621)
|+||++|+||+++...|. +|+|||++|++++|.|+|++|+.+.+ ...++|+| +++.++.|+++|++|+++|+++++
T Consensus 405 i~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~~~~~-~~~~~~~P--~~~~~~~y~~~y~~~~~~~~~~~~ 481 (484)
T 2itm_A 405 MLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQL-PLEQSHLP--DAQRYAAYQPRRETFRRLYQQLLP 481 (484)
T ss_dssp HHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHHSCCC-CEEEEECC--CHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHHHHhc-CCCeEECC--CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998885 89999999999999999999875443 45678999 999999999999999999998765
Q ss_pred H
Q 007010 612 Q 612 (621)
Q Consensus 612 ~ 612 (621)
+
T Consensus 482 ~ 482 (484)
T 2itm_A 482 L 482 (484)
T ss_dssp G
T ss_pred h
Confidence 3
No 9
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=7.4e-88 Score=748.03 Aligned_cols=479 Identities=19% Similarity=0.323 Sum_probs=418.3
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
++|+||||+|||++|++++|.+|+++.+.+.+++... .+||+||||++||+++++++++++++.+.++.+|.+|||++|
T Consensus 5 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 84 (501)
T 3g25_A 5 EKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQ 84 (501)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEEC
T ss_pred ccEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEECC
Confidence 4699999999999999999999999999999998654 899999999999999999999999987777789999999998
Q ss_pred -CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHH
Q 007010 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (621)
Q Consensus 133 -~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 208 (621)
+++++||++ |+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.++++||+|+++|+||+|+
T Consensus 85 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~ 155 (501)
T 3g25_A 85 RETTVVWDKHTGRPI---------YHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGARE 155 (501)
T ss_dssp SSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred cCcEEEEECCCCeEC---------CCceeeccCChHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 999999999 9999 8999999999999999998875 67999999999999999999999999999999
Q ss_pred hhcc----eecchhHHhhhhcccc-ccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccc
Q 007010 209 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (621)
Q Consensus 209 ~~~~----~l~~~dyl~~~LTG~~-~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~ 283 (621)
++++ |++++|||.|+|||.. ..++.|+ +|+|++||+++++||+++|+.+||++.+ ||
T Consensus 156 ~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP- 217 (501)
T 3g25_A 156 KAENGDLLFGTIDTWLVWKLSGKAAHITDYSN--------------ASRTLMFNIHDLEWDDELLELLTVPKNM---LP- 217 (501)
T ss_dssp HHHTTCEEEEEHHHHHHHHHTTTSCCEEEHHH--------------HTTSSSEETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHhcCCeEEecHHHHHHHHhcCCCeeeeeHHH--------------hhcccCeeCCCCCCCHHHHHHhCcCHHH---CC-
Confidence 9987 7889999999999942 2234443 5688999999999999999999999754 47
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceec
Q 007010 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (621)
Q Consensus 284 i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~ 363 (621)
+++++++++|. ++++. .+| +|+||++|++|++|+++|+ |..+| |++++++|||+++.
T Consensus 218 ---~i~~~~~~~G~-~~~~~--~~g--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 274 (501)
T 3g25_A 218 ---EVKASSEVYGK-TIDYH--FYG--QEVPIAGVAGDQQAALFGQ-ACFER--------------GDVKNTYGTGGFML 274 (501)
T ss_dssp ---EEECSEEEEEE-CCGGG--TTT--CCCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---ceecCCCceec-cchHH--hCC--CCCeEEEECccHHHHHHhC-CCCCC--------------CcEEEEccchhhee
Confidence 68889999997 98763 445 7999999999999999998 66655 58999999999877
Q ss_pred ceeC-cccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhh
Q 007010 364 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 439 (621)
Q Consensus 364 ~~~~-~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 439 (621)
+.+. ++...+ +.+..++ +..++ .|.++++++++|.+++|+++.+.. ...|+++++++++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~~~~~l~~~a~~~--- 338 (501)
T 3g25_A 275 MNTGDKAVKSESGLLTTIA-YGIDGKVNYALEGSIFVSGSAIQWLRDGLRM------------INSAPQSESYATRV--- 338 (501)
T ss_dssp EECTTSCCCCSSSCEEEEE-EEETTEEEEEEEEEESCSTHHHHHHHHTSCC------------CSSGGGHHHHHTTS---
T ss_pred eecCCccccCCCCeEEEee-EecCCccEEEEecccccHHHHHHHHHHHcCC------------CCcHHHHHHHHhhC---
Confidence 6664 444433 3333232 33344 799999999999999999998742 12466777766542
Q ss_pred cCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEE
Q 007010 440 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 518 (621)
Q Consensus 440 ~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~g~~~~~I 518 (621)
| + .+|++|+|||.|+|+|+||+++||+|+|++..|++.|+ +||++||+||.+|++++.|++ .|.++++|
T Consensus 339 ---~---~-~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~~~~~~~l~~~~g~~~~~i 408 (501)
T 3g25_A 339 ---D---S-TEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHF---IRATLESLCYQTRDVMEAMSKDSGIDVQSL 408 (501)
T ss_dssp ---S---C-CTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHSSCCCSEE
T ss_pred ---C---C-CCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 2 3 58999999999999999999999999999999999996 559999999999999999987 68899999
Q ss_pred EEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHH
Q 007010 519 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAK 598 (621)
Q Consensus 519 ~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~ 598 (621)
+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ +++++..++|+| +++.+ .|+++
T Consensus 409 ~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~~~~~~~~~P--~~~~~-~~~~~ 484 (501)
T 3g25_A 409 RVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKNWKLEEKFDP--KMDEG-EREKL 484 (501)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHHCCEEEEECC--CCCHH-HHHHH
T ss_pred EEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHhccCCeEECC--CCCHH-HHHHH
Confidence 999999999999999999999999999999999999999999999999999985 567777899999 77765 59999
Q ss_pred HHHHHHHHHHHHHH
Q 007010 599 YLIFRELFEQQVSQ 612 (621)
Q Consensus 599 y~~y~~l~~~~~~~ 612 (621)
|++|+++|++.+.|
T Consensus 485 y~~~~~~~~~~~~~ 498 (501)
T 3g25_A 485 YRGWKKAVEATQVF 498 (501)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999988765
No 10
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=2.5e-88 Score=752.67 Aligned_cols=480 Identities=19% Similarity=0.310 Sum_probs=418.2
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
|+|+||||+|||++|++++|.+|+++++.+.+++... .+||+||||++||+++++++++++++.++++.+|.+|||++|
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 81 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 81 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEeCC
Confidence 5799999999999999999999999999999998654 899999999999999999999999988777789999999998
Q ss_pred -CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHH
Q 007010 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (621)
Q Consensus 133 -~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 208 (621)
+++|+||++ |+|+ +|+|+|+|+|+.++++++++.. +.++++||+++++.++++||+|+++|+||+|+
T Consensus 82 ~~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 152 (510)
T 2p3r_A 82 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRE 152 (510)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred cCcEEEEECCCCeEC---------cccccccCccHHHHHHHHHhcccHHHHHHHhCCCCCcccHHHHHHHHHHcCHHHHH
Confidence 999999998 9999 8999999999999999998875 67999999999999999999999999999999
Q ss_pred hhcc----eecchhHHhhhhcccc-ccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccc
Q 007010 209 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (621)
Q Consensus 209 ~~~~----~l~~~dyl~~~LTG~~-~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~ 283 (621)
++++ |++++|||.|+|||.. ..++.| ++|+|++||+++++||+++|+.+||++.+ ||
T Consensus 153 ~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s--------------~As~t~l~d~~~~~W~~~ll~~~gi~~~~---LP- 214 (510)
T 2p3r_A 153 RARRGELLFGTVDTWLIWKMTQGRVHVTDYT--------------NASRTMLFNIHTLDWDDKMLEVLDIPREM---LP- 214 (510)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHH--------------HHHTTSSEETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHhcCCeEecCHHHHHHHHhcCCCeEEeehh--------------HhhhhccccCccCCCCHHHHHHhCCCHHH---CC-
Confidence 9988 7789999999999942 223444 35688999999999999999999999754 47
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceec
Q 007010 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (621)
Q Consensus 284 i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~ 363 (621)
+++++++++|. +++ +.+| ++||||++|++|++|+++|+ |..+| |++.+++|||+++.
T Consensus 215 ---~i~~~~~~~G~-~~~---~~lG-~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 271 (510)
T 2p3r_A 215 ---EVRRSSEVYGQ-TNI---DGKG-GTRIPISGIAGDQQAALFGQ-LCVKE--------------GMAKNTYGTGCFML 271 (510)
T ss_dssp ---EEECSEEEEEE-ECT---TCTT-SCCEEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---ceecCCCceee-ech---hhcC-CCCCeEEEECchHHHHHHhc-CCCCC--------------CcEEEeecchheeE
Confidence 68889999997 875 3567 89999999999999999999 66655 58999999999765
Q ss_pred cee-CcccccC-Ccccccccccc-CCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhc
Q 007010 364 AVS-RNKLFIP-GVWGPFWSAMV-PKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 440 (621)
Q Consensus 364 ~~~-~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 440 (621)
+.+ +++..++ +.+..+++... ++.|.++++++++|.+++|+++.+... ..|+++++++++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~------------~~~~~l~~~a~~~---- 335 (510)
T 2p3r_A 272 MNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLI------------NDAYDSEYFATKV---- 335 (510)
T ss_dssp EECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCC------------CSSSCHHHHHTTS----
T ss_pred EecCCccccCCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHccCC------------CcHHHHHHHHhhC----
Confidence 555 4554443 33322322221 358999999999999999999987421 2355677666542
Q ss_pred CCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcCEEE
Q 007010 441 NSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH-GHKIDTLL 519 (621)
Q Consensus 441 ~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~-g~~~~~I~ 519 (621)
++++|++|+|||.|+|+|+||+++||+|+|++.+|++.|+ +||++||+||.+|++++.|++. |.++++|+
T Consensus 336 ------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~ 406 (510)
T 2p3r_A 336 ------QNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHI---IRATLESIAYQTRDVLEAMQADSGIRLHALR 406 (510)
T ss_dssp ------SSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred ------CCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCccEEE
Confidence 2689999999999999999999999999999999999996 5699999999999999999875 88999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHH
Q 007010 520 ACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKY 599 (621)
Q Consensus 520 ~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y 599 (621)
++||++||++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++ +++++..++|+| +++ ++.|+++|
T Consensus 407 ~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~~~~~~~P--~~~-~~~~~~~y 482 (510)
T 2p3r_A 407 VDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAVIEREFRP--GIE-TTERNYRY 482 (510)
T ss_dssp EESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TTCCCEEEEECC--CSC-HHHHHHHH
T ss_pred EeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECC--CCC-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999884 566677889999 764 67899999
Q ss_pred HHHHHHHHHHHHH
Q 007010 600 LIFRELFEQQVSQ 612 (621)
Q Consensus 600 ~~y~~l~~~~~~~ 612 (621)
++|+++|++++.|
T Consensus 483 ~~~~~~~~~~~~~ 495 (510)
T 2p3r_A 483 AGWKKAVKRAMAW 495 (510)
T ss_dssp HHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhhh
Confidence 9999999998764
No 11
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.8e-87 Score=744.54 Aligned_cols=484 Identities=22% Similarity=0.329 Sum_probs=426.3
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
|+|+||||+|||++|++++|.+|+++.+.+.+++... .+||.||||++||+++++++++++++.++++.+|.+||||+|
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis~~ 81 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQ 81 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEecC
Confidence 4689999999999999999999999999999998654 899999999999999999999999887777788999999998
Q ss_pred -CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC-hhHHhhhCCCCCCCChHHHHHHHHHhcchhHHhh
Q 007010 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN-SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMV 210 (621)
Q Consensus 133 -~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~-~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~ 210 (621)
+++|+||++|+|+ +|+|.|+|.|+.++++++.+.. ++++++||.++++.++++||+|+++|+||+|+++
T Consensus 82 ~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~ 152 (497)
T 2zf5_O 82 RETTLVWDKDGKPL---------YNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKA 152 (497)
T ss_dssp SSCEEEECTTCCBS---------SCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHH
T ss_pred CCcEEEECCCCCCc---------ccceeecccCcHHHHHHHHhhhHHHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHH
Confidence 9999999999999 8999999999999999987653 5689999999999999999999999999999999
Q ss_pred cc----eecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCc
Q 007010 211 FR----WMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGR 286 (621)
Q Consensus 211 ~~----~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~ 286 (621)
++ |++++|||.|+|||+.. ++.| ++|+|++||+++++||+++|+.+||+..+ ||
T Consensus 153 ~~~~~~~~~~~d~l~~~LTG~~~-td~s--------------~As~t~l~d~~~~~W~~~ll~~~gi~~~~---lP---- 210 (497)
T 2zf5_O 153 EKGEVMFGTVDTFLIYRLTGEHV-TDYS--------------NASRTMLFNIKKLDWDDELLELFDIPESV---LP---- 210 (497)
T ss_dssp HTTCCEEEEHHHHHHHHHHSCCE-EEHH--------------HHTTSSSEETTTTEECHHHHHHTTCCGGG---CC----
T ss_pred hcCCCEEEcHHHHHHHHHhCCee-eeHH--------------HhhhhcCccCCCCCcCHHHHHHcCcCHHH---CC----
Confidence 88 89999999999999764 3343 25688999999999999999999999754 46
Q ss_pred ccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceeccee
Q 007010 287 SVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVS 366 (621)
Q Consensus 287 ~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~ 366 (621)
+++++++++|. ++++ .+| +|+||++|++|++|+++|+ |..+| +++++++|||+++.+.+
T Consensus 211 ~i~~~~~~~G~-~~~~---~~g--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~~~~ 269 (497)
T 2zf5_O 211 EVRESSEVYGY-TKKE---LLG--AEIPVSGDAGDQQAALFGQ-AAFEA--------------GMVKATYGTGSFILVNT 269 (497)
T ss_dssp EEECSEEEEEE-CCHH---HHS--SCCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEEEEE
T ss_pred CcCCCCCeeee-cCHH---HcC--CCCeEEEEccHHHHHHHhC-CCCCC--------------CcEEEEcchhheeeEEC
Confidence 68889999997 9987 588 8999999999999999998 66655 57999999999998888
Q ss_pred CcccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCC
Q 007010 367 RNKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSP 443 (621)
Q Consensus 367 ~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p 443 (621)
+++..++ +.+..++ +..++ .|+++++++++|.+++|+++.+.. ...|+++++++++.
T Consensus 270 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~G~~~~w~~~~~~~------------~~~~~~l~~~a~~~------- 329 (497)
T 2zf5_O 270 DKMVLYSDNLLTTIA-WGLNGRVSYALEGSIFVTGAAVQWLRDGIKI------------IKHASETEELATKL------- 329 (497)
T ss_dssp ETCCCCCTTSEEEEE-EEETTEEEEEEEEEESCSHHHHHHHHHTSCC------------CSCGGGHHHHHTTS-------
T ss_pred CCCccCCCCcEEEEE-EEcCCCCEEEEechhhhHHHHHHHHHHHhCC------------CCcHHHHHHHHhhC-------
Confidence 8876544 3322232 33343 799999999999999999997642 12356676655432
Q ss_pred CccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC
Q 007010 444 FVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG 523 (621)
Q Consensus 444 ~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GG 523 (621)
++++|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||.+|++++.|++.+ ++++|+++||
T Consensus 330 ---~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG 402 (497)
T 2zf5_O 330 ---ESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGG 402 (497)
T ss_dssp ---SSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESG
T ss_pred ---CCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCc
Confidence 25889999999999999999999999999999999999964 5999999999999999998877 8899999999
Q ss_pred CCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHHHHH
Q 007010 524 LAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFR 603 (621)
Q Consensus 524 ga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~ 603 (621)
+++|++|+||+||++|+||+++...|++|+|||++|++++|.|++++++ .++....++|+| +++. +.|+++|++|+
T Consensus 403 ~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~-~~~~~~~~~~~P--~~~~-~~y~~~y~~~~ 478 (497)
T 2zf5_O 403 ATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREI-AELWKAERIFEP--KMDE-KTRERLYKGWK 478 (497)
T ss_dssp GGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHH-HTTCCEEEEECC--CCCH-HHHHHHHHHHH
T ss_pred cccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHH-HHhcCCCeEECC--CccH-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 466666789999 8887 89999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 007010 604 ELFEQQVSQRSIMAQAL 620 (621)
Q Consensus 604 ~l~~~~~~~~~~~~~~~ 620 (621)
++|++++.|+++|+.++
T Consensus 479 ~~~~~~~~~~~~~~~~~ 495 (497)
T 2zf5_O 479 EAVKRAMGWAKVVDSAK 495 (497)
T ss_dssp HHHHTTTTGGGTCCCC-
T ss_pred HHHHHHHhHhhhhhhhc
Confidence 99999999988887765
No 12
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=8e-88 Score=751.66 Aligned_cols=478 Identities=19% Similarity=0.309 Sum_probs=411.1
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
++|+||||+||||+|++|||.+|+++++.+.+++.+. .+||+||||++||+++++++++++++.++++.+|++||||+|
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis~q 82 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 82 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred ceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhEEEEEEeCC
Confidence 4799999999999999999999999999999998765 999999999999999999999999999888999999999998
Q ss_pred -CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHH
Q 007010 133 -CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWS 208 (621)
Q Consensus 133 -~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 208 (621)
+++|+||++ |+|| +|+|+|+|+|+.++++++.+.. +.++++||+++++.++++||+|+++|+|++|+
T Consensus 83 ~~~~v~~D~~~G~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~ 153 (526)
T 3ezw_A 83 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRE 153 (526)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred CCCEEEEECCCCeEc---------ccceecCCcchHHHHHHHHhhccHHHHHHHhCCCCCcccHHHHHHHHHHcCchHHH
Confidence 999999985 9999 8999999999999999998875 56899999999999999999999999999999
Q ss_pred hhcc----eecchhHHhhhhcccc-ccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccc
Q 007010 209 MVFR----WMDLSDWLSYRATGDD-TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (621)
Q Consensus 209 ~~~~----~l~~~dyl~~~LTG~~-~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~ 283 (621)
++++ +..+++||.|+|||.. ..++.| .+|+|++||+++++||+++++.+||+..+ ||
T Consensus 154 ~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s--------------~As~t~l~d~~~~~w~~~ll~~~gi~~~~---LP- 215 (526)
T 3ezw_A 154 RARRGELLFGTVDTWLIWKMTQGRVHVTDYT--------------NASRTMLFNIHTLDWDDKMLEVLDIPREM---LP- 215 (526)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHH--------------HHTTSSSEETTTTEECHHHHHHHTCCGGG---CC-
T ss_pred HHHHhhhhccchhHHHhhhhcCCCceEEEch--------------hhccccCcCccccCcCHHHHHHcCCCHHH---CC-
Confidence 9987 5667889999999753 234444 36788999999999999999999999864 47
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceec
Q 007010 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (621)
Q Consensus 284 i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~ 363 (621)
+++++++++|. ++++++ +..|+||++|++|++|+++|+ |..++ |++.+++|||+++.
T Consensus 216 ---~i~~~~~~~G~-~~~~~~----~~~gipV~~g~gD~~aa~~G~-g~~~~--------------g~~~~s~GTs~~~~ 272 (526)
T 3ezw_A 216 ---EVRRSSEVYGQ-TNIDGK----GGTRIPISGIAGDQQAALFGQ-LCVKE--------------GMAKNTYGTGCFML 272 (526)
T ss_dssp ---EEECSEEEEEE-ECTTCT----TSCCEEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---CccccccccCc-cchhhh----cCCCCcEEEEcchHHHHhhhc-ccccc--------------ceeEEEeccCeeEe
Confidence 68889999997 887654 445789999999999999998 66665 58999999999988
Q ss_pred ceeCcccccCC--cccc-ccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhc
Q 007010 364 AVSRNKLFIPG--VWGP-FWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 440 (621)
Q Consensus 364 ~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 440 (621)
+.++++...+. .... .+....++.|.++++++++|.+++||++.+..... . .+. +.++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~~-----------~-~~~-~~~~~~---- 335 (526)
T 3ezw_A 273 MNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLIND-----------A-YDS-EYFATK---- 335 (526)
T ss_dssp EECTTSCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSCCCCS-----------S-SCH-HHHHTT----
T ss_pred cccCCccccccccceeeeeeccCCcceeeeHHHHHHHHHHHHHHHHHhccccc-----------h-hHH-HHHHhc----
Confidence 88877655442 2211 11223345799999999999999999998753210 0 011 112221
Q ss_pred CCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEEE
Q 007010 441 NSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTLL 519 (621)
Q Consensus 441 ~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~g~~~~~I~ 519 (621)
+++++|++|+|||+|+|+|+||+++||+|+||+..|++.|+ +||++|||||.+|++++.|++ .|.++++|+
T Consensus 336 -----~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i---~RAvlEgia~~~r~~le~l~~~~g~~~~~i~ 407 (526)
T 3ezw_A 336 -----VQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHI---IRATLESIAYQTRDVLEAMQADSGIRLHALR 407 (526)
T ss_dssp -----SSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred -----cCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 25899999999999999999999999999999999999995 569999999999999999986 689999999
Q ss_pred EecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHH
Q 007010 520 ACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKY 599 (621)
Q Consensus 520 ~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y 599 (621)
++||++||++|+||+|||||+||+++...|++|+|||++|++|+|.|+|++|+. +.....++|+| +++.++ |+++|
T Consensus 408 v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~~-~~~~~~~~~~P--~~~~~~-~~~~y 483 (526)
T 3ezw_A 408 VDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQ-EKAVIEREFRP--GIETTE-RNYRY 483 (526)
T ss_dssp EESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGST-TCCCEEEEECC--CSCHHH-HHHHH
T ss_pred EECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHHH-HhcCCCeEEcC--CCCHHH-HHHHH
Confidence 999999999999999999999999999999999999999999999999998864 44456789999 888776 55789
Q ss_pred HHHHHHHHHHH
Q 007010 600 LIFRELFEQQV 610 (621)
Q Consensus 600 ~~y~~l~~~~~ 610 (621)
+.|++++++-+
T Consensus 484 ~~w~~av~r~~ 494 (526)
T 3ezw_A 484 AGWKKAVKRAM 494 (526)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHh
Confidence 99999987754
No 13
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=1.4e-86 Score=743.19 Aligned_cols=478 Identities=15% Similarity=0.099 Sum_probs=412.7
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-----CCCc-------cccCHHH-HHHHHHHHHHHHHHHcCCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-----EGDC-------IEQSSTD-IWHAICAAVDSACSLANVD 120 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-----~~g~-------~eqd~~~-~~~~~~~~l~~~~~~~~~~ 120 (621)
|+|+||||+|||++|++|||.+|+++++.+.+|+.+. .+|| .||||++ ||+++..++ +.+.+.+++
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~-~~l~~~~~~ 87 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIIL-EKMKASGFD 87 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHH-HHHHHTTCC
T ss_pred CCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHH-HHHHHcCCC
Confidence 3699999999999999999999999999999986432 2555 5788975 555555554 555666777
Q ss_pred CCCEEEEEEcCC-CceEEecCCCC--------------------ceeecCCCCCCcceeEEcCcchHHHHHHHHccC---
Q 007010 121 GEEVKGVGFAAT-CSLVAVDADGS--------------------PVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--- 176 (621)
Q Consensus 121 ~~~I~aIgis~~-~~~v~vD~~G~--------------------pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--- 176 (621)
+.+|++||||+| +++|+||++|+ |+ +|+|+|+|+|+.++++++++..
T Consensus 88 ~~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~ 158 (538)
T 4bc3_A 88 FSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSI---------SDCPVWMDSSTTAQCRQLEAAVGGA 158 (538)
T ss_dssp GGGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSC---------SEEECTTCCCCHHHHHHHHHHHTSH
T ss_pred hHHeEEEEecccceeEEEECCCccccccccccccchhhhccccccc---------cCCcccccCcHHHHHHHHHHhhCcH
Confidence 889999999998 99999999964 77 8999999999999999998762
Q ss_pred hhHHhhhCCCCCCCChHHHHHHHHHhcchhHHhhcceecchhHHhhhhccccccccccccccccccccchhhcccccccc
Q 007010 177 SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFR 256 (621)
Q Consensus 177 ~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~ 256 (621)
++++++||+++++.++++||+|+++|+||+|+++++|++++|||.|+|||+...++.|+ +|+|++|
T Consensus 159 ~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~--------------As~t~l~ 224 (538)
T 4bc3_A 159 QALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSD--------------GSGMNLL 224 (538)
T ss_dssp HHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHH--------------HTTSSCE
T ss_pred HHHHHHHCCCCccccHHHHHHHHHHcCHHHHHHhheEEcHHHHHHHHHhCCCcccccch--------------hhccccc
Confidence 57899999999999999999999999999999999999999999999999875345543 5688999
Q ss_pred cCCCCCCCHHHHHHcCCC-ccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCc
Q 007010 257 DMEACGWDDEFWEEIGLG-DLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPE 335 (621)
Q Consensus 257 D~~~~~Ws~~ll~~~gi~-~~~~~~lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~ 335 (621)
|+++++||+++|+.+|++ .. .|| +++++++++|+ |++++|+++||++||||++|++|++|+++|+ + .+|
T Consensus 225 d~~~~~W~~~ll~~~gi~~~~---~LP----~i~~~~~~~G~-l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-~-~~~ 294 (538)
T 4bc3_A 225 QIQDKVWSQACLGACAPHLEE---KLS----PPVPSCSVVGA-ISSYYVQRYGFPPGCKVVAFTGDNPASLAGM-R-LEE 294 (538)
T ss_dssp ETTTTEECHHHHHHHCTTHHH---HHC----CCBCSSCEEEE-CCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-T-CCT
T ss_pred ccccCCCCHHHHHHhCccHHH---HCC----Ccccccccccc-cCHHHHHHhCCCCCCeEEEecccHHhhhhcc-c-cCC
Confidence 999999999999999998 53 346 68899999997 9999999999999999999999999999998 6 444
Q ss_pred cchhhhhhhhhhccceEEEEecccceecceeCcccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHH
Q 007010 336 SVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLA 415 (621)
Q Consensus 336 g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~ 415 (621)
|++++++|||+++.+.++++..++... .+++...++.|+.+++++++|.+++|+++.+.
T Consensus 295 --------------g~~~~s~GTs~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~------ 353 (538)
T 4bc3_A 295 --------------GDIAVSLGTSDTLFLWLQEPMPALEGH-IFCNPVDSQHYMALLCFKNGSLMREKIRNESV------ 353 (538)
T ss_dssp --------------TCEEEEESSSEEEEEEESSCCCCSSSE-EEEETTEEEEEEEEEEESSSHHHHHHHHHHHS------
T ss_pred --------------CcEEEEeccchheEEecCCCCCCCCcc-eEEeecCCCCEEEeehhhccchHHHHHHHHhc------
Confidence 589999999999999998877665432 23332334569999999999999999998763
Q ss_pred HHHhhcCCCHHHHHHHHHHhhhhhcCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEE------cCCCCCCHHHHHHH
Q 007010 416 NRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIIC------GMTLDSSEKQLALL 489 (621)
Q Consensus 416 ~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~------Gl~~~~~~~~~~~~ 489 (621)
...|++|++++++. |++++|++|+|||.|||+|+ ++|.|. |++. |++.|+
T Consensus 354 -------~~~~~~l~~~a~~~---------~~g~~gl~~lp~~~Ger~P~----~~G~~~~~~~~~g~~~-~~~~~l--- 409 (538)
T 4bc3_A 354 -------SRSWSDFSKALQST---------EMGNGGNLGFYFDVMEITPE----IIGRHRFNTENHKVAA-FPGDVE--- 409 (538)
T ss_dssp -------TTCHHHHHHHHHTS---------CTTGGGCEEEEESSCCSSSC----CCEEEEECTTSCEESC-CCHHHH---
T ss_pred -------CCCHHHHHHHHhcC---------CCCCCCeEEeecCCCCcCCC----CCceeeeccccccccC-CCHHHH---
Confidence 23588898888763 36899999999999999996 456664 2332 677774
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccc--cC
Q 007010 490 YLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKR--YS 567 (621)
Q Consensus 490 ~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~--~~ 567 (621)
+||++|||||.+|++++.|++.+.++++|+++||+++|++|+||+|||+|+||+++...|++|+|||++|++++|. |+
T Consensus 410 ~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~ 489 (538)
T 4bc3_A 410 VRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDV 489 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEecCCCCchHHHHHHHHHHHhCcccCC
Confidence 6699999999999999999877778899999999999999999999999999999999999999999999999998 89
Q ss_pred CHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 007010 568 SLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQVSQ 612 (621)
Q Consensus 568 s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~~ 612 (621)
|++|+.+.+.+..++|+| ++++++.|+++|++|+++|+++...
T Consensus 490 ~~~ea~~~~~~~~~~~~P--~~~~~~~Y~~~y~~y~~l~~~~~~~ 532 (538)
T 4bc3_A 490 PFSEVVKLAPNPRLAATP--SPGASQVYEALLPQYAKLEQRILSQ 532 (538)
T ss_dssp CHHHHHTTSCCCEEEECC--CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhhcCCCeeECC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988778778889999 9999999999999999999998765
No 14
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=3.6e-86 Score=735.12 Aligned_cols=476 Identities=18% Similarity=0.282 Sum_probs=419.0
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEEc
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLA--NVDGEEVKGVGFA 130 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~--~~~~~~I~aIgis 130 (621)
|+|+||||+|||++|++++|.+|+++.+.+.+++... .+||.||||++||+++++++++++++. +++..+|.+|||+
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis 82 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGIT 82 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred ccEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEc
Confidence 3689999999999999999999999999999998654 899999999999999999999998875 5556789999999
Q ss_pred CC-CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchh
Q 007010 131 AT-CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQES 206 (621)
Q Consensus 131 ~~-~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~ 206 (621)
+| +++++||++ |+|+ +|+|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+||+
T Consensus 83 ~~~~~~~~~D~~~G~~l---------~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~ 153 (503)
T 2w40_A 83 NQRETVIIWDRITGKPL---------YNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEI 153 (503)
T ss_dssp ECSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHHSCHHHHHHHHSSCCCSSSHHHHHHHHHHHCHHH
T ss_pred CCcceEEEEECCCCcCC---------ccceeecccCcHHHHHHHHhccchHHHHHHhCCCCCcccHHHHHHHHHHhChHH
Confidence 98 999999998 9999 8999999999999999998764 578999999999999999999999999999
Q ss_pred HHhhcc----eecchhHHhhhhccc-cccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCC-cccccc
Q 007010 207 WSMVFR----WMDLSDWLSYRATGD-DTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLG-DLIDGH 280 (621)
Q Consensus 207 ~~~~~~----~l~~~dyl~~~LTG~-~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~-~~~~~~ 280 (621)
|+++++ |++++|||.|+|||+ .. ++.|+ +|+|++||+++++||+++|+.+||+ +.+
T Consensus 154 ~~~~~~~~~~~~~~~d~l~~~LTG~~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~~--- 215 (503)
T 2w40_A 154 KQKIDDGTAVIGNINTWLIFNLTKGNCY-TDVTN--------------ASRTLLMDINTLQWDEKMCKIFNITNMSV--- 215 (503)
T ss_dssp HHHHHTTCEEEEEHHHHHHHHHHTSCCE-EEHHH--------------HTTTTCBCTTTCSBCHHHHHHTTCCCGGG---
T ss_pred HHHHhcCCeEEECHHHHHHHHHcCCCcc-ccHHH--------------hhhhcCccCCCCccCHHHHHHcCCChHHH---
Confidence 999998 999999999999995 43 34443 5688999999999999999999999 754
Q ss_pred ccccCcccccCCCccCCCccHHHHHHcCCCC--CCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecc
Q 007010 281 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVP--GTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGT 358 (621)
Q Consensus 281 lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~--g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GT 358 (621)
|| +++++++++|. ++++ .+| + |+||++|++|++|+++|+ |..+| +++++++||
T Consensus 216 lP----~i~~~~~~~G~-~~~~---~~g--~~~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GT 270 (503)
T 2w40_A 216 LP----EIKSNCSNFGL-VKSE---HVP--DYLNIPITGCIGDQQSACIGQ-AIFDE--------------GEAKCTYGT 270 (503)
T ss_dssp SC----EEECSEEEEEE-CCCT---TSG--GGTTCEEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESS
T ss_pred CC----CccCCcCceee-ccHH---HcC--CCCCceEEEECchHHHHHHhC-CCCCC--------------CcEEEEech
Confidence 46 68889999997 9876 577 7 999999999999999998 66655 589999999
Q ss_pred cceecceeC-cccccC-CccccccccccCC----eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHH
Q 007010 359 STCHMAVSR-NKLFIP-GVWGPFWSAMVPK----FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGT 432 (621)
Q Consensus 359 s~~~~~~~~-~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 432 (621)
|+++...++ ++..++ +.+..+ ++..++ .|+++++++++|.+++||++ ++.. ..|++|+++
T Consensus 271 s~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~~------------~~~~~l~~~ 336 (503)
T 2w40_A 271 GVFLLINTGEKVVYSTCGLITTI-CYKFNDNDKPKYALEGSIGTAGSGVSWLLK-NKLI------------DDPSEASDI 336 (503)
T ss_dssp SEEEEEECTTSCCCCSSSCEEEE-EECCSTTSCCEEEEEEEESCSHHHHHHHHH-TTSS------------SCGGGHHHH
T ss_pred hheeeeecCCccccCCCCceeEE-EeecCCCCCceEEEechhhhhHhHHHHHHH-hCCc------------CCHHHHHHH
Confidence 999988886 465544 232223 233444 89999999999999999999 7421 236677777
Q ss_pred HHhhhhhcCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C
Q 007010 433 LESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-H 511 (621)
Q Consensus 433 ~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~ 511 (621)
+++. ++++|++|+|||.|+|+|+||+++||+|+|++..|++.|+ +||++||+||++|++++.|++ .
T Consensus 337 a~~~----------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~~ 403 (503)
T 2w40_A 337 MEKC----------ENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHI---VRALLEGIAFQLNEIVDSLTSDM 403 (503)
T ss_dssp HHHC----------CSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhC----------CCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhc
Confidence 7653 2589999999999999999999999999999999999996 559999999999999999976 5
Q ss_pred CCCc-CEEEEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChh
Q 007010 512 GHKI-DTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPK 590 (621)
Q Consensus 512 g~~~-~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~ 590 (621)
|.++ ++|+++||+++|++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++.+.+.+..++|+| +++
T Consensus 404 g~~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~~~~~~~~P--~~~ 481 (503)
T 2w40_A 404 GIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRRSDAVFHS--KMD 481 (503)
T ss_dssp TCSCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHTCEEEEECC--CSC
T ss_pred CCCccceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhccCCCcEEcc--CCC
Confidence 7788 8999999999999999999999999999999999999999999999999999999987776777789999 888
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 007010 591 VKKYHDAKYLIFRELFEQQVS 611 (621)
Q Consensus 591 ~~~~y~~~y~~y~~l~~~~~~ 611 (621)
. +.|+++|++|+++|++.+.
T Consensus 482 ~-~~y~~~y~~~~~~~~~~~~ 501 (503)
T 2w40_A 482 D-KKRKKKTSEWNKAVERTLI 501 (503)
T ss_dssp H-HHHHHHHHHHHHHHHHHHC
T ss_pred H-HHHHHHHHHHHHHHHHHhh
Confidence 8 9999999999999987653
No 15
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=9.4e-86 Score=731.67 Aligned_cols=478 Identities=20% Similarity=0.330 Sum_probs=419.7
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC-
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~- 132 (621)
+|+||||+|||++|++++|.+|+++.+.+.+++... .+||.||||++||+++++++++++++.++++.+|.+|||++|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~g 81 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQR 81 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECS
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEeCCC
Confidence 489999999999999999999999999999998654 899999999999999999999999887766678999999998
Q ss_pred CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHHh
Q 007010 133 CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (621)
Q Consensus 133 ~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 209 (621)
+++|+||++ |+|+ +|+|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+||+|++
T Consensus 82 ~~~v~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 152 (504)
T 2d4w_A 82 ETAVVWDKTTGKPV---------YNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREK 152 (504)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHCSSCGGGGHHHHSCCSCTTSHHHHHHHHHHHSTTHHHH
T ss_pred CeEEEEECCCCCCc---------cccceecccChHHHHHHHHhhcchHHHHHHhCCCCCchhHHHHHHHHHHcChhHHHH
Confidence 999999998 9999 8999999999999999998743 578999999999999999999999999999999
Q ss_pred hcc----eecchhHHhhhhcc--c---cccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCcccccc
Q 007010 210 VFR----WMDLSDWLSYRATG--D---DTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGH 280 (621)
Q Consensus 210 ~~~----~l~~~dyl~~~LTG--~---~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~ 280 (621)
+++ |++++|||.|+||| + .. ++.|+ +|+|++||+++++||+++|+.+||++.+
T Consensus 153 ~~~~~~~~~~~~d~l~~~LTG~~~~~~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~--- 214 (504)
T 2d4w_A 153 AEKGDLLFGNTDTWVLWNMTGGTEGGVHV-TDVTN--------------ASRTMLMDLDTLSWREDIAADMGIPLSM--- 214 (504)
T ss_dssp HHHTCEEEECHHHHHHHHHTTTTTTCCCE-EEHHH--------------HTTTTCEETTTTEECHHHHHHTTCCGGG---
T ss_pred HhcCCeEEecHHHHHHHHhcCCCcCCcee-eehhh--------------hhhhcCccCCCCccCHHHHHHhCCCHHH---
Confidence 998 99999999999999 4 33 34443 5688999999999999999999999754
Q ss_pred ccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccc
Q 007010 281 HAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTST 360 (621)
Q Consensus 281 lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~ 360 (621)
|| +++++++++|. ++++ +.+| + +||++|++|++|+++|+ |..++ +++++++|||+
T Consensus 215 lP----~i~~~~~~~G~-~~~~--~~~G--~-~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~ 269 (504)
T 2d4w_A 215 LP----DIRSSSEVYGH-GRPR--GLVP--G-VPIAGILGDQQAATFGQ-ACFEV--------------GQAKNTYGTGN 269 (504)
T ss_dssp SC----EEECSEEEEEE-CCTT--SSST--T-CEEEEEEEHHHHHHHHT-TCCST--------------TEEEEEESSSE
T ss_pred CC----CccCCccceec-cchH--HhCC--C-CeEEEECCcHHHHHhhC-CCCCC--------------CcEEEEcchhh
Confidence 46 68899999997 9875 3577 6 99999999999999998 66655 58999999999
Q ss_pred eecceeC-cccccC-CccccccccccCC---eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHh
Q 007010 361 CHMAVSR-NKLFIP-GVWGPFWSAMVPK---FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLES 435 (621)
Q Consensus 361 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 435 (621)
++.+.++ ++..++ +.+..+ ++..++ .|+++++++++|.+++|+++.+... ..|++|++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~------------~~~~~l~~~a~~ 336 (504)
T 2d4w_A 270 FLLLNTGTEKVMSKNGLLTTV-CYKIGDAPAVYALEGSIAVTGSLVQWLRDNLGMF------------EDAPDVEWLAGK 336 (504)
T ss_dssp EEEEECTTSCCCCSSSCEEEE-EECCTTSCCEEEEEEEESCSHHHHHHHHHTTCTT------------TTCSCTHHHHTT
T ss_pred eeeeecCCccccCCCCcEEEE-EEEcCCCCceEEEcchhhhHHHHHHHHHHHhCCC------------CCHHHHHHHHhh
Confidence 9988885 465554 333223 233445 8999999999999999999976421 235566666654
Q ss_pred hhhhcCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC
Q 007010 436 MIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHK 514 (621)
Q Consensus 436 ~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~g~~ 514 (621)
. ++++|++|+|||.|+|+|+||+++||+|+|++..|++.|+ +||++||+||.+|++++.|++ .|.+
T Consensus 337 ~----------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~~g~~ 403 (504)
T 2d4w_A 337 V----------QDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHI---ARAALEATAFQSREVVDAMNADSGVD 403 (504)
T ss_dssp S----------SSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred C----------CCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 2588999999999999999999999999999999999996 459999999999999999976 5788
Q ss_pred cCEEEEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHH
Q 007010 515 IDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKY 594 (621)
Q Consensus 515 ~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~ 594 (621)
+++|+++||+++|++|+||+||++|+||+++...|++|+|||++|++++|.|+|++++. ++....++|+| +++. +.
T Consensus 404 ~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~-~~~~~~~~~~P--~~~~-~~ 479 (504)
T 2d4w_A 404 LTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVI-DNWAEDKRWSP--SMES-GE 479 (504)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHHH-HHCCEEEEECC--CSCH-HH
T ss_pred cceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHHH-hhcCCCeEEcc--CCCH-HH
Confidence 89999999999999999999999999999999999999999999999999999999974 66667789999 8887 89
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007010 595 HDAKYLIFRELFEQQVSQRS 614 (621)
Q Consensus 595 y~~~y~~y~~l~~~~~~~~~ 614 (621)
|+++|++|+++|++++.|.+
T Consensus 480 y~~~y~~~~~~~~~~~~~~~ 499 (504)
T 2d4w_A 480 RERLYRNWKKAVTKTMEWVD 499 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccch
Confidence 99999999999999998743
No 16
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=3.7e-85 Score=725.59 Aligned_cols=474 Identities=24% Similarity=0.356 Sum_probs=415.9
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccc-cCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC-
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIW-KEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~-~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~- 132 (621)
+|+||||+|||++|++++|.+|+++.+.+.+++.. +.+||.||||++||+++++++++++++.++++.+|.+|||++|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~~ 81 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITNQR 81 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEECS
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCCC
Confidence 58999999999999999999999999999999865 4899999999999999999999999887766778999999998
Q ss_pred CceEEecCC-CCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhcchhHHh
Q 007010 133 CSLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENLQESWSM 209 (621)
Q Consensus 133 ~~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 209 (621)
+++++||++ |+|+ +|+|.|+|.|+.++++++.+.. +.++++||.++++.++++||+|+++|+||+|++
T Consensus 82 ~~~~~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 152 (495)
T 2dpn_A 82 ETTLLWDRKTGKPL---------HNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKAR 152 (495)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSCTTSHHHHHHHHHHHSSSHHHH
T ss_pred ccEEEEECCCCcCC---------ccceeecccChHHHHHHHHhccchhHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHH
Confidence 999999998 9999 8999999999999999998764 578999999999999999999999999999999
Q ss_pred hcc----eecchhHHhhhhcc--ccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccc
Q 007010 210 VFR----WMDLSDWLSYRATG--DDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (621)
Q Consensus 210 ~~~----~l~~~dyl~~~LTG--~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~ 283 (621)
+++ |++++|||.|+||| +.. ++.|+ +|+|++||+++++||+++|+.+||++.+ ||
T Consensus 153 ~~~~~~~~~~~~d~l~~~LTG~~~~~-~d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lP- 213 (495)
T 2dpn_A 153 AEGGGVAFGTVDTWLIWNLTGGKVHA-TDPTN--------------ASRTLLFNLHTLAWDPELLEALGIPAAL---LP- 213 (495)
T ss_dssp HHHTCEEEECHHHHHHHHHTTTSCCE-ECHHH--------------HTTSSSEETTTTEECHHHHHHTTCCSTT---CC-
T ss_pred HhcCCcEEECHHHHHHHHhcCCCeEE-EehHH--------------hHhhcCccCccCCcCHHHHHHcCCCHHH---CC-
Confidence 988 99999999999999 443 34443 5688999999999999999999999754 46
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcccccccCccchhhhhhhhhhccceEEEEecccceec
Q 007010 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCHM 363 (621)
Q Consensus 284 i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~ 363 (621)
+++++++++|. ++++ .+| +|+||++|++|++|+++|+ |..+| +++++++|||+++.
T Consensus 214 ---~i~~~~~~~G~-~~~~---~~G--~g~pV~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~~ 269 (495)
T 2dpn_A 214 ---EVRPSDGDFGE-TLPE---LLG--APVPIRGVLGDQQAALFGQ-AALGG--------------GEGKCTYGTGAFLL 269 (495)
T ss_dssp ---EECCTTSCCCB-CCHH---HHS--SCCBEEEEEEHHHHHHHHT-TCCST--------------TCEEEEESSSEEEE
T ss_pred ---CccCCCCeeEe-ccHH---HcC--CCCeEEEECcHHHHHHHhC-CCCCC--------------CcEEEEccHhhhhh
Confidence 68889999997 9987 588 8999999999999999998 66655 58999999999998
Q ss_pred ceeC-cccccC-CccccccccccCC--eeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhh
Q 007010 364 AVSR-NKLFIP-GVWGPFWSAMVPK--FWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHE 439 (621)
Q Consensus 364 ~~~~-~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 439 (621)
+.++ ++..++ +.+..++ +..++ .|.++++++++|.+++|+++ ++.. +.|+++++++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~g~~~~w~~~-~~~~------------~~~~~l~~~a~~~--- 332 (495)
T 2dpn_A 270 LNTGKRPVLSEKGLLATVA-WSLGGRATYALEGSLFVAGAAVGWLKE-VGLI------------RESAEVEALAASV--- 332 (495)
T ss_dssp EECTTSCCCCSSSCEEEEE-EEETTEEEEEEEEEESCSHHHHHHHHH-TTSS------------SSTTTHHHHHHTC---
T ss_pred hhcCCccccCCCCceEEEE-EEcCCCCEEEEechHHhHHHHHHHHHH-cCCc------------cCHHHHHHHHhhC---
Confidence 8885 455444 2222222 33344 79999999999999999999 6421 2356777766542
Q ss_pred cCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCEE
Q 007010 440 RNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HGHKIDTL 518 (621)
Q Consensus 440 ~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~g~~~~~I 518 (621)
++++|++|+|||.|+|+|+||+++||+|+|++..|++.|++ ||++||+||.+|++++.|++ .|.++++|
T Consensus 333 -------~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~---rAvlEgia~~~~~~~~~l~~~~g~~~~~i 402 (495)
T 2dpn_A 333 -------EDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLA---RAALEGVAFQVRDVVLAMEEEAGVRLKVL 402 (495)
T ss_dssp -------SCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHH---HHHHHHHHHHHHHHHHHHHTTTSCCCCCE
T ss_pred -------CCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 25889999999999999999999999999999999999964 59999999999999999987 47788999
Q ss_pred EEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHH
Q 007010 519 LACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAK 598 (621)
Q Consensus 519 ~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~ 598 (621)
+++||+++|++|+||+||++|+||+++...|++|+|||++|++++|.| |++++. ++....++|+| +++. +.|+++
T Consensus 403 ~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~~-~~~~~~~~~~P--~~~~-~~y~~~ 477 (495)
T 2dpn_A 403 KADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDVA-GRFREAERFLP--TMPE-GRREAL 477 (495)
T ss_dssp EEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHHH-HHCCEEEEECC--CSCH-HHHHHH
T ss_pred EEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHHH-HhcCCCeEEcc--CCCH-HHHHHH
Confidence 999999999999999999999999999999999999999999999999 999874 66667789999 8887 899999
Q ss_pred HHHHHHHHHHHHHH
Q 007010 599 YLIFRELFEQQVSQ 612 (621)
Q Consensus 599 y~~y~~l~~~~~~~ 612 (621)
|++|+++|++++.|
T Consensus 478 ~~~~~~~~~~~~~~ 491 (495)
T 2dpn_A 478 YRRWREAVERAKGW 491 (495)
T ss_dssp HHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999988765
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=3e-83 Score=711.42 Aligned_cols=456 Identities=20% Similarity=0.240 Sum_probs=398.1
Q ss_pred CCeEEEEecCccceeeEEEc-CCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 54 RSVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d-~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
++|+||||+|||++|++++| .+|+++.+.+.+++ ++.||||++||++++++++++ +. ..+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~-----g~~e~d~~~~~~~i~~~l~~~----~~-~~~I~~Igis~q 73 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHP-----NGTSVDPSYWWSAFQEAAEQA----GG-LDDVSALAVGGQ 73 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----SSSEECTHHHHHHHHHHHHHT----TC-STTEEEEEEEEC
T ss_pred CcEEEEEEeccccEEEEEEECCCCeEEEEEEEeCC-----CCceECHHHHHHHHHHHHHhc----CC-ccCceEEEEeCC
Confidence 46999999999999999999 89999999988874 789999999999988888654 33 578999999998
Q ss_pred -CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC------------------hhHHhhhCCCCCCCChH
Q 007010 133 -CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN------------------SPVLQYCGGAVSPEMQP 193 (621)
Q Consensus 133 -~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~------------------~~~~~~tG~~~~~~~~~ 193 (621)
+++|+||++|+|+ +|+|+|+|+|+.++++++++.. ++++++||+++++.+++
T Consensus 74 ~~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~ 144 (515)
T 3i8b_A 74 QHGMVILDNQGNVI---------RDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTL 144 (515)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHH
T ss_pred cceEEEECCCCCCc---------CCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHH
Confidence 9999999999999 8999999999999999998752 57899999999999999
Q ss_pred HHHHHHHHhcchhHHhhcceecchhHHhhhhcccc------------ccccccccccccccccchhhcccccccccCCCC
Q 007010 194 PKLLWVKENLQESWSMVFRWMDLSDWLSYRATGDD------------TRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEAC 261 (621)
Q Consensus 194 ~kl~Wl~~~~pe~~~~~~~~l~~~dyl~~~LTG~~------------~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~ 261 (621)
+||+|+++|+||+|+++.+|++++|||.|+|||+. ..++.| ++|+|++||++++
T Consensus 145 ~kl~Wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s--------------~As~t~l~d~~~~ 210 (515)
T 3i8b_A 145 TKVAWVAENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRS--------------DASGTIYYDAASN 210 (515)
T ss_dssp HHHHHHHHHCHHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHH--------------HHTTSSSEETTTT
T ss_pred HHHHHHHHcChHHHHHHheecCHHHHHHHHhcCCCcccccccccccceeecHH--------------HhhcccCeeCCcC
Confidence 99999999999999999999999999999999982 123333 3678899999999
Q ss_pred CCCHHHHHHc-CCC-----------ccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhccc
Q 007010 262 GWDDEFWEEI-GLG-----------DLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVGV 329 (621)
Q Consensus 262 ~Ws~~ll~~~-gi~-----------~~~~~~lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~ 329 (621)
+|++++|+.+ ||+ .. .|| +++++++++|. |++++|+++||++||||++|++|++|+++|+
T Consensus 211 ~W~~~ll~~~~gi~~~~~~~~~~~~~~---~LP----~i~~~~~~~G~-v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~ 282 (515)
T 3i8b_A 211 EYRRDLIAMVLEAAEGAKAAQSHAEAI---VLP----TVLGPRDAAPV-KADPAIAGKNVEGGCLLAPGGGDNAMASLGL 282 (515)
T ss_dssp EECHHHHHHHHHHHHCHHHHHHHHHHS---BCC----EEECTTCCCSS-CCCTTTTTTTSTTCCEECCCEEHHHHHHHHT
T ss_pred ccCHHHHHhhcCCCcccccccccchHH---HCC----CCcCCcCcccC-cCHHHHHHhCCCCCCeEEEECchHHHHHhhC
Confidence 9999999998 998 43 346 68899999997 9999999999999999999999999999998
Q ss_pred ccccCccchhhhhhhhhhccceEEEEecccceecceeCcccccCC-ccccccccccCCeeEEcccccchhHHHHHHHHhh
Q 007010 330 MESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRNKLFIPG-VWGPFWSAMVPKFWLTEGGQSATGALLDYIIENH 408 (621)
Q Consensus 330 ~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~ 408 (621)
| .++ +++++++|||+++..+++++..++. .+..++ +. ++.|+.+++++++|.+++|+++.+
T Consensus 283 -g-~~~--------------g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~gg~~l~w~~~~~ 344 (515)
T 3i8b_A 283 -G-MAV--------------GDVSISLGTSGVAAAISENPTYDLTGAVSGFA-DC-TGHYLPLACTINGSRILDAGRAAL 344 (515)
T ss_dssp -T-CCT--------------TEEEEEESSSEEEEECBSSCCCCTTSCSEEEE-CS-SSSEEEEEEESCSTHHHHHHHHHH
T ss_pred -C-CCC--------------CcEEEEechhhhhhcccCccccCCCCcEEeee-cC-CCCEEEeeecccHHHHHHHHHHHh
Confidence 6 655 5899999999999988888877653 333332 22 778999999999999999999875
Q ss_pred hhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCCCccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCC-CHHHHH
Q 007010 409 VASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDS-SEKQLA 487 (621)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~-~~~~~~ 487 (621)
. . .|++|+++++++ |++++|++|+|||.|+|+|+| +++||+|+|++..| ++.|+
T Consensus 345 ~-------------~-~~~~l~~~a~~~---------~~g~~gl~~lP~~~Ger~P~~-~~arg~~~Gl~~~~~~~~~l- 399 (515)
T 3i8b_A 345 G-------------V-DYDELAKLAFAS---------KPGANGITLVPYFDGERTPNR-PNATATFSGMTLANTTRENL- 399 (515)
T ss_dssp T-------------C-CHHHHHHHHHHS---------CTTGGGCEEECCTTCBTTTTB-TTCCCEEESCCTTTCSHHHH-
T ss_pred C-------------C-CHHHHHHHHHhC---------CCCCCCeEEecCCCCCcCCCC-cCcceEEecCCCCCCCHHHH-
Confidence 3 2 378888887763 368899999999999999976 99999999999999 99985
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccccC
Q 007010 488 LLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRYS 567 (621)
Q Consensus 488 ~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~~ 567 (621)
+||++||+||.+|++++.|++.|.++++|+++||++||++|+||+||++|+||+++...|++|+|||++|++++|.+.
T Consensus 400 --~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~ 477 (515)
T 3i8b_A 400 --ARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQAAWVLSGET 477 (515)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCS
T ss_pred --HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHHHHHcCCCC
Confidence 569999999999999999999888999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHHHHHhh-cCCcEEcCCCChhhHHHHHHHH
Q 007010 568 SLIEAMKAMN-AAGQVIHPSKDPKVKKYHDAKY 599 (621)
Q Consensus 568 s~~ea~~~~~-~~~~~~~P~~~~~~~~~y~~~y 599 (621)
++++ +. ....+|+|.++++.++.|++.|
T Consensus 478 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (515)
T 3i8b_A 478 EPPA----WQLTIDGVETGEPTEAVYEAYAKAR 506 (515)
T ss_dssp SCCC----CCCCEEEEECCCCCHHHHHHHHHHH
T ss_pred ChhH----hhhhccccCCCCccHHHHHHHHHHh
Confidence 7653 32 2356788866666666655554
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.8e-76 Score=649.02 Aligned_cols=452 Identities=14% Similarity=0.141 Sum_probs=360.7
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC-
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT- 132 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~- 132 (621)
|+|+||||+|||++|++++|.+|+++.+.+.+++.++.+||+||||++||+++++++++++ + .+|.+||||+|
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~~I~aIgis~~~ 78 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----HPVTTIVPVGHG 78 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----SCCCEEEEEECS
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----cCCCEEEEecCc
Confidence 5799999999999999999999999999999998766899999999999999999999886 2 57999999998
Q ss_pred CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccChhHHhhhCCCCCCC--ChHHHHHHHHHhcchhHHhh
Q 007010 133 CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPE--MQPPKLLWVKENLQESWSMV 210 (621)
Q Consensus 133 ~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~--~~~~kl~Wl~~~~pe~~~~~ 210 (621)
+++|+|| +|+|| +|+|+|+|+|+.++++++.+... .+++||+++++. ++++||+|+++|+||+|+|+
T Consensus 79 ~~~v~~D-~G~pl---------~~ai~w~D~R~~~~~~~l~~~~~-~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe~~~~~ 147 (482)
T 3h6e_A 79 AGIAALT-DGRLA---------FPPLDYEQSIPEAVMADYRSQRD-PFARTGSPALPDGLNIGSQLWWLDQLHPDVMANA 147 (482)
T ss_dssp SCEEEEE-TTEEC---------SCCBCTTSCCCHHHHHHHHTTCC-CHHHHCCCCCSTTSSHHHHHHHHHHHSHHHHHSC
T ss_pred CCEEEEC-CCCEe---------ccccccCCcccHHHHHHHHhhCh-HHHHhCCCCCCCchhHHHHHHHHHHcCchhhhcC
Confidence 9999999 99999 89999999999999999987653 389999999997 89999999999999999999
Q ss_pred cceecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccccCccccc
Q 007010 211 FRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAKIGRSVAF 290 (621)
Q Consensus 211 ~~~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~i~~~v~~ 290 (621)
+ |++++|||.|+|||+.. ++.|+ .+|+|++||+++++|+ ++|+.+||+ .+ || ++++
T Consensus 148 ~-~l~~~dyl~~~LTG~~~-td~s~-------------~As~t~l~d~~~~~W~-~ll~~~gi~-~~---LP----~v~~ 203 (482)
T 3h6e_A 148 T-LLPWAQYWAWFLTGRAV-SEVTS-------------LGCHSDLWDPQDGDFS-PMAKRLGWA-AR---FA----PIVR 203 (482)
T ss_dssp E-EEEHHHHHHHHTTSCCC-EEHHH-------------HTTTCSSEETTTTEEC-HHHHHTTCG-GG---BC----CEEC
T ss_pred E-EEccHHHHHHHHhCCee-eecch-------------hhhccCCccCCcCcHH-HHHHHcCCH-Hh---CC----CCcC
Confidence 9 99999999999999875 33332 1457889999999999 599999998 43 47 6889
Q ss_pred CCCccCCCccHHHHHHcCCCCCCcEEEechhhhhhhcc---cccccCccchhhhhhhhhhccceEEEEecccceecceeC
Q 007010 291 PGHPLGSGLTPAAAKELGLVPGTPVGTSLIDAHAGGVG---VMESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSR 367 (621)
Q Consensus 291 ~g~~~G~~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg---~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~ 367 (621)
+++++|+ |++++|+++||++|+||++|++|++|+++| + |..++| ..+++++|||.+++...+
T Consensus 204 ~~~~~G~-l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG~~g~-g~~~~g-------------~~~~~s~GT~~~~~~~~~ 268 (482)
T 3h6e_A 204 AGDTVGA-LLPAIAERTGLSPDVQVLAGLHDSNAALLAARGF-AEIADN-------------EATVLSTGTWFIAMRLPA 268 (482)
T ss_dssp TTSEEEE-CCHHHHHHHTCCTTCEEECCEEHHHHHHHHHTTS-TTTTTS-------------SEEEEECSSSEEEEEECS
T ss_pred CCceeee-eCHHHHHHhCCCCCCEEEEeCcHHHHHHhhhhcc-CCcCCC-------------CEEEEECCceeEEEEecC
Confidence 9999997 999999999999999999999999999999 7 655553 236889999987655555
Q ss_pred ---c-ccccCCccccccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCC
Q 007010 368 ---N-KLFIPGVWGPFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSP 443 (621)
Q Consensus 368 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p 443 (621)
+ +..++.. ..++. .....|.+++...++|.+++|+++......++ .++..+.+++..
T Consensus 269 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~----------~~~~~~~~a~~~------- 329 (482)
T 3h6e_A 269 TPVDTATLPEAR-DCLVN-VDVHGRPVPSARFMGGREIETLIEIDTRRVDI----------KPDQPALLAAVP------- 329 (482)
T ss_dssp SCCCGGGCCGGG-TEEEE-ECTTSCEEEEEEECHHHHHHHHHCSGGGCTTC----------GGGHHHHHHTHH-------
T ss_pred ccCCccccchhh-ceeec-cccccccccchhhhhHHHHHHHHHhccccccc----------ccchhhHHHhcc-------
Confidence 3 3233311 11111 11234667777889999999997543210000 011112222221
Q ss_pred CccCCCCCeEEccccCCCCCCCCCCCCceeEEcCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCcCEEEEe
Q 007010 444 FVAALTEDIHVLPDFHGNRSPIADPKSKGIICGMTLDSSEKQLALLYLATVQG--IAYGTRHIVEHCNAHGHKIDTLLAC 521 (621)
Q Consensus 444 ~~~~g~~gl~flP~l~Ger~P~~d~~arg~f~Gl~~~~~~~~~~~~~rAvlEg--ia~~~r~~l~~l~~~g~~~~~I~~~ 521 (621)
+++++|++|+|||+|+|+|+||+ ||+|+|++. .| ++||++|+ +||++|++++.|++. ++|+++
T Consensus 330 --~~g~~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~---l~RA~lE~~Gia~~~r~~l~~~~~~----~~i~~~ 394 (482)
T 3h6e_A 330 --EVLRHGRMILPTLMRGFGPYPHG--RFAWINRPE----DW---FERRAAACLYAALVADTALDLIGST----GRILVE 394 (482)
T ss_dssp --HHHHTTCEEESCSSTTCSSCTTC--CCEEESCCS----SH---HHHHHHHHHHHHHHHHHHHHHTTCC----SEEEEE
T ss_pred --ccCCCCeEEecCCCCCCCCCCCC--ceEEeCCCH----HH---HHHHHHHHHhHHHHHHHHHHHhcCC----CeEEEe
Confidence 24789999999999999999987 999999998 45 56799995 999999999998753 789999
Q ss_pred cCCCCCHHHHHHHHHh-hCCceeeccCCCchhHHHHHHHHhhccccCCHHHHHHHhhcCCcEEcCCCChhhHHHHHHHHH
Q 007010 522 GGLAKNPLFLQQHADI-IGCPIILPRENESVLLGAAILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPKVKKYHDAKYL 600 (621)
Q Consensus 522 GGga~s~~w~Qi~Adv-lg~pV~~~~~~e~~alGAA~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~~~~~y~~~y~ 600 (621)
||++||++|+||+||| ||+||+++...|++++|||++|+++.-. .....+.|..+..-+..+++.++
T Consensus 395 GG~a~s~~w~Qi~ADv~~g~pV~~~~~~e~~alGAA~lA~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 462 (482)
T 3h6e_A 395 GRFAEADVFVRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRP------------QGELVRIEPLDTGSWADLDTYRN 462 (482)
T ss_dssp SGGGGCHHHHHHHHHHSTTSEEEEESSCCCTTGGGHHHHCTTCCC------------SSCEEECCCCCC----CHHHHHH
T ss_pred CCcccCHHHHHHHhhhcCCCeEEEcCCCchHHHHHHHHhCccccc------------ccccCcccccccccchHHHHHHH
Confidence 9999999999999999 9999999999999999999999987321 12456667444112234555566
Q ss_pred HHHHHHH
Q 007010 601 IFRELFE 607 (621)
Q Consensus 601 ~y~~l~~ 607 (621)
+|++..+
T Consensus 463 ~w~~~~~ 469 (482)
T 3h6e_A 463 RWQAEVE 469 (482)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 6665543
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=5.4e-75 Score=643.77 Aligned_cols=463 Identities=16% Similarity=0.161 Sum_probs=372.9
Q ss_pred CCCCeEEEEecCccceeeEEEcCCCCEEEEEEeeec----c-ccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 007010 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQ----I-WKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKG 126 (621)
Q Consensus 52 m~~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~----~-~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~a 126 (621)
|.|+++||||+|||++|++++|.+|+++...+.++. . .+.+|+.|||+++||+++.++++++... ..+|.+
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~----~~~i~~ 76 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA----GIAIDS 76 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----TCCCCE
T ss_pred CCcceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----CCCceE
Confidence 667899999999999999999999998877766553 1 2378999999999999999999988652 357999
Q ss_pred EEEcCC-CceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHHHHHccC--hhHHhhhCCCCCCCChHHHHHHHHHhc
Q 007010 127 VGFAAT-CSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRN--SPVLQYCGGAVSPEMQPPKLLWVKENL 203 (621)
Q Consensus 127 Igis~~-~~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~--~~~~~~tG~~~~~~~~~~kl~Wl~~~~ 203 (621)
||||+| +++++||++|+|+ +|+|.|+|.|+.++++++.+.. +.++++||+++++.++++||+|+++|+
T Consensus 77 Igis~q~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~ 147 (489)
T 2uyt_A 77 IGIDTWGVDFVLLDQQGQRV---------GLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQ 147 (489)
T ss_dssp EEEEECSSCEEEECTTSCEE---------SCCBCTTCGGGTTHHHHHHHHHCHHHHHHHHCCCCCTTSHHHHHHHHHHHC
T ss_pred EEEecCcccEEEECCCCCCc---------cCCccccCCccHHHHHHHHHhcCHHHHHHHhCCCCCCccHHHHHHHHHhcC
Confidence 999998 9999999999999 8899999999999999998653 578999999999999999999999999
Q ss_pred chhHHhhcceecchhHHhhhhccccccccccccccccccccchhhcccccccccCCCCCCCHHHHHHcCCCccccccccc
Q 007010 204 QESWSMVFRWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMQQMNEKGFRDMEACGWDDEFWEEIGLGDLIDGHHAK 283 (621)
Q Consensus 204 pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~s~~~~~~~~~~~~~~~as~t~l~D~~~~~Ws~~ll~~~gi~~~~~~~lp~ 283 (621)
||+|++++++++++|||.|+|||+... +.|+ +|+|++||+++++||+++|+.+||++.+ ||
T Consensus 148 P~~~~~~~~~l~~~dyl~~~LTG~~~~-d~s~--------------As~t~l~d~~~~~W~~~ll~~~gi~~~~---lP- 208 (489)
T 2uyt_A 148 PELIPHIAHALLMPDYFSYRLTGKMNW-EYTN--------------ATTTQLVNINSDDWDESLLAWSGANKAW---FG- 208 (489)
T ss_dssp GGGGGGCCEEEEHHHHHHHHHHSCCCC-BHHH--------------HGGGTCEETTTTEECHHHHHHHTCCGGG---SC-
T ss_pred chHHHHhhhccCcHHHHHHHHhCCccc-eehh--------------hhhhcccccCcCccCHHHHHHcCCCHHH---CC-
Confidence 999999999999999999999998752 4433 5688999999999999999999999754 46
Q ss_pred cCcccccCCCccCCCccHHHHHHcCCCCCCcEEE-echhhhhhhcccccccCccchhhhhhhhhhccceEEEEeccccee
Q 007010 284 IGRSVAFPGHPLGSGLTPAAAKELGLVPGTPVGT-SLIDAHAGGVGVMESVPESVSEAKENEEEAICHRMVLVCGTSTCH 362 (621)
Q Consensus 284 i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV~~-g~~D~~aa~lg~~g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~ 362 (621)
+++++++++|+ ++++ .| +|+||++ |++|++|+++|+ |...+ +++++++|||+++
T Consensus 209 ---~i~~~~~~~G~-~~~~----~~--~g~pV~~~g~~D~~aa~~g~-g~~~~--------------g~~~~s~GTs~~~ 263 (489)
T 2uyt_A 209 ---RPTHPGNVIGH-WICP----QG--NEIPVVAVASHDTASAVIAS-PLNGS--------------RAAYLSSGTWSLM 263 (489)
T ss_dssp ---CCBCTTCEEEE-EECT----TC--CEEEEECCCCBHHHHHHHHS-CCCST--------------TEEEEEESSSEEE
T ss_pred ---CccCCCcceee-eecc----cC--CCCcEEEECchHHHHHHhcC-CCCCC--------------CcEEEEEchHhhc
Confidence 68889999996 7532 23 7899997 889999999998 65544 5899999999998
Q ss_pred cceeCcccccCC-ccc-cccccccCCeeEEcccccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhc
Q 007010 363 MAVSRNKLFIPG-VWG-PFWSAMVPKFWLTEGGQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHER 440 (621)
Q Consensus 363 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 440 (621)
...++++..++. ... .++++..++.|..++.+.. .|+++.+... .+.+.|+++.+.+ +
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~W~~~~~~~~---------~~~~~~~~l~~~a-~----- 323 (489)
T 2uyt_A 264 GFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMG-----LWLLQRVLQE---------RQINDLPALIAAT-Q----- 323 (489)
T ss_dssp EEEESSCCCSHHHHHHTCEEECCGGGCEEEEEEECT-----THHHHHHHHH---------TTCCCHHHHHHHH-T-----
T ss_pred ccccCCCccCHHHHhhcceeecCCCCeEEEehhHhH-----HHHHHHhhcc---------cchhhHHHHHHHh-c-----
Confidence 888887655431 221 2333455788988877652 5998876421 0123455554432 2
Q ss_pred CCCCccCCCCCeEEccccCCCCCCCCCCC-----CceeEEcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC
Q 007010 441 NSPFVAALTEDIHVLPDFHGNRSPIADPK-----SKGIICGM--TLDSSEKQLALLYLATVQGIAYGTRHIVEHCNA-HG 512 (621)
Q Consensus 441 ~~p~~~~g~~gl~flP~l~Ger~P~~d~~-----arg~f~Gl--~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~-~g 512 (621)
. +|++++ +|+| ++.|+|+|. .+|.|.|+ +..|++.|+ +||++||+||.+|++++.|++ .|
T Consensus 324 -~---~~~~~~-l~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l---~RAvlEgia~~~r~~~~~l~~~~g 391 (489)
T 2uyt_A 324 -A---LPACRF-IINP----NDDRFINPDEMCSEIQAACREMAQPIPESDAEL---ARCIFDSLALLYADVLHELAQLRG 391 (489)
T ss_dssp -T---SCSSSS-CCCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHH---HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -c---CCCcCe-eECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 246654 4788 577888887 48889888 478888885 569999999999999999987 57
Q ss_pred CCcCEEEEecCCCCCHHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhcccc---CCHHHHHHHhhcCCcEEcCCCCh
Q 007010 513 HKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKRY---SSLIEAMKAMNAAGQVIHPSKDP 589 (621)
Q Consensus 513 ~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~~---~s~~ea~~~~~~~~~~~~P~~~~ 589 (621)
.++++|+++||++||++|+||+||++|+||+++. .|++++|||++|+.+.+.. ++++++++.+.. .++|+| |+
T Consensus 392 ~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~~-~~~~~P--~~ 467 (489)
T 2uyt_A 392 EDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTAN-LTTFTP--NP 467 (489)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHSC-CEEECC--CT
T ss_pred CCCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhCC-CeEECC--Cc
Confidence 8899999999999999999999999999999876 7999999977777766544 445555555544 589999 99
Q ss_pred hhH-HHHHHHHHHHHHHHH
Q 007010 590 KVK-KYHDAKYLIFRELFE 607 (621)
Q Consensus 590 ~~~-~~y~~~y~~y~~l~~ 607 (621)
+++ +.|+++|++|++|.+
T Consensus 468 ~~~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 468 DSEIAHYVALIHSTRQTKE 486 (489)
T ss_dssp TSHHHHHHHHTTC------
T ss_pred chHHHHHHHHHHHhhchhh
Confidence 999 999999999998764
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.64 E-value=1.2e-15 Score=155.08 Aligned_cols=129 Identities=16% Similarity=0.114 Sum_probs=96.6
Q ss_pred cccchhHHHHHHHHhhhhhhHHHHHHhhcCCCHHHHHHHHHHhhhhhcCCCCccCCCCCeEEccccCCCCCCCCCCCCce
Q 007010 393 GQSATGALLDYIIENHVASRSLANRAASRHVSLFELLNGTLESMIHERNSPFVAALTEDIHVLPDFHGNRSPIADPKSKG 472 (621)
Q Consensus 393 ~~~~~G~~l~Wl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~~~g~~gl~flP~l~Ger~P~~d~~arg 472 (621)
+...+|..++|+.+.+. .+ ++++++++.+. . .|+..|+|++. .+++
T Consensus 127 ca~GtG~~le~~a~~lg-------------~~-~~el~~la~~~------------~-----~p~~~~~~c~v---fa~s 172 (270)
T 1hux_A 127 CAAGTGRFLDVMANILE-------------VK-VSDLAELGAKS------------T-----KRVAISSTCTV---FAES 172 (270)
T ss_dssp CCTTSHHHHHHHHHHHT-------------CC-TTTHHHHHTTC------------C-----SCCCCCCCSHH---HHHH
T ss_pred cchhhHHHHHHHHHHhC-------------CC-HHHHHHHHhhC------------C-----CCCCcccccch---hHhH
Confidence 33345789999988653 22 45666655331 1 46667888763 3567
Q ss_pred eEEcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeeccCCC-c
Q 007010 473 IICGMT-LDSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRENE-S 550 (621)
Q Consensus 473 ~f~Gl~-~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~e-~ 550 (621)
.++++. ..++++|++ |+++|+|++.+..+ ++..+. .++|+++||+++|+.|+|+++|++|+||.++...+ .
T Consensus 173 ~v~~l~~~g~~~~di~---~av~e~Va~~i~~~---~~~~~~-~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~ 245 (270)
T 1hux_A 173 EVISQLSKGTDKIDII---AGIHRSVASRVIGL---ANRVGI-VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYN 245 (270)
T ss_dssp HHHHHHHTTCCHHHHH---HHHHHHHHHHHHHH---HHTTCC-CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGH
T ss_pred HHHHHhhCCCCHHHHH---HHHHHHHHHHHHHH---HhcCCC-CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchH
Confidence 777775 777888865 59999999997444 444333 47899999999999999999999999999988777 5
Q ss_pred hhHHHHHHHHhh
Q 007010 551 VLLGAAILGAVA 562 (621)
Q Consensus 551 ~alGAA~lA~~a 562 (621)
+|+|||++|...
T Consensus 246 ~AlGAAl~A~~~ 257 (270)
T 1hux_A 246 GALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHh
Confidence 999999999764
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.57 E-value=6.3e-06 Score=82.91 Aligned_cols=72 Identities=14% Similarity=0.239 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHHHHHH
Q 007010 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAIL 558 (621)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~l 558 (621)
+.++..+++.+++.++-.++..++ +.+ .++.|+++||+++++.+.+++.+.|+.||.++. ..+++|+|||+.
T Consensus 199 ~~~~~~~~~~~~~~i~~~i~~~l~---~~~-~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~ 271 (272)
T 3h1q_A 199 HREIMRVVRPVIEKMALIVKEVIK---NYD-QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALF 271 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT---TSC-SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---hcC-CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhc
Confidence 455555666788877755555443 222 377899999999999999999999999999866 456889999975
No 22
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.30 E-value=1.6e-06 Score=89.82 Aligned_cols=91 Identities=20% Similarity=0.359 Sum_probs=71.7
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
+|+||||+|+|++|++++|.+|+++...+.+++ .+++++++++.+.+.+++++++.+.+..+|.+|||+. .+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~-pG 77 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETN-------ILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGT-PG 77 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-------CTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-SS
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC-------CCCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEec-cc
Confidence 699999999999999999999999998877765 2357889999999999999988766667899999843 33
Q ss_pred eEEecCC-CCceeecCCCCCCcceeEEcCc
Q 007010 135 LVAVDAD-GSPVSVSWNGDSRRNIIVWMDH 163 (621)
Q Consensus 135 ~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~ 163 (621)
++|.+ |..+. .|.+.|.+.
T Consensus 78 --~vd~~~g~v~~--------~~~l~w~~~ 97 (326)
T 2qm1_A 78 --SVDIEKGTVVG--------AYNLNWTTV 97 (326)
T ss_dssp --EEETTTTEEEC--------BGGGTBCSC
T ss_pred --ceeCCCCEEEe--------cCCCCccCC
Confidence 45654 65542 344567654
No 23
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.21 E-value=3.1e-06 Score=88.44 Aligned_cols=74 Identities=22% Similarity=0.245 Sum_probs=59.7
Q ss_pred CCCCCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCC-CEEEEEE
Q 007010 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGE-EVKGVGF 129 (621)
Q Consensus 51 ~m~~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~-~I~aIgi 129 (621)
.||++|+||||+|+|++|++++|.+|+++.+.+.+.. .+.+++++++++.+.+++++++++.+.... +|.+|||
T Consensus 2 ~~M~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi 76 (347)
T 2ch5_A 2 QFMAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLST-----NHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGL 76 (347)
T ss_dssp CSSSCEEEEEEECTTCEEEEEEETTSCEEEEEEECCC-----CHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEE
T ss_pred cccceEEEEEEcCccceEEEEEeCCCCEEEEEeCCCC-----CcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEE
Confidence 3444599999999999999999999999987766321 123468999999999999999987766555 7888888
No 24
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.20 E-value=4.5e-06 Score=85.74 Aligned_cols=73 Identities=21% Similarity=0.359 Sum_probs=56.9
Q ss_pred CCCC--CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCE--EE
Q 007010 51 ARSR--SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEV--KG 126 (621)
Q Consensus 51 ~m~~--~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I--~a 126 (621)
+|+| +|+||||+|+|++|++++|.+|+++.+.+.+.. . ..++++++++.+.+++++++++.+.++.+| .+
T Consensus 5 ~m~~~~~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~-----~-~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ 78 (305)
T 1zc6_A 5 TMNPSIRYLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS-----A-LSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACA 78 (305)
T ss_dssp ---CCCCEEEEEEECSSCEEEEEEETTCCEEEEEEESCC-----C-GGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEE
T ss_pred hhcccCCEEEEEEcCccceEEEEEcCCCCEEEEEeCCCC-----C-cccCHHHHHHHHHHHHHHHHHhcCCChhhhccce
Confidence 5654 599999999999999999999999987765321 0 236899999999999999998877666676 56
Q ss_pred EEE
Q 007010 127 VGF 129 (621)
Q Consensus 127 Igi 129 (621)
|||
T Consensus 79 igi 81 (305)
T 1zc6_A 79 IGL 81 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 666
No 25
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.11 E-value=4.9e-06 Score=86.14 Aligned_cols=89 Identities=29% Similarity=0.448 Sum_probs=68.0
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (621)
|+|+||||+|+|++|++++|.+|+++.+.+.++ +++++++++.+.+.++++.++ .+|.+|||+. .
T Consensus 1 M~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~~-p 65 (321)
T 3vgl_A 1 MGLTIGVDIGGTKIAAGVVDEEGRILSTFKVAT---------PPTAEGIVDAICAAVAGASEG-----HDVEAVGIGA-A 65 (321)
T ss_dssp -CEEEEEEECSSEEEEEEECTTCCBCCCEEEEC---------CSSHHHHHHHHHHHHHHHHTT-----CCEEEEEEEE-S
T ss_pred CcEEEEEEECCCEEEEEEECCCCCEEEEEEeeC---------CCCHHHHHHHHHHHHHHHHhh-----cCceEEEEec-c
Confidence 369999999999999999999999998777665 257999999999999988753 4789999843 3
Q ss_pred ceEEecCC-CCceeecCCCCCCcceeEEcCcchHH
Q 007010 134 SLVAVDAD-GSPVSVSWNGDSRRNIIVWMDHRAVK 167 (621)
Q Consensus 134 ~~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~ 167 (621)
+ ++|.+ |.... .|.+.|.+-.-.+
T Consensus 66 G--~vd~~~g~v~~--------~~~l~w~~~~l~~ 90 (321)
T 3vgl_A 66 G--YVDDKRATVLF--------APNIDWRHEPLKD 90 (321)
T ss_dssp S--EECTTSSCEEE--------CSSSCCEEECHHH
T ss_pred c--cEeCCCCEEEe--------CCCCCCcCCCHHH
Confidence 4 56765 55553 4566787655433
No 26
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.09 E-value=1.1e-05 Score=87.10 Aligned_cols=91 Identities=14% Similarity=0.181 Sum_probs=72.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.|+||||+|+|++|++++|.+|+++.+.+.+++ .++++++++.+.+.+++++++.+.+..+|.+|||+. .+
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-pG 178 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIH--------EIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITL-PG 178 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEECC--------CCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEE-SS
T ss_pred CEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEec-cC
Confidence 589999999999999999999999998877764 357999999999999999988776667899999843 33
Q ss_pred eEEecCC-CCceeecCCCCCCcceeEEcCcc
Q 007010 135 LVAVDAD-GSPVSVSWNGDSRRNIIVWMDHR 164 (621)
Q Consensus 135 ~v~vD~~-G~pl~~~~~~~~~~p~i~W~D~R 164 (621)
++|.+ |..+. .|.+.|.+-.
T Consensus 179 --~vd~~~g~v~~--------~~~l~w~~~~ 199 (429)
T 1z05_A 179 --LVNSEQGIVLQ--------MPHYNVKNLA 199 (429)
T ss_dssp --EEETTTTEEEE--------CSSSBCSSBC
T ss_pred --cEeCCCCeEee--------cCCCCCCCCC
Confidence 56764 66653 3556687654
No 27
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.03 E-value=8.6e-06 Score=87.14 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=65.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.|+||||+|+|++|++++|.+|+++.+.+.+++ +++++++++.+.+++++++++.+.+..+|.+|||+. .+
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-pG 155 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDLSSKLVVEESQELA--------LKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITL-PG 155 (406)
T ss_dssp CEEEEEEEETTEEEEEEEETTCCEEEEEEEECC--------SSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEE-SS
T ss_pred cEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEe-ec
Confidence 589999999999999999999999988777663 467888999999999999987666667899999843 33
Q ss_pred eEEecCC-CCce
Q 007010 135 LVAVDAD-GSPV 145 (621)
Q Consensus 135 ~v~vD~~-G~pl 145 (621)
++|.+ |..+
T Consensus 156 --~vd~~~g~v~ 165 (406)
T 1z6r_A 156 --IIDTENGIVH 165 (406)
T ss_dssp --EEETTTTEEE
T ss_pred --CEeCCCCEEe
Confidence 45665 6555
No 28
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.02 E-value=8.6e-06 Score=86.37 Aligned_cols=91 Identities=18% Similarity=0.272 Sum_probs=70.5
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.|+||||+|+|++|++++|.+|+++...+.+++ .+++++++++.+.+.+++++++.+.+..+|.+|||+. .+
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~-------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~-pG 158 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLP-------SQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAA-PG 158 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-------SSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE-SS
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccC-------CCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEe-ec
Confidence 589999999999999999999999998877765 2458999999999999999887655557788888843 33
Q ss_pred eEEecC-CCCceeecCCCCCCcceeEEcCc
Q 007010 135 LVAVDA-DGSPVSVSWNGDSRRNIIVWMDH 163 (621)
Q Consensus 135 ~v~vD~-~G~pl~~~~~~~~~~p~i~W~D~ 163 (621)
++|. +|..+. .|.+.|.+-
T Consensus 159 --~vd~~~g~v~~--------~~~l~w~~~ 178 (380)
T 2hoe_A 159 --PIDTERGIIID--------PRNFPLSQI 178 (380)
T ss_dssp --CEETTTTEECC--------CSSCTTBTS
T ss_pred --cEECCCCEEec--------cCCCCCcCC
Confidence 3565 466552 345567654
No 29
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=97.99 E-value=1.7e-05 Score=82.79 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=61.9
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.|+||||+|+|++|++++|.+|+++.+.+.+++ ++++++++.+.+.+++++++.+....+|.+|||+. .+
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~-pG 99 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP---------KTYEERINLILQMCVEAAAEAVKLNCRILGVGIST-GG 99 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEECC---------SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE-SS
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC---------CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEec-cc
Confidence 589999999999999999999999988766553 47889999999999998876443446798998843 33
Q ss_pred eEEecCC-CCce
Q 007010 135 LVAVDAD-GSPV 145 (621)
Q Consensus 135 ~v~vD~~-G~pl 145 (621)
++|.+ |..+
T Consensus 100 --~vd~~~g~v~ 109 (343)
T 2yhw_A 100 --RVNPREGIVL 109 (343)
T ss_dssp --EEETTTTEEE
T ss_pred --CEeCCCCEEE
Confidence 45654 6554
No 30
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.92 E-value=8.9e-06 Score=83.15 Aligned_cols=98 Identities=24% Similarity=0.271 Sum_probs=67.0
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC-C-
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT-C- 133 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~-~- 133 (621)
|+||||+|+|++|++++|.+|+++.+.+.+++ .+.+++++++++.+.+.+++++++. -...+||+.+. .
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~~~~~----~~~igi~~~G~~~~ 73 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPG-----NYHNVGLTRAIENIKEAVKIAAKGE----ADVVGMGVAGLDSK 73 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC-----CHHHHCHHHHHHHHHHHHHHHHTSC----CSEEEEEETTCCSH
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCC-----CcccCCHHHHHHHHHHHHHHHHhcC----CCEEEEEcCCCCch
Confidence 89999999999999999999999988776654 2235789999999999999987642 12344555443 1
Q ss_pred -ceEEecCCCCceeecCCCCCCcceeEEcCcchHHHHH
Q 007010 134 -SLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAE 170 (621)
Q Consensus 134 -~~v~vD~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~ 170 (621)
+.+.+.+.-+.+ ..|++.++|.++....+
T Consensus 74 ~~~~~l~~~l~~~--------~~pv~v~ND~~aaa~~e 103 (299)
T 2e2o_A 74 FDWENFTPLASLI--------APKVIIQHDGVIALFAE 103 (299)
T ss_dssp HHHHHHHHHHTTS--------SSEEEEEEHHHHHHHHH
T ss_pred hHHHHHHHHHHhC--------CCCEEEeCcHHHHHhhc
Confidence 122222111102 15888899988776543
No 31
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.87 E-value=2e-05 Score=81.58 Aligned_cols=91 Identities=19% Similarity=0.166 Sum_probs=68.1
Q ss_pred CCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (621)
..|+||||+|+|++|++++|.+|+++...+.+++ ...+++++++.+.+.++++++. ..+|.+|||+. .
T Consensus 18 ~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~----~~~i~gigi~~-p 85 (321)
T 3r8e_A 18 QGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-------DWVNGIGFVESMKLEIGNFLKQ----YPIVKGVGIGW-P 85 (321)
T ss_dssp -CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-------HHHTTTCHHHHHHHHHHHHHHH----CTTCCEEEEEE-S
T ss_pred CcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-------CCCCHHHHHHHHHHHHHHHHhc----cCCeeEEEEEe-c
Confidence 3689999999999999999999999998887775 2357788999999999888762 35788888843 3
Q ss_pred ceEEecC-CCCceeecCCCCCCcceeE-EcCcchH
Q 007010 134 SLVAVDA-DGSPVSVSWNGDSRRNIIV-WMDHRAV 166 (621)
Q Consensus 134 ~~v~vD~-~G~pl~~~~~~~~~~p~i~-W~D~Ra~ 166 (621)
+ ++|. +|..+. .|.+. |.+-.-.
T Consensus 86 G--~vd~~~g~v~~--------~~~l~~w~~~~l~ 110 (321)
T 3r8e_A 86 G--LVSLDRTKVIL--------LPNIPSVVNVPIV 110 (321)
T ss_dssp S--EECTTSCCEEE--------BTTBCCCCSCCHH
T ss_pred c--cEECCCCEEEe--------CCCCccccCCCHH
Confidence 4 5674 477663 34554 8775433
No 32
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.84 E-value=7.7e-05 Score=77.32 Aligned_cols=75 Identities=19% Similarity=0.237 Sum_probs=59.8
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCce
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (621)
|+||||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++.++.+ .+.+|||+. .+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~-pG- 90 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVATERVPTP--------TDDYPLLLETIAGLVAKYDQEFA----CEGKIGLGL-PG- 90 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC--------TTCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE-SE-
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe-ec-
Confidence 79999999999999999999999998887765 34889999999999999887643 366777732 34
Q ss_pred EEecC-CCCce
Q 007010 136 VAVDA-DGSPV 145 (621)
Q Consensus 136 v~vD~-~G~pl 145 (621)
++|. +|...
T Consensus 91 -~vd~~~g~v~ 100 (327)
T 4db3_A 91 -MEDADDATVL 100 (327)
T ss_dssp -EECTTTCCEE
T ss_pred -cEeCCCCEEE
Confidence 5675 47655
No 33
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.67 E-value=2.4e-05 Score=80.57 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=63.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.|+||||+|+|++|++++|.+|+++.+.+.+++ +.+++++++.+.+.+++++++.+ .+|.+|||+. .+
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~---~~i~gigi~~-pG 74 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA--------EVIAPGLVSGIGEMIDEQLRRFN---ARCHGLVMGF-PA 74 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEHH--------HHHTTCHHHHHHHHHHHHHHHHT---EEEEEEEEEE-SS
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecCc--------cccHHHHHHHHHHHHHHHHHhcC---CCeeEEEEec-cc
Confidence 489999999999999999999999998777664 23356688888888888776543 3588888843 34
Q ss_pred eEEecCC-CCceeecCCCCCCcceeEEcC
Q 007010 135 LVAVDAD-GSPVSVSWNGDSRRNIIVWMD 162 (621)
Q Consensus 135 ~v~vD~~-G~pl~~~~~~~~~~p~i~W~D 162 (621)
++|.+ |..+. .|.+.|.+
T Consensus 75 --~vd~~~g~v~~--------~~~l~~~~ 93 (310)
T 3htv_A 75 --LVSKDKRTIIS--------TPNLPLTA 93 (310)
T ss_dssp --CBCTTSSCBCS--------CCSSSCCH
T ss_pred --cEeCCCCEEEe--------CCCCCCcc
Confidence 45765 66553 45566765
No 34
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.42 E-value=0.00017 Score=73.89 Aligned_cols=57 Identities=11% Similarity=0.234 Sum_probs=43.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (621)
+|+||||+|+|++|++++|.+|+++.+.+.+++ +++++++.+.+.++ + .+|.+|||+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~----------~~~~~l~~i~~~~~----~-----~~i~gigi~ 59 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX----------MPDETIEXVIQYFS----Q-----FSLQAIGIG 59 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC----------CHHHHHHHHHHHHT----T-----SCCSEEEEE
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecCC----------ChHHHHHHHHHHhc----c-----CCceEEEEE
Confidence 589999999999999999999999988776653 46666665554442 1 368888884
No 35
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.41 E-value=0.00031 Score=71.71 Aligned_cols=71 Identities=17% Similarity=0.277 Sum_probs=51.5
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCce
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (621)
|+||||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.+ ++ ..+|.+|||+. .+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~--------~~~~~~~~~~i~~~~----~~----~~~i~gigi~~-pG- 66 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEIILTKSAEIS--------GSDGDQILAEMKVFL----AE----NTDVTGIAVSA-PG- 66 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECS--------TTCHHHHHHHHHHHH----HT----CTTCCEEEEEE-SS-
T ss_pred EEEEEEeCCCeEEEEEECCCCCEEEEEEecCC--------CCCHHHHHHHHHHHH----hh----cCCeeEEEEec-Cc-
Confidence 79999999999999999999999998877764 235666666555443 32 24688888843 34
Q ss_pred EEecCC-CCce
Q 007010 136 VAVDAD-GSPV 145 (621)
Q Consensus 136 v~vD~~-G~pl 145 (621)
++|.+ |..+
T Consensus 67 -~vd~~~g~v~ 76 (297)
T 4htl_A 67 -YVNPKTGLIT 76 (297)
T ss_dssp -EECTTTCEEE
T ss_pred -ceeCCCCEEE
Confidence 56754 7665
No 36
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.40 E-value=0.00058 Score=68.46 Aligned_cols=79 Identities=20% Similarity=0.354 Sum_probs=52.2
Q ss_pred CeEEEEecCccceeeEEEcCC-CCEEEE-EEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 55 SVFLGVDVGTGSARAGLFDES-GKLLGS-ASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~-g~vv~~-~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
.|+||||+|+|++|++++|.+ |+++.. .+.+++ ...+++++++.+.+.+++++++... ...+.+|||+ .
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~igi~-~ 82 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP-------QPATPESVAEAVALVVAELSARPEA-PAAGSPVGVT-F 82 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC-------SSCCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEEEE-E
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC-------ccCCHHHHHHHHHHHHHHHHHhccc-cCccceEEEE-c
Confidence 479999999999999999976 777743 233433 1347889999999999988764321 1223344442 1
Q ss_pred CceEEecCCCCce
Q 007010 133 CSLVAVDADGSPV 145 (621)
Q Consensus 133 ~~~v~vD~~G~pl 145 (621)
.|.| | +|..+
T Consensus 83 pG~v--~-~g~v~ 92 (267)
T 1woq_A 83 PGII--Q-HGVVH 92 (267)
T ss_dssp SSCE--E-TTEEC
T ss_pred cceE--c-CCEEE
Confidence 5543 5 56654
No 37
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.36 E-value=0.00016 Score=74.08 Aligned_cols=75 Identities=24% Similarity=0.374 Sum_probs=54.9
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCce
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (621)
|+||||+|+|++|++++|.++ ++...+.+++ ..+++++++.+.+.+++++++. ..+|.+|||+. .+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~-~l~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~-pG- 67 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR-LLSKVVVPTP--------KEGGERVAEALAEAAERAEREA---GVRGEAIGLGT-PG- 67 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS-BSCCEEEECC--------SSCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE-SS-
T ss_pred EEEEEEEcCCEEEEEEEeCCC-cEEEEEEcCC--------CCChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe-cc-
Confidence 799999999999999999884 5566566654 3455889999999999988764 35677777732 34
Q ss_pred EEecCC-CCce
Q 007010 136 VAVDAD-GSPV 145 (621)
Q Consensus 136 v~vD~~-G~pl 145 (621)
++|.+ |...
T Consensus 68 -~vd~~~g~v~ 77 (302)
T 3vov_A 68 -PLDFRRGVIR 77 (302)
T ss_dssp -CEETTTTEEC
T ss_pred -cEeCCCCEEE
Confidence 45655 5443
No 38
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.25 E-value=0.00064 Score=68.38 Aligned_cols=72 Identities=21% Similarity=0.242 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeeccC-CCchhHHHHHHHHh
Q 007010 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPRE-NESVLLGAAILGAV 561 (621)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~-~e~~alGAA~lA~~ 561 (621)
++|++ +++++.++-.+.... .+. ..+++|+++||.++|+.+++.+++.+|+++.++.. .+.+|+|||++|..
T Consensus 182 ~~di~---a~~~~~v~~~l~~~~---~~~-~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~ 254 (276)
T 4ehu_A 182 IEDIV---AGIHTSVAKRVSSLV---KRI-GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFD 254 (276)
T ss_dssp HHHHH---HHHHHHHHHHHHHHH---HHH-CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHHHHHH---Hhc-ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHH
Confidence 45655 488888775544332 222 24578999999999999999999999999999874 56789999999864
No 39
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.20 E-value=0.0031 Score=65.55 Aligned_cols=75 Identities=21% Similarity=0.196 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcCEEEEecC-CCCCHHHHHHHHHhhC------CceeeccCC-Cc
Q 007010 480 DSSEKQLALLYLATVQGIAYGTRHIVEHC-NAHGHKIDTLLACGG-LAKNPLFLQQHADIIG------CPIILPREN-ES 550 (621)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~~l~~l-~~~g~~~~~I~~~GG-ga~s~~w~Qi~Advlg------~pV~~~~~~-e~ 550 (621)
...++|+++ +++.+|+..+..+.-.. ++.+ +++|+++|| .++|+..+++++..++ +++..++.+ -.
T Consensus 275 ~~~~eDIa~---gll~sVa~~I~~lA~l~A~~~~--i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~ 349 (360)
T 2i7n_A 275 SISKEDLAR---ATLVTITNNIGSIARMCALNEN--IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF 349 (360)
T ss_dssp TCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHT--CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCH
T ss_pred CCCHHHHHH---HHHHHHHHHHHHHHHHHHHHcC--CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHH
Confidence 446888765 99999999877764322 2234 347999999 9999999999999985 688877654 48
Q ss_pred hhHHHHHHH
Q 007010 551 VLLGAAILG 559 (621)
Q Consensus 551 ~alGAA~lA 559 (621)
+|+|||+.+
T Consensus 350 GAlGAaL~~ 358 (360)
T 2i7n_A 350 GAVGALLEL 358 (360)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 899999875
No 40
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.08 E-value=0.0008 Score=67.65 Aligned_cols=64 Identities=13% Similarity=0.246 Sum_probs=47.6
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
|+||||+|||++|++++|++++++.....+. |.. ++ ...+.+++++++++....++..+++++.
T Consensus 2 ~~lGID~GsT~tk~av~d~~~~il~~~~~~~------g~~---~e----~a~~vl~~~~~~a~~~~~~~~~~a~t~~ 65 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGEDIVASETISS------GTG---TT----GPSRVLEKLYGKTGLAREDIKKVVVTGY 65 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEESC------CTT---SS----HHHHHHHHHHHHHCCCGGGEEEEEEEST
T ss_pred eEEEEEcCccEEEEEEEECCCeEEEEEEecC------CCC---HH----HHHHHHHHHHHHCCCcchhccccccCch
Confidence 7999999999999999999999987654433 111 11 1234577777777777788999998765
No 41
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.03 E-value=0.00078 Score=75.71 Aligned_cols=85 Identities=20% Similarity=0.259 Sum_probs=67.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~lA~ 560 (621)
++.++..+++.+++.+.-.+++.++...-....++.|+++||++++|.+.+++.+.||.++.... ..++.|+|||+.|+
T Consensus 301 tr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 301 TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHH
Confidence 57777777888888887777776664321123578999999999999999999999999987654 56788999999998
Q ss_pred hhcccc
Q 007010 561 VAAKRY 566 (621)
Q Consensus 561 ~a~G~~ 566 (621)
.-.|..
T Consensus 381 ~l~~~~ 386 (605)
T 4b9q_A 381 VLTGDV 386 (605)
T ss_dssp HHHTSS
T ss_pred HhcCCC
Confidence 766643
No 42
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.98 E-value=0.0013 Score=69.44 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh-CCceeec-cCCCchhHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILP-RENESVLLGAAILG 559 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl-g~pV~~~-~~~e~~alGAA~lA 559 (621)
++.++..+++..++.+.-.+++.++........++.|+++||+++.|.+.+++.+.| +.+|... +..++.|+|||+.|
T Consensus 311 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 311 TRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp EHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 567777777788888777666666654322235789999999999999999999999 8998776 46678899999998
Q ss_pred Hh
Q 007010 560 AV 561 (621)
Q Consensus 560 ~~ 561 (621)
+.
T Consensus 391 ~~ 392 (394)
T 3qfu_A 391 GV 392 (394)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 43
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=96.98 E-value=0.001 Score=67.61 Aligned_cols=65 Identities=22% Similarity=0.190 Sum_probs=47.9
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
++||||+|+|++|++++| +|+++.+.+.+... ....+++++++.+.++++++.. .+..+|.+|+|
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~-----~~~~~~~~~~~~i~~~i~~~~~---~~~~~i~~igi 65 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN-----PFQQDRNEIDTALRSEVLPAIG---QKASSIRAVYF 65 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCC-----TTTSCHHHHHHHHTTTTHHHHT---TSTTTCCEEEE
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCCC-----cccCCHHHHHHHHHHHHHHHhC---CCcccccEEEE
Confidence 479999999999999999 99999887664310 1134788888888888876542 23456777777
No 44
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=96.98 E-value=0.0016 Score=65.71 Aligned_cols=53 Identities=21% Similarity=0.321 Sum_probs=43.7
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHH
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACS 115 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~ 115 (621)
|+||||+|.|++|++++|.+|+++.+.+.+++ ...+++++++.+.+.++++++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~-------~~~~~~~~~~~i~~~i~~~~~ 54 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTP-------ASQTPEALRDALSALVSPLQA 54 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC-------SSCCHHHHHHHHHHHHTTTGG
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCC-------CCCCHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999988877764 123588888888888876654
No 45
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.97 E-value=0.002 Score=66.38 Aligned_cols=76 Identities=21% Similarity=0.367 Sum_probs=56.1
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.++||||+|.|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++..+.+ .+.+|||+. .+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~~-pG 90 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTP--------HTSYSAFLDAVCELVEEADQRFG----VKGSVGIGI-PG 90 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECC--------CSCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE-SS
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEEEEecCC--------CCCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe-ee
Confidence 589999999999999999999999988777664 12678888999999988876532 366666622 33
Q ss_pred eEEecCC-CCce
Q 007010 135 LVAVDAD-GSPV 145 (621)
Q Consensus 135 ~v~vD~~-G~pl 145 (621)
++|.+ |..+
T Consensus 91 --~vd~~~g~v~ 100 (327)
T 2ap1_A 91 --MPETEDGTLY 100 (327)
T ss_dssp --BSCCTTSCCB
T ss_pred --eEECCCCEEE
Confidence 34554 5444
No 46
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.91 E-value=0.0015 Score=69.47 Aligned_cols=83 Identities=17% Similarity=0.240 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh-CCceeecc-CCCchhHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl-g~pV~~~~-~~e~~alGAA~lA 559 (621)
++.++..+++.+++.+.-.+++.++........++.|+++||++++|.+.+++.+.| +.+|.... ..++.|+|||+.|
T Consensus 319 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 398 (404)
T 3i33_A 319 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 398 (404)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 566777667777777776666666654222236789999999999999999999999 88887764 5678899999999
Q ss_pred Hhhcc
Q 007010 560 AVAAK 564 (621)
Q Consensus 560 ~~a~G 564 (621)
+.-.|
T Consensus 399 ~~l~~ 403 (404)
T 3i33_A 399 AILIG 403 (404)
T ss_dssp HHHC-
T ss_pred HHhcC
Confidence 86443
No 47
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=96.90 E-value=0.0023 Score=69.13 Aligned_cols=73 Identities=16% Similarity=0.241 Sum_probs=50.9
Q ss_pred CCeEEEEecCccceeeEEEcCCCCE---EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCC--EEEEE
Q 007010 54 RSVFLGVDVGTGSARAGLFDESGKL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEE--VKGVG 128 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~g~v---v~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~--I~aIg 128 (621)
...+||||+|+|++|++++|.+|++ +...+.++|.. ...-+++++++.+.+++++.+++.+....+ +.||+
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~----~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi~ 135 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAM----STTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFT 135 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTT----TSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCc----cCCCCHHHHHHHHHHHHHHHHhhcccccccccceeeE
Confidence 3578999999999999999999988 44444444311 012267999999999999998764322222 44555
Q ss_pred Ec
Q 007010 129 FA 130 (621)
Q Consensus 129 is 130 (621)
++
T Consensus 136 fs 137 (457)
T 2yhx_A 136 FX 137 (457)
T ss_dssp CC
T ss_pred EE
Confidence 53
No 48
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.90 E-value=0.0015 Score=69.62 Aligned_cols=81 Identities=14% Similarity=0.175 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceee---------ccCCCchh
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIIL---------PRENESVL 552 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~---------~~~~e~~a 552 (621)
++.++..+++.+++.+.-.+++.++........++.|+++||++++|.+.+++.+.|+.++.+ .+..++.|
T Consensus 312 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava 391 (409)
T 4gni_A 312 NRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQA 391 (409)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHH
Confidence 567777677777777766666555543211235789999999999999999999999988533 34678899
Q ss_pred HHHHHHHHhh
Q 007010 553 LGAAILGAVA 562 (621)
Q Consensus 553 lGAA~lA~~a 562 (621)
+|||+.|+.-
T Consensus 392 ~GAa~~~~~~ 401 (409)
T 4gni_A 392 RGAALQASLI 401 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 9999998753
No 49
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=96.88 E-value=0.00054 Score=71.97 Aligned_cols=73 Identities=15% Similarity=0.192 Sum_probs=53.8
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEE-EeeeccccCCCccccCHHHHHHHHHH---HHHHHHHHcCCCCCCEEEEEEc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSA-SSPIQIWKEGDCIEQSSTDIWHAICA---AVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~-~~~~~~~~~~g~~eqd~~~~~~~~~~---~l~~~~~~~~~~~~~I~aIgis 130 (621)
.|+||||+|.|++|++++| +|+++.+. +.+++ .. +++++++.+.+ .++++++ .+|.+|||+
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~-------~~-~~~~~l~~i~~~~~~i~~~~~------~~i~gIGIa 73 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPAC-------AD-CLDKCLGNLVEGFKAIQAGLP------EAPVAISFA 73 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-TTEECSCCEEEECC-------TT-CHHHHHHHHHHHHHHHHTTCS------SCCCEEEEE
T ss_pred CEEEEEEECcceEEEEEEE-CCEEEEEEEEEECC-------CC-CHHHHHHHHHHHHHHHHHHhh------cCCeEEEEE
Confidence 6899999999999999999 99998876 66654 12 88888888887 4444321 578899984
Q ss_pred CCCceEEecCC-CCce
Q 007010 131 ATCSLVAVDAD-GSPV 145 (621)
Q Consensus 131 ~~~~~v~vD~~-G~pl 145 (621)
. .| ++|.+ |..+
T Consensus 74 v-PG--~Vd~~~G~i~ 86 (366)
T 3mcp_A 74 F-PG--PADYQAGIIG 86 (366)
T ss_dssp C-CS--SEETTTTEEC
T ss_pred e-cc--eEeCCCCEEE
Confidence 3 34 35654 6655
No 50
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.83 E-value=0.009 Score=60.30 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC-CCCCHHHHHHHHHh---hCCceeeccCCC-chhHH
Q 007010 480 DSSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG-LAKNPLFLQQHADI---IGCPIILPRENE-SVLLG 554 (621)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GG-ga~s~~w~Qi~Adv---lg~pV~~~~~~e-~~alG 554 (621)
...++|+++ +++.+|+..+..+.....+ ..++++|+++|| .+.|+.+++.+.+. ++.++.+++.++ .+|+|
T Consensus 206 g~~~eDIaa---sl~~sV~~~I~~la~~~a~-~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 206 DFTPSNKLA---AVIGVVGEVVTTMAITVAR-EFKTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCCHHHHHH---HHHHHHHHHHHHHHHHHHH-HTTCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCCHHHHHH---HHHHHHHHHHHHHHHHHHH-hCCCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 457889765 9999998777665443222 134558999999 89999999999998 589999887554 67999
Q ss_pred HHHHH
Q 007010 555 AAILG 559 (621)
Q Consensus 555 AA~lA 559 (621)
||+.|
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 51
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.65 E-value=0.0023 Score=67.36 Aligned_cols=80 Identities=21% Similarity=0.276 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~lA~ 560 (621)
+++++..+++..++.+.-.+++.++...-....++.|+++||+++.|.+.+.+.+.|+.+|.... ..++.|+|||+.|+
T Consensus 301 t~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 301 TRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp EHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTT
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHH
Confidence 56676666667777665544444433211123578999999999999999999999999987655 56788999999875
Q ss_pred h
Q 007010 561 V 561 (621)
Q Consensus 561 ~ 561 (621)
.
T Consensus 381 ~ 381 (383)
T 1dkg_D 381 V 381 (383)
T ss_dssp T
T ss_pred h
Confidence 3
No 52
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.56 E-value=0.0035 Score=62.65 Aligned_cols=61 Identities=18% Similarity=0.279 Sum_probs=45.2
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
++|+||+|.|++|.++||. ++++...+.+++ ....+++. ..++.+++..+.+..+|.+|+|
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~--------~~t~de~~----~~l~~ll~~~~~~~~~I~~iiI 63 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK--------VSTSDELG----IFLKSVLRENNCSPETIRKIAI 63 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-TEEEEEEEEECS--------CCCHHHHH----HHHHHHHHTTTCCGGGCCEEEE
T ss_pred eEEEEEECCCeEEEEEEEC-CEEEEEEEecCC--------CCCHHHHH----HHHHHHHHHcCCChhhceEEEE
Confidence 5899999999999999995 688877777664 24456654 3455666665556677999988
No 53
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.46 E-value=0.00064 Score=69.07 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=32.9
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
|+||||+|+|++|++++| +|+++.+.+.+.... ...+++++++.+.+++++++. ..+|.+|+|
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igi 63 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGINP-----FFQSEEEIQQKLTASLLPQLP-----EGKFNAVYF 63 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCCCT-----TTSCSTTTTTTTTC------------------CEE
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCCCc-----ccCCHHHHHHHHHHHHHHhcC-----cccccEEEE
Confidence 479999999999999999 999998876543211 112344455555555555432 235666776
No 54
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.31 E-value=0.0018 Score=63.32 Aligned_cols=65 Identities=9% Similarity=0.056 Sum_probs=41.1
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCS 134 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~ 134 (621)
.++||||+|+|++| ++|.+|++ ..+.+++ ...+++++.+.+.+.+ ++ .++.+|||+. .+
T Consensus 6 ~~~lgiDIGGT~i~--~~d~~g~~--~~~~~t~-------~~~~~~~~~~~i~~~i----~~-----~~i~gigi~~-pG 64 (226)
T 3lm2_A 6 QTVLAIDIGGSHVK--IGLSTDGE--ERKVESG-------KTMTGPEMVAAVTAMA----KD-----MTYDVIAMGY-PG 64 (226)
T ss_dssp CCEEEEEECSSEEE--EEETTTCC--EEEEECC-------TTCCHHHHHHHHHHHT----TT-----CCCSEEEEEE-SS
T ss_pred CEEEEEEECCCEEE--EEECCCCE--EEEEECC-------CCCCHHHHHHHHHHHH----Hh-----CCCCEEEEEE-Ee
Confidence 58999999999999 57888886 2344443 2356777766655544 32 1567777732 34
Q ss_pred eEEecCCC
Q 007010 135 LVAVDADG 142 (621)
Q Consensus 135 ~v~vD~~G 142 (621)
++|.++
T Consensus 65 --~Vd~~~ 70 (226)
T 3lm2_A 65 --PVVHNK 70 (226)
T ss_dssp --CEETTE
T ss_pred --EEECCe
Confidence 346544
No 55
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.27 E-value=0.0023 Score=67.58 Aligned_cols=68 Identities=7% Similarity=0.063 Sum_probs=44.8
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHH---HHHHHHHHHHcCCCCCCEEEEEE
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAI---CAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~---~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
+++||||+|+|++|++++|.+ +++.+.+.+++.... .+++++.+.+ .+.+.+++++.+....+|.+| +
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i 72 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSHSPDEL-----GRFQKILDQLEFREKIARQFVEETGYSLSSFSAF-V 72 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEECCHHHH-----HTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE-E
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeecccCcccc-----cchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE-E
Confidence 589999999999999999976 888887777642100 0112223333 666667766555444567777 5
No 56
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.26 E-value=0.0056 Score=61.89 Aligned_cols=69 Identities=16% Similarity=0.292 Sum_probs=48.6
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCCce
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSL 135 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~~~ 135 (621)
++||||+|.|++|++++|.+|+++.+.+.+++ .+++++.+.+.+.+++ .+|.+|||+. .+
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~---------~~~~~~~~~i~~~i~~---------~~i~gigi~~-pG- 64 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP---------ENLEDLLAWLDQRLSE---------QDYSGIAMSV-PG- 64 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC---------SSHHHHHHHHHHHHTT---------SCCSEEEEEE-SS-
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC---------CCHHHHHHHHHHHHHh---------CCCcEEEEEe-cC-
Confidence 58999999999999999999999987766542 3567776665555533 3577777732 44
Q ss_pred EEecCC-CCce
Q 007010 136 VAVDAD-GSPV 145 (621)
Q Consensus 136 v~vD~~-G~pl 145 (621)
++|.+ |..+
T Consensus 65 -~vd~~~g~v~ 74 (292)
T 2gup_A 65 -AVNQETGVID 74 (292)
T ss_dssp -EECTTTCBEE
T ss_pred -cccCCCCEEE
Confidence 45654 5444
No 57
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=96.25 E-value=0.013 Score=63.25 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=49.1
Q ss_pred CeEEEEecCccceeeEEEcCCC-CE---EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007010 55 SVFLGVDVGTGSARAGLFDESG-KL---LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g-~v---v~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (621)
..+||||+|+|++|+++++.+| +- +...+.++|.. ....+.+++++.+.+++.+.+++.+..... ..||++
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~~----~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~-~~lG~t 142 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAE----KMSGSGTELFKYIAETLADFLENNGMKDKK-FDLGFT 142 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTT----TTTSBHHHHHHHHHHHHHHHHHHTTCCSSC-EEEEEE
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCCc----ccCCCHHHHHHHHHHHHHHHHHhcCCCccc-cceEEE
Confidence 4789999999999999999888 51 11223333311 123467999999999999999876543333 556663
No 58
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=96.17 E-value=0.0031 Score=66.36 Aligned_cols=76 Identities=21% Similarity=0.137 Sum_probs=52.1
Q ss_pred CCeEEEEecCccceeeEEEcC----CCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 54 RSVFLGVDVGTGSARAGLFDE----SGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~----~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
+.|+||||+|+|++|++++|. +|+++...+. ++. .+++++.+.+.+.++++.... +.+|.+|||
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~~--------~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi 95 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MKR--------KDITEIIEFFNEIIELMPASV---MKRVKAGVI 95 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CTT--------CBGGGHHHHHHHHHHHSCHHH---HTTEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cCC--------CCHHHHHHHHHHHHHHHhhcc---cccccEEEE
Confidence 569999999999999999998 8988876541 220 356777777777776654321 246888877
Q ss_pred cCCCceEEecCCCCce
Q 007010 130 AATCSLVAVDADGSPV 145 (621)
Q Consensus 130 s~~~~~v~vD~~G~pl 145 (621)
+. .| ++|. |...
T Consensus 96 ~~-pG--~vd~-g~v~ 107 (373)
T 2q2r_A 96 NV-PG--PVTG-GAVG 107 (373)
T ss_dssp EE-SS--CEET-TTEE
T ss_pred Ee-ec--cccC-CEEe
Confidence 32 33 3455 5544
No 59
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.12 E-value=0.0071 Score=66.39 Aligned_cols=83 Identities=22% Similarity=0.239 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~lA~ 560 (621)
+++++..++...++.+.-.+++.++...-....++.|+++||+++.|.+.+.+.+.|+.++.... ..++.|+|||+.|+
T Consensus 270 tr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 270 TRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGG 349 (509)
T ss_dssp EHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHH
Confidence 56676666667777666555555554321113578999999999999999999999998876544 56788999999998
Q ss_pred hhcc
Q 007010 561 VAAK 564 (621)
Q Consensus 561 ~a~G 564 (621)
.-.|
T Consensus 350 ~l~~ 353 (509)
T 2v7y_A 350 VIAG 353 (509)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6544
No 60
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.06 E-value=0.01 Score=69.62 Aligned_cols=73 Identities=12% Similarity=0.195 Sum_probs=52.0
Q ss_pred CeEEEEecCccceeeEEEcCCCC----E-EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEE
Q 007010 55 SVFLGVDVGTGSARAGLFDESGK----L-LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEE-VKGVG 128 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~----v-v~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~-I~aIg 128 (621)
..+||||+|+|++|++++|.+|+ + +...+.++|.. ..+.+.+++++.+.+++.+++++.+...+. ..||+
T Consensus 78 G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~----~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~~~lGi~ 153 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPEN----IVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFT 153 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHH----HHSSBHHHHHHHHHHHHHHHHHHHTCTTSCCCEEEE
T ss_pred ceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCcc----cccCCHHHHHHHHHHHHHHHHHhcCCCCCcccEEEE
Confidence 47899999999999999998876 4 45555555421 012367899999999999998765432222 46777
Q ss_pred EcC
Q 007010 129 FAA 131 (621)
Q Consensus 129 is~ 131 (621)
++.
T Consensus 154 fs~ 156 (917)
T 1cza_N 154 FSF 156 (917)
T ss_dssp ECS
T ss_pred Ecc
Confidence 754
No 61
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=95.92 E-value=0.0083 Score=68.09 Aligned_cols=84 Identities=18% Similarity=0.298 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~lA~ 560 (621)
++.++..++..+++.+.-.++..++...-....++.|+++||+++.|.+.+++.+.||.++.... ..++.|+|||+.|+
T Consensus 302 tr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 302 SREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp EHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHH
Confidence 56777666666776666555555554321112578999999999999999999999999886644 67888999999998
Q ss_pred hhccc
Q 007010 561 VAAKR 565 (621)
Q Consensus 561 ~a~G~ 565 (621)
.-.|.
T Consensus 382 ~ls~~ 386 (675)
T 3d2f_A 382 IHSPT 386 (675)
T ss_dssp HTCSS
T ss_pred HhCCC
Confidence 75553
No 62
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=95.87 E-value=0.0085 Score=61.87 Aligned_cols=34 Identities=32% Similarity=0.293 Sum_probs=27.4
Q ss_pred CCCeEEEEecCccceeeEEEc-CCCCEEEEEEeee
Q 007010 53 SRSVFLGVDVGTGSARAGLFD-ESGKLLGSASSPI 86 (621)
Q Consensus 53 ~~~~~lgIDiGTtsiKa~l~d-~~g~vv~~~~~~~ 86 (621)
+|.|+||||+|.|++|++++| .+|+++...+.++
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~ 46 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKTYSG 46 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred CCCEEEEEEechhheEEEEEECCCCcEEEEEEecC
Confidence 357999999999999999999 5899887655544
No 63
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.49 E-value=0.027 Score=62.60 Aligned_cols=77 Identities=22% Similarity=0.320 Sum_probs=54.6
Q ss_pred CeEEEEecCccceeeEEEc-CCCCEEEEEEeeecccc-CCC------cccc---CHHHH----HHHHHHHHHHHHHHcCC
Q 007010 55 SVFLGVDVGTGSARAGLFD-ESGKLLGSASSPIQIWK-EGD------CIEQ---SSTDI----WHAICAAVDSACSLANV 119 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d-~~g~vv~~~~~~~~~~~-~~g------~~eq---d~~~~----~~~~~~~l~~~~~~~~~ 119 (621)
.|-|+||||||.+.+.++| .+|+++++.+.-.+... ..+ ++.+ ..+++ .+.+.+.+.+++++.++
T Consensus 206 ~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i 285 (631)
T 3zyy_X 206 VFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGV 285 (631)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5889999999999999999 68999999888766432 111 2211 12333 44444555555566689
Q ss_pred CCCCEEEEEEcC
Q 007010 120 DGEEVKGVGFAA 131 (621)
Q Consensus 120 ~~~~I~aIgis~ 131 (621)
++++|..|.|++
T Consensus 286 ~~~~I~~~~v~G 297 (631)
T 3zyy_X 286 EKKEIMAAVVAG 297 (631)
T ss_dssp CGGGEEEEEEEE
T ss_pred CHHHeeEEEEEc
Confidence 999999999976
No 64
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.45 E-value=0.019 Score=56.83 Aligned_cols=59 Identities=20% Similarity=0.365 Sum_probs=42.5
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
.+|+||+|.|++|.++|| +++++...+.+++ ..+..+++...+.+.++. ...+|.+|.|
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~-------~~~t~de~~~~l~~l~~~-------~~~~i~~i~I 62 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLSTG-------VFQTEDELFSHLHPLLGD-------AMREIKGIGV 62 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEECC-------TTCCHHHHHHHHHHHHGG-------GGGGEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecCC-------CCCCHHHHHHHHHHHHhh-------ccccCCEEEE
Confidence 579999999999999998 5677777666664 235567777665555433 2356888888
No 65
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.41 E-value=0.018 Score=63.76 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhC-Cceeec-cCCCchhHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILP-RENESVLLGAAILG 559 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg-~pV~~~-~~~e~~alGAA~lA 559 (621)
++.++..+...+++.+.-.+++.++...-....++.|+++||+++.|.+.+++.+.|+ .++... +..++.|+|||+.|
T Consensus 298 tr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a 377 (554)
T 1yuw_A 298 TRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 377 (554)
T ss_dssp EHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHH
Confidence 4556555555566655544444444321011357899999999999999999999996 777654 46678899999999
Q ss_pred Hhhcc
Q 007010 560 AVAAK 564 (621)
Q Consensus 560 ~~a~G 564 (621)
+.-.|
T Consensus 378 ~~l~~ 382 (554)
T 1yuw_A 378 AILSG 382 (554)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 86555
No 66
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=95.25 E-value=0.044 Score=59.31 Aligned_cols=72 Identities=22% Similarity=0.381 Sum_probs=46.8
Q ss_pred CeEEEEecCccceeeEEEcCCCCE-EEEEEeeeccccCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEE
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKL-LGSASSPIQIWKEGDCI-EQSSTDIWHAICAAVDSACSLANVDG-EEVKGVGF 129 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~v-v~~~~~~~~~~~~~g~~-eqd~~~~~~~~~~~l~~~~~~~~~~~-~~I~aIgi 129 (621)
..+|+||+|+|++|+++++.+|+- ....+..+++ |... .-+.+++++.+.+++.+.+++..... .+...+|+
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I---p~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGf 154 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL---PDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGF 154 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC---CTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEE
T ss_pred eEEEEEEecCCeEEEEEEEECCCCceEEEEEEEec---CchhccCCHHHHHHHHHHHHHHHHHHhcccccccccceEE
Confidence 479999999999999999977651 1111222221 1112 22478999999999999998754321 34445665
No 67
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.00 E-value=0.019 Score=59.30 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C-c-CEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGH----K-I-DTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLG 554 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~----~-~-~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alG 554 (621)
+++++..+++..++.+.-.+++.++ +.+. . + +.|+++||+++.|.+.+.+.+.|+.||.+.. ..+++++|
T Consensus 242 ~~~~~~~~~~~~~~~i~~~i~~~l~---~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~G 318 (344)
T 1jce_A 242 KGGEVREALRSVVVAIVESVRTTLE---KTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKG 318 (344)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHH---TSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHH---hCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHH
Confidence 4566666666666666655554444 3221 1 2 5799999999999999999999999998875 56788999
Q ss_pred HHHHHH
Q 007010 555 AAILGA 560 (621)
Q Consensus 555 AA~lA~ 560 (621)
||++|.
T Consensus 319 aa~~a~ 324 (344)
T 1jce_A 319 AGMVLD 324 (344)
T ss_dssp HHHGGG
T ss_pred HHHHHh
Confidence 998875
No 68
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=94.91 E-value=0.0071 Score=67.83 Aligned_cols=83 Identities=20% Similarity=0.271 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc-CCCchhHHHHHHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~lA~ 560 (621)
++.++..++..+++.+.-.+++.++...-....++.|+++||+++.|.+.+++.+.||.++.... ..++.|+|||+.|+
T Consensus 301 tr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~ 380 (605)
T 2kho_A 301 TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHT
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHH
Confidence 45555443334444443333333332211123678999999999999999999999998876544 56788999999997
Q ss_pred hhcc
Q 007010 561 VAAK 564 (621)
Q Consensus 561 ~a~G 564 (621)
.-.|
T Consensus 381 ~l~~ 384 (605)
T 2kho_A 381 VLTG 384 (605)
T ss_dssp TTTT
T ss_pred HhcC
Confidence 6544
No 69
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=94.83 E-value=0.051 Score=54.27 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=43.2
Q ss_pred EEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 57 ~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
+|.||+|.|++|.++|| +++++...+.+++ .....+++... ++++++..+.+..+|.+|.+
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~-------~~~t~de~~~~----l~~ll~~~~~~~~~i~~iiI 62 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMETD-------RHKTEDEYGML----VKQLLEHEGLSFEDVKGIIV 62 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECC-------TTCCHHHHHHH----HHHHHHHTTCCGGGCCEEEE
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecCC-------CcCCHHHHHHH----HHHHHHHcCCCcccCcEEEE
Confidence 68999999999999998 5677777666654 23456666654 44555555555567888888
No 70
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=94.66 E-value=0.068 Score=62.71 Aligned_cols=74 Identities=19% Similarity=0.329 Sum_probs=50.7
Q ss_pred CCeEEEEecCccceeeEEEcCC-CC--EEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007010 54 RSVFLGVDVGTGSARAGLFDES-GK--LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~-g~--vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (621)
...+||||+|+|++|+++++.+ |+ ++...+..+.+-.. ...-+.+++|+.+.+++.+.++..+...+.+ .||++
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~ip~~--~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l-~lG~t 601 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIE--IMQGTGEELFDHIVSCISDFLDYMGIKGPRM-PLGFT 601 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECCCHH--HHTSBHHHHHHHHHHHHHHHHHHHTCCSSCC-EEEEE
T ss_pred ceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEecCcc--cccCCHHHHHHHHHHHHHHHHHHcCCCccce-eEEEE
Confidence 3578999999999999999975 64 66544444331110 0123568999999999999998755444444 56664
No 71
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.69 E-value=0.14 Score=53.46 Aligned_cols=64 Identities=11% Similarity=0.006 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc
Q 007010 483 EKQLALLYLATVQGIAYGTRHIVEHCNA-H-GHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR 546 (621)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~l~~l~~-~-g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~ 546 (621)
++++.++.+..++.++-.+++.++.+.. . ...++.|+++||+++.+.+.+++++.|+.||.+..
T Consensus 273 ~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~ 338 (377)
T 2ych_A 273 PGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVN 338 (377)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecC
Confidence 3445556678889898888888886532 2 34789999999999999999999999999998863
No 72
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=93.67 E-value=0.055 Score=57.74 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCCcCEEEEecCCCCCHHHHHHHHHhhCCceeecc
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNA------HGHKIDTLLACGGLAKNPLFLQQHADIIGCPIILPR 546 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~------~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~ 546 (621)
++.++.++.++.+|-+.-.+++.++...- ....++.|+++||+|+-|.+.+++++.||+||++..
T Consensus 290 s~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 290 TAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 46777878889999998888888876642 123567899999999999999999999999998754
No 73
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=93.37 E-value=0.21 Score=51.38 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---CCceeecc----CCCchhHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLG 554 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---g~pV~~~~----~~e~~alG 554 (621)
.+++++. ++.+.++-.+.+.++.+.+. ...++|.++||.+.|..+++.+.+.+ |.+|.+++ ...+.++|
T Consensus 216 ~~~diAa---~fq~~l~~~l~~~~~~~~~~-~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG 291 (330)
T 2ivn_A 216 RVEDLAY---SFQETAFAALVEVTERAVAH-TEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIA 291 (330)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHH-hCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHH
Confidence 3566654 77777776666665554331 23578999999999999999999887 78887765 34566889
Q ss_pred HHHHHHhhccccC
Q 007010 555 AAILGAVAAKRYS 567 (621)
Q Consensus 555 AA~lA~~a~G~~~ 567 (621)
+|....+..|...
T Consensus 292 ~a~~~~~~~~~~~ 304 (330)
T 2ivn_A 292 YTGLRMYKAGISF 304 (330)
T ss_dssp HHHHHHHHTTCCC
T ss_pred HHHHHHHhcCCCC
Confidence 8876655555443
No 74
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=93.37 E-value=0.25 Score=51.18 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhC-CceeeccCC----C-chhHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-CPIILPREN----E-SVLLGA 555 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg-~pV~~~~~~----e-~~alGA 555 (621)
+++|..+ -+.|-.|-.+.+.++.+. .++++|+++|||++|+.+++.++..+. .+|...+.. + --|+.-
T Consensus 257 s~~Dv~A---TLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aF 330 (371)
T 3qbx_A 257 PAADIQA---TLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAF 330 (371)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHH
Confidence 5677653 667766666666555442 356899999999999999999999984 777765431 1 225566
Q ss_pred HHHHHhhc
Q 007010 556 AILGAVAA 563 (621)
Q Consensus 556 A~lA~~a~ 563 (621)
|++|...+
T Consensus 331 A~LA~~~l 338 (371)
T 3qbx_A 331 AWLAHRFL 338 (371)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67766553
No 75
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=93.12 E-value=0.35 Score=51.46 Aligned_cols=76 Identities=7% Similarity=0.059 Sum_probs=52.4
Q ss_pred CeEEEEecCccceeeEEEcC--CC-CEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007010 55 SVFLGVDVGTGSARAGLFDE--SG-KLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~--~g-~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (621)
++++||||||+++|+++... +| ++++....|..-. ..| .-.|.+..-+++.++++++=+.++..-.+=..+++++
T Consensus 8 ~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv-~~G-~I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~g 85 (419)
T 4a2a_A 8 VFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGL-DEG-EIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSS 85 (419)
T ss_dssp CEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSE-ETT-EESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEECC
T ss_pred CEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCe-eCC-EEEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEcC
Confidence 68999999999999999973 23 6777766653211 333 3458888888888888887655665444414577766
Q ss_pred C
Q 007010 132 T 132 (621)
Q Consensus 132 ~ 132 (621)
.
T Consensus 86 ~ 86 (419)
T 4a2a_A 86 V 86 (419)
T ss_dssp T
T ss_pred C
Confidence 5
No 76
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.66 E-value=0.28 Score=51.06 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=43.8
Q ss_pred CeEEEEecCccceeeEEEcCCCC--EEEEEEeeecccc-CCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGK--LLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAA 131 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~--vv~~~~~~~~~~~-~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~ 131 (621)
+.++|||+||+++|++++. +|+ +......++|... ..|. -.|++.+.+++.+++++ .+....+ ..+++++
T Consensus 13 ~~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~~g~-i~d~~~~~~~ik~~~~~----~~~~~~~-v~~~i~~ 85 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLMEGM-VAEPAALAQEIKELLLE----ARTRKRY-VVTALSN 85 (377)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEETTE-ESCHHHHHHHHHHHHHH----HTCCCCE-EEEEECG
T ss_pred CceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCcccCCC-cCCHHHHHHHHHHHHHH----cCCCcce-EEEEecC
Confidence 4689999999999999996 555 5445555555322 3332 35787777666655554 4443333 3466654
Q ss_pred C
Q 007010 132 T 132 (621)
Q Consensus 132 ~ 132 (621)
.
T Consensus 86 ~ 86 (377)
T 2ych_A 86 L 86 (377)
T ss_dssp G
T ss_pred C
Confidence 3
No 77
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.45 E-value=0.42 Score=49.16 Aligned_cols=82 Identities=15% Similarity=0.132 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---CCceeecc----CCCchhHHH
Q 007010 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLGA 555 (621)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---g~pV~~~~----~~e~~alGA 555 (621)
+.+++. ++.+.++-.+.+.+....+. ..+++|.++||.+.|..+++.+.+.+ |.+|.+++ .+.+.++|.
T Consensus 222 ~~diAa---sfq~~l~~~l~~~~~~a~~~-~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~ 297 (334)
T 3eno_A 222 IEDISY---SIQETAFAMLVEVLERALYV-SGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQ 297 (334)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHH-cCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHH
Confidence 456654 66777766666655544331 23578999999999999999999988 88888765 356778899
Q ss_pred HHHHHhhccccCC
Q 007010 556 AILGAVAAKRYSS 568 (621)
Q Consensus 556 A~lA~~a~G~~~s 568 (621)
|....+-.|...+
T Consensus 298 a~~~~~~~g~~~~ 310 (334)
T 3eno_A 298 AALLMYKSGVRMS 310 (334)
T ss_dssp HHHHHHHTTCCCC
T ss_pred HHHHHHHcCCCCC
Confidence 8777666666544
No 78
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=91.64 E-value=0.45 Score=49.32 Aligned_cols=78 Identities=19% Similarity=0.307 Sum_probs=53.4
Q ss_pred CCCCeEEEEecCcc--ceeeEEEcCCCC---EEEEEEeeeccc------c--CCCcccc-----CHHHHHHHHHHHHHHH
Q 007010 52 RSRSVFLGVDVGTG--SARAGLFDESGK---LLGSASSPIQIW------K--EGDCIEQ-----SSTDIWHAICAAVDSA 113 (621)
Q Consensus 52 m~~~~~lgIDiGTt--siKa~l~d~~g~---vv~~~~~~~~~~------~--~~g~~eq-----d~~~~~~~~~~~l~~~ 113 (621)
|+..++||+=.||| +|-+++++-+|+ ++.....||+.. . .++..+. =-.++=+...++++++
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~ 81 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNL 81 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55568999999997 789999997654 777888888621 1 1111110 0112334455777788
Q ss_pred HHHcCCCCCCEEEEEE
Q 007010 114 CSLANVDGEEVKGVGF 129 (621)
Q Consensus 114 ~~~~~~~~~~I~aIgi 129 (621)
+++.++++++|.+||.
T Consensus 82 l~~~~~~~~~i~~IGs 97 (370)
T 3cqy_A 82 LAKTKIAKDEIIAIGS 97 (370)
T ss_dssp HHHHCCCGGGEEEEEE
T ss_pred HHHcCCCcccccEEEe
Confidence 8888888899999999
No 79
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=91.62 E-value=0.57 Score=52.40 Aligned_cols=77 Identities=22% Similarity=0.358 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh-CCceeecc----CCCchhHHH
Q 007010 481 SSEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPR----ENESVLLGA 555 (621)
Q Consensus 481 ~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl-g~pV~~~~----~~e~~alGA 555 (621)
..+++++. ++.++++-.+.+..+.+.+. ..+++|.++||.+.|..+++.+...+ |.+|..+. ...+.++|-
T Consensus 570 ~~~~dIAa---sFh~ala~~L~~~~~ra~~~-~g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQ 645 (657)
T 3ttc_A 570 APVNQRAW---AFHDALAQGFAALMREQATM-RGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQ 645 (657)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHHHT-TTCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHHHH-cCCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHH
Confidence 35667654 88888887777776665442 34679999999999999999999998 88887643 456678999
Q ss_pred HHHHHh
Q 007010 556 AILGAV 561 (621)
Q Consensus 556 A~lA~~ 561 (621)
|++|+.
T Consensus 646 A~~a~~ 651 (657)
T 3ttc_A 646 GVIAAA 651 (657)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998853
No 80
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=91.61 E-value=0.57 Score=48.04 Aligned_cols=73 Identities=16% Similarity=0.248 Sum_probs=50.3
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccc-cCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIE-QSSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~e-qd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (621)
++||||.++..+++++++. |+++.....++. ....|... .....=.+.+..++++++++++++..+|.+|+++
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~-~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~ 75 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLT-TEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFS 75 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECC-CTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEE
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEee-cccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEE
Confidence 5899999999999999974 588866555432 11223221 1122234456678888888888888999999884
No 81
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=91.23 E-value=0.48 Score=54.07 Aligned_cols=77 Identities=13% Similarity=0.223 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---CCceeecc----CCCchhHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLG 554 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---g~pV~~~~----~~e~~alG 554 (621)
.+++++. ++.++++-.+.+....+.+. ..++.|.++||.+.|..+++.+...+ |.+|..+. ...+.++|
T Consensus 665 ~~~dIAa---sFq~ala~~L~~~~~~a~~~-~g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialG 740 (761)
T 3vth_A 665 EKSYISA---KFHNTVVNFTYDLANLIRKE-TGINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLG 740 (761)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHH-HCCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHH-hCCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHH
Confidence 3455543 66677766666655544331 23578999999999999999999887 78887755 44566899
Q ss_pred HHHHHHhh
Q 007010 555 AAILGAVA 562 (621)
Q Consensus 555 AA~lA~~a 562 (621)
.|++|...
T Consensus 741 QA~~a~~~ 748 (761)
T 3vth_A 741 QAVIANKI 748 (761)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988643
No 82
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=91.04 E-value=0.37 Score=49.58 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=54.5
Q ss_pred CCCCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCcccc-CHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEc
Q 007010 52 RSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQ-SSTDIWHAICAAVDSACSLANVDGEEVKGVGFA 130 (621)
Q Consensus 52 m~~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eq-d~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis 130 (621)
|.+.++||||-.+..+-++|++ +++++......+.. ...|.... ....=.+.+..++++++++++++..+|.+|+++
T Consensus 3 ~~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~~-~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 3 MDPMIVLGLEGTAHTISCGIID-ESRILAMESSMYRP-KTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp CCCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEECCC-SSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred ccCceEEEEECCCcCeEEEEEE-CCEEEEEEEEeecc-ccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4345799999999999999998 55787765443321 12233211 112233456778888888888889999999996
Q ss_pred CCCc
Q 007010 131 ATCS 134 (621)
Q Consensus 131 ~~~~ 134 (621)
..++
T Consensus 81 ~gPG 84 (334)
T 3eno_A 81 MGPG 84 (334)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 5443
No 83
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=90.33 E-value=0.44 Score=48.49 Aligned_cols=69 Identities=10% Similarity=0.145 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCC---ceeecc-CCCchhHHHHHHH
Q 007010 485 QLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC---PIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 485 ~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~---pV~~~~-~~e~~alGAA~lA 559 (621)
.+...+++.++.++-. +.+.+++. ..++.|+++||+|+ ++.+.+.+.++. ++.++. ..++.|+|+++++
T Consensus 247 ~~~~~i~~~~~~~~~~---i~~~i~~~-~~~~~vvl~GGga~--ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 247 IVTEAMNEALRKLEQR---VLNTLNEF-SGYTHVMVIGGGAE--LICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHTTC-CCCCEEEEESTTHH--HHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHhh-cCCCeEEEECChHH--HHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 3333444555555433 33334433 35789999999987 488999999998 576655 4668899999865
No 84
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=90.31 E-value=0.52 Score=53.93 Aligned_cols=81 Identities=20% Similarity=0.308 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---CCceeecc----CCCchhHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR----ENESVLLG 554 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---g~pV~~~~----~~e~~alG 554 (621)
.+.+++. ++.+.++-.+.+.+..+.+. ..+++|.++||.+.|..+++.+.+.+ |..|.++. ...+.|+|
T Consensus 677 ~~~dIAa---sfQ~al~~~L~~~~~~a~~~-tg~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALG 752 (772)
T 4g9i_A 677 SPADIAY---SAHLALARAFAHTAVERARE-FGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVG 752 (772)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHT-TTCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHH-hCcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHH
Confidence 4556554 56666655555555544432 34678999999999999999998875 56776643 45567999
Q ss_pred HHHHHHhhcccc
Q 007010 555 AAILGAVAAKRY 566 (621)
Q Consensus 555 AA~lA~~a~G~~ 566 (621)
.|++|+..+.-|
T Consensus 753 QA~iA~~~L~~~ 764 (772)
T 4g9i_A 753 QAFLGGLYLEGY 764 (772)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcc
Confidence 999998876544
No 85
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=89.68 E-value=0.86 Score=48.53 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=41.9
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeee--ccccCCCccccCHHHHHHHHHHHHHHHHHHcC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPI--QIWKEGDCIEQSSTDIWHAICAAVDSACSLAN 118 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~--~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~ 118 (621)
..||+||+|+|+.|+++++..|. +...+..+ |..... -..+++|+.+.++|.+.+++.+
T Consensus 59 G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ip~~~~~----g~~~~LFd~Ia~~i~~fl~~~~ 119 (445)
T 3hm8_A 59 GDFLALDLGGTNFRVLLVRVTTG-VQITSEIYSIPETVAQ----GSGQQLFDHIVDCIVDFQQKQG 119 (445)
T ss_dssp EEEEEEEESSSSEEEEEEEESSS-EEEEEEEECCCHHHHT----SBHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecCCeEEEEEEEECCc-eEEEEEEeccCccccC----CCHHHHHHHHHHHHHHHHHHhC
Confidence 47899999999999999997766 33223223 211111 1468899999999999887644
No 86
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=89.10 E-value=0.33 Score=49.48 Aligned_cols=31 Identities=19% Similarity=0.428 Sum_probs=22.2
Q ss_pred EEEEecCccceeeEEEcCCCCEEEEEEeeecc
Q 007010 57 FLGVDVGTGSARAGLFDESGKLLGSASSPIQI 88 (621)
Q Consensus 57 ~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~ 88 (621)
+||+|||+-++|+++++.+|++ ...+.+.|+
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~Pl 32 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEF-KVHHLYFPM 32 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCC-EEEEC----
T ss_pred eeEEEecccceeeeeecCCCce-EEEEEecCC
Confidence 7999999999999999989988 666676674
No 87
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=87.38 E-value=0.91 Score=48.69 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=42.7
Q ss_pred CeEEEEecCccceeeEEEcCCCC-----EEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGK-----LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLAN 118 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~-----vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~ 118 (621)
..||+||+|+||.|+++++..|. .+...+..+++-. ..-.-..+++|+.+.++|.+.+++.+
T Consensus 77 G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~--~l~~gt~~eLFd~IA~~i~~fl~~~~ 143 (470)
T 3f9m_A 77 GDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPE--DAMTGTAEMLFDYISECISDFLDKHQ 143 (470)
T ss_dssp EEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCH--HHHSSBHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCCh--HhccCCHHHHHHHHHHHHHHHHhhcc
Confidence 46899999999999999996443 3433333443211 01122578999999999999998754
No 88
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=87.02 E-value=1.8 Score=47.49 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=52.6
Q ss_pred CCCCCeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCH-HHHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 007010 51 ARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSS-TDIWHAICAAVDSACSLANVDGEEVKGVGF 129 (621)
Q Consensus 51 ~m~~~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~-~~~~~~~~~~l~~~~~~~~~~~~~I~aIgi 129 (621)
.|++.++||||-.+..+-++|++.+++++........ ...+|.+...+ ..=.+.+...+++++++ +...+|.+|++
T Consensus 2 ~m~~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~-~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~ 78 (540)
T 3en9_A 2 AMDPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYK-PPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAF 78 (540)
T ss_dssp -CCSCEEEEEECSSSEEEEEEEETTSCEEEEEEEECC-CCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEE
T ss_pred CcccceEEEEEcCccceEEEEEECCCeEEEEEEEeec-CCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEE
Confidence 3444589999999999999999987788887765432 11233332222 33355666777777776 56778999998
Q ss_pred cC
Q 007010 130 AA 131 (621)
Q Consensus 130 s~ 131 (621)
|.
T Consensus 79 ~~ 80 (540)
T 3en9_A 79 SQ 80 (540)
T ss_dssp EE
T ss_pred ec
Confidence 75
No 89
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=86.77 E-value=0.85 Score=45.77 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=21.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEE
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGS 81 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~ 81 (621)
.+.+|||+|+|.+|+++++ +++++..
T Consensus 20 ~~~iGIDiGsTt~K~V~~~-~~~i~~~ 45 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQ-DNQRTFK 45 (287)
T ss_dssp -CEEEEEECSSEEEEEEEC-SSCEEEE
T ss_pred CeEEEEEEChhhEEEEEEc-CCEEEEE
Confidence 3789999999999999994 6777755
No 90
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=86.37 E-value=1.4 Score=48.38 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCC-ceeecc--CCCchhHHHHHHH
Q 007010 483 EKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC-PIILPR--ENESVLLGAAILG 559 (621)
Q Consensus 483 ~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~-pV~~~~--~~e~~alGAA~lA 559 (621)
..+++. ++.+.++-.+.+.+..+.+. ..+++|.++||.+.|..+++.+....+. .|.++. ...+.++|+|+.+
T Consensus 280 ~~dIAa---sfQ~~l~~~L~~~~~~a~~~-tg~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a 355 (576)
T 3ven_A 280 YRDLAA---TAQAALERAVFGLADSVLAR-TGERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAV 355 (576)
T ss_dssp GHHHHH---HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHH-cCCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHH
Confidence 567665 55555554444544443321 2467999999999999999998887765 665543 4567789999998
Q ss_pred Hhhccc
Q 007010 560 AVAAKR 565 (621)
Q Consensus 560 ~~a~G~ 565 (621)
..-.|.
T Consensus 356 ~~~~g~ 361 (576)
T 3ven_A 356 AVELGD 361 (576)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 766554
No 91
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=85.27 E-value=0.75 Score=46.90 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=28.1
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeee
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPI 86 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~ 86 (621)
.++|+||-||||+|+-++|.+|+++.+.+.+-
T Consensus 7 ~~~IavDWGTSnlRa~l~~~~g~vl~~~~~~~ 38 (330)
T 3t69_A 7 GYYAAVDWGTSSFRLWIIGEDGAVLAERRSAE 38 (330)
T ss_dssp -CEEEEEECSSCEEEEEECTTSCEEEEEEESC
T ss_pred CCEEEEEecchheehheecCCCCchhhhcCCc
Confidence 57899999999999999999999999876654
No 92
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=85.14 E-value=1.7 Score=43.15 Aligned_cols=31 Identities=13% Similarity=0.279 Sum_probs=24.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEee
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSP 85 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~ 85 (621)
...|.||+|-|++|..+||.+++++...+..
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~~~~~~r~~ 53 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAARSVAGGLAE 53 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEES
T ss_pred CcEEEEEeCCCeeEEEEEeCCCEEEEEEEec
Confidence 4689999999999999998656676655543
No 93
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=85.10 E-value=0.79 Score=46.03 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=28.6
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeecc
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQI 88 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~ 88 (621)
.++|+||-||||.|+-++| +|+++.+.+.+..+
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g~vl~~~~~~~Gv 38 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GEECLESRQSEAGV 38 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TTEEEEEEEESCCT
T ss_pred ccEEEEEecchheeeeeec-CCceehhhcCCCch
Confidence 6899999999999999999 88999887776543
No 94
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=81.42 E-value=2.2 Score=43.35 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=38.3
Q ss_pred eEEEEecCccceeeEEEcC-CCC--EEEEEEeeecccc---CCCccccCHHHHHHHHHHHHHH---HHHHcCCCCCCEEE
Q 007010 56 VFLGVDVGTGSARAGLFDE-SGK--LLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDS---ACSLANVDGEEVKG 126 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~-~g~--vv~~~~~~~~~~~---~~g~~eqd~~~~~~~~~~~l~~---~~~~~~~~~~~I~a 126 (621)
.+.+||+||.++|..+++. ++. ++...+.+..+-. ..| ..+++.+ +..++++++ .++..+ ..+|.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g--~ls~eai-~r~~~~L~~f~~~~~~~~--v~~i~~ 87 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETG--RLQEDRI-EETIQVLKEYKKLIDEFK--VERVKA 87 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHS--SCCHHHH-HHHHHHHHHHHHHHHHTT--CSEEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccC--CcCHHHH-HHHHHHHHHHHHHHHHCC--CCeEEE
Confidence 5788999999999999994 442 3444444433221 112 2233333 333344443 334433 356777
Q ss_pred EEEcC
Q 007010 127 VGFAA 131 (621)
Q Consensus 127 Igis~ 131 (621)
++-++
T Consensus 88 vATsA 92 (315)
T 1t6c_A 88 VATEA 92 (315)
T ss_dssp EECHH
T ss_pred EEcHH
Confidence 76533
No 95
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=80.97 E-value=2.5 Score=46.00 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=47.2
Q ss_pred eeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--CCcCEEEEecCCCCCHHHHHHHHHhhCC-ceeec
Q 007010 472 GIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH---G--HKIDTLLACGGLAKNPLFLQQHADIIGC-PIILP 545 (621)
Q Consensus 472 g~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~---g--~~~~~I~~~GGga~s~~w~Qi~Advlg~-pV~~~ 545 (621)
..+..+...+.-+. .++.|--+.-..|-. ..++.+... + +.+..|+++||+|+-+-..++..++|+. +|++-
T Consensus 505 ~~L~~I~~R~~vEE-lelVR~~ak~~vfv~-n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiG 582 (607)
T 1nbw_A 505 GELVPIDNASPLEK-IRLVRRQAKEKVFVT-NCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAG 582 (607)
T ss_dssp TEEEEECCSSCHHH-HHHHHHHHHHHHHHH-HHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhH-HHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEe
Confidence 56667754444555 445555443333322 234544332 2 2458899999999999999999999999 88763
No 96
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=78.78 E-value=4 Score=41.39 Aligned_cols=72 Identities=14% Similarity=0.068 Sum_probs=40.0
Q ss_pred CeEEEEecCccceeeEEEcC-CCC--EEEEEEeeecccc---CCCccccCHHHHHHHHHHHHHH---HHHHcCCCCCCEE
Q 007010 55 SVFLGVDVGTGSARAGLFDE-SGK--LLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDS---ACSLANVDGEEVK 125 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~-~g~--vv~~~~~~~~~~~---~~g~~eqd~~~~~~~~~~~l~~---~~~~~~~~~~~I~ 125 (621)
+.+.+||+||.++|..+++. ++. ++...+.+..+-. ..| ..+++.+ +.+++++++ .++..+ ..+|.
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g--~ls~eai-~r~~~~L~~f~~~~~~~~--v~~v~ 78 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKG--FITEEAM-DRALDTLKKFRVILDEHA--VVHVI 78 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGT--CCCHHHH-HHHHHHHHHHHHHHHHTT--CCEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccC--CcCHHHH-HHHHHHHHHHHHHHHHcC--CCEEE
Confidence 35789999999999999984 343 3444444444322 112 2333333 333444443 444444 35677
Q ss_pred EEEEcC
Q 007010 126 GVGFAA 131 (621)
Q Consensus 126 aIgis~ 131 (621)
+++.++
T Consensus 79 ~vATsA 84 (315)
T 3mdq_A 79 ATGTSA 84 (315)
T ss_dssp EEECHH
T ss_pred EEeeHH
Confidence 777633
No 97
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=77.83 E-value=6.9 Score=40.77 Aligned_cols=46 Identities=13% Similarity=0.073 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCC-CCHHHHHHHHHh
Q 007010 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 537 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga-~s~~w~Qi~Adv 537 (621)
+-++|..+|.++..+-.+.- .| .++.|+++||.+ +++.+++.+.+-
T Consensus 300 ~la~d~f~yriak~Iga~aa~LG-~vDaIVfTGGIgEns~~vr~~I~~~ 347 (398)
T 4ijn_A 300 KLAYDVYIHRLRKYIGAYMAVLG-RTDVISFTAGVGENVPPVRRDALAG 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcEEEECCccccccHHHHHHHHHH
Confidence 46888889988877665543 33 689999999987 567677665543
No 98
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=76.68 E-value=3.1 Score=37.36 Aligned_cols=24 Identities=38% Similarity=0.480 Sum_probs=21.5
Q ss_pred eEEEEecCccceeeEEEcCCCCEE
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLL 79 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv 79 (621)
.+||||.|+..++.++.|..|.+.
T Consensus 4 riLGiDpG~~riGvAv~d~~g~~a 27 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGWTA 27 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSE
T ss_pred EEEEEEccCCEEEEEEEECCCCEE
Confidence 489999999999999999988753
No 99
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=76.02 E-value=6.3 Score=40.04 Aligned_cols=44 Identities=16% Similarity=0.199 Sum_probs=35.6
Q ss_pred cCEEEEecCCCCCHHHHHHHHHhhCCceeeccCC-CchhHHHHHHHH
Q 007010 515 IDTLLACGGLAKNPLFLQQHADIIGCPIILPREN-ESVLLGAAILGA 560 (621)
Q Consensus 515 ~~~I~~~GGga~s~~w~Qi~Advlg~pV~~~~~~-e~~alGAA~lA~ 560 (621)
++.|+++||||. ++.+.+.+.++.++.+++++ .+.|+|+..++.
T Consensus 279 ~~~IvltGGGA~--l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 279 LDSLIFIGGTTQ--KLKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp CSEEEEESTTHH--HHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred ccEEEEECChHH--HHHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 568999999997 56799999999899887754 477888876653
No 100
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=75.95 E-value=1.2 Score=46.80 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=18.8
Q ss_pred CCCCCCeEEEEecCccceeeEEEcCCCC
Q 007010 50 PARSRSVFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 50 ~~m~~~~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
+.|. +.++|||+|||+++++++ .+|+
T Consensus 9 ~~m~-~~vvGIDlGTt~s~va~~-~~g~ 34 (409)
T 4gni_A 9 APGE-RVVIGITFGNSNSSIAHT-VDDK 34 (409)
T ss_dssp -----CCEEEEEECSSEEEEEEE-ETTE
T ss_pred CCCC-CcEEEEEcCCCeEEEEEE-eCCc
Confidence 4454 579999999999999998 4553
No 101
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=74.00 E-value=5.7 Score=39.49 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh-CCceeeccCCCchhHHHHHHHHhh
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPRENESVLLGAAILGAVA 562 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl-g~pV~~~~~~e~~alGAA~lA~~a 562 (621)
.+++-.+..+...+..+... ..++.|++.||.++++.+.+.+-..+ ..+|..+...+++++|||.++...
T Consensus 218 ~il~~~~~~La~~i~~l~~~-l~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 218 DILKQGAELLASQAVYLARK-IGTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEECCccCcHHHHHHHHHHCCCCeEeccCCCCChHHHHHHHHHHh
Confidence 45555555444444433221 25678999999887766665555444 357777664467789999988654
No 102
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=73.68 E-value=11 Score=35.87 Aligned_cols=63 Identities=13% Similarity=0.264 Sum_probs=45.3
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
.+|+||-.|..+-+++++ +|+++...... . .+..+ .+...++++++++++...+|.+|+++..
T Consensus 3 ~iLaIdTS~~~~svAl~~-~~~~~~~~~~~-~--------~~Hs~----~L~p~i~~~L~~a~~~~~dld~Iav~~G 65 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-NDQVISRSEVA-P--------RDHTK----KVLPMVDEVLKEAGLTLQDLDALAFGRG 65 (213)
T ss_dssp CEEEEECSSSEEEEEEES-SSCEEEEEEEC-C--------SCCHH----HHHHHHHHHHHTTTCCTTTCSEEEEEEE
T ss_pred EEEEEEccCcceEEEEEE-CCEEEEEEEec-h--------HHHHH----HHHHHHHHHHHHcCCCHHHccEEEEecC
Confidence 489999999999999997 47877653211 1 12233 3445677788888888899999999644
No 103
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=73.67 E-value=7.1 Score=44.52 Aligned_cols=54 Identities=24% Similarity=0.447 Sum_probs=37.5
Q ss_pred CCeEEEEecC-ccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHc
Q 007010 54 RSVFLGVDVG-TGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117 (621)
Q Consensus 54 ~~~~lgIDiG-TtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~ 117 (621)
.+.+||||-| .|++|++++|.+|+++..... |++.+ ..+ |+.....+.+++.+.
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i-y~~~~-----~~~----~~~~~~~l~~li~~~ 382 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATV-YPHAP-----KNQ----WDQTLAVLAALCAKH 382 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEE-CCSGG-----GCC----HHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEE-ecCCc-----hhH----HHHHHHHHHHHHHHc
Confidence 4579999999 699999999999999987664 33211 111 333445666777664
No 104
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=72.31 E-value=6.6 Score=42.66 Aligned_cols=74 Identities=15% Similarity=0.142 Sum_probs=43.9
Q ss_pred CeEEEEecCccceeeEEEcC-CC--CEEEEEEeeecccc---CCCccccCHHHHHHHHHHHHHHHHHHc-CCCCCCEEEE
Q 007010 55 SVFLGVDVGTGSARAGLFDE-SG--KLLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDSACSLA-NVDGEEVKGV 127 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~-~g--~vv~~~~~~~~~~~---~~g~~eqd~~~~~~~~~~~l~~~~~~~-~~~~~~I~aI 127 (621)
+.+.+||+||.|+|.++++. +| +++...+.++.+-. ..| ..+++ -.+..++++++..+.. +....+|.++
T Consensus 11 ~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g--~Ls~e-ai~r~~~~L~~f~~~~~~~~v~~v~~v 87 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDN--MLSEE-AMTRGLNCLSLFAERLQGFSPASVCIV 87 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTC--CBCHH-HHHHHHHHHHHHHHHTTTCCGGGEEEE
T ss_pred CeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccC--CcCHH-HHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46889999999999999994 44 34444455444322 222 23333 3344455666554443 2334678888
Q ss_pred EEcC
Q 007010 128 GFAA 131 (621)
Q Consensus 128 gis~ 131 (621)
|.++
T Consensus 88 ATsA 91 (513)
T 1u6z_A 88 GTHT 91 (513)
T ss_dssp ECHH
T ss_pred ecHH
Confidence 8865
No 105
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=71.86 E-value=4.3 Score=42.60 Aligned_cols=47 Identities=9% Similarity=0.143 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCC-CCHHHHHHHHHh
Q 007010 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 537 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga-~s~~w~Qi~Adv 537 (621)
+-++|-.+|.++..+-.+.. .+.+++.|+++||.. +++.+++.+.+-
T Consensus 315 ~lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~ 363 (415)
T 3sk3_A 315 KRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGK 363 (415)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhh
Confidence 36789999999888876654 566789999999977 677777766654
No 106
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=71.74 E-value=9.1 Score=39.54 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh-CCceeeccCC-----CchhHHH
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII-GCPIILPREN-----ESVLLGA 555 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl-g~pV~~~~~~-----e~~alGA 555 (621)
+++|..+ -+.|-.|..+.+.++.+ . ..++|+++|||++|+.+++.++..+ +.+|...+.- .--|+.-
T Consensus 264 ~~~Dv~A---TLt~~TA~sIa~~~~~~---~-~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF 336 (370)
T 3cqy_A 264 NEEDIQS---TLLDLTCHSIAQDILKL---A-QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF 336 (370)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHH---C-SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHhc---C-CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH
Confidence 4677653 67777776666666544 2 4568999999999999999999999 5577554321 1124455
Q ss_pred HHHHHhhc
Q 007010 556 AILGAVAA 563 (621)
Q Consensus 556 A~lA~~a~ 563 (621)
|++|...+
T Consensus 337 A~LA~~~l 344 (370)
T 3cqy_A 337 AWLAMRYQ 344 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 107
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=71.19 E-value=10 Score=41.26 Aligned_cols=61 Identities=15% Similarity=0.167 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---CCceeecc
Q 007010 482 SEKQLALLYLATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---GCPIILPR 546 (621)
Q Consensus 482 ~~~~~~~~~rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---g~pV~~~~ 546 (621)
.+.+++. ++.+.++-.+.+..+...+. ...++|.++||.+.|..+++.+...+ |.+|..++
T Consensus 220 ~~~~ia~---~fq~~~~~~l~~~~~~a~~~-~~~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~ 283 (540)
T 3en9_A 220 RLEDICY---SLQEYAFSMLTEITERALAH-TNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPP 283 (540)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHHH-HTCSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHH-hCCCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCC
Confidence 3556554 66666665555554443221 23578999999999999999999876 67888765
No 108
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=70.69 E-value=1.9 Score=47.43 Aligned_cols=25 Identities=36% Similarity=0.647 Sum_probs=20.9
Q ss_pred CCCCeEEEEecCccceeeEEEcCCCC
Q 007010 52 RSRSVFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 52 m~~~~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
|+|..+||||+|||+..+++++ +|+
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~-~g~ 25 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQ-HGK 25 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEEC-SSS
T ss_pred CCCCCEEEEEeCcccEEEEEEE-CCE
Confidence 6666789999999999999986 454
No 109
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=70.54 E-value=9.3 Score=41.42 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=41.8
Q ss_pred CCeEEEEecCccceeeEEEcCC-C--CEEEEEEeeecccc---CCCccccCHHHHHHHHHHHHHH---HHHHcCCCCCCE
Q 007010 54 RSVFLGVDVGTGSARAGLFDES-G--KLLGSASSPIQIWK---EGDCIEQSSTDIWHAICAAVDS---ACSLANVDGEEV 124 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~~-g--~vv~~~~~~~~~~~---~~g~~eqd~~~~~~~~~~~l~~---~~~~~~~~~~~I 124 (621)
.+.+-+||+||.|+|.++++.. + +++...+....+-. ..| ..+++.+ +..++++++ .++..+ ..+|
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g--~Ls~eai-~r~~~~L~~F~~~~~~~~--v~~v 88 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTG--RMHEEGV-TRALMALRRFHVLSEQAQ--AQKL 88 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHS--SCCHHHH-HHHHHHHHHHHHHHHHTT--CSEE
T ss_pred CCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccC--CcCHHHH-HHHHHHHHHHHHHHHhCC--CCeE
Confidence 3568899999999999999953 3 45555554443311 112 2233333 333344443 445544 4678
Q ss_pred EEEEEcC
Q 007010 125 KGVGFAA 131 (621)
Q Consensus 125 ~aIgis~ 131 (621)
.++|.++
T Consensus 89 ~~vATsA 95 (508)
T 3hi0_A 89 YVLATAA 95 (508)
T ss_dssp EEEECTH
T ss_pred EEEeeHH
Confidence 8777644
No 110
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=70.46 E-value=10 Score=36.53 Aligned_cols=63 Identities=14% Similarity=0.261 Sum_probs=44.0
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCC
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAAT 132 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~ 132 (621)
++|+||--+..+-+++++ +|+++... .... ....+. +..+++++++++++...+|.+|+++..
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~-~~~~--------~~h~~~----l~~~i~~~L~~a~~~~~did~Iav~~G 64 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF-ELCP--------REHTQR----ILPMVQEILAASGASLNEIDALAFGRG 64 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE-EECC--------SCCHHH----HHHHHHHHHHHTTCCGGGCSEEEEECC
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE-hhhh--------HHHHHH----HHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 589999999999999997 56666421 1111 122223 456677777888888899999999654
No 111
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=69.76 E-value=5.1 Score=41.11 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=38.9
Q ss_pred CeEEEEecCccceeeEEEcC--CCC--EEEEEEeeeccccCCCc---cccCHHHHHHHHHHHHHHHHHHcC-CCCCCEEE
Q 007010 55 SVFLGVDVGTGSARAGLFDE--SGK--LLGSASSPIQIWKEGDC---IEQSSTDIWHAICAAVDSACSLAN-VDGEEVKG 126 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~--~g~--vv~~~~~~~~~~~~~g~---~eqd~~~~~~~~~~~l~~~~~~~~-~~~~~I~a 126 (621)
+.+.+||+||.++|..+++. +|. ++...+.+..+ ..|. -..+++ -.+.+++++++..+... ....+|.+
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrL--g~g~~~~g~ls~e-ai~r~~~aL~~f~~~~~~~~v~~v~~ 92 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRL--GQDVDKTHRFADE-ALERAYVAAREFAGVIAEHPIDGLRF 92 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCT--TTTHHHHSSCCHH-HHHHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred CeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeC--CCCccccCCcCHH-HHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 46889999999999999994 343 23333333322 2221 122333 33444555555443321 22345666
Q ss_pred EEEc
Q 007010 127 VGFA 130 (621)
Q Consensus 127 Igis 130 (621)
++-+
T Consensus 93 vATs 96 (343)
T 3cer_A 93 VATS 96 (343)
T ss_dssp EECH
T ss_pred EecH
Confidence 6653
No 112
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=68.07 E-value=7.7 Score=37.06 Aligned_cols=65 Identities=12% Similarity=0.065 Sum_probs=44.7
Q ss_pred CeEEEEecCccceeeEEEcCCCCEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (621)
.++|+||-.|..+-+++++ +++++ +...... .+..+ .+...++++++++++...+|.+|+++...
T Consensus 12 ~~iLaidTS~~~~sval~~-~~~~l-~~~~~~~--------r~Hse----~L~p~i~~~L~~a~~~~~dld~Iav~~GP 76 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRK-GEDLF-EISYTGE--------KKHAE----ILPVVVKKLLDELDLKVKDLDVVGVGIGP 76 (218)
T ss_dssp -CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC--------GGGGG----HHHHHHHHHHHHHTCCGGGCSEEEEECCS
T ss_pred ceEEEEEcCCcCeEEEEEE-CCEEE-EEEecch--------HHHHH----HHHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 3689999999999999998 56676 3222211 11223 34456677777778888999999997553
No 113
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=67.73 E-value=11 Score=40.91 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=48.0
Q ss_pred eeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--CCcCEEEEecCCCCCHHHHHHHHHhhCC-ceeec
Q 007010 472 GIICGMTLDSSEKQLALLYLATVQGIAYGTRHIVEHCNAH---G--HKIDTLLACGGLAKNPLFLQQHADIIGC-PIILP 545 (621)
Q Consensus 472 g~f~Gl~~~~~~~~~~~~~rAvlEgia~~~r~~l~~l~~~---g--~~~~~I~~~GGga~s~~w~Qi~Advlg~-pV~~~ 545 (621)
..+..+...+.-+. .++.|--+.-..|-. ..++.+... + +.+..|+++||+|+-+-..++..++|+. +|++-
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv~-n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiG 580 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFVT-NALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAG 580 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHHH-HHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhH-HHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEe
Confidence 56667754444566 455555444343322 234444331 2 2458999999999999999999999999 98763
Q ss_pred c
Q 007010 546 R 546 (621)
Q Consensus 546 ~ 546 (621)
.
T Consensus 581 r 581 (610)
T 2d0o_A 581 R 581 (610)
T ss_dssp E
T ss_pred c
Confidence 3
No 114
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=67.71 E-value=21 Score=36.99 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCCC-CHHHHHHHHHh
Q 007010 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLAK-NPLFLQQHADI 537 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga~-s~~w~Qi~Adv 537 (621)
+-++|..+|.++..+-.+.- .| .++.|+++||... ++.+++.+.+-
T Consensus 291 ~lA~d~f~yri~k~Iga~aa~Lg-~vDaIVfTGGIgens~~vR~~i~~~ 338 (391)
T 3r9p_A 291 QLAYSVFTHRLRKYIGAYLAVLG-HTDVISFTAGIGENDAAVRRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHHH
Confidence 36789999998887765543 45 6899999999875 67777765543
No 115
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=67.14 E-value=3.7 Score=42.10 Aligned_cols=66 Identities=11% Similarity=0.105 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHH-HHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCCcee---eccCCCchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEH-CNAHGHKIDTLLACGGLAKNPLFLQQHADIIGCPII---LPRENESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~-l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~pV~---~~~~~e~~alGAA~lA 559 (621)
.+++.++-.+.+.++. |++..-.++.|+++||+|+- +.+.+.+.++.... ..+..++.|+|+..++
T Consensus 273 ~~i~~~~~~i~~~i~~~l~~~~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~ 342 (346)
T 2fsj_A 273 PILEDLANRIIENIRLNLRGEVDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAA 342 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHH
Confidence 4444444444443333 33321245889999999884 78888899884433 3234478899998764
No 116
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=66.87 E-value=3.9 Score=43.73 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=36.7
Q ss_pred CCeEEEEecCccceeeEEEcC-CC-----CEEEEEEeeeccccCCCc--cccCHHHHHHHHHHHHHHHHH
Q 007010 54 RSVFLGVDVGTGSARAGLFDE-SG-----KLLGSASSPIQIWKEGDC--IEQSSTDIWHAICAAVDSACS 115 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~-~g-----~vv~~~~~~~~~~~~~g~--~eqd~~~~~~~~~~~l~~~~~ 115 (621)
.+|.+.||+||+++|..|++- ++ .++.... ...+ ..+|. ...+|+.+.+.+..+++.+.+
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~-~~~~-~~~Gls~~~~~pe~~~~~l~~Ll~~a~~ 100 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHS-SCDV-QGGGISSYANDPSKAGQSLVRCLEQALR 100 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEE-EEEC-SSSCGGGGTTSTHHHHHHTHHHHHHHHH
T ss_pred ceEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeee-eeee-cccccccccCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999983 22 1332211 1111 02221 225788888877777776643
No 117
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=65.49 E-value=3 Score=43.28 Aligned_cols=22 Identities=27% Similarity=0.602 Sum_probs=18.7
Q ss_pred CeEEEEecCccceeeEEEcCCCC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
..++|||+|||++++++++ +|+
T Consensus 18 ~~viGID~GTt~s~va~~~-~g~ 39 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK-NGK 39 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC-SSC
T ss_pred CCEEEEEeCcCcEEEEEEE-CCe
Confidence 4689999999999999986 454
No 118
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=64.79 E-value=15 Score=36.46 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhC------Cceeecc-CCCchhHHHHHHHHhh
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG------CPIILPR-ENESVLLGAAILGAVA 562 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg------~pV~~~~-~~e~~alGAA~lA~~a 562 (621)
.+++-.+..+...+-.+... ..++.|++.||.++.+.+.+.+-..+. .+|+... ..++.++|||.++...
T Consensus 216 ~~~~~~~~~La~~i~~l~~~-~~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 216 RLITEFYTGICTGLYNLIYL-FDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 45555444444444333221 356889999998876655554444432 2455554 3567899999888653
No 119
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=64.37 E-value=34 Score=31.05 Aligned_cols=55 Identities=22% Similarity=0.199 Sum_probs=35.9
Q ss_pred eEEEEecCccceeeEEEcCCCC------EEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHc
Q 007010 56 VFLGVDVGTGSARAGLFDESGK------LLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~------vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~ 117 (621)
.+||||-|++.+=.+++|.+|+ .+......++ ...+..+=+..+.+.+.+++++.
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~-------~~~~~~~RL~~I~~~l~~~i~~~ 62 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTS-------PQEPAKERVGRIHARVLEVLHRF 62 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECC-------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCceEEEEEEecCCccceEEEEEeCeEECC-------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 4899999999999999997765 2333333332 12344444556666777777653
No 120
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=64.17 E-value=20 Score=36.23 Aligned_cols=73 Identities=16% Similarity=0.036 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcC--------EEEEecCCCCC-HHHHHH----HHHhh-------CCceeeccCCCc
Q 007010 491 LATVQGIAYGTRHIVEHCNAHGHKID--------TLLACGGLAKN-PLFLQQ----HADII-------GCPIILPRENES 550 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~~g~~~~--------~I~~~GGga~s-~~w~Qi----~Advl-------g~pV~~~~~~e~ 550 (621)
+.+++-.+..+...+..+... ..++ .|++.||.+++ +.+.+. +.... ..+|+.....++
T Consensus 235 ~~il~~~~~~La~~i~~l~~~-~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a 313 (347)
T 2ch5_A 235 RYIFRKAGEMLGRHIVAVLPE-IDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHS 313 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-SCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCC
Confidence 356666666666655554332 3455 78888888764 444332 22221 235665555557
Q ss_pred hhHHHHHHHHhhcc
Q 007010 551 VLLGAAILGAVAAK 564 (621)
Q Consensus 551 ~alGAA~lA~~a~G 564 (621)
+++|||.+|...++
T Consensus 314 ~~~GAa~la~~~~~ 327 (347)
T 2ch5_A 314 SALGGASLGARHIG 327 (347)
T ss_dssp THHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHhcC
Confidence 88999999876543
No 121
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=63.87 E-value=14 Score=37.16 Aligned_cols=69 Identities=22% Similarity=0.175 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC-HHHHHHHHHhh----------CCceeecc-CCCchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s-~~w~Qi~Advl----------g~pV~~~~-~~e~~alGAA~lA 559 (621)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+-+.+ ..+|.... ..++.++|||.++
T Consensus 239 ~~~~~~~~~La~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 239 AVWADIGTIIGESLVNIVRV-MDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 45555555555544444321 356889999998876 55554433322 23455555 3467789999987
Q ss_pred Hh
Q 007010 560 AV 561 (621)
Q Consensus 560 ~~ 561 (621)
..
T Consensus 318 ~~ 319 (321)
T 3r8e_A 318 ME 319 (321)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 122
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=62.54 E-value=4.8 Score=41.67 Aligned_cols=47 Identities=26% Similarity=0.353 Sum_probs=36.7
Q ss_pred cCEEEEecCCCCCHHHHHHHHHhhC--------Cceeecc-CCCchhHHHHHHHHh
Q 007010 515 IDTLLACGGLAKNPLFLQQHADIIG--------CPIILPR-ENESVLLGAAILGAV 561 (621)
Q Consensus 515 ~~~I~~~GGga~s~~w~Qi~Advlg--------~pV~~~~-~~e~~alGAA~lA~~ 561 (621)
.++|+++||+++-+-+.+.+.+-++ .+|..+. ...++.+|++++|..
T Consensus 294 ~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 294 YANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp HTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred HhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 3579999999999999999888776 3444433 456789999999973
No 123
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=62.03 E-value=9.7 Score=39.34 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=51.5
Q ss_pred CeEEEEecCcc--ceeeEEEcCCC--CEEEEEEeeeccc------c--CCCccccCH-------HHHHHHHHHHHHHHHH
Q 007010 55 SVFLGVDVGTG--SARAGLFDESG--KLLGSASSPIQIW------K--EGDCIEQSS-------TDIWHAICAAVDSACS 115 (621)
Q Consensus 55 ~~~lgIDiGTt--siKa~l~d~~g--~vv~~~~~~~~~~------~--~~g~~eqd~-------~~~~~~~~~~l~~~~~ 115 (621)
.++||+=.||| +|-+++++-+| +++.....||+.. . .++. .++ .++=+...++++++++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~~--~~~~~~~~l~~~lg~~~a~av~~~l~ 79 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGP--DEIARAAEVEQRWVALAAQGVRELLL 79 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCCB--THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999997 78888888655 5777777888621 1 1111 122 2233445577788888
Q ss_pred HcCCCCCCEEEEEEcC
Q 007010 116 LANVDGEEVKGVGFAA 131 (621)
Q Consensus 116 ~~~~~~~~I~aIgis~ 131 (621)
+.++++++|.+||.-+
T Consensus 80 ~~~~~~~~Id~IGsHG 95 (371)
T 3qbx_A 80 QQQMSPDEVRAIGSHG 95 (371)
T ss_dssp HTTCCGGGCCEEEECC
T ss_pred HcCCCcccccEEEeCC
Confidence 8888889999999933
No 124
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=60.32 E-value=20 Score=35.20 Aligned_cols=69 Identities=13% Similarity=0.103 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh------------CCceeecc-CCCchhHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII------------GCPIILPR-ENESVLLGAAIL 558 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl------------g~pV~~~~-~~e~~alGAA~l 558 (621)
.+++-.+..+...+..+... ..++.|++.||.+..+.+.+.+-..+ ..+|+... ..++.++|||.+
T Consensus 206 ~i~~~~~~~L~~~i~~l~~~-l~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~ 284 (292)
T 2gup_A 206 EAIERMNRNLAQGLLNIQYL-IDPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVN 284 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHH
Confidence 34444444444443333221 24678888888876665554333221 24566554 456788999988
Q ss_pred HHh
Q 007010 559 GAV 561 (621)
Q Consensus 559 A~~ 561 (621)
+..
T Consensus 285 ~~~ 287 (292)
T 2gup_A 285 WLQ 287 (292)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 125
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=59.76 E-value=15 Score=36.16 Aligned_cols=68 Identities=15% Similarity=0.250 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhC-------Cceeecc-CCCchhHHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIG-------CPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg-------~pV~~~~-~~e~~alGAA~lA~ 560 (621)
.+++-.+..+...+..+... ..++.|++.||.+.++.+.+.+...+. .+|..+. ..++.++|||.++.
T Consensus 212 ~i~~~~~~~L~~~i~~l~~~-l~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 212 QLIHRSARTLARLIADIKAT-TDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 44444444444444333221 246778888888766666555444332 3445544 35677899998864
No 126
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=58.59 E-value=3.4 Score=42.74 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=17.9
Q ss_pred eEEEEecCccceeeEEEcCCCC
Q 007010 56 VFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
.++|||+|||++++++++ +|+
T Consensus 3 ~~vGIDlGTt~s~va~~~-~g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD-GTT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEE-TTE
T ss_pred cEEEEEcCCCCEEEEEEE-CCe
Confidence 578999999999999986 453
No 127
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=58.32 E-value=11 Score=33.18 Aligned_cols=38 Identities=8% Similarity=0.192 Sum_probs=33.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCC
Q 007010 96 EQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (621)
Q Consensus 96 eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (621)
+.+++++++++.+++.+++++.++++++|.+|-+|.+.
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTK 80 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 46789999999999999999999999999999997653
No 128
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=57.89 E-value=30 Score=30.31 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=21.0
Q ss_pred CeEEEEecCccceeeEEEcCCCCE
Q 007010 55 SVFLGVDVGTGSARAGLFDESGKL 78 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~v 78 (621)
..+||||+|+..|=+++-|..+.+
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTTE
T ss_pred CeEEEEEeCCCEEEEEEEcCCCCE
Confidence 458999999999999999987754
No 129
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=57.26 E-value=20 Score=35.79 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCC-CHHHHHHHHHhh----------CCceeecc-CCCchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK-NPLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~-s~~w~Qi~Advl----------g~pV~~~~-~~e~~alGAA~lA 559 (621)
.+++-.+..+...+..+... ..++.|++.||.++ .+.+.+.+-..+ ..+|.... ..++.++|||.++
T Consensus 241 ~i~~~~~~~L~~~i~~l~~~-l~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 241 MVVDRVCFYLGLATGNLGNT-LNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
Confidence 55555555555544443321 24678989999875 565554433322 34566554 3457789999887
Q ss_pred Hh
Q 007010 560 AV 561 (621)
Q Consensus 560 ~~ 561 (621)
..
T Consensus 320 ~~ 321 (326)
T 2qm1_A 320 LQ 321 (326)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 130
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=56.76 E-value=13 Score=37.48 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---------CCceeecc-CCCchhHHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---------GCPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---------g~pV~~~~-~~e~~alGAA~lA~ 560 (621)
.+++-.+..+...+..+... ..++.|++.||.++.+.+.+.+-..+ ..+|.... ..++.++|||.++.
T Consensus 248 ~~~~~~~~~La~~i~~l~~~-l~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 248 EHVERFMELLAICFGNIFTA-NDPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 34444444444433333221 25678989898887665555444333 22344444 35677899998764
No 131
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=56.26 E-value=19 Score=36.18 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC-HHHHHHHHHhh-----------CCceeecc-CCCchhHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII-----------GCPIILPR-ENESVLLGAAIL 558 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s-~~w~Qi~Advl-----------g~pV~~~~-~~e~~alGAA~l 558 (621)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+-+.+ ..+|+... ..++.++|||.+
T Consensus 231 ~~~~~~~~~La~~i~~l~~~-l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l 309 (321)
T 3vgl_A 231 DSFRELARWAGAGLADLASL-FDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADL 309 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHH
Confidence 45555555555544444321 356789999998865 55443332221 12455555 456788999999
Q ss_pred HHhhcc
Q 007010 559 GAVAAK 564 (621)
Q Consensus 559 A~~a~G 564 (621)
+..++.
T Consensus 310 ~~~~~~ 315 (321)
T 3vgl_A 310 ARQGLE 315 (321)
T ss_dssp HHTC--
T ss_pred HHhhhh
Confidence 877653
No 132
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=55.94 E-value=38 Score=34.09 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhh---------CCceeeccCCCchhHHHHHHHHh
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADII---------GCPIILPRENESVLLGAAILGAV 561 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advl---------g~pV~~~~~~e~~alGAA~lA~~ 561 (621)
.+++-.+..+...+..+... ..++.|++.||.+ +.+.+.+...+ ..+|......+++++|||.++..
T Consensus 263 ~il~~~~~~La~~i~~l~~~-l~P~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 263 SILRTAGTALGLGVVNILHT-MNPSLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLD 338 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCSEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCCCchHHHHHHHHHH
Confidence 55665555555555444321 3567888888876 34433332211 35666665567778999988764
No 133
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=54.89 E-value=52 Score=29.52 Aligned_cols=54 Identities=22% Similarity=0.331 Sum_probs=34.0
Q ss_pred eEEEEecCccceeeEEEcCCCCEE---EEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHc
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLL---GSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLA 117 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv---~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~ 117 (621)
.+||||-|++++=.++++.+|+.+ ......++ ..+..+=+..+.+.+.+++++.
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~--------~~~~~~Rl~~i~~~l~~~i~~~ 58 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTK--------VDDLPSRLKLIYAGVTEIITQF 58 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECC--------CSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECC--------CCCHHHHHHHHHHHHHHHHHHc
Confidence 489999999999999999777632 33333332 1233333455666677777664
No 134
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=54.60 E-value=7.6 Score=39.09 Aligned_cols=23 Identities=13% Similarity=0.271 Sum_probs=19.8
Q ss_pred EEEEecCccceeeEEEcCCCCEE
Q 007010 57 FLGVDVGTGSARAGLFDESGKLL 79 (621)
Q Consensus 57 ~lgIDiGTtsiKa~l~d~~g~vv 79 (621)
.+|||+||+++|++..+.+|++.
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEE
T ss_pred eEEEecCCccceEEEecCCCEEE
Confidence 68999999999999877788753
No 135
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=54.45 E-value=14 Score=31.89 Aligned_cols=38 Identities=13% Similarity=0.124 Sum_probs=33.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEcCCC
Q 007010 96 EQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATC 133 (621)
Q Consensus 96 eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aIgis~~~ 133 (621)
+.+++++++++.+++.+++++.++++++|.+|-+|.+.
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T~ 51 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATP 51 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 46789999999999999999989999999999997653
No 136
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=54.44 E-value=6.1 Score=43.86 Aligned_cols=22 Identities=23% Similarity=0.540 Sum_probs=18.4
Q ss_pred CeEEEEecCccceeeEEEcCCCC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
..+||||+|||+.++++++ +|+
T Consensus 2 ~~viGIDlGTT~S~Va~~~-~g~ 23 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD-GTT 23 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE-TTE
T ss_pred CcEEEEEcCCCcEEEEEEE-CCE
Confidence 4689999999999999985 443
No 137
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=54.22 E-value=33 Score=35.90 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCC-CCHHHHHHHHHhh
Q 007010 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADII 538 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga-~s~~w~Qi~Advl 538 (621)
-++|-.+|.++..+-.+.. .| .++.|+++||.. +|+.+++.+.+-+
T Consensus 308 lA~d~f~yri~k~IGa~aa~Lg-gvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 308 LAIKTFVHRIARHIAGHAASLH-RLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCEEEECccccccCHHHHHHHHhhH
Confidence 5889999998887776654 43 589999999998 8999888777654
No 138
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=52.56 E-value=17 Score=31.06 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=33.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEEcCCC
Q 007010 96 EQSSTDIWHAICAAVDSACSLANVDG-EEVKGVGFAATC 133 (621)
Q Consensus 96 eqd~~~~~~~~~~~l~~~~~~~~~~~-~~I~aIgis~~~ 133 (621)
+.+++++++++.+++.+++++.++++ ++|.+|-+|.+.
T Consensus 13 ~n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T~ 51 (122)
T 1ufy_A 13 EDTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVTE 51 (122)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeCC
Confidence 46789999999999999999989999 999999997653
No 139
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=52.52 E-value=29 Score=35.61 Aligned_cols=19 Identities=21% Similarity=0.450 Sum_probs=17.7
Q ss_pred CeEEEEecCccceeeEEEc
Q 007010 55 SVFLGVDVGTGSARAGLFD 73 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d 73 (621)
.+++.||+||+++|..|++
T Consensus 3 ~~~avID~GSns~Rl~I~~ 21 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYS 21 (353)
T ss_dssp EEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEE
Confidence 4789999999999999998
No 140
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=51.63 E-value=13 Score=43.58 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=26.6
Q ss_pred CCeEEEEecCc-----cceeeEEEcCCCCEEEEEEe
Q 007010 54 RSVFLGVDVGT-----GSARAGLFDESGKLLGSASS 84 (621)
Q Consensus 54 ~~~~lgIDiGT-----tsiKa~l~d~~g~vv~~~~~ 84 (621)
.+.+||||-|- +.+|++++|.+|+++.....
T Consensus 518 ~~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 518 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CCCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 35799999984 48999999999999998766
No 141
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=51.33 E-value=56 Score=32.51 Aligned_cols=65 Identities=17% Similarity=0.226 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCH-----HHHHHHHHhhC-------Cceeecc-CCCchhHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNP-----LFLQQHADIIG-------CPIILPR-ENESVLLGAAIL 558 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~-----~w~Qi~Advlg-------~pV~~~~-~~e~~alGAA~l 558 (621)
.+++-++..+..++.. ..++.|++.||.++.. .+.+.+...+. .+|+... ..++.++|||.+
T Consensus 222 ~~~~~~a~~la~l~~~-----~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~l 296 (310)
T 3htv_A 222 SLLENAARAIATSINL-----FDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAIL 296 (310)
T ss_dssp HHHHHHHHHHHHHHHH-----HCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----hCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHH
Confidence 5566565555544443 3578888888888652 33333333332 2344433 357789999998
Q ss_pred HHh
Q 007010 559 GAV 561 (621)
Q Consensus 559 A~~ 561 (621)
+..
T Consensus 297 a~~ 299 (310)
T 3htv_A 297 AHQ 299 (310)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 142
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=50.26 E-value=49 Score=35.18 Aligned_cols=48 Identities=17% Similarity=0.254 Sum_probs=34.6
Q ss_pred CEEEEecCCCCCHHHHHHHH----Hhh--------CCceeeccCCCchhHHHHHHHHhhc
Q 007010 516 DTLLACGGLAKNPLFLQQHA----DII--------GCPIILPRENESVLLGAAILGAVAA 563 (621)
Q Consensus 516 ~~I~~~GGga~s~~w~Qi~A----dvl--------g~pV~~~~~~e~~alGAA~lA~~a~ 563 (621)
..|.+.||..+.|.+.+.+. +++ +.+|......+++.+|||++|+++.
T Consensus 385 ~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~ 444 (457)
T 2yhx_A 385 GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIAS 444 (457)
T ss_dssp EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHH
T ss_pred EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHh
Confidence 45666677734466665544 666 4467777789999999999999874
No 143
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=50.05 E-value=3.6 Score=39.59 Aligned_cols=22 Identities=41% Similarity=0.585 Sum_probs=10.8
Q ss_pred EEEecCccce--------eeEEEcCCCCEE
Q 007010 58 LGVDVGTGSA--------RAGLFDESGKLL 79 (621)
Q Consensus 58 lgIDiGTtsi--------Ka~l~d~~g~vv 79 (621)
=|+|+||.++ |+++||-+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDlDGTLv 38 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDLDGVIT 38 (250)
T ss_dssp ---------------CCCCEEEECTBTTTB
T ss_pred ccccCCCCCcccCccchhheeeecCCCccc
Confidence 3899999998 899999999875
No 144
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=49.78 E-value=18 Score=29.73 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=19.6
Q ss_pred EEEEecCccceeeEEEcCCCCE
Q 007010 57 FLGVDVGTGSARAGLFDESGKL 78 (621)
Q Consensus 57 ~lgIDiGTtsiKa~l~d~~g~v 78 (621)
+||||+|+..|=+++-|..+.+
T Consensus 3 iLglD~G~kriGvAvsd~~~~~ 24 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEGVPL 24 (98)
T ss_dssp EEEEEESSSEEEEEEECSCCSS
T ss_pred EEEEEeCCCEEEEEEEeCCCCe
Confidence 7999999999999999987643
No 145
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=49.58 E-value=7 Score=40.63 Aligned_cols=22 Identities=36% Similarity=0.675 Sum_probs=18.3
Q ss_pred CeEEEEecCccceeeEEEcCCCC
Q 007010 55 SVFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
..+||||+|||++++++++ +|+
T Consensus 23 ~~viGID~GTt~s~va~~~-~g~ 44 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQ-HGK 44 (404)
T ss_dssp CCCEEEEECSSEEEEEEEE-TTE
T ss_pred CCEEEEEcCCccEEEEEEE-CCe
Confidence 3589999999999999886 443
No 146
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=48.61 E-value=8.9 Score=41.49 Aligned_cols=19 Identities=21% Similarity=0.569 Sum_probs=16.9
Q ss_pred eEEEEecCccceeeEEEcC
Q 007010 56 VFLGVDVGTGSARAGLFDE 74 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~ 74 (621)
.++|||+|||++++++++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 5899999999999999863
No 147
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=48.60 E-value=30 Score=34.76 Aligned_cols=49 Identities=18% Similarity=0.248 Sum_probs=30.4
Q ss_pred CcCE-EEEecCCCCC--HH-----HHHHHHH------h-hCCceeeccCCCchhHHHHHHHHhh
Q 007010 514 KIDT-LLACGGLAKN--PL-----FLQQHAD------I-IGCPIILPRENESVLLGAAILGAVA 562 (621)
Q Consensus 514 ~~~~-I~~~GGga~s--~~-----w~Qi~Ad------v-lg~pV~~~~~~e~~alGAA~lA~~a 562 (621)
.++. |++.||.+.. ++ +.+.+.+ . -..||......++..+|||.++...
T Consensus 264 ~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~ 327 (332)
T 1sz2_A 264 GTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQT 327 (332)
T ss_dssp TCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHHHh
Confidence 4565 8888988764 22 2222221 1 2456776555678899999987643
No 148
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=46.60 E-value=39 Score=36.24 Aligned_cols=83 Identities=20% Similarity=0.304 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCCCcCEEEEecCCC-CCHHHHHHH----HHhh--------CCce
Q 007010 481 SSEKQLALLYLATVQGIAYGTRHIVE-----HCNAHGHKIDTLLACGGLA-KNPLFLQQH----ADII--------GCPI 542 (621)
Q Consensus 481 ~~~~~~~~~~rAvlEgia~~~r~~l~-----~l~~~g~~~~~I~~~GGga-~s~~w~Qi~----Advl--------g~pV 542 (621)
.+..| ..++|-+.+.|.-...+++- .+.+.+.+.-.|-+.|+.- +.|.+.+.+ .+++ +++|
T Consensus 372 ~t~~d-~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v 450 (485)
T 3o8m_A 372 TTVVE-RKLIRKLAELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPI 450 (485)
T ss_dssp CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSE
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceE
Confidence 44555 33566777766655444322 2233343333355567765 456555544 4444 4668
Q ss_pred eeccCCCchhHHHHHHHHhhcc
Q 007010 543 ILPRENESVLLGAAILGAVAAK 564 (621)
Q Consensus 543 ~~~~~~e~~alGAA~lA~~a~G 564 (621)
......+++.+|||++|+++..
T Consensus 451 ~l~~a~DGSg~GAAliAa~a~~ 472 (485)
T 3o8m_A 451 QLVAAEDGSGVGAAIIACLTQK 472 (485)
T ss_dssp EEEECCCTTTHHHHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHHHHH
Confidence 8777899999999999998763
No 149
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=46.51 E-value=44 Score=34.28 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC-HHHHHHHHHhh--------CCceeecc-CCCchhHHHHHHHHh
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII--------GCPIILPR-ENESVLLGAAILGAV 561 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s-~~w~Qi~Advl--------g~pV~~~~-~~e~~alGAA~lA~~ 561 (621)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+...+ ..+|+... ..++.++|||.++..
T Consensus 293 ~~l~~~~~~La~~i~~l~~~-ldP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~~ 371 (380)
T 2hoe_A 293 EYFDDIARYFSIGLLNLIHL-FGISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHALE 371 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 44444444444444333221 246788888888764 44444333222 24555554 346789999988754
No 150
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=46.10 E-value=34 Score=35.27 Aligned_cols=68 Identities=16% Similarity=0.274 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCCCCHH-HHHHHHHhhCC--ceee--ccCC-CchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLAKNPL-FLQQHADIIGC--PIIL--PREN-ESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga~s~~-w~Qi~Advlg~--pV~~--~~~~-e~~alGAA~lA 559 (621)
.+++-.+..+...+-.+.. .+..++.|++.||.+++.. +.+.+.+.+.. |+.+ .... ++.++|||.++
T Consensus 272 ~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 272 RVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 5666666666666555543 2236889999999886533 44444444332 4433 2222 36788998876
No 151
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=45.34 E-value=35 Score=37.10 Aligned_cols=67 Identities=19% Similarity=0.211 Sum_probs=40.2
Q ss_pred CCeEEEEecCccceeeEEEc--CCCCE--EEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 007010 54 RSVFLGVDVGTGSARAGLFD--ESGKL--LGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGV 127 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d--~~g~v--v~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~~~~I~aI 127 (621)
|+|+.|||||.+++-+++-+ .+|++ +.+...++. .-.| ..++. ..+..++++++++.+.+.+++.-|
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~tt--g~kg-t~~n~----~g~~~~l~~~~~~~~~~~~~~~li 71 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAETT--GIKG-TLRNV----FGIQEALALVARGAGIAVSDISLI 71 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECC--SSTT-STTHH----HHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeeccccccC--CccC-cHHHH----HHHHHHHHHHHHHcCCChhhceee
Confidence 47999999998888877755 34654 444444442 2222 12333 445566667777666666666553
No 152
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=43.92 E-value=29 Score=34.16 Aligned_cols=70 Identities=11% Similarity=-0.135 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC--HHHHHHHHHhhCCceeeccCCCchhHHHHHHHHhhccc
Q 007010 491 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN--PLFLQQHADIIGCPIILPRENESVLLGAAILGAVAAKR 565 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s--~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~a~G~ 565 (621)
+.+++-.+..+...+ .+. .-.+++.|++.||.+++ +.+.+.+... ..++..+ .++...||+.+|....++
T Consensus 213 ~~i~~~~~~~La~~i-~~~-~~~~p~~vvlgGGv~~~~~~~l~~~l~~~-~~~i~~~--~~a~~~GA~~la~~~~~~ 284 (291)
T 1zbs_A 213 YSLVQNSFDDFLVRN-VLR-YNRPDLPLHFIGSVAFHYREVLSSVIKKR-GLTLGSV--LQSPMEGLIQYHHNNHVL 284 (291)
T ss_dssp HHHHHHHHHHHHHHH-TGG-GCCTTSCEEEESHHHHHTHHHHHHHHHHT-TCCEEEE--ESCSHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHHHHHHH-hcc-cCCCCceEEEECchHHhhHHHHHHHHHHc-CCeeccc--CcCHHHHHHHHHHhhhhh
Confidence 477777777666666 322 11267889999998876 4444443332 2344443 378899999998765443
No 153
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=43.12 E-value=9.9 Score=42.15 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=17.3
Q ss_pred eEEEEecCccceeeEEEcCCCC
Q 007010 56 VFLGVDVGTGSARAGLFDESGK 77 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~ 77 (621)
.++|||+|||++.+++++ +|+
T Consensus 3 ~viGIDlGTt~s~va~~~-~g~ 23 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD-GTT 23 (605)
T ss_dssp -CEEEECCSSEEEEEEEE-TTE
T ss_pred CEEEEEcCCcCEEEEEEE-CCE
Confidence 479999999999999986 453
No 154
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=41.45 E-value=11 Score=38.10 Aligned_cols=20 Identities=30% Similarity=0.390 Sum_probs=16.2
Q ss_pred eEEEEecCccceeeEEEcCCC
Q 007010 56 VFLGVDVGTGSARAGLFDESG 76 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g 76 (621)
..||||+|||++|+++. .+|
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~ 23 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG 23 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE
T ss_pred ceEEEEcCcCcEEEEEC-CCC
Confidence 47999999999999864 344
No 155
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=40.50 E-value=29 Score=35.81 Aligned_cols=46 Identities=13% Similarity=0.165 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCC-CCHHHHHHHHHh
Q 007010 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADI 537 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga-~s~~w~Qi~Adv 537 (621)
+-++|..+|.++..+-.+.. .+ .++.|+++||.. +++.+++.+.+-
T Consensus 290 ~lA~d~f~yri~k~IGa~aa~L~-gvDaIVFTgGIgEns~~iR~~i~~~ 337 (384)
T 3khy_A 290 KLAIEIFSHRVAKFVASYMIYFN-KLDALVFTGGIGENAANIRKNIISK 337 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCS-SCCEEEEEHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccccCcHHHHHHHHhh
Confidence 36789999999888776654 45 789999999988 778777766544
No 156
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=40.36 E-value=50 Score=32.69 Aligned_cols=69 Identities=19% Similarity=0.133 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCC-CC-HHHHHHHHHhhC--------Cceeecc-CCCchhHHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLA-KN-PLFLQQHADIIG--------CPIILPR-ENESVLLGAAILGA 560 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga-~s-~~w~Qi~Advlg--------~pV~~~~-~~e~~alGAA~lA~ 560 (621)
.+++-.+..+...+..+... ..++.|++.||.+ +. +.+.+.+.+.+. .+|..+. ..+++++|||.++.
T Consensus 216 ~~~~~~~~~l~~~i~~l~~~-~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 216 RLVLQAARYVGIGLASLVKA-FDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 45555555444444443321 2567888888877 54 545544433321 2255544 35677899999886
Q ss_pred h
Q 007010 561 V 561 (621)
Q Consensus 561 ~ 561 (621)
.
T Consensus 295 ~ 295 (302)
T 3vov_A 295 L 295 (302)
T ss_dssp H
T ss_pred H
Confidence 4
No 157
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=39.96 E-value=11 Score=42.48 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=16.3
Q ss_pred EEEEecCccceeeEEEcC
Q 007010 57 FLGVDVGTGSARAGLFDE 74 (621)
Q Consensus 57 ~lgIDiGTtsiKa~l~d~ 74 (621)
+||||+|||+..+++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 799999999999998864
No 158
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=39.81 E-value=26 Score=41.87 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=26.6
Q ss_pred CCeEEEEecCc-----cceeeEEEcCCCCEEEEEEe
Q 007010 54 RSVFLGVDVGT-----GSARAGLFDESGKLLGSASS 84 (621)
Q Consensus 54 ~~~~lgIDiGT-----tsiKa~l~d~~g~vv~~~~~ 84 (621)
.+.+||||-|- +++|++++|.+|+++.....
T Consensus 515 ~~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 515 IPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CCCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 35799999985 48999999999999998766
No 159
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=39.46 E-value=64 Score=33.28 Aligned_cols=67 Identities=16% Similarity=0.237 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC-HHHHHHHHHhh----------CCceeecc-CCCchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADII----------GCPIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s-~~w~Qi~Advl----------g~pV~~~~-~~e~~alGAA~lA 559 (621)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+...+ ..+|+... ..++.++|||++.
T Consensus 313 ~~l~~~~~~L~~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 313 DIITGVGAHVGRILAIMVNL-FNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 45555554444444433321 256788888888764 55444333221 35566655 4567899997654
No 160
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=38.32 E-value=34 Score=37.21 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=38.7
Q ss_pred CCeEEEEecCccceeeEEEcC-CC--CEEEEEEeeeccccCCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 007010 54 RSVFLGVDVGTGSARAGLFDE-SG--KLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVD 120 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~-~g--~vv~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~~~ 120 (621)
|+|+.|||||+|++.+++-+. +| +++.....++.=. .| ..+|.+... ++|++++++++..
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi--KG-t~~Ni~g~~----~si~~a~~~a~~~ 63 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM--KG-TRDNIAGTL----AALEQALAKTPWS 63 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS--TT-SGGGHHHHH----HHHHHHHTTSSCC
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc--ce-eeeCHHHHH----HHHHHHHHHhCCc
Confidence 479999999999999998763 35 5677777765422 22 234555444 5566666665543
No 161
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=38.20 E-value=34 Score=36.33 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=37.3
Q ss_pred CCeEEEEecCccceeeEEEcC-CC-----CEEEEEEeeeccccCCCc--cccCHHHHHHHHHHHHHHHHH
Q 007010 54 RSVFLGVDVGTGSARAGLFDE-SG-----KLLGSASSPIQIWKEGDC--IEQSSTDIWHAICAAVDSACS 115 (621)
Q Consensus 54 ~~~~lgIDiGTtsiKa~l~d~-~g-----~vv~~~~~~~~~~~~~g~--~eqd~~~~~~~~~~~l~~~~~ 115 (621)
.+|.+.||+|+|++|..||.- .. .++.+. .... ...||. ...+|+...+.+..+++.+.+
T Consensus 33 ~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~-~~~k-~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~ 100 (452)
T 3zx3_A 33 VKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQL-EECQ-VKGPGISKYAQKTDEIAAYLAECMKMSTE 100 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEE-EEEE-CSSSCGGGGTTCGGGHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCCcEEEEEEEeCCcCCCcccccee-eeec-ccCCChhccCCCHHHHHHHHHHHHHHHHH
Confidence 368899999999999999983 21 122211 1111 112442 234888888888877777654
No 162
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=37.16 E-value=59 Score=32.21 Aligned_cols=53 Identities=17% Similarity=0.253 Sum_probs=32.1
Q ss_pred ccHHHHHHcCCCCCCcEEEechhhhhhhcccc--cccCccchhhhhhhhhhccceEEEEecccceecceeCc
Q 007010 299 LTPAAAKELGLVPGTPVGTSLIDAHAGGVGVM--ESVPESVSEAKENEEEAICHRMVLVCGTSTCHMAVSRN 368 (621)
Q Consensus 299 l~~~~a~~~Gl~~g~pV~~g~~D~~aa~lg~~--g~~~~g~~~~~~~~~~~~~~~~~~~~GTs~~~~~~~~~ 368 (621)
+.+.+.+++|+ || .-..|..|+++|-. |..+. ..+.+++++||.-.-..+.+.
T Consensus 89 l~~~l~~~~~~----pV-~v~NDanaaalaE~~~G~~~~------------~~~~~~l~~GtGiG~gii~~G 143 (302)
T 3epq_A 89 FLQTVXNEMXI----PV-GFSTDVNAAALGEFLFGEAXG------------LDSCLYITIGTGIGAGAIVEG 143 (302)
T ss_dssp HHHHHHHHHCS----CE-EEEEHHHHHHHHHHHHSTTTT------------CSCEEEEEESSSEEEEEEETT
T ss_pred hHHHHHHHhCC----CE-EEechhHHHHHHHHHhCCCCC------------CCcEEEEEECCceEEEEEECC
Confidence 56667777754 65 45689888888731 22111 135688999996544444443
No 163
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=35.56 E-value=28 Score=35.67 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=30.5
Q ss_pred CcCEEEEecCCCCCHH--HHHHHHHhhCCceeeccCCCchhHHHHHHHHh
Q 007010 514 KIDTLLACGGLAKNPL--FLQQHADIIGCPIILPRENESVLLGAAILGAV 561 (621)
Q Consensus 514 ~~~~I~~~GGga~s~~--w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~~ 561 (621)
.++.|+++||||.-.. +.+.+.+.+ |.. .+...+.|.|...++..
T Consensus 290 ~~~~Ivl~GGGa~l~~~~l~~~i~~~~--~~~-~~p~~anA~G~~~~~~~ 336 (355)
T 3js6_A 290 SIDRIIVTGGGANIHFDSLSHYYSDVF--EKA-DDSQFSNVRGYEKLGEL 336 (355)
T ss_dssp SCSEEEEESTTHHHHHHHHHHHSSSCE--ECC-SSGGGHHHHHHHHHHHH
T ss_pred hccEEEEECcchhcchhhHHHHHHHHC--CCC-CCcHHHHHHHHHHHHHH
Confidence 3578999999987332 335666666 333 44556779999887654
No 164
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=35.52 E-value=83 Score=32.76 Aligned_cols=68 Identities=10% Similarity=0.112 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC-HHHHHHHHH-h----h-----CCceeecc-CCCchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHAD-I----I-----GCPIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s-~~w~Qi~Ad-v----l-----g~pV~~~~-~~e~~alGAA~lA 559 (621)
.+++-.+..+...+..+... ..++.|++.||.++. +.+.+.+-. + + ..+|.... ..+ .++|||.++
T Consensus 336 ~il~~~~~~L~~~i~~l~~~-ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~ 413 (429)
T 1z05_A 336 DVIQQLGRYLGAAIAIVINL-FNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALI 413 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHH
Confidence 45555555554444433321 256788888888763 444332222 1 1 35566654 345 899999887
Q ss_pred Hh
Q 007010 560 AV 561 (621)
Q Consensus 560 ~~ 561 (621)
..
T Consensus 414 ~~ 415 (429)
T 1z05_A 414 KQ 415 (429)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 165
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=35.24 E-value=36 Score=35.76 Aligned_cols=49 Identities=16% Similarity=0.079 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CC-----CCcCEEEEecCC-CCCHHHHHHHHHhhC
Q 007010 491 LATVQGIAYGTRHIVEHCNA-HG-----HKIDTLLACGGL-AKNPLFLQQHADIIG 539 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~-~g-----~~~~~I~~~GGg-a~s~~w~Qi~Advlg 539 (621)
+-++|..+|.++..+-.+.. .+ ..++.|+++||. -+|+.+++.+.+-++
T Consensus 323 ~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l~ 378 (438)
T 4h0p_A 323 KLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKLA 378 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhHh
Confidence 46889999998887765533 33 358899999996 588988877665543
No 166
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=35.08 E-value=17 Score=36.82 Aligned_cols=23 Identities=9% Similarity=-0.013 Sum_probs=18.1
Q ss_pred CCCCCCeEEEEecCccceeeEEE
Q 007010 50 PARSRSVFLGVDVGTGSARAGLF 72 (621)
Q Consensus 50 ~~m~~~~~lgIDiGTtsiKa~l~ 72 (621)
++|+.+++||||+|-.++|++..
T Consensus 2 ~~~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 2 ENITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp ---CCEEEEEEEECSSEEEEEEH
T ss_pred CCccCceEEEEecCCceEEEEec
Confidence 36777899999999999999963
No 167
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=34.90 E-value=36 Score=33.98 Aligned_cols=67 Identities=21% Similarity=0.135 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCC-HHHHHHHHHh----h----CCceeecc-CCCchhHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKN-PLFLQQHADI----I----GCPIILPR-ENESVLLGAAILG 559 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s-~~w~Qi~Adv----l----g~pV~~~~-~~e~~alGAA~lA 559 (621)
.+++-.+..+...+..+... ..++.|++.||.++. +++.++...+ + ..+|..+. ..++.++|||.+|
T Consensus 248 ~il~~~~~~La~~i~~l~~~-l~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 248 AHVERYLDLLAVCLGNILTI-VDPDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 44444444444444333221 246778888888764 4444432222 1 33455444 3467789999875
No 168
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=33.32 E-value=21 Score=36.39 Aligned_cols=22 Identities=36% Similarity=0.563 Sum_probs=17.5
Q ss_pred eEEEEecCccceeeEEEcCCCCEE
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLL 79 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv 79 (621)
..+|||+||+++|+.. .+|.++
T Consensus 22 ~~igiDlG~~~tkv~~--~~g~~~ 43 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG--VDGKRI 43 (346)
T ss_dssp EEEEEEECSSEEEEEC--GGGCEE
T ss_pred EEEEEecCCcceeEEe--cCCCEE
Confidence 6799999999999884 446554
No 169
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=32.66 E-value=59 Score=33.17 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecC-CCCCHHHHH------HHH-Hhh-----------CCceeecc-CCCch
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGG-LAKNPLFLQ------QHA-DII-----------GCPIILPR-ENESV 551 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GG-ga~s~~w~Q------i~A-dvl-----------g~pV~~~~-~~e~~ 551 (621)
.+++-.+..+...+..+... ..++.|++.|| .++++.+.+ .+. ..+ ..||+... ..++.
T Consensus 283 ~~l~~~~~~L~~~i~~l~~~-l~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~ 361 (373)
T 2q2r_A 283 KAMKKYHEYLMRVGSEASMA-LLPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLN 361 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HCCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchh
Confidence 44444444444444333221 24566777677 566555554 222 222 24555543 45788
Q ss_pred hHHHHHHHHh
Q 007010 552 LLGAAILGAV 561 (621)
Q Consensus 552 alGAA~lA~~ 561 (621)
++|||.++..
T Consensus 362 l~GAa~l~~~ 371 (373)
T 2q2r_A 362 LMGCYRCGLD 371 (373)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 170
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=32.57 E-value=32 Score=34.07 Aligned_cols=62 Identities=15% Similarity=0.167 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCC--CHHHHHHHHHhhCCceeeccCCCchhHHHHHHHH
Q 007010 491 LATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAK--NPLFLQQHADIIGCPIILPRENESVLLGAAILGA 560 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~--s~~w~Qi~Advlg~pV~~~~~~e~~alGAA~lA~ 560 (621)
+.+++-.+..+...+..+... .++.|++.||.++ .+.+.+-+... +.. ...++++|||++|.
T Consensus 229 ~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~----i~~--~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 229 DALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQR----LVA--PQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHH----CCC--CSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhh----ccC--CCCCHHHHHHHHHh
Confidence 367776666666666655432 6778888888764 23333333322 222 35677899998874
No 171
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=28.93 E-value=86 Score=33.15 Aligned_cols=47 Identities=23% Similarity=0.252 Sum_probs=29.9
Q ss_pred EEEEecCCC-CCHHHHHHHHH----hh--CCceeeccCCCchhHHHHHHHHhhc
Q 007010 517 TLLACGGLA-KNPLFLQQHAD----II--GCPIILPRENESVLLGAAILGAVAA 563 (621)
Q Consensus 517 ~I~~~GGga-~s~~w~Qi~Ad----vl--g~pV~~~~~~e~~alGAA~lA~~a~ 563 (621)
.|.+.||.. +.+.+.+.+.. .+ ..+|......+++.+|||++|+.+.
T Consensus 395 ~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~~~ 448 (451)
T 1bdg_A 395 TVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAASCT 448 (451)
T ss_dssp EEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTTC-
T ss_pred EEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHHHh
Confidence 344556654 45555544433 33 4567666678899999999998763
No 172
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=28.03 E-value=50 Score=34.42 Aligned_cols=47 Identities=11% Similarity=0.240 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCC-CCHHHHHHHHHhhC
Q 007010 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADIIG 539 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga-~s~~w~Qi~Advlg 539 (621)
-++|-.+|.++..+-.+.. .+ .++.|+++||.. +|+.+++.+.+-++
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 300 LVLEIYDYRIAKYIGAYAAAMN-GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 5788899998877765543 45 689999999988 88998887776543
No 173
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=27.83 E-value=56 Score=33.95 Aligned_cols=47 Identities=9% Similarity=-0.038 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCC-CCCHHHHHHHHHhh
Q 007010 491 LATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGL-AKNPLFLQQHADII 538 (621)
Q Consensus 491 rAvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGg-a~s~~w~Qi~Advl 538 (621)
+-++|..+|.++..+-.+.. .+. ++.|+++||. -+|+.+++.+.+-+
T Consensus 303 ~lA~d~f~yri~k~IGa~aa~L~G-vDaIVFTgGIGEns~~vR~~i~~~l 351 (404)
T 4h0o_A 303 QLAFDVYIKQLAKTIGGLMVEIGG-LDLLVFTDQMGLEVWQVRKAICDKM 351 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCccccCcHHHHHHHHhhh
Confidence 36789999999887765543 454 8999999996 57788887665543
No 174
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=27.68 E-value=55 Score=34.16 Aligned_cols=46 Identities=11% Similarity=0.205 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCcCEEEEecCCC-CCHHHHHHHHHhh
Q 007010 492 ATVQGIAYGTRHIVEHCNA-HGHKIDTLLACGGLA-KNPLFLQQHADII 538 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~-~g~~~~~I~~~GGga-~s~~w~Qi~Advl 538 (621)
-++|-.+|.++..+-.+.. .| .++.|+++||.. +|+.+++.+.+-+
T Consensus 300 lA~d~f~yri~k~IGa~~a~Lg-gvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 300 LALEIFAYKVKKFIGEYSAVLN-GADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhC-CCCEEEECccccccCHHHHHHHHhhh
Confidence 5889999998887766543 54 589999999998 8999888777654
No 175
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=27.65 E-value=18 Score=37.79 Aligned_cols=47 Identities=13% Similarity=0.197 Sum_probs=33.2
Q ss_pred cCEEEEecCCCCCHHHHHHHHHhhCCc----------------------eeec--c-CCCchhHHHHHHHHh
Q 007010 515 IDTLLACGGLAKNPLFLQQHADIIGCP----------------------IILP--R-ENESVLLGAAILGAV 561 (621)
Q Consensus 515 ~~~I~~~GGga~s~~w~Qi~Advlg~p----------------------V~~~--~-~~e~~alGAA~lA~~ 561 (621)
+++|+++||.++-+.+.+.+.+-++.. |.+. . ...++.+|++++|..
T Consensus 316 ~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 316 YKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 467999999999998888777654422 2222 2 245778899999864
No 176
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=26.93 E-value=63 Score=31.18 Aligned_cols=46 Identities=28% Similarity=0.440 Sum_probs=29.4
Q ss_pred CcCEEEEecCCCCC-HHHHHHHHHhhCCceeecc-CCCchhHHHHHHHHh
Q 007010 514 KIDTLLACGGLAKN-PLFLQQHADIIGCPIILPR-ENESVLLGAAILGAV 561 (621)
Q Consensus 514 ~~~~I~~~GGga~s-~~w~Qi~Advlg~pV~~~~-~~e~~alGAA~lA~~ 561 (621)
.++.|++.||.++. +.+.+.+. ...+|..+. ..++.++|||.++..
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~--~~~~i~~s~l~~~a~~~GAa~l~~~ 261 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR--LRTPIVPAVLRNEAGIVGAAIEIAL 261 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC--CSSCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcccHHHHHhhc--cCceEEECCcCCcHHHHHHHHHHHh
Confidence 56788888888764 44333222 245666655 356789999988753
No 177
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.61 E-value=16 Score=36.12 Aligned_cols=63 Identities=13% Similarity=-0.098 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCC---ceeeccCCCchhHHHHHHHH
Q 007010 492 ATVQGIAYGTRHIVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC---PIILPRENESVLLGAAILGA 560 (621)
Q Consensus 492 AvlEgia~~~r~~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~---pV~~~~~~e~~alGAA~lA~ 560 (621)
.+++-.+..+...+ .+. .-.+++.|++.||.+++ +.+.+...+.. ++..+ .++.++|||++|.
T Consensus 212 ~i~~~~~~~La~~i-~~~-~~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~--~~a~~~GAa~la~ 277 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQ-YDYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKI--LQSPMEGLIQYHS 277 (291)
T ss_dssp HHHHHHHHHHHTTT-GGG-SCTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEE--CSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHH-hcc-cCCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeec--CCCHHHHHHHHHH
Confidence 56665555555555 221 11267788888888876 44444444443 34433 4778899998763
No 178
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=26.20 E-value=17 Score=30.80 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=26.7
Q ss_pred HHHH-HHHHHhcchhHHhhcceecchhHHhhhhc
Q 007010 193 PPKL-LWVKENLQESWSMVFRWMDLSDWLSYRAT 225 (621)
Q Consensus 193 ~~kl-~Wl~~~~pe~~~~~~~~l~~~dyl~~~LT 225 (621)
+.|+ .|+++|..+++.|...-..=.|||.|++|
T Consensus 78 ~akvekwf~rnc~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNCNSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHcccCCHHHHHHHHHHHHh
Confidence 4554 49999999999888766667899999886
No 179
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=26.03 E-value=71 Score=31.94 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=26.4
Q ss_pred eEEEEecCccceeeEEEcCCCCEEEEEEeeec
Q 007010 56 VFLGVDVGTGSARAGLFDESGKLLGSASSPIQ 87 (621)
Q Consensus 56 ~~lgIDiGTtsiKa~l~d~~g~vv~~~~~~~~ 87 (621)
-.+.||||+.|+-.++++ ++++....+.|+-
T Consensus 132 ~~lviDIGGGStEl~~~~-~~~~~~~~Sl~lG 162 (315)
T 3mdq_A 132 ISLAMDIGGGSVEFIIGN-KNEILWKQSFEIG 162 (315)
T ss_dssp CEEEEEECSSCEEEEEEC-SSCEEEEEEESCC
T ss_pred CEEEEEeCCCceEEEEEE-CCeEeeeEEEech
Confidence 367899999999999997 6788888888874
No 180
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=26.01 E-value=53 Score=25.70 Aligned_cols=35 Identities=26% Similarity=0.260 Sum_probs=25.5
Q ss_pred HHHHHHcCCCccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCcE
Q 007010 265 DEFWEEIGLGDLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTPV 315 (621)
Q Consensus 265 ~~ll~~~gi~~~~~~~lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~pV 315 (621)
.++|+.++|.+. +||+|. .++-+|+.+|+..|--|
T Consensus 23 ~~lL~~y~i~~~---qLP~I~-------------~~DPvar~~G~k~GdVv 57 (77)
T 1eik_A 23 KRVLKELDAHPE---QLPKIK-------------TTDPVAKAIGAKRGDIV 57 (77)
T ss_dssp HHHHHHTTCCTT---TSCCCB-------------TTSHHHHGGGCCTTCEE
T ss_pred HHHHHHcCCCHH---HCCeee-------------CcCHhhHHhCCCCCCEE
Confidence 468899999874 678764 56778888888877433
No 181
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=25.73 E-value=1e+02 Score=18.10 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 007010 596 DAKYLIFRELFEQQVSQRSIM 616 (621)
Q Consensus 596 ~~~y~~y~~l~~~~~~~~~~~ 616 (621)
+++|+...++-+.++.+||-+
T Consensus 4 delykeledlqerlrklrkkl 24 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKKL 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 456666666666666666544
No 182
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=23.40 E-value=30 Score=38.36 Aligned_cols=47 Identities=30% Similarity=0.246 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHH-HHHHHHhCCCCcCEEEEecCCCCCHHHHHHHHHhhCC
Q 007010 491 LATVQGIAYGTRH-IVEHCNAHGHKIDTLLACGGLAKNPLFLQQHADIIGC 540 (621)
Q Consensus 491 rAvlEgia~~~r~-~l~~l~~~g~~~~~I~~~GGga~s~~w~Qi~Advlg~ 540 (621)
.||+|+|...... -...+++ -.++|.++||||+-+.+--++-|-++.
T Consensus 479 kAIi~SIt~a~~~~d~~k~~~---~y~nilivGggski~g~~~~L~dri~i 526 (655)
T 4am6_A 479 KAIVQSIANASITADVTRMNS---FYSNILIVGGSSKIPALDFILTDRINI 526 (655)
T ss_dssp HHHHHHHHHHHHTSCGGGHHH---HHTCEEEESTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccHHHHHH---HhhcEEEEcCcccCccHHHHHHHHHHh
Confidence 4999999865543 1122222 246799999999999999999998774
No 183
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=22.69 E-value=90 Score=32.95 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=50.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhC-CCCc--CEEEEecCCC-CCHHHHHHHHHhh----C-Cce
Q 007010 480 DSSEKQLALLYLATVQGIAYGTRH--------IVEHCNAH-GHKI--DTLLACGGLA-KNPLFLQQHADII----G-CPI 542 (621)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~--------~l~~l~~~-g~~~--~~I~~~GGga-~s~~w~Qi~Advl----g-~pV 542 (621)
..+.+|.. ++|-+.+.|.-...+ ++..+.+. +... -.|-+.|+.- +.|.+.+.+...+ + ++|
T Consensus 339 ~~t~~d~~-~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v 417 (445)
T 3hm8_A 339 PLTSDDAL-MVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVV 417 (445)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEE
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHHHHhCCCCcE
Confidence 45556643 566777766554333 33333321 2221 2355556654 4666666555543 3 577
Q ss_pred eeccCCCchhHHHHHHHHhhcc
Q 007010 543 ILPRENESVLLGAAILGAVAAK 564 (621)
Q Consensus 543 ~~~~~~e~~alGAA~lA~~a~G 564 (621)
......+++.+|||++|+++..
T Consensus 418 ~~~~s~DGSg~GAAl~AA~a~~ 439 (445)
T 3hm8_A 418 TFLQSEDGSGKGAALVTAVACR 439 (445)
T ss_dssp EEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEECCCCchHHHHHHHHHHHH
Confidence 7777889999999999998753
No 184
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=21.96 E-value=3.7e+02 Score=27.56 Aligned_cols=65 Identities=22% Similarity=0.360 Sum_probs=45.4
Q ss_pred CcCEEEE--ecCCCCCHHHHHHHHHh-----hCCceeeccCCCchhHHHHHHHHhhcccc--CCHHHHHHHhhc
Q 007010 514 KIDTLLA--CGGLAKNPLFLQQHADI-----IGCPIILPRENESVLLGAAILGAVAAKRY--SSLIEAMKAMNA 578 (621)
Q Consensus 514 ~~~~I~~--~GGga~s~~w~Qi~Adv-----lg~pV~~~~~~e~~alGAA~lA~~a~G~~--~s~~ea~~~~~~ 578 (621)
.++-|++ .||..+.+..-+-+.+. .++||.+--.....-.|-.++.-.++..+ +++++|+++.+.
T Consensus 310 ~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l~~~g~~~~~~~~~~~aa~~~v~ 383 (388)
T 2nu8_B 310 KVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVA 383 (388)
T ss_dssp TCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHHHH
T ss_pred CCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHHHHCCCceecCCCHHHHHHHHHH
Confidence 4455544 68888877777766665 47898773333345678888877677888 899998877653
No 185
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=21.80 E-value=71 Score=24.97 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=34.1
Q ss_pred HhhcCCcEEcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007010 575 AMNAAGQVIHPSKDPKVKKYHDAKYLIFRELFEQQVSQRSIMAQAL 620 (621)
Q Consensus 575 ~~~~~~~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~~~~~~~~~~ 620 (621)
++....+.|++++|+-+...|..+-..-..+-.++.++.+.|+++.
T Consensus 27 KLkdA~~~~e~DPDevNK~~~~~R~~~V~~lq~Ki~elkrqlAd~v 72 (78)
T 2ic6_A 27 KLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLI 72 (78)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344555544888888999888888888888888999988864
No 186
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=21.47 E-value=69 Score=26.40 Aligned_cols=40 Identities=10% Similarity=0.041 Sum_probs=31.4
Q ss_pred cEEcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007010 581 QVIHPSKDPKVKKYHDAKYLIFRELFEQQVSQRSIMAQAL 620 (621)
Q Consensus 581 ~~~~P~~~~~~~~~y~~~y~~y~~l~~~~~~~~~~~~~~~ 620 (621)
+.|++++|.-+...|..+-..=..+-.++.++.+.|+++.
T Consensus 63 ~~~E~DPDevNK~tl~~R~~~Vsalq~KiaeLKrqLAd~v 102 (107)
T 2k48_A 63 KAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLV 102 (107)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433888999999888888888888999999998864
No 187
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=21.20 E-value=78 Score=32.65 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=24.8
Q ss_pred CeEEEEecCccceeeEEEcC-CCCEEEEEEee
Q 007010 55 SVFLGVDVGTGSARAGLFDE-SGKLLGSASSP 85 (621)
Q Consensus 55 ~~~lgIDiGTtsiKa~l~d~-~g~vv~~~~~~ 85 (621)
+.+|.|..|+||+|..|||. +++++.+...+
T Consensus 2 ~~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 33 (384)
T 3khy_A 2 SEILVLNCGSSSVKFALINPHTSQSLVTGLAE 33 (384)
T ss_dssp CEEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred CEEEEEECCchhheEEEEecCCCceEEEEEEE
Confidence 37899999999999999994 56667666543
No 188
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=21.17 E-value=51 Score=25.87 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=25.5
Q ss_pred CHHHHHHcCCCccccccccccCcccccCCCccCCCccHHHHHHcCCCCCCc
Q 007010 264 DDEFWEEIGLGDLIDGHHAKIGRSVAFPGHPLGSGLTPAAAKELGLVPGTP 314 (621)
Q Consensus 264 s~~ll~~~gi~~~~~~~lp~i~~~v~~~g~~~G~~l~~~~a~~~Gl~~g~p 314 (621)
-.++|+.++|.+. +||+|. .++-+|+.+|+..|--
T Consensus 20 k~~lL~~y~i~~~---qLPrI~-------------~~DPvar~~G~k~GdV 54 (78)
T 1hmj_A 20 VEEILKRYNIKIQ---QLPKIY-------------EDDPVIQEIGAKEGDV 54 (78)
T ss_pred HHHHHHHcCCCHH---HCCeee-------------CcCHhhHHhCCCCCCE
Confidence 3478999999874 678764 5667788888887743
No 189
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=20.58 E-value=70 Score=34.05 Aligned_cols=85 Identities=19% Similarity=0.289 Sum_probs=50.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhC-CCCc--CEEEEecCCC-CCHHHHHHHHHhh-----CCce
Q 007010 480 DSSEKQLALLYLATVQGIAYGTRH--------IVEHCNAH-GHKI--DTLLACGGLA-KNPLFLQQHADII-----GCPI 542 (621)
Q Consensus 480 ~~~~~~~~~~~rAvlEgia~~~r~--------~l~~l~~~-g~~~--~~I~~~GGga-~s~~w~Qi~Advl-----g~pV 542 (621)
..+.+|. .++|-+.+.|.-...+ ++..+.+. +... -.|-+.|+.- +.|.+.+.+...+ +++|
T Consensus 363 ~~~~~d~-~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v 441 (470)
T 3f9m_A 363 RPSTTDC-DIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCEI 441 (470)
T ss_dssp CCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEE
T ss_pred CCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchHHHHHHHHHHHHcCCCeE
Confidence 3344443 3566777766554333 23333321 1111 2355567655 4677766665553 5678
Q ss_pred eeccCCCchhHHHHHHHHhhccc
Q 007010 543 ILPRENESVLLGAAILGAVAAKR 565 (621)
Q Consensus 543 ~~~~~~e~~alGAA~lA~~a~G~ 565 (621)
......+++.+|||++|+++...
T Consensus 442 ~l~~a~DGSg~GAAliAa~a~~~ 464 (470)
T 3f9m_A 442 TFIESEEGSGRGAALVSAVACKK 464 (470)
T ss_dssp EEEECSSHHHHHHHHHHHHHTC-
T ss_pred EEEEcCCCcHHHHHHHHHHHHHH
Confidence 87778999999999999997653
No 190
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=20.09 E-value=4.3e+02 Score=26.63 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=45.5
Q ss_pred EEEecC-CCCC---HHHHHHHHHhhCCceeeccCCCc-h-hHHHH-HHHHhhccccCCHHHHHHHhhcCCcEEcCCCChh
Q 007010 518 LLACGG-LAKN---PLFLQQHADIIGCPIILPRENES-V-LLGAA-ILGAVAAKRYSSLIEAMKAMNAAGQVIHPSKDPK 590 (621)
Q Consensus 518 I~~~GG-ga~s---~~w~Qi~Advlg~pV~~~~~~e~-~-alGAA-~lA~~a~G~~~s~~ea~~~~~~~~~~~~P~~~~~ 590 (621)
+..+|| +.+. ....-+++.-.|.||..-..... + -.|.| ++-+.++..-.+.+++.+.+.+..-.|-+ -+.
T Consensus 89 ~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~~~~~~~~~~~l~~~gi~fl~--a~~ 166 (345)
T 1khd_A 89 IVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRLDMSAEDSRQALDDLNVCFLF--APQ 166 (345)
T ss_dssp EEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCTTCCHHHHHHHHHHHSEEEEE--HHH
T ss_pred ecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCCCCCHHHHHHHHHHCCEEEEe--hhh
Confidence 666777 5555 66677778888999987554433 3 34554 56666666667788876666555555554 334
Q ss_pred hHHHHHHHHH
Q 007010 591 VKKYHDAKYL 600 (621)
Q Consensus 591 ~~~~y~~~y~ 600 (621)
.+...+.+|.
T Consensus 167 ~hPa~k~l~~ 176 (345)
T 1khd_A 167 YHTGFRHAMP 176 (345)
T ss_dssp HCGGGGGGHH
T ss_pred hCHHHHHHHH
Confidence 3333333343
Done!