BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007016
(621 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IWF6|DEN6A_HUMAN Protein DENND6A OS=Homo sapiens GN=DENND6A PE=1 SV=1
Length = 608
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 279/568 (49%), Gaps = 76/568 (13%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP LT E+ + Y SFPDS N + D F
Sbjct: 61 WLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDS-----NSGCLGDTQFC 115
Query: 84 FRFQRHKNLPQGNVTPSEITEINDKITSSELTEEKLLKRSKSFSSSKGSRYFYGYVFNRQ 143
FRF++ V+ + + DK L K YFYGYV+ RQ
Sbjct: 116 FRFRQSSG---RRVSLHCLLDQFDKDLPVYL--------------KKDPAYFYGYVYFRQ 158
Query: 144 RHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVSIWPSPV 203
D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V WP+PV
Sbjct: 159 VRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPV 218
Query: 204 PGKLMELPIGNAMLKVNLPPAHSLPLESGM--LSEESAASVAPFLPYNQSIPQGLFHDSD 261
PGK + LPI ++KV +P H P + + L+++ +++ LP H+ D
Sbjct: 219 PGKTLHLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQVDTNISVILP--------TVHEVD 270
Query: 262 LFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFRPYFT 321
+F F + L +LWEL+L+GEP++V+AP+P + E V +LV+ I+PL DFRPYFT
Sbjct: 271 IFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFT 330
Query: 322 IHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAPNSNRVAFASRAS 381
IHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 331 IHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP------------ 376
Query: 382 SGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATTKPDTS 441
+G+I Q K L+ K +++SY D
Sbjct: 377 TGEIPK-------QVKVKKLKNLKTLD---------------SKPGVYTSYKPYLNRDEE 414
Query: 442 ILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPFVD 500
I+ +L R E+ SV ILRR+FLELT +F+ P Y + P + S SP+
Sbjct: 415 IIKQLQKGVQQKRPSEAQSV----ILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKS 470
Query: 501 PPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFQRRRAAAEQE 560
PP L F EF+ +L+ G L+ R++ +W+ LYR FLK PNF WF+ RR Q+
Sbjct: 471 PPQLRQFLPEEFMKTLEK--TGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQK 528
Query: 561 QHRLWRQARMRTDIQQLIAKMSELESVD 588
L +A D+ I K +E+E+VD
Sbjct: 529 LEALHLEALCEEDLLLWIQKHTEVETVD 556
>sp|Q8BH65|DEN6A_MOUSE Protein DENND6A OS=Mus musculus GN=Dennd6a PE=1 SV=1
Length = 605
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 282/568 (49%), Gaps = 76/568 (13%)
Query: 25 WVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHDCIFF 83
W+ C + FDLE GQ +E YP LT E+ + Y SFPDS N + D F
Sbjct: 58 WLHCVCVVGFDLELGQAVEVIYPQHSKLTDKEKTNICYLSFPDS-----NSGCLGDTQFC 112
Query: 84 FRFQRHKNLPQGNVTPSEITEINDKITSSELTEEKLLKRSKSFSSSKGSRYFYGYVFNRQ 143
FRF++ +++ L +E + K YFYGYV+ RQ
Sbjct: 113 FRFRQSS---------------GRRVSLHCLLDE--FDKDLPVYLKKDPAYFYGYVYFRQ 155
Query: 144 RHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVSIWPSPV 203
D+ LKRG QKSLV++S P+ F +L+ + P YF+ + +E + V WP+PV
Sbjct: 156 VRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPV 215
Query: 204 PGKLMELPIGNAMLKVNLPPAHSLPLESGM--LSEESAASVAPFLPYNQSIPQGLFHDSD 261
PGK + LPI ++KV +P H P + M L++++ + LP H+ D
Sbjct: 216 PGKTLHLPIMGLVMKVRIPTCHDKPGTTQMVQLTQQADTHTSIILP--------TVHEVD 267
Query: 262 LFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFRPYFT 321
LF F + L +LWEL+L+GEP++V+AP+P + E V +LV+ I+PL DFRPYFT
Sbjct: 268 LFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFT 327
Query: 322 IHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAPNSNRVAFASRAS 381
IHD +F + + P ++LGVTN FF K L+ PHI+ +G P
Sbjct: 328 IHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDLKP------------ 373
Query: 382 SGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATTKPDTS 441
+G+I P+ +++L + S K +++SY D
Sbjct: 374 AGEI---PKQVKVKKLKNLKTLDS-------------------KPGVYTSYKPYLNRDEE 411
Query: 442 ILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPFVD 500
I+ +L R E+ SV ILRR+FLELT +F+ P Y + P + S SP+
Sbjct: 412 IIKQLQKGIQQKRPSEAQSV----ILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKS 467
Query: 501 PPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFQRRRAAAEQE 560
PP L F EF+ +L+ G L+ ++ +W+ LYR+FLK PNF WF+ RR Q+
Sbjct: 468 PPQLRQFLPEEFMKTLEK--TGPQLTSGIKGDWIGLYRQFLKSPNFDGWFKTRRKEMTQK 525
Query: 561 QHRLWRQARMRTDIQQLIAKMSELESVD 588
L +A D+ I K +E+E+VD
Sbjct: 526 LEALHLEALCEEDLLLWIQKHTEVETVD 553
>sp|Q5F3L4|DEN6A_CHICK Protein DENND6A OS=Gallus gallus GN=DENND6A PE=2 SV=1
Length = 584
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 274/576 (47%), Gaps = 82/576 (14%)
Query: 20 ERMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIH 78
+R W+ C + FDLE GQ +E YPP LT E+ + Y SFPDS N +
Sbjct: 32 DRFSAWLHCVCVVGFDLELGQAVEVIYPPHSKLTDKEKTNICYLSFPDS-----NSGCLG 86
Query: 79 DCIFFFRFQRHKNLPQGNVTPSEITEINDKITSSELTEEKLLKRSKSFSSSKGSRYFYGY 138
D F FRF+R +S L R K Y+YGY
Sbjct: 87 DTQFCFRFRRSSGR-----------------KASLCCFLDHLDRDLPVYLKKDPAYYYGY 129
Query: 139 VFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVSI 198
V+ RQ D+ LKRG QKSLV++S P+ +FR +L+ + P YF+ + +E + S V
Sbjct: 130 VYFRQVRDKSLKRGYFQKSLVLISKLPYIHLFRTVLKQIAPEYFEKSEAFLEAVCSDVDR 189
Query: 199 WPSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLS--EESAASVAPFLPYNQSIPQGL 256
WP PVPG+++ LPI ++K+ +P P + ++ ++ A ++ LP
Sbjct: 190 WPPPVPGEVLHLPIMGVVMKLRIPTYRDKPGTTPVVQNMHQADAQISMTLP--------T 241
Query: 257 FHDSDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDF 316
H+ DLF F + + +LWEL+L+GEP++V+AP+P + E V +LVS I+PL DF
Sbjct: 242 VHEVDLFRCFCPVFFHIQMLWELVLLGEPLVVMAPSPAESSETVLALVSCISPLKYCSDF 301
Query: 317 RPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGS---PAPNSNR 373
RPYFTIHD +F + + P ++LGVTN FF K L+ PHI+ +G P +
Sbjct: 302 RPYFTIHDSEFKEYTTRTQAP--PSVILGVTNPFFAKTLQHWPHIIRIGDMKLPGDVPKQ 359
Query: 374 VAFASRASSGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYA 433
V + + +P +++SY
Sbjct: 360 VKVKKLKNLKTLDSKP-------------------------------------GVYTSYK 382
Query: 434 ATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSE 493
D I+ +L R E+ S ILRR+FLELT +F+ P Y + P +
Sbjct: 383 PYLDKDEEIVKQLQKGVQQKRPTEAQSA----ILRRYFLELTESFIIPLERYVASLMPLQ 438
Query: 494 GS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFQR 552
SP+ PP L F+ ++F+ +L+ G L+ ++ +W+ LYR FLK PNF WF+
Sbjct: 439 KCISPWKSPPQLRHFSQDDFMKTLEK--AGPQLTSGLKGDWIGLYRHFLKSPNFDGWFRS 496
Query: 553 RRAAAEQEQHRLWRQARMRTDIQQLIAKMSELESVD 588
R+ Q L +A ++ K +E+E+VD
Sbjct: 497 RQKEMTQNLEALHLEALCNENLVFWSQKHTEVETVD 532
>sp|Q9D9V7|DEN6B_MOUSE Protein DENND6B OS=Mus musculus GN=Dennd6b PE=2 SV=3
Length = 585
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 21 RMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHD 79
R W+ C + FDLE GQ +E YP LT E+ + Y +FPDS S + D
Sbjct: 37 RFSAWLECVCVVTFDLELGQALELVYPSDFRLTDKEKSSICYLAFPDSHS-----GCLGD 91
Query: 80 CIFFFRFQRHKNLPQGNVTPSEITEINDKITSSELTEEKLLKRSKSFSSSKGSRYFYGYV 139
F FR ++ + +++D+ +++ + + ++ GYV
Sbjct: 92 TQFSFRMRQCGG-------QRSLWQVDDRSYNNK----------APLALQREPAHYLGYV 134
Query: 140 FNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVSIW 199
+ RQ D +KRG QKSLV++S PF +F+ LL ++ P YF+ +E + + + W
Sbjct: 135 YFRQVKDSSVKRGYFQKSLVLVSRLPFVRLFQSLLSLIAPEYFEKLAPCLEAVCNEIDQW 194
Query: 200 PSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQSIPQGLFHD 259
P+PVPG+ + LPI +++V +P + LES + ++ P S+ H+
Sbjct: 195 PAPVPGQTLNLPIMGVVIQVRIP-SRVDKLESSPPKQCDQENLLPAPVVLTSV-----HE 248
Query: 260 SDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFRPY 319
DLF FR +L + LWEL+L+GEP++V+AP+P E V +L S + PL DFRPY
Sbjct: 249 LDLFRCFRPVLTHVQTLWELMLLGEPLVVLAPSPDVSSELVLALTSCLQPLKFCCDFRPY 308
Query: 320 FTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAPNSNRVAFASR 379
FTIHD +F L + + P +VLGVTN FF+K L+ PH++ +G P
Sbjct: 309 FTIHDSEFKELTTRTQAP--PNVVLGVTNPFFIKTLQHWPHVLRIGEP------------ 354
Query: 380 ASSGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYAATTKPD 439
K+SG L VKL++ L + + K +++SY A D
Sbjct: 355 ----KMSG-----------------DLPKQVKLKKPSRLKTL-DTKPGLYTSYTAHLHRD 392
Query: 440 TSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGS-SPF 498
++L RL+ R + V + +LRRH LELT +F+ P Y + P + + +P+
Sbjct: 393 KALLKRLLKGVQKKRPWD----VQSALLRRHLLELTQSFIIPLEHYMASLMPLQKNITPW 448
Query: 499 VDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFQRRRAAAE 558
PP + PF ++FL SL+ G L+ ++ +WL LYRRF K P+F W+++R
Sbjct: 449 KSPPQICPFRQDDFLRSLEH--AGPQLTCILKGDWLGLYRRFFKSPHFDGWYRQRHKEMA 506
Query: 559 QEQHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQ 599
Q+ L +A +I+ + SE+E VD + L++
Sbjct: 507 QKLEALHLEAICEANIEAWMKDKSEVEVVDLVLKLREKLVR 547
>sp|Q8NEG7|DEN6B_HUMAN Protein DENND6B OS=Homo sapiens GN=DENND6B PE=2 SV=1
Length = 585
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 283/587 (48%), Gaps = 84/587 (14%)
Query: 21 RMQRWVVAFCTIRFDLEQGQLIEDCYPPGC-LTQDEELEVAYSSFPDSVSQHQNRSSIHD 79
R W+ C + FDLE GQ +E YP LT E+ + Y SFPDS S + D
Sbjct: 37 RFSAWLECVCVVTFDLELGQALELVYPNDFRLTDKEKSSICYLSFPDSHS-----GCLGD 91
Query: 80 CIFFFRFQRHKNLPQGNVTPSEITEINDKITSSELTEEKLLKRSKSFSSSKGSRYFYGYV 139
F FR ++ G +P +++ + + +++GYV
Sbjct: 92 TQFSFRMRQCG----GQRSPWH-------------ADDRHYNSRAPVALQREPAHYFGYV 134
Query: 140 FNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQIMGPLYFDVGKKAIEHIASYVSIW 199
+ RQ D +KRG QKSLV++S PF +F+ LL ++ P YFD +E + S + W
Sbjct: 135 YFRQVKDSSVKRGYFQKSLVLVSRLPFVRLFQALLSLIAPEYFDKLAPCLEAVCSEIDQW 194
Query: 200 PSPVPGKLMELPIGNAMLKVNLPPAHSLPLESGMLSEESAASVAPFLPYNQS------IP 253
P+P PG+ + LP+ +++V +P S + +P ++Q +
Sbjct: 195 PAPAPGQTLNLPVMGVVVQVRIP------------SRVDKSESSPPKQFDQENLLPAPVV 242
Query: 254 QGLFHDSDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCS 313
H+ DLF FR +L + LWEL+L+GEP+LV+AP+P E V +L S + PL
Sbjct: 243 LASVHELDLFRCFRPVLTHMQTLWELMLLGEPLLVLAPSPDVSSEMVLALTSCLQPLRFC 302
Query: 314 IDFRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLKALRKIPHIVSVGSPAPNSNR 373
DFRPYFTIHD +F + + P +VLGVTN FF+K L+ PHI+ VG P
Sbjct: 303 CDFRPYFTIHDSEFKEFTTRTQAP--PNVVLGVTNPFFIKTLQHWPHILRVGEP------ 354
Query: 374 VAFASRASSGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCLMTEHKEAIWSSYA 433
K+SG L VKL++ L + + K ++++Y
Sbjct: 355 ----------KMSG-----------------DLPKQVKLKKPSRLKTL-DTKPGLYTAYT 386
Query: 434 ATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSE 493
A D ++L RL+ R + V + +LRRH LELT +F+ P Y + P +
Sbjct: 387 AHLHRDKALLKRLLKGVQKKRPSD----VQSALLRRHLLELTQSFIIPLEHYMASLMPLQ 442
Query: 494 GS-SPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRRFLKGPNFMPWFQR 552
S +P+ PP + PF+ ++FL SL+ G L+ ++ +WL LYRRF K P+F W+++
Sbjct: 443 KSITPWKTPPQIQPFSQDDFLRSLE--HAGPQLTCILKGDWLGLYRRFFKSPHFDGWYRQ 500
Query: 553 RRAAAEQEQHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQ 599
R + L +A +I+ + SE+E VD + L++
Sbjct: 501 RHKEMALKLEALHLEAICEANIETWMKDKSEVEVVDLVLKLREKLVR 547
>sp|Q54VA9|F116_DICDI Protein DENND6 homolog OS=Dictyostelium discoideum GN=DDB_G0280481
PE=3 SV=1
Length = 715
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 194/661 (29%), Positives = 289/661 (43%), Gaps = 145/661 (21%)
Query: 3 RSPSFSVKSELSLKPDPERM------QRWVVAFCTIRFDLEQGQLIEDCYPPGCLTQDEE 56
+ P+ S S+ + DP + ++W+ +FC I FDLE GQ+++ +P ++E
Sbjct: 66 QHPNISTTSDNNSLLDPSNLTLNGKKKKWINSFCIINFDLEIGQVLDYSFPQVNFKEEES 125
Query: 57 LEVAYSSFPDSVSQHQNRSSIHDCIFFFRFQRHKNLPQGNVTPSEITEINDKITSSELTE 116
+ + SFPDS S Q D I+ F+ + +L G
Sbjct: 126 TNLCFLSFPDSNSHLQG-----DIIYSFKLKETSSLGNGQC------------------- 161
Query: 117 EKLLKRSKSFSSSKGSRYFYGYVFNRQRHDERLKRGGEQKSLVILSHGPFSSVFRPLLQI 176
+ YGYVF RQ D + RG QKS+V+LS F +F+ +++I
Sbjct: 162 ----------------NFQYGYVFFRQEKDSSISRGYLQKSVVLLSDESFVGLFKKVMEI 205
Query: 177 MGPLYFDVGKKAIEHIASYVSIWPSPVPGKLMELPIGNAMLKVNLPPAHSLP-------- 228
+GPLYFD G +E + WP G+ ELPI +L ++P P
Sbjct: 206 VGPLYFDHGNTLLEVAYQNIMNWPELKLGQTYELPILGYILTFHVPHTRGTPHIIDPVVK 265
Query: 229 -------------------LESGMLSEESAASVAPFLPYNQSIPQGLFHDSDLFGTFRGL 269
G + + V+P + + L D++G F+
Sbjct: 266 QHQLGGGSGGGLSSSPSSSSGGGNIPTSNTTGVSPSIWSEMKLVSNL-KSIDIYGCFKSF 324
Query: 270 LLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFRPYFTIHDPQF-- 327
+LW+LWEL+L+G P+LVI+P PP C ++V +LVSLI+PL D+RPYFTIHD F
Sbjct: 325 TTKLWMLWELVLLGHPLLVISPNPPMCSDSVLALVSLISPLHYCGDYRPYFTIHDTDFHK 384
Query: 328 ----AHLNSLQ-------------------EGDTFPPMVLGVTNLFFLKALRKIPHIVSV 364
+HL+ + + PP +LGVTN FFLKAL P+I+++
Sbjct: 385 YTSFSHLSGTRPDDSNNNNNQDDSEYNNNNNNNGIPPSILGVTNPFFLKALGNWPNILTI 444
Query: 365 GSPAPNSNRVAFASRASSGKISGRPEGFGLQQLSLKFSPSSLLNVVKLRREGPLCLMTEH 424
G+ R GF K SSL N++ L+T H
Sbjct: 445 GT------------------TQQRLGGF-------KKIKSSLPNIMSKD------LLTRH 473
Query: 425 ----KEAIWSSYAATTKPDTSILNRLIDAGMSPRVEESMSVVNNEILRRHFLELTTNFLA 480
KE I S Y PD S+L ++ E + + NE+LR HFL+LT FL
Sbjct: 474 VLDNKEKILSEYKPFISPDKSVLKKI--------TESADDDIINEVLRTHFLQLTQKFLI 525
Query: 481 PFGPYFRTTTP-SEGSSPFVDPPTLPPFNANEFLSSLQARGVGKFLSKRMRSNWLDLYRR 539
P YF P ++ S F PP L PF E L+ + +F+ +S ++LY++
Sbjct: 526 PLERYFSLLLPLAKTISIFQRPPRLKPFIKEECLNKIMETD-ERFIIDN-KSKEIELYKQ 583
Query: 540 FLKGPNFMPWFQRRRAAAEQEQHRLWRQARMRTDIQQLIAKMSELESVDTFNAVERHLIQ 599
FL NF W +RA A + + L+R+A + DI L+ + D VE LI
Sbjct: 584 FLDCVNFKQWLDDKRAQAIKHLNILYRKAILDADIHTLLRGKPISTATDLLKRVEDQLIL 643
Query: 600 E 600
E
Sbjct: 644 E 644
>sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1
SV=2
Length = 1673
Score = 39.3 bits (90), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 155 QKSLVILSHGPFSSVFRPL------LQIMGPLYFDVGKKAIEHIASYVSIWPSPVPGK-- 206
K + +LSH PF FR L + GP + K HI+ ++ P P P +
Sbjct: 74 NKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEK----HISHFMQNIPFPSPQRPR 129
Query: 207 -LMELPIGNAMLKVNLPPAHSLPLESGMLSE-------ESAASVAPFLPYNQSIPQGLFH 258
L++L + +A++ ++ P + LPL S E+ A++ F+ I
Sbjct: 130 ILVQLSVHDALI-LSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLESKILLHSLR 188
Query: 259 DSDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFRP 318
+ L G ++ ++ P P P C ++A+++S P + +D R
Sbjct: 189 PAVLTGVAEAVVAMIF----------PFQWQCPYIPLCPLSLAAVLSAPLPFIVGVDSR- 237
Query: 319 YFTIHDP 325
YF +HDP
Sbjct: 238 YFDLHDP 244
>sp|D5SRZ4|NNRE_PLAL2 NAD(P)H-hydrate epimerase OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=nnrE PE=3 SV=1
Length = 257
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 307 IAPLLCSIDFRPYFTIHDPQFAHLNSLQEGDTFPPMVLGVTNLFFLK-ALRKIPHIVSVG 365
I P + +D+R T+ +E D F LG+++L ++ A R + S
Sbjct: 3 ICPFVRLLDWR---TLRAADCLTARQSREVDRFAIEELGISSLVLMENAARSVCDWFSQH 59
Query: 366 SPAPNSNRVAFASRASSGKISGRPEGFGLQQL---------------SLKFSPSSLLNVV 410
A +S +F R G+ + +GF + +L + +P + +N
Sbjct: 60 VQASSSEETSFVVRVVCGRGNNGGDGFAIARLLWTMGYAVEIFATHPEAELAPDARVNAA 119
Query: 411 KLRREG-PLCLMTEHKEAIWSSYAATTKPDTSILNRLIDAG----MSPRVEESMSVVNNE 465
R+ G P M E EA AA+ + + I++ ++ G +S + E + +N
Sbjct: 120 LARKLGIPWREMREFGEA-----AASARAEDWIVDAILGTGQSRPLSGVLAELVQGMNAS 174
Query: 466 ILRRHFLELTTNFLAPFGP 484
+ RR ++L T F A GP
Sbjct: 175 LSRRLAVDLPTGFSADAGP 193
>sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2
Length = 1863
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 155 QKSLVILSHGPFSSVFRPLL------QIMGPLYFDVGKKAIEHIASYVSIWPSPVPGK-- 206
K + +LSH PF FR L I GP + K HI+ ++ P P P +
Sbjct: 310 NKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEK----HISHFMHKVPFPSPQRPR 365
Query: 207 -LMEL-PIGNAMLKVNLPPAHSLPLESGMLSE-------ESAASVAPFLPYNQSIPQGLF 257
L++L P N +L + P + LPL G S E+A ++ F I
Sbjct: 366 ILVQLSPHDNLIL--SQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKI----- 418
Query: 258 HDSDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFR 317
L + R +L V L+ + P P P C A+A ++S P + ID R
Sbjct: 419 ----LIHSLRPSVLTS-VTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSR 473
Query: 318 PYFTIHDP 325
YF ++DP
Sbjct: 474 -YFDLYDP 480
>sp|A6H8H2|DEN4C_MOUSE DENN domain-containing protein 4C OS=Mus musculus GN=Dennd4c PE=1
SV=1
Length = 1906
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 32/187 (17%)
Query: 155 QKSLVILSHGPFSSVFRPLL------QIMGPLYFDVGKKAIEHIASYVSIWPSPVPGK-- 206
K + +LSH PF F+ L + GP + K HI+ ++ P P P +
Sbjct: 309 NKCICLLSHWPFFEAFKNFLMFIYKVSVSGPHPLPIEK----HISHFMQNIPFPSPQRPR 364
Query: 207 -LMELPIGNAMLKVNLPPAHSLPLESGMLSE-------ESAASVAPFLPYNQSIPQGLFH 258
L++L + +A + ++ P + LPL S E+ A++ + I
Sbjct: 365 ILIQLSVHDAFI-LSQPVSTPLPLSGANFSSLLMNLGPENCATLLLLVLLESKILLHSLR 423
Query: 259 DSDLFGTFRGLLLQLWVLWELLLIGEPILVIAPTPPQCCEAVASLVSLIAPLLCSIDFRP 318
+ L G ++ ++ P P P C ++A ++S P + +D R
Sbjct: 424 PAVLTGVAEAVVAMIF----------PFQWQCPYIPLCPLSLAGVLSAPLPFIVGVDSR- 472
Query: 319 YFTIHDP 325
YF +HDP
Sbjct: 473 YFDLHDP 479
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,566,463
Number of Sequences: 539616
Number of extensions: 10037172
Number of successful extensions: 23774
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 23720
Number of HSP's gapped (non-prelim): 38
length of query: 621
length of database: 191,569,459
effective HSP length: 124
effective length of query: 497
effective length of database: 124,657,075
effective search space: 61954566275
effective search space used: 61954566275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)