Query 007015
Match_columns 621
No_of_seqs 356 out of 1127
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 14:56:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 6.3E-31 2.2E-35 265.1 5.2 230 46-340 23-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 3.2E-30 1.1E-34 263.3 7.7 234 46-344 24-267 (279)
3 3htm_A Speckle-type POZ protei 99.9 3.9E-23 1.3E-27 195.0 9.7 123 47-186 27-149 (172)
4 2vkp_A BTB/POZ domain-containi 99.9 1.9E-22 6.6E-27 177.2 8.6 104 48-160 2-109 (109)
5 4eoz_A Speckle-type POZ protei 99.9 3.1E-23 1.1E-27 190.4 3.1 123 47-186 18-140 (145)
6 2if5_A Zinc finger and BTB dom 99.9 3E-22 1E-26 179.4 8.3 103 47-157 18-120 (120)
7 3b84_A Zinc finger and BTB dom 99.9 2.6E-22 9E-27 180.4 6.1 102 46-159 16-117 (119)
8 1r29_A B-cell lymphoma 6 prote 99.9 6.6E-22 2.3E-26 179.1 8.6 103 47-158 22-125 (127)
9 2ppi_A Gigaxonin; BTB domain, 99.9 4.3E-22 1.5E-26 185.4 7.1 119 30-157 24-144 (144)
10 2vpk_A Myoneurin; transcriptio 99.8 7.6E-22 2.6E-26 176.0 7.6 101 46-158 14-116 (116)
11 1buo_A POZ domain, protein (pr 99.8 9.7E-22 3.3E-26 176.9 7.6 101 46-159 20-120 (121)
12 2yy9_A Zinc finger and BTB dom 99.8 4E-22 1.4E-26 183.3 5.1 103 46-160 17-119 (135)
13 2z8h_A Transcription regulator 99.8 6.2E-22 2.1E-26 182.4 6.2 107 46-162 28-135 (138)
14 3ohu_A Transcription regulator 99.8 4.6E-22 1.6E-26 179.6 4.4 101 46-156 24-125 (125)
15 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.4E-21 4.6E-26 175.7 5.1 99 46-157 19-117 (119)
16 3ga1_A Nucleus accumbens-assoc 99.8 1E-21 3.5E-26 178.7 4.2 101 47-159 26-127 (129)
17 2ihc_A Transcription regulator 99.8 8.5E-22 2.9E-26 178.3 3.2 102 46-157 21-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 2.1E-21 7.3E-26 175.6 5.1 94 48-158 24-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 1.9E-20 6.5E-25 193.5 8.4 132 47-195 167-301 (312)
20 3fkc_A Transcriptional regulat 99.8 3.4E-19 1.2E-23 159.8 5.7 88 47-141 24-112 (116)
21 2ast_A S-phase kinase-associat 99.5 3.5E-14 1.2E-18 134.7 6.1 95 57-160 3-126 (159)
22 4ajy_C Transcription elongatio 99.3 3.7E-12 1.3E-16 111.2 6.2 80 57-139 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 5E-11 1.7E-15 110.9 6.2 91 57-160 4-121 (141)
24 2p1m_A SKP1-like protein 1A; F 99.0 7.1E-11 2.4E-15 112.2 0.1 92 57-160 6-125 (160)
25 2fnj_C Transcription elongatio 98.4 1.5E-07 5.3E-12 82.0 4.5 80 57-139 3-96 (96)
26 1hv2_A Elongin C, ELC1; protei 98.4 1.8E-07 6.2E-12 82.0 4.6 79 57-139 6-99 (99)
27 3v7d_A Suppressor of kinetocho 98.3 8.7E-07 3E-11 84.9 6.2 96 56-160 8-133 (169)
28 1vcb_B Protein (elongin C); tu 97.8 9.7E-06 3.3E-10 72.6 2.9 80 57-139 19-112 (112)
29 3drz_A BTB/POZ domain-containi 97.7 9E-05 3.1E-09 65.5 8.5 93 56-157 7-105 (107)
30 2eqx_A Kelch repeat and BTB do 97.5 1.7E-05 5.8E-10 69.7 0.8 74 170-256 9-83 (105)
31 3drx_A BTB/POZ domain-containi 96.4 0.0077 2.6E-07 59.2 8.0 95 56-159 13-113 (202)
32 3kvt_A Potassium channel prote 95.4 0.004 1.4E-07 55.9 1.2 83 57-142 7-92 (115)
33 1s1g_A Potassium voltage-gated 93.8 0.034 1.2E-06 50.5 3.2 81 56-142 14-99 (124)
34 1t1d_A Protein (potassium chan 93.0 0.046 1.6E-06 47.8 2.6 82 57-142 3-89 (100)
35 1nn7_A Potassium channel KV4.2 92.1 0.029 9.9E-07 49.3 0.2 80 57-142 2-86 (105)
36 2nz0_B Potassium voltage-gated 91.9 0.044 1.5E-06 50.8 1.2 82 55-142 35-121 (140)
37 2yy0_A C-MYC-binding protein; 83.6 1.8 6E-05 33.6 5.1 34 534-567 18-51 (53)
38 3vmx_A Voltage-gated hydrogen 82.8 2.3 7.7E-05 32.4 5.2 36 535-570 4-39 (48)
39 1deb_A APC protein, adenomatou 75.6 5.4 0.00019 30.5 5.3 38 532-569 14-51 (54)
40 3a2a_A Voltage-gated hydrogen 71.7 5.2 0.00018 31.2 4.5 34 537-570 13-46 (58)
41 3vp9_A General transcriptional 64.5 7 0.00024 33.6 4.4 27 541-567 49-75 (92)
42 1pd7_B MAD1; PAH2, SIN3, eukar 64.0 1.6 5.5E-05 28.9 0.2 16 125-140 3-18 (26)
43 1vjh_A BET V I allergen family 51.8 9.3 0.00032 33.8 3.2 33 417-460 90-122 (122)
44 2r9r_B Paddle chimera voltage 50.8 9.6 0.00033 42.0 3.8 83 56-142 53-140 (514)
45 4dzn_A Coiled-coil peptide CC- 37.4 76 0.0026 21.5 5.0 28 536-563 3-30 (33)
46 1dip_A Delta-sleep-inducing pe 34.2 33 0.0011 28.3 3.5 32 533-564 13-44 (78)
47 2wt7_B Transcription factor MA 33.8 62 0.0021 27.6 5.3 36 533-568 53-88 (90)
48 2eqx_A Kelch repeat and BTB do 31.0 32 0.0011 29.3 3.1 37 118-160 4-40 (105)
49 3i00_A HIP-I, huntingtin-inter 30.8 67 0.0023 28.8 5.3 18 532-549 19-36 (120)
50 1ci6_A Transcription factor AT 28.5 91 0.0031 24.5 5.2 28 536-563 31-58 (63)
51 1use_A VAsp, vasodilator-stimu 28.3 72 0.0025 23.9 4.1 22 544-565 9-31 (45)
52 3b0b_C CENP-X, centromere prot 27.9 33 0.0011 28.7 2.5 42 374-418 7-48 (81)
53 2w6a_A ARF GTPase-activating p 25.3 54 0.0019 25.9 3.2 27 536-562 35-61 (63)
54 3hve_A Gigaxonin; ubiquitin, c 24.5 65 0.0022 31.2 4.5 34 121-160 130-163 (256)
55 2yy0_A C-MYC-binding protein; 23.2 86 0.0029 24.0 3.9 29 530-558 21-49 (53)
56 1nkp_B MAX protein, MYC proto- 22.6 1.1E+02 0.0039 24.9 4.9 33 536-568 48-80 (83)
57 3lay_A Zinc resistance-associa 21.5 1.6E+02 0.0054 27.9 6.3 78 459-568 66-143 (175)
58 3qh9_A Liprin-beta-2; coiled-c 21.0 1.6E+02 0.0054 24.7 5.3 25 534-558 18-42 (81)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=6.3e-31 Score=265.08 Aligned_cols=230 Identities=13% Similarity=0.161 Sum_probs=168.4
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCC--CCCcccEEecCCCCCHHHHHHHHHhhcCCCeeec
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFN 123 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~--e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It 123 (621)
..++.++.+|||+|.|||+.|++||.+|+++|+||++||+.++. ++...+|.|++++ +++|+.+++|+|||++.++
T Consensus 23 ~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~ 100 (256)
T 3hve_A 23 SSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLN 100 (256)
T ss_dssp HTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCccc
Confidence 36788999999999999999999999999999999999998765 4466789999999 9999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccccHHHHHHHHHHHHhhhhhhhHHHHhhhhhchHHHHHHhhhhHhhHHHHHHHhcccC-
Q 007015 124 PNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAWKASREN- 202 (621)
Q Consensus 124 ~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l~~sw~~si~~L~~C~~l~~~Ae~~~iv~rCidsLa~ka~~~~- 202 (621)
.+||..++.||++|||++ |++.|+.||.+.+ ...||..++.+|+.|++ +.|..++....
T Consensus 101 ~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l---------~~~n~~~i~~~A~~~~~-----~~L~~~~~~~i~ 160 (256)
T 3hve_A 101 EDTIQDVVQAADLLLLTD------LKTLCCEFLEGCI---------AAENCIGIRDFALHYCL-----HHVHYLATEYLE 160 (256)
T ss_dssp -CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTC---------CSSTTHHHHHHHHHTTC-----HHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHChHH------HHHHHHHHHHhhC---------CHhhHHHHHHHHHHcCc-----HHHHHHHHHHHH
Confidence 999999999999999998 8999999999988 57899999999999985 33333332221
Q ss_pred ccchhhhcccccchhcccccCHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHhcCCCccccccccCCCCCCcchhHhhhc
Q 007015 203 STTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILN 282 (621)
Q Consensus 203 ~~~~~l~~~~dwW~eDl~~Ls~d~~~rlI~am~~~~~~ee~I~~al~~Yak~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (621)
.+|..+ +-.++|..|+.+.+..+|+.......+|+.|++++++|+++..+.
T Consensus 161 ~~f~~v-----~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~------------------------ 211 (256)
T 3hve_A 161 THFRDV-----SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEI------------------------ 211 (256)
T ss_dssp HHHHHH-----TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CC------------------------
T ss_pred HHHHHH-----hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHH------------------------
Confidence 122222 226899999999999999765554457889999999998654321
Q ss_pred cCccccccchHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhhccCC-HHHHHHHHH
Q 007015 283 AGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNAS-PALISELEK 340 (621)
Q Consensus 283 ~~~~~~~~~~~~qr~LLE~Iv~lLP~~k~~vsc~FLf~LLR~A~~l~as-~~cr~~LE~ 340 (621)
+...-..|++.|+- +.+|..||...+.....+..+ +.|+.-|++
T Consensus 212 --------R~~~~~~ll~~VRf------~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 212 --------RKVHMKDVMSALWV------SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp --------STTTHHHHHHHHHH------HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred --------HHHHHHHHHHhCCC------CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 22334679999985 357788999999988888888 689988874
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=3.2e-30 Score=263.31 Aligned_cols=234 Identities=11% Similarity=0.134 Sum_probs=183.1
Q ss_pred hhhhccCCCeeEEEEEc---CeEEeecccccccccHHHHHhhcCCCCCCCcccEEec------CCCCCHHHHHHHHHhhc
Q 007015 46 SWFVTSQIPTDLSIQVQ---DVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLE------NFPGGSETFEIILKFCY 116 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~---g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~------~~pGG~~~felll~FcY 116 (621)
..++.+|.+|||+|.|| |..|+|||.+|+++|+||++||++++.++...+|.|+ +++ +++|+.+++|+|
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~~~Y 101 (279)
T 3i3n_A 24 NEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIEYMY 101 (279)
T ss_dssp HHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHHhhC
Confidence 35888999999999998 9999999999999999999999999888777899998 777 999999999999
Q ss_pred CCCeeecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHhhhhhhhHHHHhhhhhchHHHHHHhhhhHhhHHHHHH
Q 007015 117 GLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQIVRRCCDSIAW 196 (621)
Q Consensus 117 t~~i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l~~sw~~si~~L~~C~~l~~~Ae~~~iv~rCidsLa~ 196 (621)
||++.++.+||..|+.||++|||++ |.+.|+.||.+.+ ...||..++.+|+.|++ +.|..
T Consensus 102 tg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l---------~~~n~~~i~~~A~~~~~-----~~L~~ 161 (279)
T 3i3n_A 102 TGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKL---------HLSNCVAIHSLAHMYTL-----SQLAL 161 (279)
T ss_dssp HSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC---------CTTTHHHHHHHHHHTTC-----HHHHH
T ss_pred cCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcC---------CcchHHHHHHHHHHcCc-----HHHHH
Confidence 9999999999999999999999997 8999999999988 57899999999999995 33333
Q ss_pred HhcccC-ccchhhhcccccchhcccccCHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHhcCCCccccccccCCCCCCcc
Q 007015 197 KASREN-STTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHE 275 (621)
Q Consensus 197 ka~~~~-~~~~~l~~~~dwW~eDl~~Ls~d~~~rlI~am~~~~~~ee~I~~al~~Yak~~L~~~~~~~~~~~~~~~~~~~ 275 (621)
++.... .++..+ +..++|..|+.+.+..+|+.......+|+.|++++++|+++..+.
T Consensus 162 ~~~~~i~~~f~~v-----~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~----------------- 219 (279)
T 3i3n_A 162 KAADMIRRNFHKV-----IQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEE----------------- 219 (279)
T ss_dssp HHHHHHHHTHHHH-----TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHH-----------------
T ss_pred HHHHHHHHHHHHH-----hcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHH-----------------
Confidence 322221 122222 236899999999999999654444447999999999999754211
Q ss_pred hhHhhhccCccccccchHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhhccCCHHHHHHHHHHHhh
Q 007015 276 LQFSILNAGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKRVGM 344 (621)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~qr~LLE~Iv~lLP~~k~~vsc~FLf~LLR~A~~l~as~~cr~~LE~RIg~ 344 (621)
+...-..|++.|+- +.+|..+|..+++....+..++.|+.-|..-.--
T Consensus 220 ---------------r~~~~~~ll~~VRf------~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~ 267 (279)
T 3i3n_A 220 ---------------RERYFEELFKLLRL------SQMKPTYLTRHVKPERLVANNEVCVKLVADAVER 267 (279)
T ss_dssp ---------------HTTTHHHHHTTSCG------GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHhcCC------CCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHh
Confidence 11223456666653 4789999999999999999999999988765543
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.88 E-value=3.9e-23 Score=195.00 Aligned_cols=123 Identities=14% Similarity=0.092 Sum_probs=116.4
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCCc
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNN 126 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~N 126 (621)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+.++....|.|++++ +++|+.+++|+||+++.++.+|
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~ 104 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 104 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHH
Confidence 57788999999999999999999999999999999999998877677899999999 9999999999999999999999
Q ss_pred hhhHHHhhcccCcccccccccHHHHHHHHHHHHhhhhhhhHHHHhhhhhchHHHHHHhhh
Q 007015 127 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQI 186 (621)
Q Consensus 127 V~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l~~sw~~si~~L~~C~~l~~~Ae~~~i 186 (621)
+..|+.+|++|+|++ |.+.|+.||.+.+ ...||..++.+|+.|++
T Consensus 105 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 105 ADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 149 (172)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHHHTC---------CTTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCcHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCc
Confidence 999999999999997 9999999999988 57899999999999995
No 4
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.87 E-value=1.9e-22 Score=177.22 Aligned_cols=104 Identities=16% Similarity=0.235 Sum_probs=93.2
Q ss_pred hhccCCCeeEEEEEcC----eEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeec
Q 007015 48 FVTSQIPTDLSIQVQD----VTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFN 123 (621)
Q Consensus 48 ~r~~~~~~DV~I~V~g----~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It 123 (621)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||...+.++. ..|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5678999999999998 89999999999999999999999887755 889999999 9999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 124 PNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 124 ~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
.+||..++.+|++++|+. |.+.|+.||.+.+
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999998 9999999998753
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.86 E-value=3.1e-23 Score=190.37 Aligned_cols=123 Identities=14% Similarity=0.092 Sum_probs=95.7
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCCc
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNN 126 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~N 126 (621)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+.++....|.|++++ +++|+.+++|+||+++.++.+|
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~ 95 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 95 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGT
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHH
Confidence 57778999999999999999999999999999999999988766556789999999 9999999999999999999999
Q ss_pred hhhHHHhhcccCcccccccccHHHHHHHHHHHHhhhhhhhHHHHhhhhhchHHHHHHhhh
Q 007015 127 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQI 186 (621)
Q Consensus 127 V~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l~~sw~~si~~L~~C~~l~~~Ae~~~i 186 (621)
+..++.+|++|+|++ |.+.|+.||.+.+ ...||..++.+|+.|++
T Consensus 96 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 96 ADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred HHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 999999999999998 9999999999988 58899999999999985
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.86 E-value=3e-22 Score=179.42 Aligned_cols=103 Identities=16% Similarity=0.272 Sum_probs=94.0
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCCc
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNN 126 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~N 126 (621)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.++....|.|++++ +++|+.+++|+|||++.++.+|
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~ 95 (120)
T 2if5_A 18 EQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTAN 95 (120)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGG
T ss_pred HHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHH
Confidence 57888999999999999999999999999999999999998877677889999999 9999999999999999999999
Q ss_pred hhhHHHhhcccCcccccccccHHHHHHHHHH
Q 007015 127 IAPLRCASEFLDMSEEYEDGNLISKTEAFLT 157 (621)
Q Consensus 127 V~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~ 157 (621)
+..|+.||++|+|++ |++.|++||+
T Consensus 96 ~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 96 VGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 999999999999998 9999999984
No 7
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.85 E-value=2.6e-22 Score=180.37 Aligned_cols=102 Identities=20% Similarity=0.185 Sum_probs=93.7
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPN 125 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~ 125 (621)
..++.++.+|||+|.|+|++|++||.+|+++|+||++||..++ ...|.|++++ +++|+.+++|+|||++.++.+
T Consensus 16 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~ 89 (119)
T 3b84_A 16 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSG 89 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHH
Confidence 3578899999999999999999999999999999999998765 4589999999 999999999999999999999
Q ss_pred chhhHHHhhcccCcccccccccHHHHHHHHHHHH
Q 007015 126 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLV 159 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~ 159 (621)
||..|+.||++|+|++ |.+.|++||.+.
T Consensus 90 ~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 90 NRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 9999999999999998 999999999764
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.85 E-value=6.6e-22 Score=179.07 Aligned_cols=103 Identities=22% Similarity=0.329 Sum_probs=98.0
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEe-cCCCCCHHHHHHHHHhhcCCCeeecCC
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPN 125 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L-~~~pGG~~~felll~FcYt~~i~It~~ 125 (621)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+.+ ....|.| ++++ +++|+.+++|+|||++.++.+
T Consensus 22 ~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~~~~~ 98 (127)
T 1r29_A 22 RLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSRLNLREG 98 (127)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCCcCcCHH
Confidence 57889999999999999999999999999999999999998877 6788999 9999 999999999999999999999
Q ss_pred chhhHHHhhcccCcccccccccHHHHHHHHHHH
Q 007015 126 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL 158 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~ 158 (621)
||..|+.||++|+|++ |.+.|+.||.+
T Consensus 99 ~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 99 NIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 9999999999999998 99999999975
No 9
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=4.3e-22 Score=185.35 Aligned_cols=119 Identities=18% Similarity=0.176 Sum_probs=98.5
Q ss_pred cCcccccchhhhhccchhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCC--CCcccEEecCCCCCHHH
Q 007015 30 PNRFITIADSFEKKEHSWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSIS--NLGYDLKLENFPGGSET 107 (621)
Q Consensus 30 p~~~~~~~~~~~~~~~~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e--~~~~~v~L~~~pGG~~~ 107 (621)
+.+....+..+...- ..++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+.+ +....|.|++++ +++
T Consensus 24 ~~~~~~h~~~l~~~l-~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~ 100 (144)
T 2ppi_A 24 AVSDPQHAARLLRAL-SSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMV 100 (144)
T ss_dssp CCCCTTHHHHHHHHH-HHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHH
T ss_pred eecCcchHHHHHHHH-HHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHH
Confidence 333344444444333 357889999999999999999999999999999999999886653 356789999999 999
Q ss_pred HHHHHHhhcCCCeeecCCchhhHHHhhcccCcccccccccHHHHHHHHHH
Q 007015 108 FEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLT 157 (621)
Q Consensus 108 felll~FcYt~~i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~ 157 (621)
|+.+++|+|||++.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 101 f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 101 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999999999999999999999998 8999999974
No 10
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.6e-22 Score=175.97 Aligned_cols=101 Identities=17% Similarity=0.298 Sum_probs=93.2
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEec--CCCCCHHHHHHHHHhhcCCCeeec
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLE--NFPGGSETFEIILKFCYGLPIAFN 123 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~--~~pGG~~~felll~FcYt~~i~It 123 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+|||++.++
T Consensus 14 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~~ 87 (116)
T 2vpk_A 14 NKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVK--ADGFQKLLEFIYTGTLNLD 87 (116)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCC--HHHHHHHHHHHcCCCcccC
Confidence 357889999999999999999999999999999999999876 24578888 999 9999999999999999999
Q ss_pred CCchhhHHHhhcccCcccccccccHHHHHHHHHHH
Q 007015 124 PNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL 158 (621)
Q Consensus 124 ~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~ 158 (621)
.+||..|+.||++|||++ |++.|++||.+
T Consensus 88 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 88 SWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 999999999999999997 99999999853
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.85 E-value=9.7e-22 Score=176.94 Aligned_cols=101 Identities=19% Similarity=0.272 Sum_probs=94.6
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPN 125 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~ 125 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.++ ..+|.|++++ +++|+.+++|+|||++.++.+
T Consensus 20 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~ 92 (121)
T 1buo_A 20 NQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLS--PKTFQQILEYAYTATLQAKAE 92 (121)
T ss_dssp HHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGG
T ss_pred HHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHH
Confidence 357888999999999999999999999999999999999863 4579999999 999999999999999999999
Q ss_pred chhhHHHhhcccCcccccccccHHHHHHHHHHHH
Q 007015 126 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLV 159 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~ 159 (621)
|+..++.||++|+|++ |.+.|+.||.+.
T Consensus 93 ~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 93 DLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp GHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 9999999999999997 999999999874
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.85 E-value=4e-22 Score=183.32 Aligned_cols=103 Identities=18% Similarity=0.193 Sum_probs=92.4
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPN 125 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~ 125 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+ ..+|.|++++ +++|+.+++|+||+++.|+.+
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~ 90 (135)
T 2yy9_A 17 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSG 90 (135)
T ss_dssp HHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHH
Confidence 3588899999999999999999999999999999999998765 4579999999 999999999999999999999
Q ss_pred chhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 126 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
||..|+.||++|||++ |++.|++||.+.+
T Consensus 91 ~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l 119 (135)
T 2yy9_A 91 NRDQVLLAAKELRVPE------AVELCQSFQPQTS 119 (135)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHCCC---
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHHHHhc
Confidence 9999999999999998 9999999998876
No 13
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.84 E-value=6.2e-22 Score=182.36 Aligned_cols=107 Identities=17% Similarity=0.293 Sum_probs=98.5
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEec-CCCCCHHHHHHHHHhhcCCCeeecC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNP 124 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~-~~pGG~~~felll~FcYt~~i~It~ 124 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+.+ ...|.|+ +++ +++|+.+++|+|||++.|+.
T Consensus 28 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~ 103 (138)
T 2z8h_A 28 NDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA--ELTVTLPEEVT--VKGFEPLIQFAYTAKLILSK 103 (138)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT--TEEEECCTTSC--HHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC--CceEEeCCCCC--HHHHHHHHHHhcCCCcccCH
Confidence 357889999999999999999999999999999999999987764 4578895 899 99999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccccHHHHHHHHHHHHhhh
Q 007015 125 NNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILS 162 (621)
Q Consensus 125 ~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l~~ 162 (621)
+||..|+.||++|||++ |++.|+.||.+.+..
T Consensus 104 ~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 104 DNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLD 135 (138)
T ss_dssp TTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSC
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHHHHhccc
Confidence 99999999999999998 899999999887643
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.84 E-value=4.6e-22 Score=179.60 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=92.8
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecC-CCCCHHHHHHHHHhhcCCCeeecC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLEN-FPGGSETFEIILKFCYGLPIAFNP 124 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~-~pGG~~~felll~FcYt~~i~It~ 124 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||...+.+ ...|.|++ ++ +++|+.+++|+|||++.++.
T Consensus 24 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~~~ 99 (125)
T 3ohu_A 24 NDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVT--ARGFGPLLQFAYTAKLLLSR 99 (125)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCC--HHHHHHHHHHHTTSEEEECT
T ss_pred HHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCC--HHHHHHHHHhHcCCceEECH
Confidence 357889999999999999999999999999999999999987764 56899998 99 99999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccccHHHHHHHHH
Q 007015 125 NNIAPLRCASEFLDMSEEYEDGNLISKTEAFL 156 (621)
Q Consensus 125 ~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL 156 (621)
+||..|+.||++|+|++ |.+.|++||
T Consensus 100 ~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 100 ENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp TTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 99999999999999998 666688775
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.83 E-value=1.4e-21 Score=175.71 Aligned_cols=99 Identities=20% Similarity=0.312 Sum_probs=92.2
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPN 125 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~ 125 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+|||++.++.+
T Consensus 19 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~~~ 91 (119)
T 2q81_A 19 NQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISN--AAGLGQVLEFMYTAKLSLSPE 91 (119)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCC--HHHHHHHHHHHHHSCCCCCTT
T ss_pred HHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHHHcCCCCccCHH
Confidence 357889999999999999999999999999999999999862 3468888888 999999999999999999999
Q ss_pred chhhHHHhhcccCcccccccccHHHHHHHHHH
Q 007015 126 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLT 157 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~ 157 (621)
||..|+.||++|+|++ |++.|+.||.
T Consensus 92 ~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 92 NVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999998 9999999985
No 16
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.83 E-value=1e-21 Score=178.72 Aligned_cols=101 Identities=23% Similarity=0.350 Sum_probs=86.9
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEec-CCCCCHHHHHHHHHhhcCCCeeecCC
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPN 125 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~-~~pGG~~~felll~FcYt~~i~It~~ 125 (621)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+|||++.++.+
T Consensus 26 ~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~ 99 (129)
T 3ga1_A 26 EQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVG 99 (129)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTT
T ss_pred HHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHH
Confidence 57788999999999999999999999999999999999876 35689996 899 999999999999999999999
Q ss_pred chhhHHHhhcccCcccccccccHHHHHHHHHHHH
Q 007015 126 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLV 159 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~ 159 (621)
||..|+.||++|||++ |++.|++||.+.
T Consensus 100 ~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 100 DQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp THHHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 9999999999999998 666799999875
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.83 E-value=8.5e-22 Score=178.26 Aligned_cols=102 Identities=19% Similarity=0.303 Sum_probs=91.4
Q ss_pred hhhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEe-cCCCCCHHHHHHHHHhhcCCCeeecC
Q 007015 46 SWFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNP 124 (621)
Q Consensus 46 ~w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L-~~~pGG~~~felll~FcYt~~i~It~ 124 (621)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ ...|.| .+++ +++|+.+++|+|||++.++.
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e--~~~i~l~~~v~--~~~f~~lL~~iYtg~~~i~~ 96 (124)
T 2ihc_A 21 NDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG--ELNITLPEEVT--VKGFEPLIQFAYTAKLILSK 96 (124)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC-----CEEEECCTTSC--HHHHHHHHHHHHHSEEEEET
T ss_pred HHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC--CceEeecCCcC--HHHHHHHHHHhcCCCcccCH
Confidence 467889999999999999999999999999999999999987764 357888 5899 99999999999999999999
Q ss_pred CchhhHHHhhcccCcccccccccHHHHHHHHHH
Q 007015 125 NNIAPLRCASEFLDMSEEYEDGNLISKTEAFLT 157 (621)
Q Consensus 125 ~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~ 157 (621)
+||..|+.||++|||++ |++.|+.||.
T Consensus 97 ~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 97 ENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp TTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred HHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 99999999999999998 6677999875
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.83 E-value=2.1e-21 Score=175.56 Aligned_cols=94 Identities=22% Similarity=0.238 Sum_probs=86.3
Q ss_pred hhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCCch
Q 007015 48 FVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNI 127 (621)
Q Consensus 48 ~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~NV 127 (621)
.|.++.+|||+|.|+|+.|++||.+||++|+||++ ....|.|++++ +++|+.+++|+|||++.|+.+||
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v 92 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGEL 92 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHH
Confidence 36779999999999999999999999999999985 24578999999 99999999999999999999999
Q ss_pred hhHHHhhcccCcccccccccHHHHHHHHHHH
Q 007015 128 APLRCASEFLDMSEEYEDGNLISKTEAFLTL 158 (621)
Q Consensus 128 ~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~ 158 (621)
..|+.||++|||+. |++.|++++.+
T Consensus 93 ~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 93 RPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 99999999999998 89999999875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.81 E-value=1.9e-20 Score=193.54 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=115.5
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCCc
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNN 126 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~N 126 (621)
.++.++.+|||+|.|+|++|++||.+||++|+||++||...+.++...+|.|++++ +++|+.+++|+||+++.++.+|
T Consensus 167 ~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~ 244 (312)
T 3hqi_A 167 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKM 244 (312)
T ss_dssp HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHH
T ss_pred HHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHH
Confidence 46678999999999999999999999999999999999998888777899999999 9999999999999999999999
Q ss_pred hhhHHHhhcccCcccccccccHHHHHHHHHHHHhhhhhhhHHHHhhhhhchHHHHHHhhh---hHhhHHHHH
Q 007015 127 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQI---VRRCCDSIA 195 (621)
Q Consensus 127 V~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l~~sw~~si~~L~~C~~l~~~Ae~~~i---v~rCidsLa 195 (621)
+..|+.||++++|+. |...|+.||.+.+ ...||..++.+|+.|++ ...|++-|+
T Consensus 245 ~~~ll~~A~~~~~~~------l~~~c~~~l~~~~---------~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 301 (312)
T 3hqi_A 245 ADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSADQLKTQAVDFIN 301 (312)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHHTTC---------CTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHH------HHHHHHHHHHccC---------CHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999997 9999999999887 57899999999999974 444444444
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.76 E-value=3.4e-19 Score=159.84 Aligned_cols=88 Identities=22% Similarity=0.266 Sum_probs=83.2
Q ss_pred hhhccCCCeeEEEEEcCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCCe-eecCC
Q 007015 47 WFVTSQIPTDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPI-AFNPN 125 (621)
Q Consensus 47 w~r~~~~~~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~i-~It~~ 125 (621)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||..+ ...|.|++++ +++|+.+++|+|||++ .++.+
T Consensus 24 ~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~ 96 (116)
T 3fkc_A 24 EQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSD 96 (116)
T ss_dssp HHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHH
T ss_pred HHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHH
Confidence 57788999999999999999999999999999999999874 4589999999 9999999999999999 79999
Q ss_pred chhhHHHhhcccCccc
Q 007015 126 NIAPLRCASEFLDMSE 141 (621)
Q Consensus 126 NV~~L~~AA~~LqM~e 141 (621)
||..++.||++|||+.
T Consensus 97 ~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 97 LLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhCccc
Confidence 9999999999999986
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.46 E-value=3.5e-14 Score=134.66 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=83.7
Q ss_pred EEEEE-cCeEEeecccccccccHHHHHhhcC-CCC-CCCcccEEecCCCCCHHHHHHHHHhhcCCC--------------
Q 007015 57 LSIQV-QDVTFTVHKYPLMSKCGYIARLELQ-PSI-SNLGYDLKLENFPGGSETFEIILKFCYGLP-------------- 119 (621)
Q Consensus 57 V~I~V-~g~~F~~HK~vLas~S~YFr~lf~~-~~~-e~~~~~v~L~~~pGG~~~felll~FcYt~~-------------- 119 (621)
|+|.. +|+.|.+||.+ |++|+||+.||.. +.. ++....|.|++|+ +.+++.|++|||+.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 67765 79999999999 9999999999987 544 4455689999999 999999999999988
Q ss_pred ------------eeecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 120 ------------IAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 120 ------------i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
+.|+.+|+..|+.||.||+|.. |++.|+.|+...+
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i 126 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMI 126 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 8999999999999999999997 9999999999988
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.27 E-value=3.7e-12 Score=111.21 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=66.3
Q ss_pred EEEEE-cCeEEeecccccccccHHHHHhhcC--CCCCCCcccEEecCCCCCHHHHHHHHHhhc-----C---CCee---e
Q 007015 57 LSIQV-QDVTFTVHKYPLMSKCGYIARLELQ--PSISNLGYDLKLENFPGGSETFEIILKFCY-----G---LPIA---F 122 (621)
Q Consensus 57 V~I~V-~g~~F~~HK~vLas~S~YFr~lf~~--~~~e~~~~~v~L~~~pGG~~~felll~FcY-----t---~~i~---I 122 (621)
|+|.- +|++|.+||.+ |++|+||++||.. ...|+....|.|++|+ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 68999999999 9999999999987 4445456789999999 999999999999 5 6787 9
Q ss_pred cCCchhhHHHhhcccCc
Q 007015 123 NPNNIAPLRCASEFLDM 139 (621)
Q Consensus 123 t~~NV~~L~~AA~~LqM 139 (621)
+.+|+.+|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.12 E-value=5e-11 Score=110.94 Aligned_cols=91 Identities=15% Similarity=0.211 Sum_probs=82.0
Q ss_pred EEEEE-cCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCC----------------
Q 007015 57 LSIQV-QDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------- 119 (621)
Q Consensus 57 V~I~V-~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~---------------- 119 (621)
|+|.. +|+.|.+|+.+ |.+|+||+.||.... ...|.|++|+ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccch
Confidence 67776 78999999998 899999999998632 3479999999 999999999999865
Q ss_pred ----------eeecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 120 ----------IAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 120 ----------i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
+.++.+++.+|+.||.||+|.. |++.|+.|+...+
T Consensus 77 ~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 121 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMI 121 (141)
T ss_dssp ----HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHH
Confidence 7899999999999999999997 9999999999987
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.96 E-value=7.1e-11 Score=112.17 Aligned_cols=92 Identities=15% Similarity=0.271 Sum_probs=51.9
Q ss_pred EEEEE-cCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCC----------------
Q 007015 57 LSIQV-QDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------- 119 (621)
Q Consensus 57 V~I~V-~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~---------------- 119 (621)
|+|.. +|+.|.+|+.+ |.+|+||+.||.... ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSC--HHHHHHHHHC---------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCc--HHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 66664 79999999998 899999999998753 23479999999 999999999999976
Q ss_pred -----------eeecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 120 -----------IAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 120 -----------i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
+.++..++..|+.||.||+|.. |++.|+.|+...+
T Consensus 80 ~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 80 DDDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp ---------------------CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred cchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 5799999999999999999997 9999999999887
No 25
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.41 E-value=1.5e-07 Score=81.96 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=65.0
Q ss_pred EEEEE-cCeEEeecccccccccHHHHHhhcCC-C-CCCCcccEEecCCCCCHHHHHHHHHhhcCCC-----------eee
Q 007015 57 LSIQV-QDVTFTVHKYPLMSKCGYIARLELQP-S-ISNLGYDLKLENFPGGSETFEIILKFCYGLP-----------IAF 122 (621)
Q Consensus 57 V~I~V-~g~~F~~HK~vLas~S~YFr~lf~~~-~-~e~~~~~v~L~~~pGG~~~felll~FcYt~~-----------i~I 122 (621)
|+|.- +|+.|.+|+.+ |..|++|+.|+... . .+.....|.|++|+ +.+++.+++|||.-+ ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 78999999996 89999999999863 2 23344689999999 999999999998632 478
Q ss_pred cCCchhhHHHhhcccCc
Q 007015 123 NPNNIAPLRCASEFLDM 139 (621)
Q Consensus 123 t~~NV~~L~~AA~~LqM 139 (621)
..+.+.+|+.||+||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 89999999999999985
No 26
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.40 E-value=1.8e-07 Score=82.02 Aligned_cols=79 Identities=11% Similarity=0.157 Sum_probs=67.0
Q ss_pred EEEEE-cCeEEeecccccccccHHHHHhhcCCCCCCCcccEEecCCCCCHHHHHHHHHhhcCCC--------------ee
Q 007015 57 LSIQV-QDVTFTVHKYPLMSKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------IA 121 (621)
Q Consensus 57 V~I~V-~g~~F~~HK~vLas~S~YFr~lf~~~~~e~~~~~v~L~~~pGG~~~felll~FcYt~~--------------i~ 121 (621)
|+|.- +|+.|.+|+.+ |..|++|+.|+..+. +.....|.|++|+ +.+++.+++|||.-+ ..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 67776 78999999996 899999999998754 3344689999999 999999999999632 36
Q ss_pred ecCCchhhHHHhhcccCc
Q 007015 122 FNPNNIAPLRCASEFLDM 139 (621)
Q Consensus 122 It~~NV~~L~~AA~~LqM 139 (621)
+..+.+.+|+.||.||++
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 777889999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.26 E-value=8.7e-07 Score=84.85 Aligned_cols=96 Identities=10% Similarity=0.146 Sum_probs=77.2
Q ss_pred eEEEEE-cCeEEeecccccccccHHHHHhhcCCCCC----CCcccEEecCCCCCHHHHHHHHHhhcCCC-----------
Q 007015 56 DLSIQV-QDVTFTVHKYPLMSKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLP----------- 119 (621)
Q Consensus 56 DV~I~V-~g~~F~~HK~vLas~S~YFr~lf~~~~~e----~~~~~v~L~~~pGG~~~felll~FcYt~~----------- 119 (621)
-|+|+- +|+.|.+++.+ |..|++++.|+.....+ .....|.|++|+ +.+++.|+.|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 68999999997 78899999999864321 123679999999 999999999998632
Q ss_pred --------------eeecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 120 --------------IAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 120 --------------i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
+.+....+..|+.||.||+|.. |++.||.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 3567788899999999999997 9999999998766
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.77 E-value=9.7e-06 Score=72.65 Aligned_cols=80 Identities=18% Similarity=0.239 Sum_probs=63.3
Q ss_pred EEEE-EcCeEEeecccccccccHHHHHhhcCCC--CCCCcccEEecCCCCCHHHHHHHHHhhcCCC-----------eee
Q 007015 57 LSIQ-VQDVTFTVHKYPLMSKCGYIARLELQPS--ISNLGYDLKLENFPGGSETFEIILKFCYGLP-----------IAF 122 (621)
Q Consensus 57 V~I~-V~g~~F~~HK~vLas~S~YFr~lf~~~~--~e~~~~~v~L~~~pGG~~~felll~FcYt~~-----------i~I 122 (621)
|+|. .+|+.|.+++. .|..|+.++.|+.... .+.....|.|++|+ +.+++.|++|||--+ ..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 5666 47899999999 5789999999998632 23233579999999 999999999998522 367
Q ss_pred cCCchhhHHHhhcccCc
Q 007015 123 NPNNIAPLRCASEFLDM 139 (621)
Q Consensus 123 t~~NV~~L~~AA~~LqM 139 (621)
....+.+|+.||.||++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88899999999999986
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.73 E-value=9e-05 Score=65.54 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=72.7
Q ss_pred eEEEEEcCeEEeeccccccccc-HHHHHhhcCCCC----CCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecC-Cchhh
Q 007015 56 DLSIQVQDVTFTVHKYPLMSKC-GYIARLELQPSI----SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNP-NNIAP 129 (621)
Q Consensus 56 DV~I~V~g~~F~~HK~vLas~S-~YFr~lf~~~~~----e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~-~NV~~ 129 (621)
=|+|.|||+.|...+..|.... .+|.+||..... .....++-+ |-+ |+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRd--p~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSC--HHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCC--hHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999885 588999875421 112234554 556 99999999999999998744 34578
Q ss_pred HHHhhcccCcccccccccHHHHHHHHHH
Q 007015 130 LRCASEFLDMSEEYEDGNLISKTEAFLT 157 (621)
Q Consensus 130 L~~AA~~LqM~e~~~~~NL~~~ce~FL~ 157 (621)
++..|+|+++++ |++.|++-+.
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHh
Confidence 999999999998 8888877554
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.52 E-value=1.7e-05 Score=69.67 Aligned_cols=74 Identities=9% Similarity=-0.024 Sum_probs=55.8
Q ss_pred HhhhhhchHHHHHHhhhhHhhHHHHHHHhcccC-ccchhhhcccccchhcccccCHHHHHHHHHHHhhcCCChhhHHHHH
Q 007015 170 VLKSCKNLSPWAENLQIVRRCCDSIAWKASREN-STTEDIANRQGWWFDDVATLGIDHFMRIITTIKVKGTKPEIIGKCI 248 (621)
Q Consensus 170 ~L~~C~~l~~~Ae~~~iv~rCidsLa~ka~~~~-~~~~~l~~~~dwW~eDl~~Ls~d~~~rlI~am~~~~~~ee~I~~al 248 (621)
.+.||.+++.+|+.|++ ..|..+|.... .+|..+. ..++|..|+.+.+..+|+.. ..+|+.|++|+
T Consensus 9 ~~~NCl~i~~~A~~~~~-----~~L~~~a~~fi~~nF~~v~-----~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av 75 (105)
T 2eqx_A 9 QVGNCLQVMWLADRHSD-----PELYTAAKHCAKTHLAQLQ-----NTEEFLHLPHRLLTDIISDG---VPCSQNPTEAI 75 (105)
T ss_dssp CTTTHHHHHHHHHHTTC-----HHHHHHHHHHHHHTCHHHH-----TSHHHHHSCHHHHHHHHHTC---EETTSCHHHHH
T ss_pred CHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHHHHHHH-----hcccHhhCCHHHHHHHHcCC---CCCHHHHHHHH
Confidence 47899999999999996 56665554433 2343332 36899999999999999763 34788999999
Q ss_pred HHHHHHhc
Q 007015 249 MHYAKKWL 256 (621)
Q Consensus 249 ~~Yak~~L 256 (621)
++|+++..
T Consensus 76 ~~Wv~~d~ 83 (105)
T 2eqx_A 76 EAWINFNK 83 (105)
T ss_dssp HHHHHTTH
T ss_pred HHHHHcCH
Confidence 99997543
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.35 E-value=0.0077 Score=59.16 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=73.0
Q ss_pred eEEEEEcCeEEeeccccccccc-HHHHHhhcCCCC----CCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecC-Cchhh
Q 007015 56 DLSIQVQDVTFTVHKYPLMSKC-GYIARLELQPSI----SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNP-NNIAP 129 (621)
Q Consensus 56 DV~I~V~g~~F~~HK~vLas~S-~YFr~lf~~~~~----e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~-~NV~~ 129 (621)
=|+|.|||..|...+..|.... .+|.+||..... .....++-| |-+ |..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRD--P~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSC--STTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCC--hHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 3678999999999999998774 488999875321 112234554 445 89999999999999998744 34577
Q ss_pred HHHhhcccCcccccccccHHHHHHHHHHHH
Q 007015 130 LRCASEFLDMSEEYEDGNLISKTEAFLTLV 159 (621)
Q Consensus 130 L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~ 159 (621)
++.-|+|+++++ |+..|+.-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999997 888888887654
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.40 E-value=0.004 Score=55.89 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=62.1
Q ss_pred EEEEEcCeEEeeccccccccc-HHHHHhhcCCCC-CCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecC-CchhhHHHh
Q 007015 57 LSIQVQDVTFTVHKYPLMSKC-GYIARLELQPSI-SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNP-NNIAPLRCA 133 (621)
Q Consensus 57 V~I~V~g~~F~~HK~vLas~S-~YFr~lf~~~~~-e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~-~NV~~L~~A 133 (621)
|+|.|||..|...+..|.... ..|.+||..... .....++-| |=+ |..|+.|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRd--p~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRH--PGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSC--TTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecC--hHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 789999999999999998763 345666654210 012344554 344 88999999999999998755 357889999
Q ss_pred hcccCcccc
Q 007015 134 SEFLDMSEE 142 (621)
Q Consensus 134 A~~LqM~e~ 142 (621)
|+|+++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999984
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.76 E-value=0.034 Score=50.47 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=57.9
Q ss_pred eEEEEEcCeEEeecccccccccHHHHHhhcCCCC----CCCcccEEecCCCCCHHHHHHHHHhhcCCCeeecCC-chhhH
Q 007015 56 DLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSI----SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPN-NIAPL 130 (621)
Q Consensus 56 DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~----e~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~~-NV~~L 130 (621)
=|+|.|||..|..-+..|...-+ .|+....+ .....++-| |=+ |..|+.|++|.-+|++.+..+ .+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRd--p~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRD--PEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSC--HHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCC--hHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 37889999999998888865432 13332110 012334554 335 999999999999999987543 57889
Q ss_pred HHhhcccCcccc
Q 007015 131 RCASEFLDMSEE 142 (621)
Q Consensus 131 ~~AA~~LqM~e~ 142 (621)
+.-|+|+++++.
T Consensus 88 ~~Ea~fy~i~~l 99 (124)
T 1s1g_A 88 DDELAFYGILPE 99 (124)
T ss_dssp HHHHHHTTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999984
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.96 E-value=0.046 Score=47.77 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=57.4
Q ss_pred EEEEEcCeEEeeccccccccc-HHHHHhhcCC--CCCCCcccEEecCCCCCHHHHHHHHHhhcC-CCeeecC-CchhhHH
Q 007015 57 LSIQVQDVTFTVHKYPLMSKC-GYIARLELQP--SISNLGYDLKLENFPGGSETFEIILKFCYG-LPIAFNP-NNIAPLR 131 (621)
Q Consensus 57 V~I~V~g~~F~~HK~vLas~S-~YFr~lf~~~--~~e~~~~~v~L~~~pGG~~~felll~FcYt-~~i~It~-~NV~~L~ 131 (621)
|+|.|||..|...+..|...- ..+.+|+... ... ...++-+ |=. |..|+.|++|.-+ |++.+.. -.+..++
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~-~~~eyFi-DRd--p~~F~~ILnflR~~G~l~~p~~~~~~~~~ 78 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDP-LRNEYFF-DRN--RPSFDAILYFYQSGGRLRRPVNVPLDVFS 78 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEET-TTTEEEE-CSC--STTHHHHHHHHHTTSCCCCCTTSCHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCC-CceeEEE-cCC--hHHHHHHHHHHhcCCcccCCCCCCHHHHH
Confidence 789999999999988886542 1233344321 011 2335555 334 7899999999998 8987643 3568899
Q ss_pred HhhcccCcccc
Q 007015 132 CASEFLDMSEE 142 (621)
Q Consensus 132 ~AA~~LqM~e~ 142 (621)
.-|+|+++.+.
T Consensus 79 ~Ea~fy~i~~~ 89 (100)
T 1t1d_A 79 EEIKFYELGEN 89 (100)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHHcCCCHH
Confidence 99999999973
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.14 E-value=0.029 Score=49.34 Aligned_cols=80 Identities=14% Similarity=0.127 Sum_probs=57.1
Q ss_pred EEEEEcCeEEeecccccccccHHHHHhhcCCCCC----CCcccEEecCCCCCHHHHHHHHHhhcCCCeeecC-CchhhHH
Q 007015 57 LSIQVQDVTFTVHKYPLMSKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNP-NNIAPLR 131 (621)
Q Consensus 57 V~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e----~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~-~NV~~L~ 131 (621)
|+|.|||..|...+..|...-+ .|+....+. ....++-+ |=+ |+.|+.|++|.-+|++.+.. ..+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRd--p~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRD--PDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSC--TTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCC--cHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999888865432 133321110 01234444 334 89999999999999988754 3578899
Q ss_pred HhhcccCcccc
Q 007015 132 CASEFLDMSEE 142 (621)
Q Consensus 132 ~AA~~LqM~e~ 142 (621)
.-|+|+++++.
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999984
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.95 E-value=0.044 Score=50.75 Aligned_cols=82 Identities=13% Similarity=0.111 Sum_probs=58.3
Q ss_pred eeEEEEEcCeEEeecccccccccHHHHHhhcCCCCC----CCcccEEecCCCCCHHHHHHHHHhhcCCCeeecC-Cchhh
Q 007015 55 TDLSIQVQDVTFTVHKYPLMSKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNP-NNIAP 129 (621)
Q Consensus 55 ~DV~I~V~g~~F~~HK~vLas~S~YFr~lf~~~~~e----~~~~~v~L~~~pGG~~~felll~FcYt~~i~It~-~NV~~ 129 (621)
.=|+|.|||..|...+..|...-+ .|+....+. ....++-| |=+ +..|+.|++|.-+|++.+.. ..+..
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRd--p~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRD--PEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSC--HHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCC--cHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 347899999999999888865432 133321110 12234444 335 99999999999999998754 35788
Q ss_pred HHHhhcccCcccc
Q 007015 130 LRCASEFLDMSEE 142 (621)
Q Consensus 130 L~~AA~~LqM~e~ 142 (621)
++.-|+|+++++.
T Consensus 109 l~eEa~fy~i~~l 121 (140)
T 2nz0_B 109 YDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999984
No 37
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=83.57 E-value=1.8 Score=33.62 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=30.5
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007015 534 SIEIKNLREELENVKTRMAELQKDYSELQREYEK 567 (621)
Q Consensus 534 ~~e~~~lk~el~~m~~rv~eLe~~~~~m~~~~~k 567 (621)
.-|.+.||.|++.+|.++.+|.+++..++.++++
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4588999999999999999999999999988764
No 38
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=82.80 E-value=2.3 Score=32.38 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=31.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007015 535 IEIKNLREELENVKTRMAELQKDYSELQREYEKLSN 570 (621)
Q Consensus 535 ~e~~~lk~el~~m~~rv~eLe~~~~~m~~~~~k~~~ 570 (621)
+.+-.||.--+.+=++|.+||..|..+.||++++.+
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 445678888889999999999999999999999864
No 39
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=75.61 E-value=5.4 Score=30.54 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=33.5
Q ss_pred CchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007015 532 STSIEIKNLREELENVKTRMAELQKDYSELQREYEKLS 569 (621)
Q Consensus 532 ~~~~e~~~lk~el~~m~~rv~eLe~~~~~m~~~~~k~~ 569 (621)
.++.||-.||.|++.=...++.||.|-+.||.-+..+.
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq 51 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQ 51 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHc
Confidence 46789999999999999999999999999998776553
No 40
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=71.67 E-value=5.2 Score=31.15 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=28.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007015 537 IKNLREELENVKTRMAELQKDYSELQREYEKLSN 570 (621)
Q Consensus 537 ~~~lk~el~~m~~rv~eLe~~~~~m~~~~~k~~~ 570 (621)
...||.--..+=.+|.+||-.|..|.|||+++.+
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456665667778999999999999999999875
No 41
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=64.49 E-value=7 Score=33.63 Aligned_cols=27 Identities=15% Similarity=0.353 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007015 541 REELENVKTRMAELQKDYSELQREYEK 567 (621)
Q Consensus 541 k~el~~m~~rv~eLe~~~~~m~~~~~k 567 (621)
=.||+.||..|.|||..+..||+.+|.
T Consensus 49 i~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 49 LAEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999987764
No 42
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=63.98 E-value=1.6 Score=28.92 Aligned_cols=16 Identities=31% Similarity=0.374 Sum_probs=14.0
Q ss_pred CchhhHHHhhcccCcc
Q 007015 125 NNIAPLRCASEFLDMS 140 (621)
Q Consensus 125 ~NV~~L~~AA~~LqM~ 140 (621)
.||+.|+.||+||+=-
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5999999999999843
No 43
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=51.78 E-value=9.3 Score=33.82 Aligned_cols=33 Identities=6% Similarity=-0.023 Sum_probs=25.4
Q ss_pred hhcCCCCCChhHHHHHHHhcCCcccccchhhHHHHHHHHhhCCC
Q 007015 417 EVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKSHPS 460 (621)
Q Consensus 417 EiA~D~nL~~~kF~~Lae~lP~~aR~~~DgLYRAIDiYLK~Hp~ 460 (621)
|...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 45667788888886655 6889999999999984
No 44
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=50.81 E-value=9.6 Score=41.98 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=55.7
Q ss_pred eEEEEEcCeEEeecccccccccH-HHHHhhcCC--CCCCCcccEEecCCCCCHHHHHHHHHhhcC-CCeeecC-CchhhH
Q 007015 56 DLSIQVQDVTFTVHKYPLMSKCG-YIARLELQP--SISNLGYDLKLENFPGGSETFEIILKFCYG-LPIAFNP-NNIAPL 130 (621)
Q Consensus 56 DV~I~V~g~~F~~HK~vLas~S~-YFr~lf~~~--~~e~~~~~v~L~~~pGG~~~felll~FcYt-~~i~It~-~NV~~L 130 (621)
=|+|.|||..|...+..|...-+ .+-+++... .+. ...++-+ |=. |+.|+.+++|..+ |++.+.. -.+..+
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~-~~~~~f~-DR~--~~~F~~IL~~~r~~g~l~~p~~~~~~~~ 128 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDP-LRNEYFF-DRN--RPSFDAILYYYQSGGRLRRPVNVPLDIF 128 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEET-TTTEEEE-CSC--HHHHHHHHHHHHHTSCCCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCC-CCCCEEE-cCC--hHHHHHHHHHHhcCCccccCCcccHHHH
Confidence 47889999999988887754311 111122110 011 2234554 334 9999999999999 9987643 346778
Q ss_pred HHhhcccCcccc
Q 007015 131 RCASEFLDMSEE 142 (621)
Q Consensus 131 ~~AA~~LqM~e~ 142 (621)
..-|+|+++.+.
T Consensus 129 ~~E~~f~~i~~~ 140 (514)
T 2r9r_B 129 SEEIRFYELGEE 140 (514)
T ss_dssp HHHHHHTTCCHH
T ss_pred HHHHHhcCCCHH
Confidence 999999999884
No 45
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=37.40 E-value=76 Score=21.51 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=14.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007015 536 EIKNLREELENVKTRMAELQKDYSELQR 563 (621)
Q Consensus 536 e~~~lk~el~~m~~rv~eLe~~~~~m~~ 563 (621)
|+..||.|+..+|..+.-|.=|...++|
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4455555555555555544444444443
No 46
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=34.23 E-value=33 Score=28.25 Aligned_cols=32 Identities=16% Similarity=0.340 Sum_probs=25.4
Q ss_pred chHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007015 533 TSIEIKNLREELENVKTRMAELQKDYSELQRE 564 (621)
Q Consensus 533 ~~~e~~~lk~el~~m~~rv~eLe~~~~~m~~~ 564 (621)
.++|.+.||..|..+-.|+.+||.|+.-+|+-
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677888888888888888888888877643
No 47
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=33.79 E-value=62 Score=27.64 Aligned_cols=36 Identities=22% Similarity=0.330 Sum_probs=26.7
Q ss_pred chHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007015 533 TSIEIKNLREELENVKTRMAELQKDYSELQREYEKL 568 (621)
Q Consensus 533 ~~~e~~~lk~el~~m~~rv~eLe~~~~~m~~~~~k~ 568 (621)
+..|+..|+.+++.|+....++.++-..|++.++.+
T Consensus 53 LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 53 LENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677777777888877777777777777777765
No 48
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.01 E-value=32 Score=29.29 Aligned_cols=37 Identities=8% Similarity=-0.029 Sum_probs=32.4
Q ss_pred CCeeecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 118 LPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 118 ~~i~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
+.=.|+++|...++..|+.++.++ |.++|..|+.+..
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred hhccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 345689999999999999999987 8999999998765
No 49
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=30.80 E-value=67 Score=28.75 Aligned_cols=18 Identities=44% Similarity=0.545 Sum_probs=12.1
Q ss_pred CchHHHhHHHHHHHHHHH
Q 007015 532 STSIEIKNLREELENVKT 549 (621)
Q Consensus 532 ~~~~e~~~lk~el~~m~~ 549 (621)
.+.+|++.||.|+++++.
T Consensus 19 ~Lkreie~lk~ele~l~~ 36 (120)
T 3i00_A 19 RLYREISGLKAQLENMKT 36 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457777778777666543
No 50
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=28.48 E-value=91 Score=24.53 Aligned_cols=28 Identities=32% Similarity=0.408 Sum_probs=13.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007015 536 EIKNLREELENVKTRMAELQKDYSELQR 563 (621)
Q Consensus 536 e~~~lk~el~~m~~rv~eLe~~~~~m~~ 563 (621)
+.+.|+.+-..++.++..|++|...+++
T Consensus 31 ~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ 58 (63)
T 1ci6_A 31 ECKELEKKNEALKERADSLAKEIQYLKD 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444445544444443
No 51
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=28.30 E-value=72 Score=23.87 Aligned_cols=22 Identities=27% Similarity=0.555 Sum_probs=11.9
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHH
Q 007015 544 LENVKTR-MAELQKDYSELQREY 565 (621)
Q Consensus 544 l~~m~~r-v~eLe~~~~~m~~~~ 565 (621)
|+++|.. +.|+-+|...||+||
T Consensus 9 le~~KqEIL~E~RkElqK~K~EI 31 (45)
T 1use_A 9 LQRVKQELLEEVKKELQKVKEEI 31 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 455666666666665
No 52
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=27.90 E-value=33 Score=28.73 Aligned_cols=42 Identities=10% Similarity=0.191 Sum_probs=33.1
Q ss_pred cccchHHHHHHHHHHHhhhhhhhhhhcchhhHHHHhhHHHHHhhh
Q 007015 374 TMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEV 418 (621)
Q Consensus 374 tlyDvd~V~riv~~Fl~~~~~~~~~~~~~~~~~VakLvD~YLaEi 418 (621)
..++.+++.||+..+...+... -+..++.-||+++|-|..|.
T Consensus 7 ~~~~~~lI~ril~~~f~~~ktr---I~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 7 GGFRKETVERLLRLHFRDGRTR---VNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp CCCCHHHHHHHHHHHCCSTTCE---ECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccCccc---ccHHHHHHHHHHHHHHHHHH
Confidence 5789999999999876544321 24568899999999999996
No 53
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=25.31 E-value=54 Score=25.91 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=18.5
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007015 536 EIKNLREELENVKTRMAELQKDYSELQ 562 (621)
Q Consensus 536 e~~~lk~el~~m~~rv~eLe~~~~~m~ 562 (621)
-|..|-.|+..|+.++..||.|-..++
T Consensus 35 VN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 35 VNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 355666677777777777777766554
No 54
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=24.48 E-value=65 Score=31.18 Aligned_cols=34 Identities=9% Similarity=0.056 Sum_probs=30.2
Q ss_pred eecCCchhhHHHhhcccCcccccccccHHHHHHHHHHHHh
Q 007015 121 AFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 160 (621)
Q Consensus 121 ~It~~NV~~L~~AA~~LqM~e~~~~~NL~~~ce~FL~~~l 160 (621)
.++++|+..++..|+..++++ |.+.|..|+.+..
T Consensus 130 ~l~~~n~~~i~~~A~~~~~~~------L~~~~~~~i~~~f 163 (256)
T 3hve_A 130 CIAAENCIGIRDFALHYCLHH------VHYLATEYLETHF 163 (256)
T ss_dssp TCCSSTTHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred hCCHhhHHHHHHHHHHcCcHH------HHHHHHHHHHHHH
Confidence 478899999999999999887 8999999998765
No 55
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=23.22 E-value=86 Score=24.04 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=21.8
Q ss_pred CCCchHHHhHHHHHHHHHHHHHHHHHHHH
Q 007015 530 QPSTSIEIKNLREELENVKTRMAELQKDY 558 (621)
Q Consensus 530 ~~~~~~e~~~lk~el~~m~~rv~eLe~~~ 558 (621)
...+++||.+||..++.++.++.||....
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667788888888888888888877653
No 56
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=22.62 E-value=1.1e+02 Score=24.90 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=24.5
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007015 536 EIKNLREELENVKTRMAELQKDYSELQREYEKL 568 (621)
Q Consensus 536 e~~~lk~el~~m~~rv~eLe~~~~~m~~~~~k~ 568 (621)
=+..|+.+.+.|+..+.+|.++...+++++..+
T Consensus 48 YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 48 YIQYMRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 366777777777777778887777777777655
No 57
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=21.49 E-value=1.6e+02 Score=27.91 Aligned_cols=78 Identities=13% Similarity=0.232 Sum_probs=44.6
Q ss_pred CCCCHHHHHhhhcccccCCCCHHHhHHHhhCCCCCchhHHHHHHHHhhhhhhccccCCCCccCCCCCCCCCCCCchHHHh
Q 007015 459 PSLSEHDRRRLCKLMNCEKLSLDACTHAAQNDRLPLRTVVQVLFSEQVKMRTAMQETEPALQCDNSEQGDTQPSTSIEIK 538 (621)
Q Consensus 459 p~lse~Er~~lCr~~dc~KLS~eAc~HAaQNeRlPlr~vvQvLf~eQ~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 538 (621)
-+||++.+.++ .+-....+.++-|+|- -+...+.+|+..+....+. ...++
T Consensus 66 LnLT~EQq~ql-----------~~I~~e~r~~~~~Lr~---ql~akr~EL~aL~~a~~~D---------------eakI~ 116 (175)
T 3lay_A 66 SPLTTEQQATA-----------QKIYDDYYTQTSALRQ---QLISKRYEYNALLTASSPD---------------TAKIN 116 (175)
T ss_dssp --CCHHHHHHH-----------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTSSSCC---------------HHHHH
T ss_pred ccCCHHHHHHH-----------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhCCCCC---------------HHHHH
Confidence 46999999998 3444555555656653 3444455565555433221 33466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007015 539 NLREELENVKTRMAELQKDYSELQREYEKL 568 (621)
Q Consensus 539 ~lk~el~~m~~rv~eLe~~~~~m~~~~~k~ 568 (621)
+|-.|+..+|.+ |+.+-..++.+|.|-
T Consensus 117 aL~~Ei~~Lr~q---L~~~R~k~~~em~Ke 143 (175)
T 3lay_A 117 AVAKEMESLGQK---LDEQRVKRDVAMAQA 143 (175)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 666666666654 444555677777654
No 58
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=20.99 E-value=1.6e+02 Score=24.67 Aligned_cols=25 Identities=24% Similarity=0.437 Sum_probs=20.7
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHH
Q 007015 534 SIEIKNLREELENVKTRMAELQKDY 558 (621)
Q Consensus 534 ~~e~~~lk~el~~m~~rv~eLe~~~ 558 (621)
.+..+.|-.||..+|.||.|||.|-
T Consensus 18 ~~~~E~L~qEi~~Lr~kv~elEnEr 42 (81)
T 3qh9_A 18 QRKAEELLQELRHLKIKVEELENER 42 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456788899999999999999764
Done!