BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007020
(621 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 609 bits (1570), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/341 (86%), Positives = 308/341 (90%)
Query: 259 RRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLA 318
RR+KPQ+ FFDVPAEEDPEVHLGQLKRFSLRELQVA+D+FSNKNILGRGGFGKVYKGRLA
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 319 DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 378
DG+LVAVKRLKEER GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 379 SVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438
SVASCLRERP SQ PLDWP R+RIALGSARGL+YLHDHCDPKIIHRDVKAANILLDEEFE
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
AVVGDFGLAKLMDYKD HV AVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQ
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 499 RAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGS 558
RAFDLARLANDDDVMLLDWV VD DLQ NY + EVEQLIQVALLCTQ S
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 559 PMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPH 599
PM+RPKMSEVVRMLEGDGLAERW+EWQK E+ RQ+ H
Sbjct: 301 PMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTH 341
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 593 bits (1530), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/326 (88%), Positives = 297/326 (91%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVK 326
FFDVPAEEDPEVHLGQLKRFSLRELQVA+D+F NKNILGRGGFGKVYKGRLADG LVAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 327 RLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 386
RLKEERT GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 387 RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446
RP SQ PLDWP R+RIALGSARGL+YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL 506
AKLMDYKD HV AVRG IGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQRAFDLARL
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 507 ANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMS 566
ANDDDVMLLDWV VD DLQ NY + EVEQLIQVALLCTQ SPM+RPKMS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 567 EVVRMLEGDGLAERWDEWQKVEVLRQ 592
EVVRMLEGDGLAERW+EWQK E+ RQ
Sbjct: 301 EVVRMLEGDGLAERWEEWQKEEMFRQ 326
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 164/293 (55%), Gaps = 13/293 (4%)
Query: 285 RFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP---GGELQFQ 341
R L +L+ AT++F +K ++G G FGKVYKG L DG+ VA+KR RTP G +F+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR----RTPESSQGIEEFE 83
Query: 342 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKR 401
TE+E +S H +L+ L GFC E +L+Y YM NG++ L + + W R
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTA 460
I +G+ARGL YLH IIHRDVK+ NILLDE F + DFG++K + TH+
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 461 VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXX 520
V+GT+G+I PEY G+ +EK+DV+ +G++L E++ + A + + + V L +W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAVE 258
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
VDP+L + + + A+ C S DRP M +V+ LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 164/293 (55%), Gaps = 13/293 (4%)
Query: 285 RFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP---GGELQFQ 341
R L +L+ AT++F +K ++G G FGKVYKG L DG+ VA+KR RTP G +F+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR----RTPESSQGIEEFE 83
Query: 342 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKR 401
TE+E +S H +L+ L GFC E +L+Y YM NG++ L + + W R
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTA 460
I +G+ARGL YLH IIHRDVK+ NILLDE F + DFG++K + TH+
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 461 VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXX 520
V+GT+G+I PEY G+ +EK+DV+ +G++L E++ + A + + + V L +W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAVE 258
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
VDP+L + + + A+ C S DRP M +V+ LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 166/310 (53%), Gaps = 26/310 (8%)
Query: 277 EVHLGQLKRFSLRELQVATDSFSNK------NILGRGGFGKVYKGRLADGSLVAVKRLK- 329
EV + FS EL+ T++F + N +G GGFG VYKG + + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 330 --EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA---SCL 384
+ T + QF E+++++ H NL+ L GF + LVY YM NGS+ SCL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 385 RERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 444
PP L W R +IA G+A G+++LH++ IHRD+K+ANILLDE F A + DF
Sbjct: 125 DGTPP----LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 177
Query: 445 GLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDL 503
GLA+ + + T + + + GT ++APE L G+ + K+D++ +G++LLE+ITG A D
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 504 ARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP 563
R + ++L +D + N+ VE + VA C RP
Sbjct: 237 HR---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 564 KMSEVVRMLE 573
+ +V ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 165/310 (53%), Gaps = 26/310 (8%)
Query: 277 EVHLGQLKRFSLRELQVATDSFSNK------NILGRGGFGKVYKGRLADGSLVAVKRLK- 329
EV + FS EL+ T++F + N +G GGFG VYKG + + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 330 --EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA---SCL 384
+ T + QF E+++++ H NL+ L GF + LVY YM NGS+ SCL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 385 RERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 444
PP L W R +IA G+A G+++LH++ IHRD+K+ANILLDE F A + DF
Sbjct: 125 DGTPP----LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 177
Query: 445 GLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDL 503
GLA+ + + T + + GT ++APE L G+ + K+D++ +G++LLE+ITG A D
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 504 ARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP 563
R + ++L +D + N+ VE + VA C RP
Sbjct: 237 HR---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 564 KMSEVVRMLE 573
+ +V ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 162/305 (53%), Gaps = 26/305 (8%)
Query: 282 QLKRFSLRELQVATDSFSNK------NILGRGGFGKVYKGRLADGSLVAVKRLK---EER 332
+ FS EL+ T++F + N +G GGFG VYKG + + + VAVK+L +
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 63
Query: 333 TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA---SCLRERPP 389
T + QF E+++++ H NL+ L GF + LVY YM NGS+ SCL PP
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 390 SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449
L W R +IA G+A G+++LH++ IHRD+K+ANILLDE F A + DFGLA+
Sbjct: 124 ----LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 450 MD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLAN 508
+ + + + GT ++APE L G+ + K+D++ +G++LLE+ITG A D R
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--- 232
Query: 509 DDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEV 568
+ ++L +D + N+ VE + VA C RP + +V
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 569 VRMLE 573
++L+
Sbjct: 292 QQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 156/305 (51%), Gaps = 26/305 (8%)
Query: 282 QLKRFSLRELQVATDSFSNK------NILGRGGFGKVYKGRLADGSLVAVKRLK---EER 332
+ FS EL+ T++F + N G GGFG VYKG + + + VAVK+L +
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 60
Query: 333 TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA---SCLRERPP 389
T + QF E+++ + H NL+ L GF + LVY Y NGS+ SCL PP
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 390 SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449
L W R +IA G+A G+++LH++ IHRD+K+ANILLDE F A + DFGLA+
Sbjct: 121 ----LSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 173
Query: 450 MD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLAN 508
+ + + + GT + APE L G+ + K+D++ +G++LLE+ITG A D R
Sbjct: 174 SEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--- 229
Query: 509 DDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEV 568
+ ++L +D N+ VE VA C RP + +V
Sbjct: 230 EPQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
Query: 569 VRMLE 573
++L+
Sbjct: 289 QQLLQ 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 149
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 168
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 149
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 26/225 (11%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLK---EERTPGGELQFQTEVEMI 347
L++ + + I+G GGFGKVY+ G VAVK + +E + E ++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 348 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPPSQLPLDWPTRKRIALGS 406
+M H N++ LRG C+ LV + G + L +R P + ++W A+
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQI 114
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFE--------AVVGDFGLAKLMDYKDTHVT 458
ARG++YLHD IIHRD+K++NIL+ ++ E + DFGLA ++ H T
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRT 169
Query: 459 T--AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T + G +APE + S+ +DV+ YG++L EL+TG+ F
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 167
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 148
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 147
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 146
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 144
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 141
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 5/202 (2%)
Query: 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMISMAVHRNLLRLR 359
K +G G FG V++ GS VAVK L E+ + +F EV ++ H N++
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G P +V Y++ GS+ L + ++ LD R +A A+G++YLH+ +P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
I+HRD+K+ N+L+D+++ V DFGL++L A GT +APE L S+
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA-GTPEWMAPEVLRDEPSN 217
Query: 480 EKTDVFGYGIMLLELITGQRAF 501
EK+DV+ +G++L EL T Q+ +
Sbjct: 218 EKSDVYSFGVILWELATLQQPW 239
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 147
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 150
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 154
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 150
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 149
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 148
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD---THVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M K+ H T + + +A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 149
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 5/202 (2%)
Query: 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMISMAVHRNLLRLR 359
K +G G FG V++ GS VAVK L E+ + +F EV ++ H N++
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G P +V Y++ GS+ L + ++ LD R +A A+G++YLH+ +P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
I+HR++K+ N+L+D+++ V DFGL++L +A GT +APE L S+
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRDEPSN 217
Query: 480 EKTDVFGYGIMLLELITGQRAF 501
EK+DV+ +G++L EL T Q+ +
Sbjct: 218 EKSDVYSFGVILWELATLQQPW 239
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 39/294 (13%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRL----KEERTPGGE--LQFQTEVE 345
+A + + +G+GGFG V+KGRL D S+VA+K L E T E +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++S H N+++L G P +V ++ G + L ++ P+ W + R+ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLD 130
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHVTTA 460
A G+ Y+ + +P I+HRD+++ NI L E A V DFGL++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 461 VRGTIGHIAPEYLSTGKSS--EKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
+ G +APE + + S EK D + + ++L ++TG+ FD + ++ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMI 242
Query: 519 XXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
P L+N V LC G P RP S +V+ L
Sbjct: 243 REEGLRPTIPEDCPPRLRN------------VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 303 ILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 359 RGFCM-TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLH 414
G C+ + L+V PYM +G + + +R + PT K + L A+G+ +L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 208
Query: 415 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPE 471
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT 496
L T K + K+DV+ +G++L EL+T
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRL----KEERTPGGE--LQFQTEVE 345
+A + + +G+GGFG V+KGRL D S+VA+K L E T E +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++S H N+++L G P +V ++ G + L ++ P+ W + R+ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLD 130
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHVTTA 460
A G+ Y+ + +P I+HRD+++ NI L E A V DFG ++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 461 VRGTIGHIAPEYLSTGKSS--EKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
+ G +APE + + S EK D + + ++L ++TG+ FD + ++ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMI 242
Query: 519 XXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
P L+N V LC G P RP S +V+ L
Sbjct: 243 REEGLRPTIPEDCPPRLRN------------VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRL----KEERTPGGE--LQFQTEVE 345
+A + + +G+GGFG V+KGRL D S+VA+K L E T E +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++S H N+++L G P +V ++ G + L ++ P+ W + R+ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLD 130
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHVTTA 460
A G+ Y+ + +P I+HRD+++ NI L E A V DF L++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 461 VRGTIGHIAPEYLSTGKSS--EKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
+ G +APE + + S EK D + + ++L ++TG+ FD + ++ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMI 242
Query: 519 XXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
P L+N V LC G P RP S +V+ L
Sbjct: 243 REEGLRPTIPEDCPPRLRN------------VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 65
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 66 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 122
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 123 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 179
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 180 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 229
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 230 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 71
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 72 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 128
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 129 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 185
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 186 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 235
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 236 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 120
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 121 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 227
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 228 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 72
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 73 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 129
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 130 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 186
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 187 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 236
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 237 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 120
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 121 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 227
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 228 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 69
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 126
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 127 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 183
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 233
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 234 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 64
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 65 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 121
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 122 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 178
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 228
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 229 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 120
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 121 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 177
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 227
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 228 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 68
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 69 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 126 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 183 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 232
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 233 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 69
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 126
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 127 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 183
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 233
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 234 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 73
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 74 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAE 130
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 131 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 187
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 188 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 237
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 238 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 14/211 (6%)
Query: 299 SNKNILGRGGFGKVYKGRLADGS-----LVAVKRLKEERTPGGELQFQTEVEMISMAVHR 353
+ + ++G G FG+VYKG L S VA+K LK T + F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N++RL G +++ YM NG++ LRE+ L R G A G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL 163
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPE 471
+ +HRD+ A NIL++ V DFGL++++ D + T+ T+ + I APE
Sbjct: 164 ---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
+S K + +DV+ +GI++ E++T G+R +
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 58
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 59 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 115
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 116 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 172
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 222
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 223 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S S+ + IA +ARG+ YLH II
Sbjct: 78 TKP--QLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE + S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
S ++DV+ +GI+L EL+TGQ + + + N D ++
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMIS 348
E +V ++ LG G FG+V+ G + VAVK LK+ +P F E ++
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMK 59
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H+ L+RL +T ++ YM NGS+ L+ PS + L +A A
Sbjct: 60 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAE 116
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++++ + IHR+++AANIL+ + + DFGLA+L++ + + I
Sbjct: 117 GMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXX 528
APE ++ G + K+DV+ +GI+L E++T R + N + + L+
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGY 223
Query: 529 XXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V PD E+L Q+ LC + P DRP + +LE
Sbjct: 224 RMVRPD-------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
F D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGLA+++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
F D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
F D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 FVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S S+ + IA +ARG+ YLH II
Sbjct: 90 TAP--QLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 423 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
S ++DV+ +GI+L EL+TGQ + + + N D ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 235
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 16/215 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S S+ + IA +ARG+ YLH II
Sbjct: 90 TKP--QLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 423 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
S ++DV+ +GI+L EL+TGQ + + + N D ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 235
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
F D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 41/296 (13%)
Query: 281 GQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQF 340
G L +E++V + ++GRG FG V K + VA+K+++ E F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESE---RKAF 49
Query: 341 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRK 400
E+ +S H N+++L G C+ P LV Y GS+ + L PL + T
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLH----GAEPLPYYTAA 103
Query: 401 RI---ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTH 456
L ++G++YLH +IHRD+K N+LL + + DFG A + TH
Sbjct: 104 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---TH 160
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLD 516
+T +G+ +APE SEK DVF +GI+L E+IT ++ FD +
Sbjct: 161 MTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD----EIGGPAFRIM 215
Query: 517 WVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
W P L N + +E L+ C P RP M E+V+++
Sbjct: 216 WA--------VHNGTRPPLIKN-LPKPIESLMT---RCWSKDPSQRPSMEEIVKIM 259
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
LG G G+V+ G + VAVK LK+ +P F E ++ H+ L+RL
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA-V 76
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+T ++ YM NGS+ L+ PS + L +A A G++++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 483 DVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEA 542
DV+ +GI+L E++T R + N + + L+ V PD
Sbjct: 192 DVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLE---------RGYRMVRPD-------N 234
Query: 543 EVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E+L Q+ LC + P DRP + +LE
Sbjct: 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 139/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
F D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL +++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVE 345
SL + ++ + K+ LG G FG+VY+G SL VAVK LKE+ E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++ H NL++L G C ++ +M G++ LRE ++ + L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLY 113
Query: 406 SARGLSYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
A +S ++ + K IHRD+ A N L+ E V DFGL++LM +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXX 524
I APE L+ K S K+DV+ +G++L E+ T + ++ D + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGIDPSQVYE-------- 221
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
++ D + E E++ ++ C Q +P DRP +E+ + E
Sbjct: 222 -----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
+ D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 20 YVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 73
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 134 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 187
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 248 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 289
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 290 NNRPKFEQIVSILD 303
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVE 345
SL + ++ + K+ LG G +G+VY+G SL VAVK LKE+ E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++ H NL++L G C ++ +M G++ LRE ++ + L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS------AVVLLY 113
Query: 406 SARGLSYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
A +S ++ + K IHRD+ A N L+ E V DFGL++LM +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXX 524
I APE L+ K S K+DV+ +G++L E+ T + ++ D + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGIDPSQVYE-------- 221
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
++ D + E E++ ++ C Q +P DRP +E+ + E
Sbjct: 222 -----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
+ D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 YVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 31/284 (10%)
Query: 297 SFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVH 352
+ S ++G G FG+V GRL S VA+K LK T F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL G ++V YM NGS+ S LR+ + R G A G+ Y
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 133
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAP 470
L D +HRD+ A NIL++ V DFGL++++ D + + T + I +P
Sbjct: 134 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 529
E ++ K + +DV+ YGI+L E+++ G+R + ++N D + +D
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------EGY 238
Query: 530 XVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
+ P + L Q+ L C Q +RPK ++V +L+
Sbjct: 239 RLPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
+ D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 YVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V YM NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 31/284 (10%)
Query: 297 SFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVH 352
+ S ++G G FG+V GRL S VA+K LK T F E ++ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL G ++V YM NGS+ S LR+ + R G A G+ Y
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 150
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAP 470
L D +HRD+ A NIL++ V DFGL++++ D + + T + I +P
Sbjct: 151 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 529
E ++ K + +DV+ YGI+L E+++ G+R + ++N D + +D
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------EGY 255
Query: 530 XVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
+ P + L Q+ L C Q +RPK ++V +L+
Sbjct: 256 RLPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+GRG FG+V+ GRL AD +LVAVK +E P + +F E ++ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+V + G + LR L T ++ +A G+ YL C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGK 477
HRD+ A N L+ E+ + DFG+++ ++ A G + + APE L+ G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 478 SSEKTDVFGYGIMLLELIT 496
S ++DV+ +GI+L E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 34/276 (12%)
Query: 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRG 360
+ ++GRG FG V K + VA+K+++ E F E+ +S H N+++L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYG 68
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI---ALGSARGLSYLHDHC 417
C+ P LV Y GS+ + L PL + T L ++G++YLH
Sbjct: 69 ACLNPV--CLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 418 DPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
+IHRD+K N+LL + + DFG A + TH+T +G+ +APE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGS 178
Query: 477 KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
SEK DVF +GI+L E+IT ++ FD + W P L
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFD----EIGGPAFRIMWA--------VHNGTRPPLI 226
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
N + +E L+ C P RP M E+V+++
Sbjct: 227 KN-LPKPIESLMT---RCWSKDPSQRPSMEEIVKIM 258
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 74 TAP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 302 NILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+LG G FG VYKG + +G V A+K L E P ++F E +++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYL 413
RL G C++PT + LV M +G + + E SQL L+W + A+G+ YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEY 472
+ +++HRD+ A N+L+ + DFGLA+L++ + + I +A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 473 LSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+ K + ++DV+ YG+ + EL+T G + +D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+GRG FG+V+ GRL AD +LVAVK +E P + +F E ++ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+V + G + LR L T ++ +A G+ YL C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGK 477
HRD+ A N L+ E+ + DFG+++ ++ A G + + APE L+ G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 478 SSEKTDVFGYGIMLLELIT 496
S ++DV+ +GI+L E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 79 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 226
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 74 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 134
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 235
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 134
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 235
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 79 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 226
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 76 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 223
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVE 345
SL + ++ + K+ LG G +G+VY+G SL VAVK LKE+ E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++ H NL++L G C ++ +M G++ LRE ++ + L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLY 113
Query: 406 SARGLSYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
A +S ++ + K IHRD+ A N L+ E V DFGL++LM +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXX 524
I APE L+ K S K+DV+ +G++L E+ T + ++ D + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGIDPSQVYE-------- 221
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
++ D + E E++ ++ C Q +P DRP +E+ + E
Sbjct: 222 -----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 79
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 133
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 234
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 134
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
K IHRD+ A N L+ E V DFGL++LM + I APE L+ K
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 479 SEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQN 537
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYRM 236
Query: 538 NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 129
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 230
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 302 NILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+LG G FG VYKG + +G V A+K L E P ++F E +++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYL 413
RL G C++PT + LV M +G + + E SQL L+W + A+G+ YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEY 472
+ +++HRD+ A N+L+ + DFGLA+L++ + + I +A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 473 LSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+ K + ++DV+ YG+ + EL+T G + +D
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 129
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 230
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEK 129
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 230
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 76
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 130
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
K IHRD+ A N L+ E V DFGL++LM + I APE L+ K
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 479 SEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQN 537
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYRM 232
Query: 538 NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 77
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 131
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 232
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEK 129
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 230
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 77
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 131
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 232
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 101 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 248
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 76
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 130
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 231
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 134
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 235
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEK 129
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 230
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 102 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 249
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 77
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 131
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 232
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 88
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 142
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 243
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 244 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
F D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 80
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEK 134
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 235
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 31/277 (11%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 75
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEK 129
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 478 SSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQ 536
S K+DV+ +G++L E+ T G + L+ +++ + D +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 230
Query: 537 NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 74 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 423 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 221
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 37/314 (11%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL---- 322
+ D EDP + + + ++ + S ++G G FG+V GRL S
Sbjct: 22 YVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++RL G ++V M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 136 FLRKHDAQFTVIQLVGMLR---GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVS 189
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + T + I +PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 500 AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSP 559
+ ++N D + +D + P + L Q+ L C Q
Sbjct: 250 PY--WEMSNQDVIKAVD----------EGYRLPPPMDCP------AALYQLMLDCWQKDR 291
Query: 560 MDRPKMSEVVRMLE 573
+RPK ++V +L+
Sbjct: 292 NNRPKFEQIVSILD 305
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 282
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------SAVVLLYMATQISSAMEYLEK 336
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHR++ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQN 537
S K+DV+ +G++L E+ T + ++ D + + ++ D +
Sbjct: 396 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDLSQVYE-------------LLEKDYRM 438
Query: 538 NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 21/246 (8%)
Query: 265 EFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLA----DG 320
+ F D EDP + + + ++ + ++G G FG+V G L
Sbjct: 8 KIFIDPFTFEDPNEAVREFAK------EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE 61
Query: 321 SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 380
VA+K LK T F +E ++ H N++ L G T +++ +M NGS+
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 381 ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV 440
S LR+ + R G A G+ YL D +HRD+ A NIL++
Sbjct: 122 DSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCK 175
Query: 441 VGDFGLAKLM--DYKDTHVTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
V DFGL++ + D D T+A+ G I APE + K + +DV+ YGI++ E+++
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
Query: 497 -GQRAF 501
G+R +
Sbjct: 236 YGERPY 241
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 94 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 423 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 241
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG G FG+V+ G + + VAVK LK PG F E ++ H L+RL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
++ YMA GS+ L+ ++ L P + A G++Y+
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NY 131
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 481
IHRD++AAN+L+ E + DFGLA++++ + + I APE ++ G + K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 482 TDVFGYGIMLLELIT 496
+DV+ +GI+L E++T
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 279
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 333
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHR++ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQN 537
S K+DV+ +G++L E+ T + ++ D + + ++ D +
Sbjct: 393 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDLSQVYE-------------LLEKDYRM 435
Query: 538 NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 436 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 31/284 (10%)
Query: 297 SFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVH 352
+ S ++G G FG+V GRL S VA+K LK T F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL G ++V M NGS+ S LR+ + R G A G+ Y
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 133
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAP 470
L D +HRD+ A NIL++ V DFGL++++ D + + T + I +P
Sbjct: 134 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 529
E ++ K + +DV+ YGI+L E+++ G+R + ++N D + +D
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------EGY 238
Query: 530 XVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
+ P + L Q+ L C Q +RPK ++V +L+
Sbjct: 239 RLPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
P +L + GS S + + IA +A+G+ YLH II
Sbjct: 102 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 423 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ +GI+L EL+TGQ + + + N D ++ +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 249
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 301 KNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K+ LG G +G+VY+G SL VAVK LKE+ E F E ++ H NL++L
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 321
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G C ++ +M G++ LRE ++ + L A +S ++ +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV------NAVVLLYMATQISSAMEYLEK 375
Query: 420 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 477
K IHR++ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQN 537
S K+DV+ +G++L E+ T + ++ D + + ++ D +
Sbjct: 435 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDLSQVYE-------------LLEKDYRM 477
Query: 538 NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
E E++ ++ C Q +P DRP +E+ + E
Sbjct: 478 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISM 349
++ +S + LG G FG+V+ + VAVK +K PG F E ++
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKT 66
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
H L++L +T ++ +MA GS+ L+ S+ PL P + A G
Sbjct: 67 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEG 123
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
++++ IHRD++AANIL+ + DFGLA++++ + + I A
Sbjct: 124 MAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA 180
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
PE ++ G + K+DV+ +GI+L+E++T R
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 33/296 (11%)
Query: 287 SLRELQVATDSFSNK--NILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQF 340
++RE D+ K ++G G FG+V GRL VA+K LK T F
Sbjct: 18 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF 77
Query: 341 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRK 400
+E ++ H N++ L G +++ YM NGS+ + LR+ +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 401 RIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVT 458
R G G+ YL D +HRD+ A NIL++ V DFG+++++ D + + T
Sbjct: 138 R---GIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 459 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDW 517
+ I APE ++ K + +DV+ YGI++ E+++ G+R + ++N D + ++
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIE- 248
Query: 518 VXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
+ P + L Q+ L C Q DRPK ++V ML+
Sbjct: 249 ---------EGYRLPPPMDCPIA------LHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 33/296 (11%)
Query: 287 SLRELQVATDSFSNK--NILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQF 340
++RE D+ K ++G G FG+V GRL VA+K LK T F
Sbjct: 3 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF 62
Query: 341 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRK 400
+E ++ H N++ L G +++ YM NGS+ + LR+ +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 401 RIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVT 458
R G G+ YL D +HRD+ A NIL++ V DFG+++++ D + + T
Sbjct: 123 R---GIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 459 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDW 517
+ I APE ++ K + +DV+ YGI++ E+++ G+R + ++N D + ++
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIE- 233
Query: 518 VXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
+ P + L Q+ L C Q DRPK ++V ML+
Sbjct: 234 ---------EGYRLPPPMDCPIA------LHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 285 RFSLRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTE 343
++SL++ Q+ LG G FG+V+ R +G A+K LK+E + T
Sbjct: 2 KYSLQDFQIL-------RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN 54
Query: 344 VE--MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR--ERPPSQLPLDWPTR 399
E M+S+ H ++R+ G + ++ Y+ G + S LR +R P+ P
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN------PVA 108
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 459
K A L YLH II+RD+K NILLD+ + DFG AK + VT
Sbjct: 109 KFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTY 161
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ GT +IAPE +ST ++ D + +GI++ E++ G F
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 302 NILGRGGFGKVYKGR-LADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+LG G FG VYKG + DG VA+K L+E +P + E +++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYL 413
RL G C+T T +L V M G + +RE R SQ L+W + A+G+SYL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYL 135
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEY 472
D +++HRD+ A N+L+ + DFGLA+L+D +T + + I +A E
Sbjct: 136 ED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 473 LSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+ + + ++DV+ YG+ + EL+T G + +D
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 186
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 186
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 189
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 301 KNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+ ++G G FG+V GRL VA+K LK T F +E ++ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
L G +++ YM NGS+ + LR+ + R G G+ YL D
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 129
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+HRD+ A NIL++ V DFG+++++ D + + T + I APE ++
Sbjct: 130 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 475 TGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDP 533
K + +DV+ YGI++ E+++ G+R + ++N D + ++ + P
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIE----------EGYRLPP 234
Query: 534 DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
+ L Q+ L C Q DRPK ++V ML+
Sbjct: 235 PMDCPIA------LHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISM 349
++ +S + LG G FG+V+ + VAVK +K PG F E ++
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKT 239
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
H L++L +T ++ +MA GS+ L+ S+ PL P + A G
Sbjct: 240 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEG 296
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
++++ IHRD++AANIL+ + DFGLA++++ + + I A
Sbjct: 297 MAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA 353
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
PE ++ G + K+DV+ +GI+L+E++T R
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 87 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 195
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 179
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 301 KNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+ ++G G FG+V G L VA+K LK T F +E ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
L G T +++ +M NGS+ S LR+ + R G A G+ YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL--- 125
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGT--IGHIAPEY 472
D +HR + A NIL++ V DFGL++ + D D T+A+ G I APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 473 LSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
+ K + +DV+ YGI++ E+++ G+R +
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPY 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 83 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 191
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 210
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 59
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 60 LRHEKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIAS 115
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 116 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 172
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 304 LGRGGFGKVYKGRLADG-------SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+G G FG+V++ R A G ++VAVK LKEE + + FQ E +++ + N++
Sbjct: 55 IGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--------------------PLDW 396
+L G C L++ YMA G + LR P + PL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYK 453
+ IA A G++YL + K +HRD+ N L+ E + DFGL++ + DY
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
A+ I + PE + + + ++DV+ YG++L E+ +
Sbjct: 231 KADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G FG VYKG+ VAVK LK + TP F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY- 100
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
MT +V + S+ L + + IA +A+G+ YLH II
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHA---KNII 154
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 478
HRD+K+ NI L E +GDFGLA + + + G++ +APE + +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
S ++DV+ YGI+L EL+TG+ + + + N D ++ +
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPY--SHINNRDQIIFM 249
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG G FG+V+ G + + VAVK LK PG F E ++ H L+RL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
++ +MA GS+ L+ ++ L P + A G++Y+
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NY 130
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 481
IHRD++AAN+L+ E + DFGLA++++ + + I APE ++ G + K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 482 TDVFGYGIMLLELIT 496
++V+ +GI+L E++T
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 62
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 63 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIAS 118
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 119 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 175
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 301 KNILGRGGFGKVYKGRL-ADG---SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+ ++G G FG+V +GRL A G S VA+K LK T +F +E ++ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
RL G +++ +M NG++ S LR + R G A G+ YL +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 135
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHVTTAVRGT--IGHIAPEY 472
+HRD+ A NIL++ V DFGL++ ++ D T+++ G I APE
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 473 LSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
++ K + +D + YGI++ E+++ G+R +
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 39/295 (13%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVE 345
S+ + ++ + K+ LG G +G+VY G SL VAVK LKE+ E F E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 80
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
++ H NL++L G C +V YM G++ LRE ++ + L
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEV------TAVVLLY 134
Query: 406 SARGLSYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRG 463
A +S ++ + K IHRD+ A N L+ E V DFGL++LM DT+ A +
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKF 193
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXX 522
I APE L+ S K+DV+ +G++L E+ T G + L+ D+
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDL---------- 243
Query: 523 XXXXXXXXVDPDLQNNYVEAEVE----QLIQVALLCTQGSPMDRPKMSEVVRMLE 573
L+ Y + E ++ ++ C + SP DRP +E + E
Sbjct: 244 ------------LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A G
Sbjct: 74 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 182
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG+G FG+V+ G + VA+K LK PG F E +++ H L++L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 245
Query: 362 CMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E + +V YM+ GS+ L+ L L P +A A G++Y+
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---N 300
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD++AANIL+ E V DFGLA+L++ + + I APE G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 481 KTDVFGYGIMLLELITGQR 499
K+DV+ +GI+L EL T R
Sbjct: 361 KSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG+G FG+V+ G + VA+K LK PG F E +++ H L++L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 245
Query: 362 CMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E + +V YM+ GS+ L+ L L P +A A G++Y+
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---N 300
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD++AANIL+ E V DFGLA+L++ + + I APE G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 481 KTDVFGYGIMLLELITGQR 499
K+DV+ +GI+L EL T R
Sbjct: 361 KSDVWSFGILLTELTTKGR 379
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK++ T +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWPTRKRIALG 405
++ L G C ++ Y + G++ LR R P +++P + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 406 S---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAV 461
+ ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 58
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 59 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 114
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 115 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 171
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 60
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 61 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 116
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 117 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 280 LGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ 339
L ++K + +V T S ++G+G FG VY G D + ++ + + E+Q
Sbjct: 8 LAEVKDVLIPHERVVTHS---DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ 64
Query: 340 ----FQTEVEMISMAVHRNLLRLRGFCMTPTERL--LVYPYMANGSVASCLRERPPSQLP 393
F E ++ H N+L L G M P E L ++ PYM +G + +R P
Sbjct: 65 QVEAFLREGLLMRGLNHPNVLALIGI-MLPPEGLPHVLLPYMCHGDLLQFIRS------P 117
Query: 394 LDWPTRKRI---ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
PT K + L ARG+ YL + K +HRD+ A N +LDE F V DFGLA+ +
Sbjct: 118 QRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 451 ---DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+Y R + A E L T + + K+DV+ +G++L EL+T
Sbjct: 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 104/210 (49%), Gaps = 32/210 (15%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL-R 357
LG+G FG V R L D G+LVAVK+L+ P + FQ E++++ A+H + + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILK-ALHSDFIVK 72
Query: 358 LRGFCMTP--TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
RG P E LV Y+ +G CLR D+ R R L ++R L Y
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSG----CLR---------DFLQRHRARLDASRLLLYSSQ 119
Query: 416 HC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHVTTAVRGTIG 466
C + +HRD+ A NIL++ E + DFGLAKL +D V + I
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
APE LS S ++DV+ +G++L EL T
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 70 IRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 189
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 -THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG+G FG+V+ G + VA+K LK PG F E +++ H L++L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 245
Query: 362 CMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E + +V YM+ GS+ L+ L L P +A A G++Y+
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---N 300
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD++AANIL+ E V DFGLA+L++ + + I APE G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 481 KTDVFGYGIMLLELITGQR 499
K+DV+ +GI+L EL T R
Sbjct: 361 KSDVWSFGILLTELTTKGR 379
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 131/288 (45%), Gaps = 47/288 (16%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL-R 357
LG+G FG V R L D G+LVAVK+L+ P + FQ E++++ A+H + + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILK-ALHSDFIVK 75
Query: 358 LRGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
RG P + LV Y+ +G CLR D+ R R L ++R L Y
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSG----CLR---------DFLQRHRARLDASRLLLYSSQ 122
Query: 416 HC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV-RGTIG 466
C + +HRD+ A NIL++ E + DFGLAKL+ KD +V + I
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT------GQRAFDLARLANDDDVMLLDWVXX 520
APE LS S ++DV+ +G++L EL T A L + ++ DV L +
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLE 242
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEV 568
AEV +L++ LC SP DRP S +
Sbjct: 243 LLEEGQRLPAPPA------CPAEVHELMK---LCWAPSPQDRPSFSAL 281
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 133
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 129
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 301 KNILGRGGFGKVYKGRL-ADG---SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
+ ++G G FG+V +GRL A G S VA+K LK T +F +E ++ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
RL G +++ +M NG++ S LR + R G A G+ YL +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 137
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHVTTAVRGT--IGHIAPEY 472
+HRD+ A NIL++ V DFGL++ ++ D T+++ G I APE
Sbjct: 138 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 473 LSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
++ K + +D + YGI++ E+++ G+R +
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 -THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 134
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +L G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 135
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 43/310 (13%)
Query: 274 EDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLK 329
EDP + + + ++ + + ++G G FG+V GRL VA+K LK
Sbjct: 6 EDPNQAVHEFAK------EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK 59
Query: 330 EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP 389
T F E ++ H N++ L G ++V YM NGS+ + L++
Sbjct: 60 VGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG 119
Query: 390 SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449
+ R G + G+ YL D +HRD+ A NIL++ V DFGL+++
Sbjct: 120 QFTVIQLVGMLR---GISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 450 M--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARL 506
+ D + + T + I APE ++ K + +DV+ YGI++ E+++ G+R + +
Sbjct: 174 LEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY--WEM 231
Query: 507 ANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVE---QLIQVALLCTQGSPMDRP 563
N D + ++ + + + ++ L Q+ L C Q RP
Sbjct: 232 TNQDVIKAVE-------------------EGYRLPSPMDCPAALYQLMLDCWQKERNSRP 272
Query: 564 KMSEVVRMLE 573
K E+V ML+
Sbjct: 273 KFDEIVNMLD 282
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 136
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 128
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 14/234 (5%)
Query: 273 EEDPEVHLG-QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKE 330
E +PE L + K ++ Q A + F LG+G FG VY R + A+K L +
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 331 ER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 388
+ G E Q + EVE+ S H N+LRL G+ T L+ Y G+V L++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 389 PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
D A LSY H ++IHRD+K N+LL E + DFG +
Sbjct: 130 ----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 182
Query: 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ + T + GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 183 ---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 130
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +L G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 130
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 161
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG+G FG+V+ G + VA+K LK PG F E +++ H L++L +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 328
Query: 362 CMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E + +V YM+ GS+ L+ L L P +A A G++Y+
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---N 383
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD++AANIL+ E V DFGLA+L++ + + I APE G+ +
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 481 KTDVFGYGIMLLELITGQR 499
K+DV+ +GI+L EL T R
Sbjct: 444 KSDVWSFGILLTELTTKGR 462
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+ L+E +P + E +++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 111 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 219
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 148
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 137
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 32/210 (15%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL-R 357
LG+G FG V R L D G+LVAVK+L+ P + FQ E++++ A+H + + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILK-ALHSDFIVK 76
Query: 358 LRGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
RG P + LV Y+ +G CLR D+ R R L ++R L Y
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSG----CLR---------DFLQRHRARLDASRLLLYSSQ 123
Query: 416 HC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV-RGTIG 466
C + +HRD+ A NIL++ E + DFGLAKL+ KD +V + I
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
APE LS S ++DV+ +G++L EL T
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK++ T +E+EM+ M H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWPTRKRIALG 405
++ L G C ++ Y + G++ LR R P +++P + T K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 406 S---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
+ ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + TT
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 32/210 (15%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL-R 357
LG+G FG V R L D G+LVAVK+L+ P + FQ E++++ A+H + + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILK-ALHSDFIVK 88
Query: 358 LRGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
RG P + LV Y+ +G CLR D+ R R L ++R L Y
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSG----CLR---------DFLQRHRARLDASRLLLYSSQ 135
Query: 416 HC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV-RGTIG 466
C + +HRD+ A NIL++ E + DFGLAKL+ KD +V + I
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 195
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
APE LS S ++DV+ +G++L EL T
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L++ M G + +RE SQ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 273 EEDPEVHLG-QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKE 330
E +PE L + K ++ Q A + F LG+G FG VY R + A+K L +
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 331 ER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 388
+ G E Q + EVE+ S H N+LRL G+ T L+ Y G+V L++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 389 PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
D A LSY H ++IHRD+K N+LL E + DFG +
Sbjct: 130 ----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS- 181
Query: 449 LMDYKDTHVTTAVR----GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
H ++ R GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 182 ------VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 148
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +L G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 296 DSFSNKNILGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
D + LG G FG+V K + + VAVK LK++ T +E+EM+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 348 SM-AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---------SQLPLDWP 397
M H+N++ L G C ++ Y + G++ LR R P +++P +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 398 TRKRIALGS---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
T K + + ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 455 TH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 14/234 (5%)
Query: 273 EEDPEVHLG-QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKE 330
E +PE L + K ++ Q A + F LG+G FG VY R + A+K L +
Sbjct: 1 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 60
Query: 331 ER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 388
+ G E Q + EVE+ S H N+LRL G+ T L+ Y G+V L++
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 120
Query: 389 PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
D A LSY H ++IHRD+K N+LL E + DFG +
Sbjct: 121 K----FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV 173
Query: 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ + T + GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 174 ---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 25/269 (9%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G G FG V+ G + VA+K +KE E F E E++ H L++L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM--SEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
LV+ +M +G ++ LR + + T + L G++YL + C +IH
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 483
RD+ A N L+ E V DFG+ + + +T + + +PE S + S K+D
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 484 VFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAE 543
V+ +G+++ E+ + + +N + V P L + +V
Sbjct: 207 VWSFGVLMWEVFS-EGKIPYENRSNSEVV---------EDISTGFRLYKPRLASTHV--- 253
Query: 544 VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
Q+ C + P DRP S ++R L
Sbjct: 254 ----YQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 25/269 (9%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
LV+ +M +G ++ LR + + T + L G++YL + C +IH
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 483
RD+ A N L+ E V DFG+ + + +T + + +PE S + S K+D
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 484 VFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAE 543
V+ +G+++ E+ + + +N + V P L + +V
Sbjct: 190 VWSFGVLMWEVFS-EGKIPYENRSNSEVV---------EDISTGFRLYKPRLASTHV--- 236
Query: 544 VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
Q+ C + P DRP S ++R L
Sbjct: 237 ----YQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLV----AVKRLKEERTPGGELQFQTEVEMISMAVH 352
F +LG G FG VYKG + +G V A+K L+E +P + E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARG 409
++ RL G C+T T +L+ M G + +RE SQ L+W + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 467
++YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502
+A E + + ++DV+ YG+ + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H K+IHRD+K N+LL E + DFG + + + A+ GT+ ++
Sbjct: 120 ALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ GS+ L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD+ AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L+ +D + +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYL--- 133
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
LV+ +M +G ++ LR + + T + L G++YL + C +IH
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 483
RD+ A N L+ E V DFG+ + + +T + + +PE S + S K+D
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 484 VFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEA 542
V+ +G+++ E+ + G+ ++ +N + V P L + +V
Sbjct: 185 VWSFGVLMWEVFSEGKIPYE--NRSNSEVV---------EDISTGFRLYKPRLASTHV-- 231
Query: 543 EVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
Q+ C + P DRP S ++R L
Sbjct: 232 -----YQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 66
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM GS+ L+ L L P ++ A
Sbjct: 67 LRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIAS 122
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 123 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT 179
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G V L++ D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITE 121
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ G + L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
LV+ +M +G ++ LR + + T + L G++YL + C +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 483
RD+ A N L+ E V DFG+ + + +T + + +PE S + S K+D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 484 VFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEA 542
V+ +G+++ E+ + G+ ++ +N + V P L + +V
Sbjct: 187 VWSFGVLMWEVFSEGKIPYE--NRSNSEVV---------EDISTGFRLYKPRLASTHV-- 233
Query: 543 EVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
Q+ C + P DRP S ++R L
Sbjct: 234 -----YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 66
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM GS+ L+ L L P ++ A
Sbjct: 67 LRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIAS 122
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 123 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 179
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S + LG+G FG+V+ G + VA+K LK PG F E +++
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKK 69
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM+ G + L+ L L P +A A
Sbjct: 70 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIAS 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ +HRD++AANIL+ E V DFGLA+L++ + + I
Sbjct: 126 GMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
++ +S LG G FG+V+ G + VA+K LK PG F E +++
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLK----PGTMSPESFLEEAQIMKK 60
Query: 350 AVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H L++L + + E + +V YM GS+ L++ L L P +A A
Sbjct: 61 LKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAA 116
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G++Y+ IHRD+++ANIL+ + DFGLA+L++ + + I
Sbjct: 117 GMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
APE G+ + K+DV+ +GI+L EL+T R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ ++ GS+ L++ +D + +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 133
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGF 361
LG+G FG+V+ G + VA+K LK PG F E +++ H L++L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGNMSPEAFLQEAQVMKKLRHEKLVQL--Y 246
Query: 362 CMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E + +V YM+ GS+ L+ L L P +A A G++Y+
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---N 301
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD++AANIL+ E V DFGL +L++ + + I APE G+ +
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 481 KTDVFGYGIMLLELITGQR 499
K+DV+ +GI+L EL T R
Sbjct: 362 KSDVWSFGILLTELTTKGR 380
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 130
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 117
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 118 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTL 171
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G V L++ D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITE 121
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 171
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 267 FFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLA----DGSL 322
+ D EDP + Q + ++ + ++G G FG+V GRL
Sbjct: 20 YIDPETYEDPNRAVHQFAK------ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVA 73
Query: 323 VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 382
VA+K LK T F E ++ H N++ L G ++V +M NG++ +
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
LR+ + R G A G+ YL D +HRD+ A NIL++ V
Sbjct: 134 FLRKHDGQFTVIQLVGMLR---GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 443 DFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQR 499
DFGL++++ D + + TT + + APE + K + +DV+ YGI++ E+++ G+R
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 247
Query: 500 AF 501
+
Sbjct: 248 PY 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 119
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 121
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL---------PLDWPTRKRI--- 402
++ L G C ++ Y + G++ L+ R P L P + + K +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 116
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 117 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDL 166
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VAVK +KE E FQ M+ ++ H L++ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEF-FQEAQTMMKLS-HPKLVKFYGVCS 73
Query: 364 TPTERLLVYPYMANGSVASCLRER----PPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
+V Y++NG + + LR PSQL + G+++L H
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-------EMCYDVCEGMAFLESH--- 123
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKS 478
+ IHRD+ A N L+D + V DFG+ + + D +V++ + + APE K
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 479 SEKTDVFGYGIMLLELIT-GQRAFDL 503
S K+DV+ +GI++ E+ + G+ +DL
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 117
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 118 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTL 167
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 121
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 117
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 118 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDL 167
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL---------PLDWPTRKRI--- 402
++ L G C ++ Y + G++ L+ R P L P + + K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 118
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 119 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 172
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 119
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 121
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDL 171
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGR---LAD--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG+G FG V R L D G +VAVK+L+ T F+ E+E++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C + R L+ Y+ GS+ L++ +D + +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 131
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ IHR++ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K S +DV+ +G++L EL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HRD+ A N ++ +F +GDFG+ + + Y+ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYY 186
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 573 EGD 575
+ D
Sbjct: 287 KDD 289
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 118
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 119 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 168
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 304 LGRGGFGKVY--------KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRN 354
LG G FG+V K + + VAVK LK + T +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW-PTRK-----------RI 402
++ L G C ++ Y + G++ L+ R P L + P+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAV 461
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
R + +APE L + ++DV+ +G++L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + A+ GT+ ++
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + A+ GT+ ++
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 176
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
LSY H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGT 169
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
LSY H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGT 172
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 27/270 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
LV +M +G ++ LR + + T + L G++YL + C +IH
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 483
RD+ A N L+ E V DFG+ + + +T + + +PE S + S K+D
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 484 VFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEA 542
V+ +G+++ E+ + G+ ++ +N + V P L + +V
Sbjct: 188 VWSFGVLMWEVFSEGKIPYE--NRSNSEVV---------EDISTGFRLYKPRLASTHV-- 234
Query: 543 EVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
Q+ C + P DRP S ++R L
Sbjct: 235 -----YQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 123
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 177
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 228
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 119
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 169
Query: 463 -GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
LSY H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGT 169
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ ++ PE + EK D++ G++ E + G+ F+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HRD+ A N ++ +F +GDFG+ + + Y+ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 186
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 573 EGD 575
+ D
Sbjct: 287 KDD 289
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q A + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL G+ T L+ Y G+V L++ D A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 116
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
LSY H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 117 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 170
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
PE + EK D++ G++ E + G+ F+
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 36/269 (13%)
Query: 260 RRKPQEFFFDVPAEEDPEVHLGQLKRFSL-------RELQVATDSFSN------KNI--- 303
RRK QE + PE L +L+ ++ T S S+ KNI
Sbjct: 3 RRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLI 62
Query: 304 --LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 356 LRLRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSY 412
+R G + R ++ MA G + S LRE RP L +A A G Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGH 467
L ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ +
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKW 238
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ PE G + KTD + +G++L E+ +
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 213
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 228
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 21/228 (9%)
Query: 283 LKRFSLRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQ 341
L L L+ F ++G G +G+VYKGR + G L A+K + + T E + +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM--DVTGDEEEEIK 68
Query: 342 TEVEMIS-MAVHRNLLRLRGFCMTPT------ERLLVYPYMANGSVASCLRERPPSQLPL 394
E+ M+ + HRN+ G + + LV + GSV ++ + L
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 395 DWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
+W I RGLS+LH H K+IHRD+K N+LL E E + DFG++ +D
Sbjct: 129 EWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 455 THVTTAVRGTIGHIAPEYLSTGKSSE-----KTDVFGYGIMLLELITG 497
T + GT +APE ++ ++ + K+D++ GI +E+ G
Sbjct: 184 GRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 228
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 37/232 (15%)
Query: 298 FSNKNI-----LGRGGFGKVYK-------GRLADGSLVAVKRLKEERTPGGELQFQTEVE 345
F KN+ LG G FGKV K GR A + VAVK LKE +P +E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP---PSQL---------P 393
++ H ++++L G C LL+ Y GS+ LRE P L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 394 LDWPTRKRIALGS--------ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 445
LD P + + +G ++G+ YL + K++HRD+ A NIL+ E + + DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 446 LAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
L++ + +D++V + R + +A E L + ++DV+ +G++L E++T
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 304 LGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FGKV+ D LVAVK LKE + FQ E E+++M H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 78
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL-----------PLDWPTRKRIALGS 406
G C L+V+ YM +G + LR P PL +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTI 465
A G+ YL +HRD+ N L+ + +GDFG+++ + D + V I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ PE + K + ++DV+ +G++L E+ T
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 213
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 304 LGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FGKV+ D LVAVK LKE + FQ E E+++M H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 84
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL-----------PLDWPTRKRIALGS 406
G C L+V+ YM +G + LR P PL +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTI 465
A G+ YL +HRD+ N L+ + +GDFG+++ + D + V I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ PE + K + ++DV+ +G++L E+ T
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 205
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 303 ILGRGGFGKVYK-GRLADGSLVAVK---RLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
+LG+G FG+ K G ++ +K R EE + F EV+++ H N+L+
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEE----TQRTFLKEVKVMRCLEHPNVLKF 72
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
G + Y+ G++ ++ SQ P W R A A G++YLH
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMD-SQYP--WSQRVSFAKDIASGMAYLHSM-- 127
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYK------------DTHVTTAVRGTI 465
IIHRD+ + N L+ E VV DFGLA+LM D K D V G
Sbjct: 128 -NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
+APE ++ EK DVF +GI+L E+I
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 230
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 214
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 214
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 20/253 (7%)
Query: 257 WWRRRKPQEFFFDVP-AEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG 315
+++ + P+ F+ P E+P G+ R RE++ + + I+G G G+V G
Sbjct: 15 YFQGKLPEPQFYAEPHTYEEP----GRAGRSFTREIEAS--RIHIEKIIGSGDSGEVCYG 68
Query: 316 RL----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371
RL VA+K LK T F +E ++ H N++RL G ++V
Sbjct: 69 RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 431
YM NGS+ + LR + R G G+ YL D +HRD+ A N+
Sbjct: 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL---SDLGYVHRDLAARNV 182
Query: 432 LLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGI 489
L+D V DFGL++++ D + TT + I APE ++ S +DV+ +G+
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 490 MLLELIT-GQRAF 501
++ E++ G+R +
Sbjct: 243 VMWEVLAYGERPY 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWMP 220
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ ++ + +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI-YRASYYRKGGCAMLPVKWMP 214
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 304 LGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FGKV+ D LVAVK LKE + FQ E E+++M H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 107
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL-----------PLDWPTRKRIALGS 406
G C L+V+ YM +G + LR P PL +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTI 465
A G+ YL +HRD+ N L+ + +GDFG+++ + D + V I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ PE + K + ++DV+ +G++L E+ T
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISM 349
++ +S + LG G FG+V+ + VAVK +K PG F E ++
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKT 233
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
H L++L +T ++ +MA GS+ L+ S+ PL P + A G
Sbjct: 234 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEG 290
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
++++ IHRD++AANIL+ + DFGLA++ + I A
Sbjct: 291 MAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTA 337
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
PE ++ G + K+DV+ +GI+L+E++T R
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 119
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + +FG + + + T + GT+
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 173
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVE 345
++ Q A + F LG+G FG VY R + A+K L + + G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ S H N+LRL G+ T L+ Y G+V L++ D
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 118
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
A LSY H ++IHRD+K N+LL E + +FG + + + T + GT+
Sbjct: 119 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 172
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G+ F+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 304 LGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV R G VAVK LK E + E+E++ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C L+ ++ +GS+ L P ++ ++ + + A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ +HRD+ A N+L++ E + +GDFGL K + D + V + APE L
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K +DV+ +G+ L EL+T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 364 TPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
L +V YMA GS+ LR R S L D + +L + YL + +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN---NFV 124
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+ A N+L+ E+ A V DFGL K V+ T APE L K S K+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 483 DVFGYGIMLLELITGQR 499
DV+ +GI+L E+ + R
Sbjct: 181 DVWSFGILLWEIYSFGR 197
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 304 LGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV R G VAVK LK E + E+E++ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+G C L+ ++ +GS+ L P ++ ++ + + A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
+ +HRD+ A N+L++ E + +GDFGL K + D + V + APE L
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 475 TGKSSEKTDVFGYGIMLLELIT 496
K +DV+ +G+ L EL+T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 302 NILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNLLRL 358
+ LG G FGKV G+ G VAVK L ++ ++ + + E++ + + H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 359 RGFCMTPTERLLVYPYMANGSVAS--CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
TP++ +V Y++ G + C R LD +R+ G+ Y H H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGR------LDEKESRRLFQQILSGVDYCHRH 135
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
++HRD+K N+LLD A + DFGL+ +M D G+ + APE +S G
Sbjct: 136 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVIS-G 189
Query: 477 K--SSEKTDVFGYGIMLLELITGQRAFD 502
+ + + D++ G++L L+ G FD
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 27/270 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
LV+ +M +G ++ LR + + T + L G++YL + +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 483
RD+ A N L+ E V DFG+ + + +T + + +PE S + S K+D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 484 VFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEA 542
V+ +G+++ E+ + G+ ++ +N + V P L + +V
Sbjct: 187 VWSFGVLMWEVFSEGKIPYE--NRSNSEVV---------EDISTGFRLYKPRLASTHV-- 233
Query: 543 EVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
Q+ C + P DRP S ++R L
Sbjct: 234 -----YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 37/232 (15%)
Query: 298 FSNKNI-----LGRGGFGKVYK-------GRLADGSLVAVKRLKEERTPGGELQFQTEVE 345
F KN+ LG G FGKV K GR A + VAVK LKE +P +E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP---PSQL---------P 393
++ H ++++L G C LL+ Y GS+ LRE P L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 394 LDWPTRKRIALGS--------ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 445
LD P + + +G ++G+ YL + K++HRD+ A NIL+ E + + DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 446 LAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
L++ + +D+ V + R + +A E L + ++DV+ +G++L E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 298 FSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F+ +G+G FG+V+KG +VA+K + E Q E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ G + ++ ++ Y+ GS LR P + + ++ + +GL YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL-----KGLDYLHSE 139
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
K IHRD+KAAN+LL E+ + + DFG+A + T V GT +APE +
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQS 195
Query: 477 KSSEKTDVFGYGIMLLELITGQ 498
K D++ GI +EL G+
Sbjct: 196 AYDSKADIWSLGITAIELAKGE 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 364 TPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
L +V YMA GS+ LR R S L D + +L + YL + +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN---NFV 139
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+ A N+L+ E+ A V DFGL K V+ T APE L K S K+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 195
Query: 483 DVFGYGIMLLELITGQR 499
DV+ +GI+L E+ + R
Sbjct: 196 DVWSFGILLWEIYSFGR 212
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ + + +
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRKGGCAMLPVKWMP 254
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 20/253 (7%)
Query: 257 WWRRRKPQEFFFDVP-AEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG 315
+++ + P+ F+ P E+P G+ R RE++ + + I+G G G+V G
Sbjct: 15 YFQGKLPEPQFYAEPHTYEEP----GRAGRSFTREIEAS--RIHIEKIIGSGDSGEVCYG 68
Query: 316 RL----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371
RL VA+K LK T F +E ++ H N++RL G ++V
Sbjct: 69 RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 431
YM NGS+ + LR + R G G+ YL D +HRD+ A N+
Sbjct: 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL---SDLGYVHRDLAARNV 182
Query: 432 LLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGI 489
L+D V DFGL++++ D TT + I APE ++ S +DV+ +G+
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 490 MLLELIT-GQRAF 501
++ E++ G+R +
Sbjct: 243 VMWEVLAYGERPY 255
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 15/215 (6%)
Query: 294 ATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLK---EERTPGGELQFQTEVEMISM 349
++ F LG G + VYKG G VA+K +K EE TP ++ E+ ++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKE 59
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP--LDWPTRKRIALGSA 407
H N++RL T + LV+ +M N + + R P L+ K
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
+GL++ H++ KI+HRD+K N+L+++ + +GDFGLA+ ++ V T+ +
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174
Query: 468 IAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAF 501
AP+ L ++ S D++ G +L E+ITG+ F
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 281 GQLKRFSLRELQVATDS---FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGG 336
G LK + EL D FS+ +G G FG VY R + + +VA+K++
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN 95
Query: 337 ELQFQ---TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLP 393
E ++Q EV + H N ++ RG + LV Y GS + L + P
Sbjct: 96 E-KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVH---KKP 150
Query: 394 LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453
L + G+ +GL+YLH H +IHRDVKA NILL E +GDFG A +M
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207
Query: 454 DTHVTTAVRGTIGHIAPEY---LSTGKSSEKTDVFGYGIMLLEL 494
+ V GT +APE + G+ K DV+ GI +EL
Sbjct: 208 NXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 364 TPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
L +V YMA GS+ LR R S L D + +L + YL + +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN---NFV 311
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+ A N+L+ E+ A V DFGL K V+ T APE L K S K+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 367
Query: 483 DVFGYGIMLLELITGQR 499
DV+ +GI+L E+ + R
Sbjct: 368 DVWSFGILLWEIYSFGR 384
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HR++ A N ++ +F +GDFG+ + + Y+ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 186
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 573 EGD 575
+ D
Sbjct: 287 KDD 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 186
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 304 LGRGGFGKVYKGRLA----DGS--LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG+VY+G+++ D S VAVK L E + EL F E +IS H+N++R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLH 414
G + R ++ MA G + S LRE RP L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 415 DHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
++ IHRD+ A N LL A +GDFG+A+ + Y+ + + +
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRKGGCAMLPVKWMP 231
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE G + KTD + +G++L E+ +
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
H N+LRL G+ T L+ Y G+V L++ R Q + T
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE------L 121
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
A LSY H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 122 ANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLD 175
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
++ PE + EK D++ G++ E + G F+
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 184
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 41/289 (14%)
Query: 304 LGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
LG+G FG VY+G D + VAVK + E + ++F E ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWPTRKRIALGSARGLS 411
L G L+V MA+G + S LR E P + P ++A A G++
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIA 469
YL+ K +HRD+ A N ++ +F +GDFG+ + + Y+ + +G + +A
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMA 199
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 529
PE L G + +D++ +G++L E IT L+N+ +L +V
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VLKFV----------- 244
Query: 530 XVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575
+ Y++ E++ + +C Q +P RP E+V +L+ D
Sbjct: 245 -----MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HR++ A N ++ +F +GDFG+ + + Y+ +
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 187
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 243
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 244 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
Query: 573 EGD 575
+ D
Sbjct: 288 KDD 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 193
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RP-----PSQLPLDW 396
E ++ +++RL G L++ M G + S LR RP P P
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 183
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RP-----PSQLPLDW 396
E ++ +++RL G L++ M G + S LR RP P P
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 193
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HRD+ A N ++ +F +GDFG+ + + D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-X 186
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 573 EGD 575
+ D
Sbjct: 287 KDD 289
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 180
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQ---TEVEMISMAVHR 353
FS+ +G G FG VY R + + +VA+K++ E ++Q EV + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHP 75
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N ++ RG + LV Y GS + L + PL + G+ +GL+YL
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL 131
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY- 472
H H +IHRDVKA NILL E +GDFG A +M + V GT +APE
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
Query: 473 --LSTGKSSEKTDVFGYGIMLLEL 494
+ G+ K DV+ GI +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER-----PPSQLPLDWPTRKRIALGS---A 407
L G C P L+V + G++++ LR + P L D+ T + + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTI 465
+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD R +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI-YKDPDYVRKGDARLPL 210
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 524
+APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRA-- 268
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 269 --------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 187
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 186
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 215
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 298 FSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F+ +G+G FG+V+KG +VA+K + E Q E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ G + T+ ++ Y+ GS L P PLD I +GL YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATILREILKGLDYLHSE 143
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
K IHRD+KAAN+LL E E + DFG+A + T V GT +APE +
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 199
Query: 477 KSSEKTDVFGYGIMLLELITGQ 498
K D++ GI +EL G+
Sbjct: 200 AYDSKADIWSLGITAIELARGE 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 298 FSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F+ +G+G FG+V+KG +VA+K + E Q E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ G + T+ ++ Y+ GS L P LD I +GL YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSE 138
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLST 475
K IHRD+KAAN+LL E E + DFG+A + DT + GT +APE +
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 476 GKSSEKTDVFGYGIMLLELITGQ 498
K D++ GI +EL G+
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 298 FSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F+ +G+G FG+V+KG +VA+K + E Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ G + T+ ++ Y+ GS L P PLD I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATILREILKGLDYLHSE 123
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
K IHRD+KAAN+LL E E + DFG+A + T V GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 179
Query: 477 KSSEKTDVFGYGIMLLELITGQ 498
K D++ GI +EL G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 68 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 127
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HRD+ A N ++ +F +GDFG+ + + D
Sbjct: 128 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-X 183
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 239
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 240 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
Query: 573 EGD 575
+ D
Sbjct: 284 KDD 286
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
Q + F LG+G FG VY R + A+K L + + G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
H N+LRL G+ T L+ Y G+V L++ R Q + T
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE------L 121
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---- 462
A LSY H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 122 ANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLC 171
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
GT+ ++ PE + EK D++ G++ E + G F+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 298 FSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F+ + +G+G FG+VYKG +VA+K + E Q E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
R G + T+ ++ Y+ GS L+ P + + R+ + +GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL-----KGLDYLHSE 135
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLST 475
+ IHRD+KAAN+LL E+ + + DFG+A + DT + GT +APE +
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 476 GKSSEKTDVFGYGIMLLELITGQ 498
K D++ GI +EL G+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGE 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 301 KNILGRGGFGKVYKGRLADGSL---VAVKRLKEERTPGGELQFQTEVEMI-SMAVHRNLL 356
++++G G FG+V K R+ L A+KR+KE + F E+E++ + H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLR-----ERPP-------SQLPLDWPTRKRIAL 404
L G C L Y +G++ LR E P + L A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
ARG+ YL + IHRD+ A NIL+ E + A + DFGL++ + V+ T
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 189
Query: 465 IGHI-----APEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + A E L+ + +DV+ YG++L E+++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 36/256 (14%)
Query: 271 PAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVK--- 326
P+E+ +V K LR+L+V LG G FG V+KG + +G + +
Sbjct: 16 PSEKANKVLARIFKETELRKLKV----------LGSGVFGTVHKGVWIPEGESIKIPVCI 65
Query: 327 RLKEERTPGGELQFQTEVE-MISMAV--HRNLLRLRGFCMTPTERL-LVYPYMANGSVAS 382
++ E+++ G FQ + M+++ H +++RL G C P L LV Y+ GS+
Sbjct: 66 KVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLD 121
Query: 383 CLRERPPS---QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEA 439
+R+ + QL L+W + A+G+ YL +H ++HR++ A N+LL +
Sbjct: 122 HVRQHRGALGPQLLLNW------GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQV 172
Query: 440 VVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-G 497
V DFG+A L+ D + + + I +A E + GK + ++DV+ YG+ + EL+T G
Sbjct: 173 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 232
Query: 498 QRAFDLARLANDDDVM 513
+ RLA D++
Sbjct: 233 AEPYAGLRLAEVPDLL 248
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 41/303 (13%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTE 343
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDWP 397
++ +++RL G L+V MA+G + S LR E P + P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
++A A G++YL+ K +HRD+ A N ++ +F +GDFG+ + + D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-X 186
Query: 458 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+G + +APE L G + +D++ +G++L E IT L+N+ +L
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAE---VEQLIQVALLCTQGSPMDRPKMSEVVRML 572
+V + Y++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 573 EGD 575
+ D
Sbjct: 287 KDD 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 364 TPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
L +V YMA GS+ LR R S L D + +L + YL + +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGN---NFV 130
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+ A N+L+ E+ A V DFGL K V+ T APE L S K+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKS 186
Query: 483 DVFGYGIMLLELITGQR 499
DV+ +GI+L E+ + R
Sbjct: 187 DVWSFGILLWEIYSFGR 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 298 FSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F+ +G+G FG+V+KG +VA+K + E Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ G + T+ ++ Y+ GS L P PLD I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATILREILKGLDYLHSE 123
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLST 475
K IHRD+KAAN+LL E E + DFG+A + DT + GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 476 GKSSEKTDVFGYGIMLLELITGQ 498
K D++ GI +EL G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + D L VAVK LK + +E++++S + H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL------PLDWPTRKRIALGSARGL 410
L G C L++ Y G + + LR + + L PL+ + A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIA 469
++L IHRDV A N+LL A +GDFGLA+ +M+ + V R + +A
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE + + ++DV+ YGI+L E+ +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 301 KNILGRGGFGKVYKGRLADGSL---VAVKRLKEERTPGGELQFQTEVEMI-SMAVHRNLL 356
++++G G FG+V K R+ L A+KR+KE + F E+E++ + H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLR-----ERPP-------SQLPLDWPTRKRIAL 404
L G C L Y +G++ LR E P + L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
ARG+ YL + IHRD+ A NIL+ E + A + DFGL++ + V+ T
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 199
Query: 465 IGHI-----APEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + A E L+ + +DV+ YG++L E+++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL-KEERTPGGELQ-FQTEVEMISMAVH 352
+ F N+LG+G F VY+ + G VA+K + K+ G +Q Q EV++ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
++L L + LV NG + L+ R P + G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSENEARHFMHQIITGMLY 127
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPE 471
LH H I+HRD+ +N+LL + DFGLA + + H T GT +I+PE
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPE 182
Query: 472 YLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLAND-DDVMLLDW 517
+ ++DV+ G M L+ G+ FD + N + V+L D+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER-----PPSQLPLDWPTRKRIALGS---A 407
L G C P L+V + G++++ LR + P L D+ T + + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTI 465
+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPL 210
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 524
+APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-- 268
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 269 --------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 268 FDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVK 326
F E D Q K L + + + FS I+GRGGFG+VY R AD G + A+K
Sbjct: 162 FQKFIESDKFTRFCQWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 327 RLKEERTP--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPYMANGS 379
L ++R GE E M+S+ + + CM TP + + M G
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGD 278
Query: 380 VASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438
+ L + S+ + + + I GL ++H+ +++RD+K ANILLDE
Sbjct: 279 LHYHLSQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGH 330
Query: 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITG 497
+ D GLA K H + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 331 VRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 498 QRAFDLARLANDDDV 512
F + + ++
Sbjct: 388 HSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 268 FDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVK 326
F E D Q K L + + + FS I+GRGGFG+VY R AD G + A+K
Sbjct: 161 FQKFIESDKFTRFCQWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 219
Query: 327 RLKEERTP--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPYMANGS 379
L ++R GE E M+S+ + + CM TP + + M G
Sbjct: 220 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGD 277
Query: 380 VASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438
+ L + S+ + + + I GL ++H+ +++RD+K ANILLDE
Sbjct: 278 LHYHLSQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGH 329
Query: 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITG 497
+ D GLA K H + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 330 VRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Query: 498 QRAFDLARLANDDDV 512
F + + ++
Sbjct: 387 HSPFRQHKTKDKHEI 401
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 268 FDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVK 326
F E D Q K L + + + FS I+GRGGFG+VY R AD G + A+K
Sbjct: 162 FQKFIESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 327 RLKEERTP--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPYMANGS 379
L ++R GE E M+S+ + + CM TP + + M G
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGD 278
Query: 380 VASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438
+ L + S+ + + + I GL ++H+ +++RD+K ANILLDE
Sbjct: 279 LHYHLSQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGH 330
Query: 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITG 497
+ D GLA K H + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 331 VRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 498 QRAFDLARLANDDDV 512
F + + ++
Sbjct: 388 HSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 268 FDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVK 326
F E D Q K L + + + FS I+GRGGFG+VY R AD G + A+K
Sbjct: 162 FQKFIESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 327 RLKEERTP--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPYMANGS 379
L ++R GE E M+S+ + + CM TP + + M G
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGD 278
Query: 380 VASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438
+ L + S+ + + + I GL ++H+ +++RD+K ANILLDE
Sbjct: 279 LHYHLSQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGH 330
Query: 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITG 497
+ D GLA K H + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 331 VRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 498 QRAFDLARLANDDDV 512
F + + ++
Sbjct: 388 HSPFRQHKTKDKHEI 402
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 302 NILGRGGFGKVYKGRLA--DGS--LVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLL 356
ILG G FG V +G L DG+ VAVK +K + + E++ F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 357 RLRGFCMTPTER-----LLVYPYMANGSVASCLR----ERPPSQLPLDWPTRKRIALGSA 407
RL G C+ + + +++ P+M G + + L E P +PL T + + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDIA 157
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV-RGTIG 466
G+ YL + +HRD+ A N +L ++ V DFGL+K + D + + + +
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
IA E L+ + K+DV+ +G+ + E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + D L VAVK LK + +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL------PLDWPTRKRIALGSARGL 410
L G C L++ Y G + + LR + + L PL+ + A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIA 469
++L IHRDV A N+LL A +GDFGLA+ +M+ + V R + +A
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT 496
PE + + ++DV+ YGI+L E+ +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 37/232 (15%)
Query: 298 FSNKNI-----LGRGGFGKVYK-------GRLADGSLVAVKRLKEERTPGGELQFQTEVE 345
F KN+ LG G FGKV K GR A + VAVK LKE +P +E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP---PSQL---------P 393
++ H ++++L G C LL+ Y GS+ LRE P L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 394 LDWPTRKRIALGS--------ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 445
LD P + + +G ++G+ YL + ++HRD+ A NIL+ E + + DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 446 LAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
L++ + +D+ V + R + +A E L + ++DV+ +G++L E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 304 LGRGGFGKVYK-GRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRL--R 359
+G G +G+ K R +DG ++ K L E Q +EV ++ H N++R R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD- 418
T T +V Y G +AS + + + LD R+ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 419 -PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++HRD+K AN+ LD + +GDFGLA+++++ DT A GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 478 SSEKTDVFGYGIMLLEL 494
+EK+D++ G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N + E+F +GDFG+ + + Y+ +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDY 180
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 461
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 210
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 271 RA----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 461
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDXVRKGDA 210
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 271 RA----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 461
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 212
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 272
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 273 RA----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLR 359
LG+GGF K ++ AD V ++ + P + E+ + H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
GF +V S+ + R P ++I LG YLH +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN--- 158
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE LS S
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 480 EKTDVFGYGIMLLELITGQRAFDLARL 506
+ DV+ G ++ L+ G+ F+ + L
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCL 244
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FGKVYK + + S++A ++ + ++ + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
++ + A G+V + + E + PL + + + L+YLHD+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 424 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
RD+KA NIL + + + DFG++ + + +D+ + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 480 E-----KTDVFGYGIMLLEL 494
+ K DV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLR 359
LG+GGF K ++ AD V ++ + P + E+ + H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
GF +V S+ + R P ++I LG YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN--- 136
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE LS S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 480 EKTDVFGYGIMLLELITGQRAFDLARL 506
+ DV+ G ++ L+ G+ F+ + L
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLR 359
LG+GGF K ++ AD V ++ + P + E+ + H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
GF +V S+ + R P ++I LG YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN--- 136
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE LS S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 480 EKTDVFGYGIMLLELITGQRAFDLARL 506
+ DV+ G ++ L+ G+ F+ + L
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 357 RLRGFCMTPTERLLVYP-YMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 461
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 201
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 262 RA----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLR 359
LG+GGF K ++ AD V ++ + P + E+ + H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
GF +V S+ + R P ++I LG YLH +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN--- 140
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE LS S
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 480 EKTDVFGYGIMLLELITGQRAFDLARL 506
+ DV+ G ++ L+ G+ F+ + L
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCL 226
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLR 359
LG+GGF K ++ AD V ++ + P + E+ + H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
GF +V S+ + R P ++I LG YLH +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN--- 160
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE LS S
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 480 EKTDVFGYGIMLLELITGQRAFDLARL 506
+ DV+ G ++ L+ G+ F+ + L
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCL 246
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FGKVYK + + S++A ++ + ++ + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
++ + A G+V + + E + PL + + + L+YLHD+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 424 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
RD+KA NIL + + + DFG++ + + +D+ + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 480 E-----KTDVFGYGIMLLEL 494
+ K DV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 26/225 (11%)
Query: 302 NILGRGGFGKVYKGR-LADGSLVAVK---RLKEERTPGGELQFQTEVE-MISMAV--HRN 354
+LG G FG V+KG + +G + + ++ E+++ G FQ + M+++ H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 76
Query: 355 LLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPS---QLPLDWPTRKRIALGSARGL 410
++RL G C P L LV Y+ GS+ +R+ + QL L+W + A+G+
Sbjct: 77 IVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGM 128
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIA 469
YL +H ++HR++ A N+LL + V DFG+A L+ D + + + I +A
Sbjct: 129 YYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVM 513
E + GK + ++DV+ YG+ + EL+T G + RLA D++
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 357 RLRGFCMTPTERLLVYP-YMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 461
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 201
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 262 RA----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLR 359
LG+GGF K ++ AD V ++ + P + E+ + H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
GF +V S+ + R P ++I LG YLH +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHRN--- 134
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE LS S
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 480 EKTDVFGYGIMLLELITGQRAFDLARL 506
+ DV+ G ++ L+ G+ F+ + L
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCL 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 301 KNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
K LG G FGKV+ D LVAVK LK+ T FQ E E+++ H +
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEH 78
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPL-DWPTRK-----------RI 402
+++ G C ++V+ YM +G + LR P + L D R+ I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A A G+ YL +HRD+ N L+ +GDFG++ +D + T R
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS-----RDVYSTDYYR 190
Query: 463 GTIGH-------IAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
GH + PE + K + ++DV+ +G++L E+ T
Sbjct: 191 -VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 461
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 247
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 307
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 308 RA----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 301 KNILGRGGFGKVYKGRLADGSL---VAVKRLKEERTPGGELQFQTEVEMI-SMAVHRNLL 356
++++G G FG+V K R+ L A+KR+KE + F E+E++ + H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLR-----ERPP-------SQLPLDWPTRKRIAL 404
L G C L Y +G++ LR E P + L A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
ARG+ YL + IHR++ A NIL+ E + A + DFGL++ + V+ T
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 196
Query: 465 IGHI-----APEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + A E L+ + +DV+ YG++L E+++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + D
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 180 RKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + D L VAVK LK + +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW----------PTRKRIALGS 406
L G C L++ Y G + + LR + P L + +R + S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 407 --ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRG 463
A+G+++L IHRDV A N+LL A +GDFGLA+ +M+ + V R
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ +APE + + ++DV+ YGI+L E+ +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FGKVYK + + S++A ++ + ++ + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
++ + A G+V + + E + PL + + + L+YLHD+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 424 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
RD+KA NIL + + + DFG++ + + +D + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSK 213
Query: 480 E-----KTDVFGYGIMLLEL 494
+ K DV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 33/210 (15%)
Query: 304 LGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV G +VAVK LKE P +Q E+E++ H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPP------SQLPLDWPTRKRIALGSARGL 410
+G C E+ LV Y+ GS LR+ P +QL L A G+
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGS----LRDYLPRHCVGLAQLLL-------FAQQICEGM 124
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIG 466
+YLH IHR + A N+LLD + +GDFGLAK + + H VR +
Sbjct: 125 AYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSPVF 179
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
APE L K +DV+ +G+ L EL+T
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 301 KNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
K LG G FGKV+ D LVAVK LK+ + F E E+++ H +
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEH 76
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL---------PLDWPTRKRIALG 405
+++ G C+ ++V+ YM +G + LR P + L IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGT 464
A G+ YL +HRD+ N L+ E +GDFG+++ + D + V
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
I + PE + K + ++DV+ G++L E+ T
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSL-------VAVKRLKEERTPGGELQFQT 342
E +VA + + LG+G FG VY+G +A G + VA+K + E + ++F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------ERPPSQLPLDW 396
E ++ +++RL G L++ M G + S LR E P P
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
++A A G++YL+ + K +HRD+ A N ++ E+F +GDFG+ + + D
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 457 VTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+G + ++PE L G + +DV+ +G++L E+ T
Sbjct: 189 RKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 33/210 (15%)
Query: 304 LGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV G +VAVK LKE P +Q E+E++ H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPP------SQLPLDWPTRKRIALGSARGL 410
+G C E+ LV Y+ GS LR+ P +QL L A G+
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGS----LRDYLPRHCVGLAQLLL-------FAQQICEGM 125
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIG 466
+YLH IHR + A N+LLD + +GDFGLAK + + H VR +
Sbjct: 126 AYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSPVF 180
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
APE L K +DV+ +G+ L EL+T
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 134
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 304 LGRGGFGKVYK-GRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRL--R 359
+G G +G+ K R +DG ++ K L E Q +EV ++ H N++R R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD- 418
T T +V Y G +AS + + + LD R+ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 419 -PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++HRD+K AN+ LD + +GDFGLA+++++ DT GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 478 SSEKTDVFGYGIMLLEL 494
+EK+D++ G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 301 KNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K LG GGFG V + D G VA+K+ ++E +P ++ E++++ H N++ R
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 360 GF-----CMTPTER-LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
+ P + LL Y G + L + + P R ++ S+ L YL
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS-ALRYL 137
Query: 414 HDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
H++ +IIHRD+K NI+L + + D G AK +D + + T GT+ ++AP
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAP 192
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E L K + D + +G + E ITG R F
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 301 KNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
K LG GGFG V + D G VA+K+ ++E +P ++ E++++ H N++ R
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 360 GF-----CMTPTER-LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
+ P + LL Y G + L + + P R ++ S+ L YL
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS-ALRYL 138
Query: 414 HDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
H++ +IIHRD+K NI+L + + D G AK +D + + T GT+ ++AP
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAP 193
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E L K + D + +G + E ITG R F
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 41/290 (14%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER--------PPSQLPLDWPTRKRIALGS- 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 407 --ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRG 463
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXX 522
+ +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 523 XXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 273 ----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEM--- 346
+AT + +G G +G VYK R G VA LK R P GE L T E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGEEGLPISTVREVALL 57
Query: 347 --ISMAVHRNLLRLRGFCMTP-TER----LLVYPYMANGSVASCLRERPPSQLPLDWPTR 399
+ H N++RL C T T+R LV+ ++ + + + L + PP LP + T
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--TI 114
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 459
K + RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPV 171
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ-------------RAFDLARL 506
V T+ + APE L + D++ G + E+ + + FDL L
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 229
Query: 507 ANDDD 511
+DD
Sbjct: 230 PPEDD 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEM--- 346
+AT + +G G +G VYK R G VA LK R P GE L T E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGEEGLPISTVREVALL 57
Query: 347 --ISMAVHRNLLRLRGFCMTP-TER----LLVYPYMANGSVASCLRERPPSQLPLDWPTR 399
+ H N++RL C T T+R LV+ ++ + + + L + PP LP + T
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--TI 114
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 459
K + RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV 171
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ-------------RAFDLARL 506
V T+ + APE L + D++ G + E+ + + FDL L
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 229
Query: 507 ANDDD 511
+DD
Sbjct: 230 PPEDD 234
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 40/289 (13%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER-------PPSQLPLDWPTRKRIALGS-- 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 407 -ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGT 464
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXX 523
+ +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA- 272
Query: 524 XXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 273 ---------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 130
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 130
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 302 NILGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVEMIS-MAVHRN 354
+LG G FGKV + VAVK LKE+ +E++M++ + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPP--SQLPLDWPTRKRI---------- 402
++ L G C L++ Y G + + LR + S+ +++ +KR+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 403 -------ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKD 454
A A+G+ +L +HRD+ A N+L+ + DFGLA+ +M +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 455 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
V R + +APE L G + K+DV+ YGI+L E+ +
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTE--VEMISMAVHRNLLRL-- 358
++GRG +G VYKG L D VAVK + F E + + + H N+ R
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF----SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 359 ---RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH- 414
R E LLV Y NGS+ L S DW + R+A RGL+YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--------YKDTHVTTAV 461
DH P I HRD+ + N+L+ + V+ DFGL+ + +D + V
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 462 RGTIGHIAPEYLSTG-------KSSEKTDVFGYGIMLLELI 495
GTI ++APE L + ++ D++ G++ E+
Sbjct: 190 -GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VR 462
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXX 521
+ +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 522 XXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 272 A----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 45/237 (18%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLK--EERTPGGELQFQTEVEMI 347
L+ A+D F +LG+G FG+V K R A D A+K+++ EE+ +EV ++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS----TILSEVMLL 56
Query: 348 SMAVHRNLLRL-------RGFC--MTPTER----LLVYPYMANGSVASCLR-ERPPSQLP 393
+ H+ ++R R F MT ++ + Y NG++ + E Q
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 394 LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK----- 448
W ++I LSY+H IIHRD+K NI +DE +GDFGLAK
Sbjct: 117 EYWRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 449 ----LMDYKDT-----HVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGIMLLELI 495
+D ++ ++T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 304 LGRGGFGKVY-----KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV G +VAVK LK + P ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS--------AR 408
+G C E+ LV Y+ GS+ D+ R I L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR-------------DYLPRHSIGLAQLLLFAQQICE 128
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
G++YLH IHR++ A N+LLD + +GDFGLAK + + H VR
Sbjct: 129 GMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSP 183
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ APE L K +DV+ +G+ L EL+T
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 130
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 140
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 134
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVK----------RLKEERTPGGELQFQTEVEMISMAVHR 353
LG GG VY LA+ +++ +K R KEE +F+ EV S H+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLK----RFEREVHNSSQLSHQ 71
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N++ + LV Y+ L E S PL T G+ +
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIE----GPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
HD +I+HRD+K NIL+D + DFG+AK + T V GT+ + +PE
Sbjct: 128 HDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 474 STGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ E TD++ GI+L E++ G+ F+
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 304 LGRGGFGKVYKGRLADGS----LVAVKRLKEE--RTPGGELQFQTEVEMISMAVHRNLLR 357
LG G FG V +G S VAVK LK + P F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
L G +TP ++ V GS+ LR+ L T R A+ A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLESK- 140
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 475
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 476 GKSSEKTDVFGYGIMLLELIT 496
S +D + +G+ L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 357 RLRGFCMTPTERLLVYP-YMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VR 462
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXX 521
+ +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 522 XXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 263 A----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 357 RLRGFCMTPTERLLVY-PYMANGSVASCLRER---------PPSQLPLDWPTRKRIALGS 406
L G C P L+V + G++++ LR + P L D+ T + + S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 407 ---ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VR 462
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXX 521
+ +APE + + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 522 XXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 263 A----------PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 304 LGRGGFGKVYKGR--LADGSLVAVKRLK----EERTPGGELQFQTEVEMISMAVHRNLLR 357
+G G +GKV+K R G VA+KR++ EE P ++ + + H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 358 LRGFCMTP-----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L C T+ LV+ ++ + + + L + P +P + T K + RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE--TIKDMMFQLLRGLDF 135
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH H +++HRD+K NIL+ + + DFGLA++ ++ T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEV 190
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF----DLARLANDDDVMLL----DW 517
L + D++ G + E+ + F D+ +L DV+ L DW
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 101/230 (43%), Gaps = 23/230 (10%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQ------FQTEV 344
++ D+F +LG+G FGKV R+ + G L AVK LK++ LQ TE
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI----LQDDDVECTMTEK 74
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
++S+A + L C +RL NG L D + A
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGD---LMFHIQKSRRFDEARARFYAA 131
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-G 463
L +LHD II+RD+K N+LLD E + DFG+ K + VTTA G
Sbjct: 132 EIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCG 186
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
T +IAPE L D + G++L E++ G F+ N+DD+
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE---AENEDDLF 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 303 ILGR-GGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
I+G G FGKVYK + + S++A ++ + ++ + E+++++ H N+++L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
++ + A G+V + + E + PL + + + L+YLHD+ KI
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KI 129
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE- 480
IHRD+KA NIL + + + DFG++ + GT +APE + S +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 481 ----KTDVFGYGIMLLEL 494
K DV+ GI L+E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 124
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 304 LGRGGFGKVYKGR--LADGSLVAVKRLK----EERTPGGELQFQTEVEMISMAVHRNLLR 357
+G G +GKV+K R G VA+KR++ EE P ++ + + H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 358 LRGFCMTP-----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L C T+ LV+ ++ + + + L + P +P + T K + RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE--TIKDMMFQLLRGLDF 135
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH H +++HRD+K NIL+ + + DFGLA++ ++ T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEV 190
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF----DLARLANDDDVMLL----DW 517
L + D++ G + E+ + F D+ +L DV+ L DW
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 304 LGRGGFGKV-YKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMISMAVHRNLLRLRGF 361
+G GGF KV + G +VA+K + ++ T G +L + +TE+E + H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
T + +V Y G L + SQ L + + ++Y+H
Sbjct: 77 LETANKIFMVLEYCPGGE----LFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GY 129
Query: 422 IHRDVKAANILLDEEFEAVVGDFGL-AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-- 478
HRD+K N+L DE + + DFGL AK KD H+ T G++ + APE L GKS
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPE-LIQGKSYL 187
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515
+ DV+ GI+L L+ G FD DD+VM L
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFD------DDNVMAL 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 304 LGRGGFGKVY-----KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV G +VAVK LK + P ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 359 RGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS--------AR 408
+G C E+ LV Y+ GS+ D+ R I L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR-------------DYLPRHSIGLAQLLLFAQQICE 128
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
G++YLH IHR++ A N+LLD + +GDFGLAK + + H VR
Sbjct: 129 GMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSP 183
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ APE L K +DV+ +G+ L EL+T
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEM--- 346
+AT + +G G +G VYK R G VA LK R P GE L T E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVA---LKSVRVPNGEEGLPISTVREVALL 57
Query: 347 --ISMAVHRNLLRLRGFCMTP-TER----LLVYPYMANGSVASCLRERPPSQLPLDWPTR 399
+ H N++RL C T T+R LV+ ++ + + + L + PP LP + T
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--TI 114
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 459
K + RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPV 171
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ-------------RAFDLARL 506
V T+ + APE L + D++ G + E+ + + FDL L
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 229
Query: 507 ANDDD 511
+DD
Sbjct: 230 PPEDD 234
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 125
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAV 351
+D + ILG GG +V+ R L D VAVK L+ + R P L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 352 HRNLLRL--RGFCMTPTERLLVYPYMANGSV-ASCLRERPPSQLPLDWPTRKRIALGSAR 408
H ++ + G TP L PY+ V LR+ ++ P+ + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 466
L++ H + IIHRDVK ANIL+ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 140
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F K LG G F +V A G L AVK + ++ G E + E+ ++ H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
L +P LV ++ G + + E+ D T R L + + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEK-GFYTEKDASTLIRQVLDA---VYYLHRM 139
Query: 417 CDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
I+HRD+K N+L DEE + ++ DFGL+K M+ K ++TA GT G++APE L
Sbjct: 140 G---IVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTAC-GTPGYVAPEVL 194
Query: 474 STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ S+ D + G++ L+ G F
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 304 LGRGGFGKVYKGR--LADGSLVAVKRLK----EERTPGGELQFQTEVEMISMAVHRNLLR 357
+G G +GKV+K R G VA+KR++ EE P ++ + + H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 358 LRGFCMTP-----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L C T+ LV+ ++ + + + L + P +P + T K + RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE--TIKDMMFQLLRGLDF 135
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH H +++HRD+K NIL+ + + DFGLA++ ++ T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEV 190
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF----DLARLANDDDVMLL----DW 517
L + D++ G + E+ + F D+ +L DV+ L DW
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 140
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 120
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 304 LGRGGFGKVY-----KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G FGKV G +VAVK LK + P ++ E++++ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 359 RGFC--MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS--------AR 408
+G C LV Y+ GS+ D+ R I L
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLR-------------DYLPRHSIGLAQLLLFAQQICE 145
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
G++YLH IHRD+ A N+LLD + +GDFGLAK + + H VR
Sbjct: 146 GMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEXYRVREDGDSP 200
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ APE L K +DV+ +G+ L EL+T
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 131
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAV 351
+D + ILG GG +V+ R L D VAVK L+ + R P L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 352 HRNLLRL--RGFCMTPTERLLVYPYMANGSV-ASCLRERPPSQLPLDWPTRKRIALGSAR 408
H ++ + G TP L PY+ V LR+ ++ P+ + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 466
L++ H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 364 TPTERLLVYPYMANGSVASCLRE---RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
++ YMANG + + LRE R +Q L+ + + YL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLE---SKQ 125
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 481 KTDVFGYGIMLLELIT 496
K+D++ +G+++ E+ +
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAV 351
+D + ILG GG +V+ R L D VAVK L+ + R P L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 352 HRNLLRL--RGFCMTPTERLLVYPYMANGSV-ASCLRERPPSQLPLDWPTRKRIALGSAR 408
H ++ + G TP L PY+ V LR+ ++ P+ + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 466
L++ H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 304 LGRGGFGKVYK-GRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRL--R 359
+G G +G+ K R +DG ++ K L E Q +EV ++ H N++R R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD- 418
T T +V Y G +AS + + + LD R+ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 419 -PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++HRD+K AN+ LD + +GDFGLA+++++ + V GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMS 192
Query: 478 SSEKTDVFGYGIMLLEL 494
+EK+D++ G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + D L VAVK LK + +E++++S + H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL-------------------PLDWP 397
L G C L++ Y G + + LR + + L PL+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTH 456
+ A+G+++L IHRDV A N+LL A +GDFGLA+ +M+ +
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + D L VAVK LK + +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLD---------WPTRKRIALGS- 406
L G C L++ Y G + + LR R L D TR + S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 407 -ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGT 464
A+G+++L IHRDV A N+LL A +GDFGLA+ +M+ + V R
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ +APE + + ++DV+ YGI+L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVE--M 346
++++ + F +LG+G FGKV+ A+K LK++ + T VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 347 ISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
+S+A L FC T+ V Y+ G + ++ S D A
Sbjct: 72 LSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAA 126
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
GL +LH I++RD+K NILLD++ + DFG+ K D T GT
Sbjct: 127 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGT 182
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+IAPE L K + D + +G++L E++ GQ F
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEM 346
L+E + + ++G+G FG+VY GR VA++ + ER +L+ F+ EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMA 82
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
H N++ G CM+P ++ ++ S +R+ +++ LD ++IA
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEI 139
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---- 462
+G+ YLH I+H+D+K+ N+ D + V+ DFGL + + V A R
Sbjct: 140 VKGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDFGL-----FSISGVLQAGRREDK 190
Query: 463 -----GTIGHIAPEYLSTGKS---------SEKTDVFGYGIMLLEL 494
G + H+APE + S+ +DVF G + EL
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + D L VAVK LK + +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLD---------WPTRKRIALGS- 406
L G C L++ Y G + + LR R L D TR + S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 407 -ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGT 464
A+G+++L IHRDV A N+LL A +GDFGLA+ +M+ + V R
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
+ +APE + + ++DV+ YGI+L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 131
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 186
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 131
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 186
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 41/235 (17%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISM 349
L+ A+D F +LG+G FG+V K R A D A+K+++ + +EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVMLLAS 58
Query: 350 AVHRNLLRL-------RGFC--MTPTER----LLVYPYMANGSVASCLR-ERPPSQLPLD 395
H+ ++R R F MT ++ + Y N ++ + E Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 396 WPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK------- 448
W ++I LSY+H IIHRD+K NI +DE +GDFGLAK
Sbjct: 119 WRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 449 --LMDYKDT-----HVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGIMLLELI 495
+D ++ ++T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 280 LGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERT 333
+ Q K+ L+E+ ++ F + LG FGKVYKG L VA+K LK++
Sbjct: 12 INQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 334 PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPS--- 390
+F+ E + + H N++ L G +++ Y ++G + L R P
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 391 ---------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV 441
+ L+ P + A G+ YL H ++H+D+ N+L+ ++ +
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186
Query: 442 GDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
D GL + + D + + I +APE + GK S +D++ YG++L E+ +
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 93
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 150
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 151 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 205
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 131
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 186
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 82
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 139
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 140 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 194
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 75
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 132
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 133 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 187
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGEL--QFQTEVEMIS 348
+V + + LG G FGKV G G VAVK L ++ ++ + + E++ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPPSQLPLDWPTRKRIALGS 406
+ H ++++L TPT+ +V Y++ G + C R ++ +R+
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR------VEEMEARRLFQQI 120
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
+ Y H H ++HRD+K N+LLD A + DFGL+ +M D G+
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPN 175
Query: 467 HIAPEYLSTGK--SSEKTDVFGYGIMLLELITGQRAFD 502
+ APE +S G+ + + D++ G++L L+ G FD
Sbjct: 176 YAAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVE--M 346
++++ + F +LG+G FGKV+ A+K LK++ + T VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 347 ISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
+S+A L FC T+ V Y+ G + ++ S D A
Sbjct: 71 LSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFYAA 125
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
GL +LH I++RD+K NILLD++ + DFG+ K D T GT
Sbjct: 126 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGT 181
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+IAPE L K + D + +G++L E++ GQ F
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 143
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 144 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 198
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 78
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 135
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 136 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 190
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLA--DGSLV--AVKRLKEERTPGGELQ-FQ 341
L ++ + F+ +LG+G FG V + +L DGS V AVK LK + +++ F
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 342 TEVEMISMAVHRNLLRLRGFCMTPTER------LLVYPYMANGSVASCLRERPPSQLPLD 395
E + H ++ +L G + + +++ P+M +G + + L + P +
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 396 WP--TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453
P T R + A G+ YL IHRD+ A N +L E+ V DFGL++ +
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 454 DTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
D + A + + +A E L+ + +DV+ +G+ + E++T GQ +
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 87
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 144
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 145 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 199
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + +M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 131
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 186
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 34/245 (13%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVK--RLKEERTPGGELQFQTEVEM--- 346
+AT + +G G +G VYK R G VA+K R+ GG L T E+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 347 --ISMAVHRNLLRLRGFCMTP-TER----LLVYPYMANGSVASCLRERPPSQLPLDWPTR 399
+ H N++RL C T T+R LV+ ++ + + + L + PP LP + T
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE--TI 122
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 459
K + RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+ T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALT 177
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ-------------RAFDLARL 506
V T+ + APE L + D++ G + E+ + + FDL L
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237
Query: 507 ANDDD 511
+DD
Sbjct: 238 PPEDD 242
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
+ D F LG+G FG VY R + A+K L + + G E Q + E+E+ S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LR+ + L+ + G + L++ D A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELAD 126
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
L Y H+ K+IHRD+K N+L+ + E + DFG + H + R GT
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 176
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ ++ PE + EK D++ G++ E + G FD
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 143
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 144 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 198
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 79
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 136
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 137 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 191
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXXXX 150
+ +L++ N ++G IP ++G++ L L+L N +G IPD +G
Sbjct: 631 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 690
Query: 151 GPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCG 199
G IP +++ ++ L +DLSNN LSG +P+ G F F P F NN LCG
Sbjct: 691 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 89 KNLQYLELYSNNITGPIPSDL-GNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXX 147
K+LQYL L N TG IP L G +L LDL N F G +P G
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 325
Query: 148 XXXGPIPM-SLTNISSLQVLDLSNNRLSGVVPD---NGSFSLFTPISFANNLDLCGPVTG 203
G +PM +L + L+VLDLS N SG +P+ N S SL T +NN GP+
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS--GPILP 383
Query: 204 RPC 206
C
Sbjct: 384 NLC 386
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%)
Query: 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXXXX 150
LQ L L +N TG IP L N + LVSL L N +G IP +LG
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 151 GPIPMSLTNISSLQVLDLSNNRLSGVVP 178
G IP L + +L+ L L N L+G +P
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIP 480
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%)
Query: 89 KNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXX 148
K L+ L L N++TG IPS L N T+L + L N TG IP +G
Sbjct: 463 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 522
Query: 149 XXGPIPMSLTNISSLQVLDLSNNRLSGVVP 178
G IP L + SL LDL+ N +G +P
Sbjct: 523 FSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYL--NSFTGPIPDTLGXXXXXXXXXXXXXX 148
L L+L SNN +GPI +L +LYL N FTG IP TL
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 149 XXGPIPMSLTNISSLQVLDLSNNRLSGVVP 178
G IP SL ++S L+ L L N L G +P
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 90 NLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXXX 149
NL++L++ SNN + IP LG+ ++L LD+ N +G +
Sbjct: 198 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 150 XGPIPMSLTNISSLQVLDLSNNRLSGVVPD 179
GPIP + SLQ L L+ N+ +G +PD
Sbjct: 257 VGPIPP--LPLKSLQYLSLAENKFTGEIPD 284
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 89 KNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD 131
+ L L+L SN + G IP + LT L +DL N+ +GPIP+
Sbjct: 677 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 41 NVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAAXXXXXXXXXXXXKNLQYLE---LY 97
N+L W NPCT+ VTC +D V +DL + +L LE L
Sbjct: 25 NLLPDWSSN-KNPCTFDGVTCRDD-KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 82
Query: 98 SNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD--TLGXXXXXXXXXXXXXXXXGPIPM 155
+++I G + S SL SLDL NS +GP+ +LG P +
Sbjct: 83 NSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 141
Query: 156 SLT-NISSLQVLDLSNNRLSGV 176
S ++SL+VLDLS N +SG
Sbjct: 142 SGGLKLNSLEVLDLSANSISGA 163
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
+ D F LG+G FG VY R + A+K L + + G E Q + E+E+ S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LR+ + L+ + G + L++ D A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELAD 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
L Y H+ K+IHRD+K N+L+ + E + DFG + H + R GT
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ ++ PE + EK D++ G++ E + G FD
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 117/298 (39%), Gaps = 48/298 (16%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
D + + ++G G V A VA+KR+ E+ + E++ +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLR----ERPPSQLPLDWPTRKRIALGSARGL 410
++ + E LV ++ GSV ++ + LD T I GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIG 466
YLH + IHRDVKA NILL E+ + DFG++ + D V GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 467 HIAPEYLSTGKSSE-KTDVFGYGIMLLELITGQRAFD--------LARLANDDDVMLLDW 517
+APE + + + K D++ +GI +EL TG + + L ND
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND-------- 243
Query: 518 VXXXXXXXXXXXXVDPDLQNNYVEAEV-----EQLIQVALLCTQGSPMDRPKMSEVVR 570
P L+ + E+ + ++ LC Q P RP +E++R
Sbjct: 244 --------------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLV-AVKRLKEER--TPGGELQFQTEVEMIS 348
+ D F LG+G FG VY R + A+K L + + G E Q + E+E+ S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LR+ + L+ + G + L++ D A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELAD 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
L Y H+ K+IHRD+K N+L+ + E + DFG + H + R GT
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+ ++ PE + EK D++ G++ E + G FD
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 117/298 (39%), Gaps = 48/298 (16%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
D + + ++G G V A VA+KR+ E+ + E++ +S H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLR----ERPPSQLPLDWPTRKRIALGSARGL 410
++ + E LV ++ GSV ++ + LD T I GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIG 466
YLH + IHRDVKA NILL E+ + DFG++ + D V GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 467 HIAPEYLSTGKSSE-KTDVFGYGIMLLELITGQRAFD--------LARLANDDDVMLLDW 517
+APE + + + K D++ +GI +EL TG + + L ND
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND-------- 238
Query: 518 VXXXXXXXXXXXXVDPDLQNNYVEAEV-----EQLIQVALLCTQGSPMDRPKMSEVVR 570
P L+ + E+ + ++ LC Q P RP +E++R
Sbjct: 239 --------------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 165
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 166 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 220
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 102
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 159
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 160 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 214
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGEL--QFQTEVEMIS 348
+V + + LG G FGKV G G VAVK L ++ ++ + + E++ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPPSQLPLDWPTRKRIALGS 406
+ H ++++L TPT+ +V Y++ G + C R ++ +R+
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR------VEEMEARRLFQQI 120
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
+ Y H H ++HRD+K N+LLD A + DFGL+ +M D G+
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPN 175
Query: 467 HIAPEYLSTGK--SSEKTDVFGYGIMLLELITGQRAFD 502
+ APE +S G+ + + D++ G++L L+ G FD
Sbjct: 176 YAAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 165
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 166 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 220
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 280 LGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPG 335
LG ++ ++ + D + +++LG G F +V LA+ LVA+K + +E G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEG 58
Query: 336 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLD 395
E + E+ ++ H N++ L + L+ ++ G + + E+
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------- 111
Query: 396 WPTRK---RIALGSARGLSYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKL 449
+ T + R+ + YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
D V + GT G++APE L+ S+ D + G++ L+ G F
Sbjct: 169 ED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXXXX 150
+ +L++ N ++G IP ++G++ L L+L N +G IPD +G
Sbjct: 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693
Query: 151 GPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCG 199
G IP +++ ++ L +DLSNN LSG +P+ G F F P F NN LCG
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 89 KNLQYLELYSNNITGPIPSDL-GNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXX 147
K+LQYL L N TG IP L G +L LDL N F G +P G
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328
Query: 148 XXXGPIPM-SLTNISSLQVLDLSNNRLSGVVPD---NGSFSLFTPISFANNLDLCGPVTG 203
G +PM +L + L+VLDLS N SG +P+ N S SL T +NN GP+
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS--GPILP 386
Query: 204 RPC 206
C
Sbjct: 387 NLC 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%)
Query: 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXXXX 150
LQ L L +N TG IP L N + LVSL L N +G IP +LG
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 151 GPIPMSLTNISSLQVLDLSNNRLSGVVP 178
G IP L + +L+ L L N L+G +P
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIP 483
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%)
Query: 89 KNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXX 148
K L+ L L N++TG IPS L N T+L + L N TG IP +G
Sbjct: 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525
Query: 149 XXGPIPMSLTNISSLQVLDLSNNRLSGVVP 178
G IP L + SL LDL+ N +G +P
Sbjct: 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYL--NSFTGPIPDTLGXXXXXXXXXXXXXX 148
L L+L SNN +GPI +L +LYL N FTG IP TL
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 149 XXGPIPMSLTNISSLQVLDLSNNRLSGVVP 178
G IP SL ++S L+ L L N L G +P
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 90 NLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGXXXXXXXXXXXXXXX 149
NL++L++ SNN + IP LG+ ++L LD+ N +G +
Sbjct: 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 150 XGPIPMSLTNISSLQVLDLSNNRLSGVVPD 179
GPIP + SLQ L L+ N+ +G +PD
Sbjct: 260 VGPIPP--LPLKSLQYLSLAENKFTGEIPD 287
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 89 KNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD 131
+ L L+L SN + G IP + LT L +DL N+ +GPIP+
Sbjct: 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 41 NVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAAXXXXXXXXXXXXKNLQYLE---LY 97
N+L W NPCT+ VTC +D V +DL + +L LE L
Sbjct: 28 NLLPDWSSN-KNPCTFDGVTCRDD-KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85
Query: 98 SNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD--TLGXXXXXXXXXXXXXXXXGPIPM 155
+++I G + S SL SLDL NS +GP+ +LG P +
Sbjct: 86 NSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 144
Query: 156 SLT-NISSLQVLDLSNNRLSGV 176
S ++SL+VLDLS N +SG
Sbjct: 145 SGGLKLNSLEVLDLSANSISGA 166
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 110
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 167
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 168 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 222
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 112
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 169
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 170 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 224
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRN 354
S+++ ++G G FG VY+ +L D G LVA+K+ L+++R ELQ +++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 153
Query: 355 LLRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGS 406
++RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQL 210
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 211 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 265
Query: 466 GHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 72 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 124
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 280 LGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPG 335
LG ++ ++ + D + +++LG G F +V LA+ LVA+K + +E G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEG 58
Query: 336 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLD 395
E + E+ ++ H N++ L + L+ ++ G + + E+
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------- 111
Query: 396 WPTRK---RIALGSARGLSYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKL 449
+ T + R+ + YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
D V + GT G++APE L+ S+ D + G++ L+ G F
Sbjct: 169 ED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 303 ILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISM--AVHRNLLRLR 359
+ RG FG V+K +L + VAVK P + Q +Q E E+ S+ H N+L+
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIF-----PIQDKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 360 GFCMTPT----ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH- 414
G T + L+ + GS++ L+ S W IA ARGL+YLH
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS-----WNELCHIAETMARGLAYLHE 139
Query: 415 ------DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGH 467
D P I HRD+K+ N+LL A + DFGLA K K T GT +
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 468 IAPEYLSTGKSSE-----KTDVFGYGIMLLELITGQRAFD 502
+APE L + + + D++ G++L EL + A D
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 126
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G +G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 36/224 (16%)
Query: 302 NILGRGGFGKVYKGRLADGSLVAVK--RLKEERTPGGELQFQTEVEMISM--AVHRNLLR 357
I RG FG V+K +L + VAVK L+++++ +Q+E E+ S H NLL+
Sbjct: 21 EIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQS------WQSEREIFSTPGMKHENLLQ 73
Query: 358 L-----RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
RG + E L+ + GS+ L+ + W +A +RGLSY
Sbjct: 74 FIAAEKRGSNLE-VELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSY 127
Query: 413 LHDHC--------DPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRG 463
LH+ P I HRD K+ N+LL + AV+ DFGLA + K T G
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVG 187
Query: 464 TIGHIAPEYLSTGKSSE-----KTDVFGYGIMLLELITGQRAFD 502
T ++APE L + + + D++ G++L EL++ +A D
Sbjct: 188 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
LG G +G VYK G +VA+K++ E +LQ E+ ++ ++++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
T+ +V Y GSV+ +R R + + T I + +GL YLH +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLEYLHFM---RK 146
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
IHRD+KA NILL+ E A + DFG+A +L D V GT +APE + +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIGYNC 204
Query: 481 KTDVFGYGIMLLELITGQ 498
D++ GI +E+ G+
Sbjct: 205 VADIWSLGITAIEMAEGK 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 280 LGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPG 335
LG ++ ++ + D + +++LG G F +V LA+ LVA+K + +E G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEG 58
Query: 336 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLD 395
E + E+ ++ H N++ L + L+ ++ G + + E+
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------- 111
Query: 396 WPTRK---RIALGSARGLSYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKL 449
+ T + R+ + YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
D V + GT G++APE L+ S+ D + G++ L+ G F
Sbjct: 169 ED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 301 KNILGRGGFGKV-----YKGRLADGSLVAVKRLKEERTPGGELQFQTEVEM--ISMAVHR 353
+ LG G FGKV YK + VA+K + + ++ + E E+ + + H
Sbjct: 14 RETLGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
++++L TPT+ ++V Y A G + + E+ + +R + Y
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYC 124
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H KI+HRD+K N+LLD+ + DFGL+ +M D + G+ + APE +
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 179
Query: 474 STGK--SSEKTDVFGYGIMLLELITGQRAFD 502
+ GK + + DV+ GI+L ++ G+ FD
Sbjct: 180 N-GKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 304 LGRGGFGK-VYKGRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G G FGK + DG +K + R E + + EV +++ H N+++ R
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLP----LDWPTRKRIALGSARGLSYLHDHC 417
+V Y G + + + LDW + +AL ++HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHDR- 144
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
KI+HRD+K+ NI L ++ +GDFG+A++++ + A GT +++PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENKP 201
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARLAN 508
+ K+D++ G +L EL T + AF+ + N
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKN 232
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAV 351
+D + ILG GG +V+ R L VAVK L+ + R P L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 352 HRNLLRL--RGFCMTPTERLLVYPYMANGSV-ASCLRERPPSQLPLDWPTRKRIALGSAR 408
H ++ + G TP L PY+ V LR+ ++ P+ + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 466
L++ H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVY-KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMA 350
+V F+ +LG+G FGKV R L A+K LK++ + T VE +A
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 351 VHRN---LLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
+ L +L C +RL V Y+ G + +++ + P I++G
Sbjct: 75 LLDKPPFLTQLHS-CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG- 132
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L +LH II+RD+K N++LD E + DFG+ K D T GT
Sbjct: 133 ---LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDGVTTREFCGTPD 185
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
+IAPE ++ + D + YG++L E++ GQ FD
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAV 351
+D + ILG GG +V+ R L VAVK L+ + R P L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 352 HRNLLRL--RGFCMTPTERLLVYPYMANGSV-ASCLRERPPSQLPLDWPTRKRIALGSAR 408
H ++ + G TP L PY+ V LR+ ++ P+ + + +
Sbjct: 71 HPAIVAVYATGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 466
L++ H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 131/297 (44%), Gaps = 62/297 (20%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F ++G GGFG+V+K + DG +KR+K + EV+ ++ H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-----EREVKALAKLDHVNIV 67
Query: 357 RLRG----FCMTP-----------TERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRK 400
G F P T+ L + + G++ + +R +L K
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD------K 121
Query: 401 RIAL----GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 456
+AL +G+ Y+H K+I+RD+K +NI L + + +GDFGL + K+
Sbjct: 122 VLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDG 176
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI-TGQRAFDLARLANDDDVMLL 515
+GT+ +++PE +S+ ++ D++ G++L EL+ AF+ ++ D L
Sbjct: 177 KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD----LR 232
Query: 516 DWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
D + ++ + + + L+Q L P DRP SE++R L
Sbjct: 233 DGII-----------------SDIFDKKEKTLLQKLL---SKKPEDRPNTSEILRTL 269
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEE--RTPGGELQFQTEVEMISMAV 351
+D + ILG GG +V+ R L VAVK L+ + R P L+F+ E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 352 HRNLLRL--RGFCMTPTERLLVYPYMANGSV-ASCLRERPPSQLPLDWPTRKRIALGSAR 408
H ++ + G TP L PY+ V LR+ ++ P+ + + +
Sbjct: 88 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 466
L++ H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+++PE ++DV+ G +L E++TG+ F
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GLS+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLSFC 119
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G+G G VY +A G VA++++ ++ P EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V Y+A GS+ + E +D + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ NILL + + DFG + + + +T V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 75/310 (24%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
F ++G GGFG+V+K + DG ++R+K + EV+ ++ H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-----EREVKALAKLDHVNIV 68
Query: 357 RLRG----FCMTP------------------------TERLLV-YPYMANGSVASCLRER 387
G F P T+ L + + G++ + +R
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 388 PPSQLPLDWPTRKRIAL----GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 443
+L K +AL +G+ Y+H K+IHRD+K +NI L + + +GD
Sbjct: 129 RGEKLD------KVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 444 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI-TGQRAFD 502
FGL + K+ T +GT+ +++PE +S+ ++ D++ G++L EL+ AF+
Sbjct: 180 FGLVTSL--KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 237
Query: 503 LARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDR 562
++ D L D + ++ + + + L+Q L P DR
Sbjct: 238 TSKFFTD----LRDGII-----------------SDIFDKKEKTLLQKLL---SKKPEDR 273
Query: 563 PKMSEVVRML 572
P SE++R L
Sbjct: 274 PNTSEILRTL 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGS-LVAVKRLKEER--TPGGELQFQTEVEMIS 348
D F LG+G FG VY R +VA+K L + + G E Q + E+E+ +
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+LRL + L+ Y G + L++ D I A
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK----SCTFDEQRTATIMEELAD 134
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 464
L Y H K+IHRD+K N+LL + E + DFG + H + R GT
Sbjct: 135 ALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKTMCGT 184
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLA 504
+ ++ PE + +EK D++ G++ EL+ G F+ A
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
S+++ ++G G FG VY+ +L D G LVA+K++ + G+ E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 356 LRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
+RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIY--VKLYMYQLF 132
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIG 466
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 467 HIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 29/235 (12%)
Query: 281 GQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTP 334
G+LK SL ++ + LG FGKVYKG L VA+K LK++
Sbjct: 1 GKLKEISLSAVRFMEE-------LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG 53
Query: 335 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPS---- 390
+F+ E + + H N++ L G +++ Y ++G + L R P
Sbjct: 54 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 391 --------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442
+ L+ P + A G+ YL H ++H+D+ N+L+ ++ +
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKIS 170
Query: 443 DFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
D GL + + D + + I +APE + GK S +D++ YG++L E+ +
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 302 NILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLL 356
+LG+G FGKV+ R G L A+K LK+ ++ + E ++++ H ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+L T + L+ ++ G + + R ++ K A GL +LH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFT----RLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLST 475
II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++APE ++
Sbjct: 150 G---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMAPEVVNR 204
Query: 476 GKSSEKTDVFGYGIMLLELITGQRAF 501
S D + YG+++ E++TG F
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 302 NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNL--LR 357
LG+GGF K Y+ D V ++ P L Q E +A+H++L
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
+ GF + VY + S L E + + P + + +G+ YLH++
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKTLCGTPNYIAPEVLCKKG 218
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARL 506
S + D++ G +L L+ G+ F+ + L
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 302 NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNL--LR 357
LG+GGF K Y+ D V ++ P L Q E +A+H++L
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
+ GF + VY + S L E + + P + + +G+ YLH++
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNYIAPEVLCKKG 218
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARL 506
S + D++ G +L L+ G+ F+ + L
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMA 350
V ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H N+++L T + LV+ ++ + + + + +PL P K +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 120
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
++ H H +++HRD+K N+L++ E + DFGLA+ T V T+ + AP
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAP 176
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 304 LGRGGFGKVYKG--RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG G G+V R+ + + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
+ L Y + G L +R + + P +R G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGI 125
Query: 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-SS 479
HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 480 EKTDVFGYGIMLLELITGQRAFD 502
E DV+ GI+L ++ G+ +D
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ--FQTEVEMISMAVHRNLLRLRG 360
LG G FGKV G VA+K + ++ ++Q + E+ + + H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E ++V Y N ++ S+ +R + Y H H K
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISAVEYCHRH---K 123
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK--S 478
I+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +S GK +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS-GKLYA 180
Query: 479 SEKTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L ++ + FD
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 36/285 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMIS 348
+A + ILG G FG+VY+G + VAVK K++ T + +F +E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 349 MAVHRNLLRLRGFCMT-PTERLL-VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
H ++++L G PT ++ +YPY G + L ER + L + T +L
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPY---GELGHYL-ERNKNSLKV--LTLVLYSLQI 118
Query: 407 ARGLSYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
+ ++YL +C +HRD+ NIL+ +GDFGL++ ++ +D + + R I
Sbjct: 119 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 524
++PE ++ + + +DV+ + + + E+++ G++ F L N D + +L+
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF--FWLENKDVIGVLE-------- 224
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 569
PDL L + C P DRP+ +E+V
Sbjct: 225 -KGDRLPKPDLCP-------PVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMISMAV 351
D + +++LG G F +V LA+ LVA+K + ++ G E + E+ ++
Sbjct: 18 DIYDFRDVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRK---RIALGSAR 408
H N++ L + L+ ++ G + + E+ + T + R+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-------GFYTERDASRLIFQVLD 127
Query: 409 GLSYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
+ YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+ D V + GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTP 182
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
G++APE L+ S+ D + G++ L+ G F
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 302 NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNL--LR 357
LG+GGF K Y+ D V ++ P L Q E +A+H++L
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
+ GF + VY + S L E + + P + + +G+ YLH++
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 145
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 146 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKKG 202
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARL 506
S + D++ G +L L+ G+ F+ + L
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETSCL 231
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
S+++ ++G G FG VY+ +L D G LVA+K++ + G+ E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 356 LRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
+RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQLF 132
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIG 466
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 187
Query: 467 HIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
+ H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 472 YLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
L K S D++ G + E++T + F
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 174
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ--FQTEVEMISMAVHRNLLRLRG 360
LG G FGKV G VA+K + ++ ++Q + E+ + + H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E ++V Y N ++ S+ +R + Y H H K
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISAVEYCHRH---K 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK--S 478
I+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +S GK +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS-GKLYA 190
Query: 479 SEKTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L ++ + FD
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLK----EERTPGGELQFQTEVEM 346
Q + + +G G +G VYK + + G +VA+KR++ +E P ++ E+ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---EISL 72
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
+ H N++ L + LV+ +M + L E ++ L K
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQL 128
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
RG+++ H H +I+HRD+K N+L++ + + DFGLA+ T V T+
Sbjct: 129 LRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLW 184
Query: 467 HIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ AP+ L + K S D++ G + E+ITG+ F
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ--FQTEVEMISMAVHRNLLRLRG 360
LG G FGKV G VA+K + ++ ++Q + E+ + + H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E ++V Y N ++ S+ +R + Y H H K
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISAVEYCHRH---K 132
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK--S 478
I+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +S GK +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS-GKLYA 189
Query: 479 SEKTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L ++ + FD
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 297 SFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
S+++ ++G G FG VY+ +L D G LVA+K++ + G+ E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 356 LRLRGFCMTPTERL------LVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
+RLR F + E+ LV Y+ +V R R LP+ + K
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY--VKLYMYQLF 132
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIG 466
R L+Y+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 187
Query: 467 HIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLK----EERTPGGELQFQTEVEM 346
Q + + +G G +G VYK + + G +VA+KR++ +E P ++ E+ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---EISL 72
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
+ H N++ L + LV+ +M + L E ++ L K
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQL 128
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
RG+++ H H +I+HRD+K N+L++ + + DFGLA+ T V T+
Sbjct: 129 LRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLW 184
Query: 467 HIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
+ AP+ L + K S D++ G + E+ITG+ F
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 304 LGRGGFGKV--YKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
LG GGF V +G L DG A+KR+ E + Q E +M + H N+LRL +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDRE-EAQREADMHRLFNHPNILRLVAY 94
Query: 362 CM----TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
C+ E L+ P+ G++ + + L + LG RGL +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-----------TAVRGTIG 466
HRD+K NILL +E + V+ D G M+ HV A R TI
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 467 HIAPEYLSTGKSS---EKTDVFGYGIMLLELITGQRAFDLARLAND 509
+ APE S E+TDV+ G +L ++ G+ +D+ D
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 302 NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL--QFQTEVEMISMAVHRNL--LR 357
LG+GGF K Y+ D V ++ P L Q E +A+H++L
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
+ GF + VY + S L E + + P + + +G+ YLH++
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKKG 218
Query: 478 SSEKTDVFGYGIMLLELITGQRAFDLARL 506
S + D++ G +L L+ G+ F+ + L
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ--FQTEVEMISMAVHRNLLRLRG 360
LG G FGKV G VA+K + ++ ++Q + E+ + + H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ E ++V Y N ++ S+ +R + Y H H K
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISAVEYCHRH---K 127
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK--S 478
I+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +S GK +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS-GKLYA 184
Query: 479 SEKTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L ++ + FD
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 126
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 126
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISM 349
+++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
++ G + E + +M GS+ L++ R P Q+ ++++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVI 114
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIG 466
+GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRS 168
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+++PE L S ++D++ G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISM 349
+++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
++ G + E + +M GS+ L++ R P Q+ ++++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVI 114
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIG 466
+GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRS 168
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+++PE L S ++D++ G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 36/285 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTPGGELQFQTEVEMIS 348
+A + ILG G FG+VY+G + VAVK K++ T + +F +E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 349 MAVHRNLLRLRGFCMT-PTERLL-VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
H ++++L G PT ++ +YPY G + L ER + L + T +L
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPY---GELGHYL-ERNKNSLKV--LTLVLYSLQI 134
Query: 407 ARGLSYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
+ ++YL +C +HRD+ NIL+ +GDFGL++ ++ +D + + R I
Sbjct: 135 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 524
++PE ++ + + +DV+ + + + E+++ G++ F L N D + +L+
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF--FWLENKDVIGVLE-------- 240
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 569
PDL L + C P DRP+ +E+V
Sbjct: 241 -KGDRLPKPDLCP-------PVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISM 349
+++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
++ G + E + +M GS+ L++ R P Q+ ++++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVI 114
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIG 466
+GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRS 168
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+++PE L S ++D++ G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISM 349
+++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
++ G + E + +M GS+ L++ R P Q+ ++++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVI 114
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIG 466
+GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRS 168
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+++PE L S ++D++ G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 36/285 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLADGSL----VAVKRLKEERTPGGELQFQTEVEMIS 348
+A + ILG G FG+VY+G + VAVK K++ T + +F +E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 349 MAVHRNLLRLRGFCMT-PTERLL-VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
H ++++L G PT ++ +YPY G + L ER + L + T +L
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPY---GELGHYL-ERNKNSLKV--LTLVLYSLQI 122
Query: 407 ARGLSYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
+ ++YL +C +HRD+ NIL+ +GDFGL++ ++ +D + + R I
Sbjct: 123 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 524
++PE ++ + + +DV+ + + + E+++ G++ F L N D + +L+
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF--FWLENKDVIGVLE-------- 228
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 569
PDL L + C P DRP+ +E+V
Sbjct: 229 -KGDRLPKPDLCP-------PVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 26/226 (11%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEM 346
L E D ++ +LG+G +G VY GR L++ +A+K + E R E+ +
Sbjct: 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIAL 72
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMAN---GSVASCLRER----PPSQLPLDWPTR 399
H+N+++ G + +E + +M GS+++ LR + ++ + + T+
Sbjct: 73 HKHLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV--VGDFGLAKLMDYKDTHV 457
+ + GL YLHD+ +I+HRD+K N+L++ + V + DFG +K + +
Sbjct: 130 QIL-----EGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-C 179
Query: 458 TTAVRGTIGHIAPEYLSTGKS--SEKTDVFGYGIMLLELITGQRAF 501
T GT+ ++APE + G + D++ G ++E+ TG+ F
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISM 349
+++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSA 407
++ G + E + +M GS+ L++ R P Q+ ++++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVI 114
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIG 466
+GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRS 168
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+++PE L S ++D++ G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + + +PL P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 22/242 (9%)
Query: 278 VHLGQL-------KRFSLRELQ--------VATDSFSNKNILGRGGFGKVYKGRL-ADGS 321
HLGQ ++ LR LQ + D F + +LGRGGFG+V+ ++ A G
Sbjct: 152 AHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGK 211
Query: 322 LVAVKRLKEERTPG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 379
L A K+L ++R G E ++++ R ++ L T T+ LV M G
Sbjct: 212 LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGD 271
Query: 380 VASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEA 439
+ + P GL +LH II+RD+K N+LLD++
Sbjct: 272 IRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNV 328
Query: 440 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 499
+ D GLA + T T GT G +APE L + D F G+ L E+I +
Sbjct: 329 RISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 500 AF 501
F
Sbjct: 388 PF 389
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAVK + + + LQ EV ++ + H N+++L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L + W K A R + +C K
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL-------VAHGWMKEKE-ARAKFRQIVSAVQYCHQKF 126
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + T G+ + APE L GK +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYD 183
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + + +PL P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 26/224 (11%)
Query: 290 ELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMIS 348
E D ++ +LG+G +G VY GR L++ +A+K + E R E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHK 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMAN---GSVASCLRER----PPSQLPLDWPTRKR 401
H+N+++ G + +E + +M GS+++ LR + ++ + + T++
Sbjct: 61 HLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 117
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV--VGDFGLAKLMDYKDTHVTT 459
+ GL YLHD+ +I+HRD+K N+L++ + V + DFG +K + + T
Sbjct: 118 L-----EGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTE 167
Query: 460 AVRGTIGHIAPEYLSTGKS--SEKTDVFGYGIMLLELITGQRAF 501
GT+ ++APE + G + D++ G ++E+ TG+ F
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQT-EVEMISMAVHRNLLRLRGFC 362
+G G +G VYK + G A+K+++ E+ G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
T +LV+ ++ + + L + L+ T K L G++Y HD +++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL-STGKSSEK 481
HRD+K N+L++ E E + DFGLA+ T V T+ + AP+ L + K S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 482 TDVFGYGIMLLELITGQRAF 501
D++ G + E++ G F
Sbjct: 182 IDIWSVGCIFAEMVNGAPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQT-EVEMISMAVHRNLLRLRGFC 362
+G G +G VYK + G A+K+++ E+ G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
T +LV+ ++ + + L + L+ T K L G++Y HD +++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL-STGKSSEK 481
HRD+K N+L++ E E + DFGLA+ T V T+ + AP+ L + K S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 482 TDVFGYGIMLLELITGQRAF 501
D++ G + E++ G F
Sbjct: 182 IDIWSVGCIFAEMVNGTPLF 201
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G+G G VY +A G VA++++ ++ P EL E+ ++ + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V Y+A GS+ + E +D + + L +LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HR++K+ NILL + + DFG + + + +T V GT +APE ++ K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G +G+V++G L G VAVK ++E++ E TE+ + H N+L
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE----TEIYNTVLLRHDNILGFIAS 70
Query: 362 CMTP----TERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGSARGLSYLH-- 414
MT T+ L+ Y +GS+ L R+ L L R+A+ +A GL++LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLAL------RLAVSAACGLAHLHVE 124
Query: 415 ---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIGH 467
P I HRD K+ N+L+ + + D GLA + DY D V GT +
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRY 183
Query: 468 IAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
+APE L +S + TD++ +G++L E+
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G+G G VY +A G VA++++ ++ P EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V Y+A GS+ + E +D + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ NILL + + DFG + + + + V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 20/242 (8%)
Query: 261 RKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADG 320
+K +E D + E L Q ++ ++ D F + LG G G V+K
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQKVG----ELKDDDFEKISELGAGNGGVVFKVSHKPS 57
Query: 321 SLVAVKRLKE-ERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 379
LV ++L E P Q E++++ ++ G + E + +M GS
Sbjct: 58 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117
Query: 380 VASCLRE--RPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF 437
+ L++ R P Q+ ++++ +GL+YL + KI+HRDVK +NIL++
Sbjct: 118 LDQVLKKAGRIPEQI------LGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 169
Query: 438 EAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 496
E + DFG++ +L+D + + GT +++PE L S ++D++ G+ L+E+
Sbjct: 170 EIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 225
Query: 497 GQ 498
G+
Sbjct: 226 GR 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 304 LGRGGFGKVYKG--RLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRG 360
LG G FG V +G R+ + VA+K LK+ + E +++ + ++RL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
C E L++ MA G ++P+ + + G+ YL +
Sbjct: 78 VCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEK---N 130
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIAPEYLSTGKS 478
+HRD+ A N+LL A + DFGL+K + D++ T G + APE ++ K
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 479 SEKTDVFGYGIMLLELIT-GQRAF 501
S ++DV+ YG+ + E ++ GQ+ +
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G+G G VY +A G VA++++ ++ P EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V Y+A GS+ + E +D + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ NILL + + DFG + + + + V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 297 SFSNKNILGRGGFGKVY--KGRLADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
+F +LG G F +V+ K RL G L A+K +K ++P + + E+ ++ H
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHE 66
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS-- 411
N++ L + T LV ++ G + + ER T K +L + LS
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY-------TEKDASLVIQQVLSAV 119
Query: 412 -YLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
YLH++ I+HRD+K N+L +E + ++ DFGL+K+ + + + GT G+
Sbjct: 120 KYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGY 173
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE L+ S+ D + G++ L+ G F
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 41/235 (17%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISM 349
L+ A+D F +LG+G FG+V K R A D A+K+++ T +EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVXLLAS 58
Query: 350 AVHRNLLRL-------RGFCMTPTE------RLLVYPYMANGSVASCLR-ERPPSQLPLD 395
H+ ++R R F T + Y N ++ + E Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 396 WPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK------- 448
W ++I LSY+H IIHR++K NI +DE +GDFGLAK
Sbjct: 119 WRLFRQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 449 --LMDYKD-----THVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGIMLLELI 495
+D ++ ++T+A+ GT ++A E L TG +EK D + GI+ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMA 350
++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSAR 408
++ G + E + +M GS+ L++ R P Q+ ++++ +
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVIK 177
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGH 467
GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 178 GLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 231
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
++PE L S ++D++ G+ L+E+ G+
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEY 472
H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 473 LSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
L K S D++ G + E++T + F
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEY 472
H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 473 LSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
L K S D++ G + E++T + F
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G+G G VY +A G VA++++ ++ P EL E+ ++ + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V Y+A GS+ + E +D + + L +LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ NILL + + DFG + + + + V GT +APE ++ K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 121
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQT-EVEMISMAVHRNLLRLRGFC 362
+G G +G VYK + G A+K+++ E+ G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
T +LV+ ++ + + L + L+ T K L G++Y HD +++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL-STGKSSEK 481
HRD+K N+L++ E E + DFGLA+ T + T+ + AP+ L + K S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 482 TDVFGYGIMLLELITGQRAF 501
D++ G + E++ G F
Sbjct: 182 IDIWSVGCIFAEMVNGTPLF 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ +++ + + + +PL P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ +++ + + + +PL P K +GL+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ +++ + + + +PL P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+K+++ + T G E+ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 120
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEY 472
H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 175
Query: 473 LSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
L K S D++ G + E++T + F
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ +++ + + + +PL P K +GL+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMA 350
++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSAR 408
++ G + E + +M GS+ L++ R P Q+ ++++ +
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVIK 118
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGH 467
GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + GT +
Sbjct: 119 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSY 172
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
++PE L S ++D++ G+ L+E+ G+
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
+ D F + +LGRGGFG+V+ ++ A G L A K+L ++R G E ++++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
R ++ L T T+ LV M G + + P G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L +LH II+RD+K N+LLD++ + D GLA + T T GT G +A
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMA 357
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE L + D F G+ L E+I + F
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+ +++ + T G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHR 353
++F +G G +G VYK R G +VA+ +++ + T G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++L T + LV+ ++ + + + + +PL P K +GL++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 474 STGK-SSEKTDVFGYGIMLLELITGQRAF 501
K S D++ G + E++T + F
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQT-EVEMISMAV 351
+ + + N ++G G +G V K R D G +VA+K+ E + E++++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H NL+ L C LV+ ++ + ++ L P LD+ ++ G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFV-DHTILDDLELFPNG---LDYQVVQKYLFQIINGIG 138
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----YKDTHVTTAVRGTIG 466
+ H H IIHRD+K NIL+ + + DFG A+ + Y D T R
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR---- 191
Query: 467 HIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L K + DV+ G ++ E+ G+ F
Sbjct: 192 --APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMA 350
++ D F + LG G G V K + L+ ++L E P Q E++++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSAR 408
++ G + E + +M GS+ L+E R P ++ ++++ R
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI------LGKVSIAVLR 125
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGH 467
GL+YL + +I+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 126 GLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 179
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+APE L S ++D++ G+ L+EL G+
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
+ D F + +LGRGGFG+V+ ++ A G L A K+L ++R G E ++++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
R ++ L T T+ LV M G + + P G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L +LH II+RD+K N+LLD++ + D GLA + T T GT G +A
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMA 357
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE L + D F G+ L E+I + F
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
+ D F + +LGRGGFG+V+ ++ A G L A K+L ++R G E ++++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
R ++ L T T+ LV M G + + P G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L +LH II+RD+K N+LLD++ + D GLA + T T GT G +A
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMA 357
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE L + D F G+ L E+I + F
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 92
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L FC E+L Y NG + +R+ D +
Sbjct: 93 RLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 147
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIG 466
L YLH IIHRD+K NILL+E+ + DFG AK++ + GT
Sbjct: 148 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FGKVYK + + +A ++ E ++ + E+E+++ H +++L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
+ ++ + G+V + + E L P + + L++LH +IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 424 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
RD+KA N+L+ E + + DFG++ K + +D+ + T + E +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 480 EKTDVFGYGIMLLEL 494
K D++ GI L+E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 294 ATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAV 351
+ ++F +G G +G VYK R G +VA+K+++ + T G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L T + LV+ ++ + + + + +PL P K +GL+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAP 470
+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 471 EYLSTGK-SSEKTDVFGYGIMLLELITGQRAF 501
E L K S D++ G + E++T + F
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKE-ERTPGGELQFQTEVEMISMA 350
++ D F + LG G G V+K LV ++L E P Q E++++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPPSQLPLDWPTRKRIALGSAR 408
++ G + E + +M GS+ L++ R P Q+ ++++ +
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI------LGKVSIAVIK 134
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGH 467
GL+YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 135 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 188
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
++PE L S ++D++ G+ L+E+ G+
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 296 DSFSNKNILGRGGFGKVYKGR--LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR 353
+++ + LG G + VYKG+ L D +LVA+K ++ E G EV ++ H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N++ L T LV+ Y+ + + L + ++ K RGL+Y
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYC 116
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE-Y 472
H K++HRD+K N+L++E E + DFGLA+ V T+ + P+
Sbjct: 117 HRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDIL 172
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
L + S + D++G G + E+ TG+ F
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAVK + + + LQ EV ++ + H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L +++ A R + +C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + T G+ + APE L GK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYD 190
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAVK + + + LQ EV ++ + H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L +++ A R + +C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + A G + APE L GK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQGKKYD 190
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAVK + + + LQ EV ++ + H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L +++ A R + +C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + T G+ + APE L GK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYD 190
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FGKVYK + + +A ++ E ++ + E+E+++ H +++L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423
+ ++ + G+V + + E L P + + L++LH +IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 424 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
RD+KA N+L+ E + + DFG++ K + +D+ + T + E +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 480 EKTDVFGYGIMLLEL 494
K D++ GI L+E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 303 ILGRGGFGKVYKGRLADGS-LVAVKRLKEERTPGGEL--QFQTEVEMISMAV-HRNLLRL 358
++GRG + KV RL + A+K +K+E E QTE + A H L+ L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
T + V Y+ G + ++ + +LP + + A L+YLH+
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA--LNYLHERG- 130
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
II+RD+K N+LLD E + D+G+ K + T+ GT +IAPE L
Sbjct: 131 --IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
D + G+++ E++ G+ FD+ +++ D D++
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 303 ILGRGGFGKVYKGRLADGS-LVAVKRLKEERTPGGELQ--FQTEVEMISMAV-HRNLLRL 358
++GRG + KV RL + A+K +K+E E QTE + A H L+ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
T + V Y+ G + ++ + +LP + + A L+YLH+
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA--LNYLHERG- 126
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
II+RD+K N+LLD E + D+G+ K + T+ GT +IAPE L
Sbjct: 127 --IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
D + G+++ E++ G+ FD+ +++ D D++
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 17/247 (6%)
Query: 262 KPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNI-LGRGGFGKVYKG--RLA 318
KP+ D E P +LK ++L + D+ +I LG G FG V +G R+
Sbjct: 304 KPRPMPMDTSVFESPFSDPEELKD---KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMR 360
Query: 319 DGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 377
+ VA+K LK+ + E +++ + ++RL G C E L++ MA
Sbjct: 361 KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAG 418
Query: 378 GSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF 437
G ++P+ + + G+ YL + +HR++ A N+LL
Sbjct: 419 GGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRH 473
Query: 438 EAVVGDFGLAKLMDYKDTHVTTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
A + DFGL+K + D++ T G + APE ++ K S ++DV+ YG+ + E +
Sbjct: 474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533
Query: 496 T-GQRAF 501
+ GQ+ +
Sbjct: 534 SYGQKPY 540
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
V ++F +LG+GGFG+V ++ A G + A K+L+++R GE E +++
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
R ++ L T LV M G + + + P R +A
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-----EARAVFYAAEI 295
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L D +I++RD+K NILLD+ + D GLA + + GT+G++A
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMA 353
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE + + + D + G +L E+I GQ F
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG--GELQFQTEVEMISM 349
V ++F +LG+GGFG+V ++ A G + A K+L+++R GE E +++
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
R ++ L T LV M G + + + P R +A
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-----EARAVFYAAEI 295
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L D +I++RD+K NILLD+ + D GLA + + GT+G++A
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMA 353
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE + + + D + G +L E+I GQ F
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 63
Query: 362 CM-------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
T T+ LV Y +GS+ L ++ + ++AL +A GL++LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 118
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 466
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 467 HIAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
++APE L +S ++ D++ G++ E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 62
Query: 362 CM-------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
T T+ LV Y +GS+ L ++ + ++AL +A GL++LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 117
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 466
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 467 HIAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
++APE L +S ++ D++ G++ E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 303 ILGRGGFGKVYKGRLADGS-LVAVKRLKEERTPGGELQ--FQTEVEMISMAV-HRNLLRL 358
++GRG + KV RL + A+K +K+E E QTE + A H L+ L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
T + V Y+ G + ++ + +LP + + A L+YLH+
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA--LNYLHER-- 140
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
II+RD+K N+LLD E + D+G+ K + T+ GT +IAPE L
Sbjct: 141 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
D + G+++ E++ G+ FD+ +++ D D++
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 238
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 101
Query: 362 CM-------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
T T+ LV Y +GS+ L ++ + ++AL +A GL++LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 156
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 466
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 467 HIAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
++APE L +S ++ D++ G++ E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 88
Query: 362 CM-------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
T T+ LV Y +GS+ L ++ + ++AL +A GL++LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 143
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 466
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 467 HIAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
++APE L +S ++ D++ G++ E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 68
Query: 362 CM-------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
T T+ LV Y +GS+ L ++ + ++AL +A GL++LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 123
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 466
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 467 HIAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
++APE L +S ++ D++ G++ E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 65
Query: 362 CM-------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
T T+ LV Y +GS+ L ++ + ++AL +A GL++LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 120
Query: 415 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 466
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 467 HIAPEYLSTG------KSSEKTDVFGYGIMLLEL 494
++APE L +S ++ D++ G++ E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIV 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K + V GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 198
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ +S+ +D++ G ++ +L+ G
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAV+ + + + LQ EV ++ + H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L +++ A R + +C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + T G+ + APE L GK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYD 190
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 269 DVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKR 327
D E+ EV L + K +V + F +LG+G FGKV + A G A+K
Sbjct: 127 DNSGAEEMEVSLAKPKH------RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI 180
Query: 328 LKEERTPGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL- 384
LK+E + TE ++ + H L L+ T V Y G + L
Sbjct: 181 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 240
Query: 385 RERPPSQLPLDWPTRKRIALGS-ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 443
RER S+ R R L YLH + +++RD+K N++LD++ + D
Sbjct: 241 RERVFSE------DRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITD 292
Query: 444 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
FGL K KD GT ++APE L D +G G+++ E++ G+ F
Sbjct: 293 FGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 269 DVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKR 327
D E+ EV L + K +V + F +LG+G FGKV + A G A+K
Sbjct: 130 DNSGAEEMEVSLAKPKH------RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI 183
Query: 328 LKEERTPGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL- 384
LK+E + TE ++ + H L L+ T V Y G + L
Sbjct: 184 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 243
Query: 385 RERPPSQLPLDWPTRKRIALGS-ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 443
RER S+ R R L YLH + +++RD+K N++LD++ + D
Sbjct: 244 RERVFSE------DRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITD 295
Query: 444 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
FGL K KD GT ++APE L D +G G+++ E++ G+ F
Sbjct: 296 FGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 48/232 (20%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL---QFQTEVEMISMAVHR 353
F LGRGGFG V++ + D A+KR+ R P EL + EV+ ++ H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHP 63
Query: 354 NLLRLRGFCM--TPTERLL-----VYPYMANGSVASCLRERPPSQLPLDW-------PTR 399
++R + TE+L VY Y+ + C +E DW R
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYI---QMQLCRKENLK-----DWMNGRCTIEER 115
Query: 400 KR-----IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454
+R I L A + +LH ++HRD+K +NI + VGDFGL MD +
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 455 THVT-----------TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
T T GT +++PE + S K D+F G++L EL+
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G +G+V++G G VAVK ++E++ E TE+ M H N+L
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENILGFIAS 70
Query: 362 CMTP----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--- 414
MT T+ L+ Y GS+ L+ LD + RI L A GL++LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 415 --DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIGHIA 469
P I HRD+K+ NIL+ + + + D GLA + + GT ++A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 470 PEYLSTG------KSSEKTDVFGYGIMLLEL 494
PE L S ++ D++ +G++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G +G+V++G G VAVK ++E++ E TE+ M H N+L
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENILGFIAS 70
Query: 362 CMTP----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--- 414
MT T+ L+ Y GS+ L+ LD + RI L A GL++LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 415 --DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIGHIA 469
P I HRD+K+ NIL+ + + + D GLA + + GT ++A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 470 PEYLSTG------KSSEKTDVFGYGIMLLEL 494
PE L S ++ D++ +G++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 303 ILGRGGFGKVYKGRLADGS-LVAVKRLKEERTPGGELQ--FQTEVEMISMAV-HRNLLRL 358
++GRG + KV RL + A++ +K+E E QTE + A H L+ L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
T + V Y+ G + ++ + +LP + + A L+YLH+
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA--LNYLHER-- 172
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
II+RD+K N+LLD E + D+G+ K + T+ GT +IAPE L
Sbjct: 173 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 479 SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518
D + G+++ E++ G+ FD+ +++ D D++
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G +G+V++G G VAVK ++E++ E TE+ M H N+L
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENILGFIAS 99
Query: 362 CMTP----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--- 414
MT T+ L+ Y GS+ L+ LD + RI L A GL++LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 415 --DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIGHIA 469
P I HRD+K+ NIL+ + + + D GLA + + GT ++A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 470 PEYLSTG------KSSEKTDVFGYGIMLLEL 494
PE L S ++ D++ +G++L E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 303 ILGRGGFGKVY-KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN---LLRL 358
+LG+G FGKV R L AVK LK++ + T VE +A+ L +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 359 RGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
C +RL V Y+ G + +++ + P IA+G L +L
Sbjct: 87 HS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSK- 140
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
II+RD+K N++LD E + DFG+ K + D T GT +IAPE ++
Sbjct: 141 --GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 478 SSEKTDVFGYGIMLLELITGQRAFD 502
+ D + +G++L E++ GQ F+
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAVK + + + LQ EV + + H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L +++ A R + +C K
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAH--------GRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + A G + APE L GK +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQGKKYD 190
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 85
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 86 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 140
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIG 466
L YLH IIHRD+K NILL+E+ + DFG AK++ + A GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL-KEERTPGGELQFQTEV 344
+R LQ+ + + ++GRG FG+V R A + A+K L K E + F E
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLL--VYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
I MA + ++ FC ++ L V YM G + + + +P W K
Sbjct: 126 RDI-MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWA--KFY 179
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAV 461
L +H +IHRDVK N+LLD+ + DFG MD H TAV
Sbjct: 180 TAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 462 RGTIGHIAPEYLST----GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +I+PE L + G + D + G+ L E++ G F
Sbjct: 237 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 297 SFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTP-GGELQFQTEVEMISMAV 351
F +LG+G FGKV+ + GS L A+K LK+ ++ + E +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H +++L T + L+ ++ G + + R ++ K A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFT----RLSKEVMFTEEDVKFYLAELALALD 140
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAP 470
+LH II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++AP
Sbjct: 141 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAP 195
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E ++ ++ D + +G+++ E++TG F
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 303 ILGRGGFGKVY-KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN--LLRLR 359
+LG+G FGKV R L AVK LK++ + T VE +A+ L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 360 GFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
C +RL V Y+ G + +++ + P IA+G L +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSK-- 461
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
II+RD+K N++LD E + DFG+ K + D T GT +IAPE ++
Sbjct: 462 -GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 479 SEKTDVFGYGIMLLELITGQRAFD 502
+ D + +G++L E++ GQ F+
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 302 NILGRGGFGKVYKGRLADGS----LVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLL 356
+LG+G FGKV+ + GS L A+K LK+ ++ + E +++ H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+L T + L+ ++ G + + R ++ K A L +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFT----RLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLST 475
II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++APE ++
Sbjct: 146 G---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVNR 200
Query: 476 GKSSEKTDVFGYGIMLLELITGQRAF 501
++ D + +G+++ E++TG F
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 19/221 (8%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADG----SLVAVKRLKEER-TPGGELQFQTEVEM 346
+V ++F +LG G +GKV+ R G L A+K LK+ + T E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 347 ISMAVHRN---LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIA 403
+ R L+ L T T+ L+ Y+ G + + L +R +I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT-----EHEVQIY 164
Query: 404 LGS-ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
+G L +LH II+RD+K NILLD V+ DFGL+K +T
Sbjct: 165 VGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221
Query: 463 GTIGHIAPEYLSTGKSS--EKTDVFGYGIMLLELITGQRAF 501
GTI ++AP+ + G S + D + G+++ EL+TG F
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 297 SFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEERTP-GGELQFQTEVEMISMAV 351
F +LG+G FGKV+ + GS L A+K LK+ ++ + E +++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H +++L T + L+ ++ G + + R ++ K A L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFT----RLSKEVMFTEEDVKFYLAELALALD 141
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAP 470
+LH II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++AP
Sbjct: 142 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAP 196
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E ++ ++ D + +G+++ E++TG F
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMIS 348
+ +D + + +LG+G FG+V K ++ G AVK + ++ + + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+++L F LV G L + S+ RI
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLS 137
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 462
G++Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 138 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 187
Query: 463 --GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV + A G A+K LK+E + TE ++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
+ H L L+ T V Y G + L RER S+ R R
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEI 119
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH + +++RD+K N++LD++ + DFGL K KD GT
Sbjct: 120 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 176
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV + A G A+K LK+E + TE ++
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
+ H L L+ T V Y G + L RER S+ R R
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEI 117
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH + +++RD+K N++LD++ + DFGL K KD GT
Sbjct: 118 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 174
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMI 347
+ Q + N +G G G+V+K R G ++AVK+++ + +++++
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77
Query: 348 SMAVHR--NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
+ H +++ G +T T+ + M G+ A L++R Q P+ ++ +
Sbjct: 78 -LKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKR--MQGPIPERILGKMTVA 132
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGT 464
+ L YL + +IHRDVK +NILLDE + + DFG++ +L+D K + G
Sbjct: 133 IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GC 187
Query: 465 IGHIAPEYLSTGKSSE-----KTDVFGYGIMLLELITGQ 498
++APE + ++ + DV+ GI L+EL TGQ
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--------------PLDWPTRKRI 402
L G C L++ Y G + + LR + S + LD
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 461
+ A+G+++L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ YGI L EL + G + + + M+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 290
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
L + AE+ +++ C P+ RP ++V+++E
Sbjct: 291 --------------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV + A G A+K LK+E + TE ++
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
+ H L L+ T V Y G + L RER S+ R R
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE------DRARFYGAEI 118
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH + +++RD+K N++LD++ + DFGL K KD GT
Sbjct: 119 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 175
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 304 LGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+GRG F VYKG + ++ VA L++ + E Q F+ E E + H N++R
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 362 CMTPTER----LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC 417
+ + +LV +G++ + L+ ++ + ++I +GL +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL----KGLQFLHTRT 149
Query: 418 DPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
P IIHRD+K NI + +V +GD GLA L K AV GT APE
Sbjct: 150 PP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEE- 204
Query: 477 KSSEKTDVFGYGIMLLELITGQ 498
K E DV+ +G LE T +
Sbjct: 205 KYDESVDVYAFGXCXLEXATSE 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 84
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 85 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 139
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K + V GT
Sbjct: 140 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 195
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VAV+ + + + LQ EV ++ + H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T LV Y + G V L +++ A R + +C K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + + + G+ + APE L GK +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE-LFQGKKYD 190
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--------------PLDWPTRKRI 402
L G C L++ Y G + + LR + S + LD
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 461
+ A+G+++L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ YGI L EL + G + + + M+ +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 283
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
L + AE+ +++ C P+ RP ++V+++E
Sbjct: 284 --------------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 88
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 89 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 143
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K + V GT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTA 199
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--------------PLDWPTRKRI 402
L G C L++ Y G + + LR + S + LD
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 461
+ A+G+++L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ YGI L EL + G + + + M+ +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 267
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
L + AE+ +++ C P+ RP ++V+++E
Sbjct: 268 --------------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 301 KNILGRGGFGKVYKGR-LADGSLVAVKRL-KEERTPGGELQFQTEVEMISMAVHRNLLRL 358
+ +G+G F KV R + G VAVK + K + P + EV ++ + H N+++L
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
T LV Y + G V L +++ A R + +C
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQYCH 131
Query: 419 PK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
K I+HRD+KA N+LLD + + DFG + ++ + G+ + APE L GK
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDTFCGSPPYAAPE-LFQGK 188
Query: 478 SSE--KTDVFGYGIMLLELITGQRAFD 502
+ + DV+ G++L L++G FD
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 31/233 (13%)
Query: 293 VATDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMIS 348
+ +D + + +LG+G FG+V K ++ G AVK + ++ + + EV+++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+++L F LV G L + S+ RI
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLS 143
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 462
G++Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 144 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 193
Query: 463 --GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
GT +IAPE L G EK DV+ G++L L++G F+ AN+ D++
Sbjct: 194 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDIL 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--------------PLDWPTRKRI 402
L G C L++ Y G + + LR + S + LD
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 461
+ A+G+++L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ YGI L EL + G + + + M+ +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 285
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
L + AE+ +++ C P+ RP ++V+++E
Sbjct: 286 --------------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 43/293 (14%)
Query: 304 LGRGGFGKVYKGRL-----ADGSL-VAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL--------------PLDWPTRKRI 402
L G C L++ Y G + + LR + S + LD
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 461
+ A+G+++L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 520
R + +APE + + ++DV+ YGI L EL + G + + + M+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 290
Query: 521 XXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
L + AE+ +++ C P+ RP ++V+++E
Sbjct: 291 --------------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMIS 348
+ +D + + +LG+G FG+V K ++ G AVK + ++ + + EV+++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+++L F LV G L + S+ RI
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLS 160
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 462
G++Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 161 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 210
Query: 463 --GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 211 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 65
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 66 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 120
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 121 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 176
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 22/275 (8%)
Query: 297 SFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLK--EERTPGGELQFQTEVEMISMAVHR 353
+F + +GRG F +VY+ L DG VA+K+++ + E++++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N+++ + E +V G ++ ++ + + T + + L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 473
H +++HRD+K AN+ + +GD GL + K T + V GT +++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERI 208
Query: 474 STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDP 533
+ K+D++ G +L E+ Q F D + L P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPF------YGDKMNLYSLCKKIEQCDY------P 256
Query: 534 DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEV 568
L +++ E+ QL+ +C P RP ++ V
Sbjct: 257 PLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 64 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 118
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 119 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 174
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 64
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 65 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 119
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 120 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 175
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 62
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 63 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 117
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 118 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 173
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRL-KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VA+K + K + P + EV ++ + H N+++L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T L+ Y + G V L +++ A R + +C K
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAH--------GRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + ++ A G + APE L GK +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPE-LFQGKKYD 191
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 198
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 84
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 85 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 139
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 140 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 195
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMIS 348
+ +D + + +LG+G FG+V K ++ G AVK + ++ + + EV+++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+++L F LV G L + S+ RI
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLS 161
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 462
G++Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 162 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 211
Query: 463 --GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 212 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 69
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 70 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 124
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 180
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRN 354
F ++G+G FGKV R A+ AVK L+++ E +E ++ V
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 355 LLRLRGFCMTPTERL-LVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGSARGLSY 412
L F ++L V Y+ G + L RER + P + A A L Y
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-----PRARFYAAEIASALGY 154
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH I++RD+K NILLD + V+ DFGL K + + T+ GT ++APE
Sbjct: 155 LHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
L D + G +L E++ G F
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 25 EGDALHSLRSNLIDPNNVLQSWDPTLVNPC--TWFHVTCNNDNSVIRV---DLGNAAXXX 79
+ AL ++ +L +P L SW PT + C TW V C+ D RV DL +
Sbjct: 7 DKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDL-SGLNLP 63
Query: 80 XXXXXXXXXKNLQYLELYS----NNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGX 135
NL YL NN+ GPIP + LT L L + + +G IPD L
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 136 XXXXXXXXXXXXXXXGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFS-LFTPISFAN 193
G +P S++++ +L + NR+SG +PD+ GSFS LFT ++ +
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 194 N 194
N
Sbjct: 184 N 184
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 151 GPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCG 199
G +P LT + L L++S N L G +P G+ F ++ANN LCG
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 88
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 89 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 143
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 199
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 198
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 85
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 86 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 140
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 196
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 85
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 86 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 140
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 196
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHR 353
+ + +G G +G V+K R D G +VA+K+ L+ E P + E+ M+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
NL+ L LV+ Y + + L E Q + K I + + +++
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDH----TVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIGHIA 469
H H IHRDVK NIL+ + + DFG A+L+ DY D V T + +
Sbjct: 119 HKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRS 170
Query: 470 PEYL-STGKSSEKTDVFGYGIMLLELITG 497
PE L + DV+ G + EL++G
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 90
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 91 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 145
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIG 466
L YLH IIHRD+K NILL+E+ + DFG AK++ + GT
Sbjct: 146 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 198
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIG 466
L YLH IIHRD+K NILL+E+ + DFG AK++ + GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F V R LA A+K L KE + P E +++S
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 87
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 198
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 293 VATDSFSNKNILGRGGFGK-VYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMA- 350
V SF K++LG G G VY+G + D VAVKR+ E + EV+++ +
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFAD----REVQLLRESD 75
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE----RPPSQLPLDWPTRKRIALGS 406
H N++R FC TE+ + Y+A A+ L+E + + L L+ T + +
Sbjct: 76 EHPNVIRY--FC---TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT---LLQQT 127
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDE-----EFEAVVGDFGLAKLMDYKDTHVT--T 459
GL++LH I+HRD+K NIL+ + +A++ DFGL K + + +
Sbjct: 128 TSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 460 AVRGTIGHIAPEYLSTGKSSEKT---DVFGYGIMLLELIT-GQRAF--DLARLAN 508
V GT G IAPE LS T D+F G + +I+ G F L R AN
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 37/303 (12%)
Query: 281 GQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ 339
G+LK + + + +GRG +G V K G ++AVKR++ + Q
Sbjct: 7 GKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ 66
Query: 340 FQTEVEMIS--------MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQ 391
+++++ + + L R G C E + V S L + P +
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE 125
Query: 392 LPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451
+ +I L + + L++L ++ KIIHRD+K +NILLD + DFG++ +
Sbjct: 126 I------LGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL- 176
Query: 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSE----KTDVFGYGIMLLELITGQRAFDLARLA 507
D+ T G ++APE + S + ++DV+ GI L EL TG+ +
Sbjct: 177 -VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP----- 230
Query: 508 NDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSE 567
W P L N+ I LC RPK E
Sbjct: 231 --------KWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE 282
Query: 568 VVR 570
+++
Sbjct: 283 LLK 285
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 119
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 120 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 175
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 114
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILY 116
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ D+ A +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKASK 171
Query: 463 GT--IGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
G I +APE ++ + + +DV+ +G+ + E++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V R G VAVK + + EL F EV ++ H N++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E ++ ++ G++ + SQ+ L+ + + L+YLH +I
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + KD + GT +APE +S + +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM++E++ G+
Sbjct: 223 DIWSLGIMVIEMVDGE 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 46/243 (18%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEER---------------- 332
V + ++ K+ +G+G +G V +LA D + A+K L +++
Sbjct: 10 VQLNQYTLKDEIGKGSYGVV---KLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGT 66
Query: 333 --TPGGELQFQTEVEMISMAV-------HRNLLRLRGFCMTPTER--LLVYPYMANGSVA 381
PGG +Q + +E + + H N+++L P E +V+ + G V
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM 126
Query: 382 SCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV 441
P+ PL + +G+ YLH KIIHRD+K +N+L+ E+ +
Sbjct: 127 EV-----PTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKI 178
Query: 442 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGIMLLELITGQ 498
DFG++ D ++ V GT +APE LS + S + DV+ G+ L + GQ
Sbjct: 179 ADFGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
Query: 499 RAF 501
F
Sbjct: 238 CPF 240
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEE---RTPGGELQFQTEV 344
++ + F +LG+GG+GKV++ R G+ + A+K LK+ R + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
++ H ++ L T + L+ Y++ G + L I++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
L +LH II+RD+K NI+L+ + + DFGL K D VT GT
Sbjct: 133 A----LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGT 184
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
I ++APE L + D + G ++ +++TG F
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R S LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 116
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLE-LITGQRAFD 502
I +APE ++ + + +DV+ +G+ + E L+ G + F
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 114
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 170
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILY 116
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 114
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 170
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 114
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGRLADGS----LVAVKRLKEE---RTPGGELQFQTEV 344
++ + F +LG+GG+GKV++ R G+ + A+K LK+ R + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
++ H ++ L T + L+ Y++ G + L I++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 464
L +LH II+RD+K NI+L+ + + DFGL K D VT GT
Sbjct: 133 A----LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGT 184
Query: 465 IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
I ++APE L + D + G ++ +++TG F
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 114
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 293 VATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEER-TPGGELQ-FQTEVEMISM 349
V D F +G+G FGKV + D + A+K + +++ E++ E++++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
H L+ L + +V + G LR + T K
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGD----LRYHLQQNVHFKEETVKLFICELVMA 127
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L YL + +IIHRD+K NILLDE + DF +A ++ ++T +TT GT ++A
Sbjct: 128 LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA-GTKPYMA 182
Query: 470 PEYLSTGKS---SEKTDVFGYGIMLLELITGQRAFDL 503
PE S+ K S D + G+ EL+ G+R + +
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 292 QVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGE--LQFQTEVEMIS 348
+V + F +LG+G FGKV R A G A+K L++E + TE ++
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQLPLDWPTRKRIALGS- 406
H L L+ T V Y G + L RER ++ R R
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEI 117
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L YLH +++RD+K N++LD++ + DFGL K D GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 173
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L D +G G+++ E++ G+ F
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 320 GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 379
G VAVK++ + EL F EV ++ H N++ + + E +V ++ G+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 380 VASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEA 439
+ + + ++ + L R LSYLH+ +IHRD+K+ +ILL +
Sbjct: 129 LTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRI 180
Query: 440 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498
+ DFG + K+ + GT +APE +S + D++ GIM++E+I G+
Sbjct: 181 KLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V+K R G VA+K+ L E G + E++++ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 362 CMT---PTER-----LLVYPYMAN---GSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
C T P R LV+ + + G +++ L + S++ KR+ GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI-------KRVMQMLLNGL 138
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
Y+H + KI+HRD+KAAN+L+ + + DFGLA+
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKRL-KEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G F KV R + G VA+K + K + P + EV ++ + H N+++L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK- 420
T L+ Y + G V L +++ A R + +C K
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYL--------VAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 421 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 480
I+HRD+KA N+LLD + + DFG + ++ G+ + APE L GK +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDTFCGSPPYAAPE-LFQGKKYD 188
Query: 481 --KTDVFGYGIMLLELITGQRAFD 502
+ DV+ G++L L++G FD
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V+K R G VA+K+ L E G + E++++ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 362 CMT---PTER-----LLVYPYMAN---GSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
C T P R LV+ + + G +++ L + S++ KR+ GL
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI-------KRVMQMLLNGL 138
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
Y+H + KI+HRD+KAAN+L+ + + DFGLA+
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R S LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 116
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLE-LITGQRAFD 502
I +APE ++ + + +DV+ +G+ + E L+ G + F
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V+K R G VA+K+ L E G + E++++ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 362 CMT---PTER-----LLVYPYMAN---GSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
C T P R LV+ + + G +++ L + S++ KR+ GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI-------KRVMQMLLNGL 138
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
Y+H + KI+HRD+KAAN+L+ + + DFGLA+
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+G+G +G+V+ G+ G VAVK T +TE+ + H N+L GF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFT--TEEASWFRETEIYQTVLMRHENIL---GFIA 98
Query: 364 TP-------TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
T+ L+ Y NGS+ L+ LD + ++A S GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 417 C-----DPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDTHVTTAVR-GTIGHI 468
P I HRD+K+ NIL+ + + D GLA + D + + R GT ++
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 469 APEYLSTG------KSSEKTDVFGYGIMLLEL 494
PE L +S D++ +G++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 28/217 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRL--KEERTPGGELQFQTEVEMIS 348
+ +D + + +LG+G FG+V K ++ G AVK + ++ + + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR 408
H N+ +L F LV G L + S+ RI
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLS 137
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 462
G++Y H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 138 GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKD 187
Query: 463 --GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 295 TDSFSNKNILGRGGFGKVY----KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMA 350
+D F ++ LGRG VY KG +L +K+ +++ +TE+ ++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI------VRTEIGVLLRL 105
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H N+++L+ TPTE LV + G + + E+ K+I +
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI----LEAV 161
Query: 411 SYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
+YLH++ I+HRD+K N+L + + DFGL+K+++++ T V GT G+
Sbjct: 162 AYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGY 216
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L + D++ GI+ L+ G F
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVE 345
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIAL 404
M + LL+ + RLL + + V + ERP P Q D+ T +R AL
Sbjct: 61 MEVV-----LLKKVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGAL 112
Query: 405 GSARGLSYLHD------HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTH 456
S+ HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT- 169
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
V T GT + PE++ + ++ V+ GI+L +++ G F+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 304 LGRGGFGKVYKGR-LADGSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF 361
+G+G FG+V+K R G VA+K+ L E G + E++++ + H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 362 CMT---PTER-----LLVYPYMAN---GSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
C T P R LV+ + + G +++ L + S++ KR+ GL
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI-------KRVMQMLLNGL 137
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448
Y+H + KI+HRD+KAAN+L+ + + DFGLA+
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVE 345
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIAL 404
M + LL+ + RLL + + V + ERP P Q D+ T +R AL
Sbjct: 61 MEVV-----LLKKVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGAL 112
Query: 405 GSARGLSYLHD------HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTH 456
S+ HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT- 169
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
V T GT + PE++ + ++ V+ GI+L +++ G F+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVE 345
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIAL 404
M + LL+ + RLL + + V + ERP P Q D+ T +R AL
Sbjct: 61 MEVV-----LLKKVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGAL 112
Query: 405 GSARGLSYLHD------HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTH 456
S+ HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT- 169
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
V T GT + PE++ + ++ V+ GI+L +++ G F+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R S LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 118
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRL------KEERTPGGELQFQTEVEMIS 348
+ F ILG G F R LA A+K L KE + P E +++S
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVP----YVTRERDVMS 85
Query: 349 MAVHRNLLRLRGFCMTPTERLLV-YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
H ++L F E+L Y NG + +R+ D +
Sbjct: 86 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIV 140
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
L YLH IIHRD+K NILL+E+ + DFG AK++ + K V GT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 196
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
+++PE L+ + + +D++ G ++ +L+ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 66 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 122
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 179
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V + + G LVAVK++ + EL F EV ++ H N++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V ++ G++ + + ++ + L + LS LH +I
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + K+ + GT +APE +S +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 483 DVFGYGIMLLELITGQRAF 501
D++ GIM++E++ G+ +
Sbjct: 207 DIWSLGIMVIEMVDGEPPY 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R S LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 144
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V + + G LVAVK++ + EL F EV ++ H N++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V ++ G++ + + ++ + L + LS LH +I
Sbjct: 87 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 138
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + K+ + GT +APE +S +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM++E++ G+
Sbjct: 198 DIWSLGIMVIEMVDGE 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V + + G LVAVK++ + EL F EV ++ H N++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V ++ G++ + + ++ + L + LS LH +I
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + K+ + GT +APE +S +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 483 DVFGYGIMLLELITGQRAF 501
D++ GIM++E++ G+ +
Sbjct: 209 DIWSLGIMVIEMVDGEPPY 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R S LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 121
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 66 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 122
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 179
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVE 345
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 346 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIAL 404
M + LL+ + RLL + + V + ERP P Q D+ T +R AL
Sbjct: 83 MEVV-----LLKKVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGAL 134
Query: 405 GSARGLSYLHD------HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTH 456
S+ HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 135 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT- 191
Query: 457 VTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
V T GT + PE++ + ++ V+ GI+L +++ G F+
Sbjct: 192 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R S LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 119
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 69
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 70 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 126
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 183
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 66 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 122
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 179
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQ-FQTE 343
++++++ + F ++GRG FG+V +L + V ++ K E E F+ E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 344 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG---SVASCLRERPPSQLPLDWPTRK 400
+++ + + L LV Y G ++ S +R P ++ +
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 401 RIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG-LAKLMDYKDTHVTT 459
IA+ S L Y +HRD+K NIL+D + DFG KLM+ +
Sbjct: 185 VIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV 235
Query: 460 AVRGTIGHIAPEYLST-----GKSSEKTDVFGYGIMLLELITGQRAF 501
AV GT +I+PE L G+ + D + G+ + E++ G+ F
Sbjct: 236 AV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R + LD +
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILY 496
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 97
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 98 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 154
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 211
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 84
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 85 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 141
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 198
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 68
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 69 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 125
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 182
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 98
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 99 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 155
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 212
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 97
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 98 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 154
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 211
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 98
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 99 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 155
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 212
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V + + G LVAVK++ + EL F EV ++ H N++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V ++ G++ + + ++ + L + LS LH +I
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 142
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + K+ + GT +APE +S +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 483 DVFGYGIMLLELITGQ 498
D++ GIM++E++ G+
Sbjct: 202 DIWSLGIMVIEMVDGE 217
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 98
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 99 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 155
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 212
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 97
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 98 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 154
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 211
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R GEL T V M + LL+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 112
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 113 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 169
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 226
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 97
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 98 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 154
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 211
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 85
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 86 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 142
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 199
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 98
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 99 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 155
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 212
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 297 SFSNKNILGRGGFGKVYKGRLADGSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHRNL 355
+++N ++G G FG V++ +L + VA+K+ L+++R ELQ ++ + H N+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ------IMRIVKHPNV 94
Query: 356 LRLRGFCMTPTERL------LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
+ L+ F + ++ LV Y+ +V R + + K R
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
L+Y+H I HRD+K N+LLD G+ KL+D+ + A + I
Sbjct: 154 LAYIHSI---GICHRDIKPQNLLLDPP-------SGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 470 PEY-----LSTGKSSEKT--DVFGYGIMLLELITGQRAF 501
Y L G ++ T D++ G ++ EL+ GQ F
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 340 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS------CLRERPPSQLP 393
F+ E+++I+ + L G E ++Y YM N S+ L + +P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 394 LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453
+ K I SY+H+ + I HRDVK +NIL+D+ + DFG ++ M
Sbjct: 150 I--QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYM--V 203
Query: 454 DTHVTTAVRGTIGHIAPEYLSTGKSSE--KTDVFGYGIMLLELITGQRAFDLA 504
D + + RGT + PE+ S S K D++ GI L + F L
Sbjct: 204 DKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 69
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD----- 415
+ RLL + + S L P Q D+ T +R AL S+
Sbjct: 70 SGFSGVIRLLDW-FERPDSFVLILERMEPVQDLFDFIT-ERGALQEELARSFFWQVLEAV 127
Query: 416 -HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE+
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEW 184
Query: 473 LSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
+ + ++ V+ GI+L +++ G F+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 85
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 86 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 142
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 199
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 84
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 85 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 141
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 198
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 304 LGRGGFGKVYKGRLADG-SLVAVKRLKEERTPGGEL------------QFQTEVEMISMA 350
LG G +G+V + +G S A+K +K+ + G + E+ ++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H N+++L LV + G L E+ ++ D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQIINRHKFDECDAANIMKQILSGI 159
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
YLH H I+HRD+K NILL+ + + DFGL+ KD + + GT +
Sbjct: 160 CYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS-KDYKLRDRL-GTAYY 214
Query: 468 IAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
IAPE L K +EK DV+ G+++ L+ G
Sbjct: 215 IAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R GEL T V M + LL+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 112
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 113 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 169
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 226
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 35/218 (16%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHR------N 354
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYL 413
++RL + P +L+ ERP P Q D+ T +R AL S+
Sbjct: 91 VIRLLDWFERPDSFVLIL-------------ERPEPVQDLFDFIT-ERGALQEELARSFF 136
Query: 414 HD------HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTR 193
Query: 466 GHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
+ PE++ + ++ V+ GI+L +++ G F+
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQT 342
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 343 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI 402
E + H ++++L G +T ++ G + S L+ R + LD +
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILY 496
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
A + L+YL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 463 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
I +APE ++ + + +DV+ +G+ + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 303 ILGRGGFGKVYK--GRLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLR 359
+LG+G FG+V K R+ AVK + + + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE-YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
+ +V G + + +R RI G++Y+H H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH--- 140
Query: 420 KIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
I+HRD+K NILL +++ + + DFGL+ ++T + + GT +IAPE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 477 KSSEKTDVFGYGIMLLELITGQRAF 501
EK DV+ G++L L++G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V + + G LVAVK++ + EL F EV ++ H N++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V ++ G++ + + ++ + L + LS LH +I
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + K+ + GT +APE +S +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 483 DVFGYGIMLLELITGQRAF 501
D++ GIM++E++ G+ +
Sbjct: 252 DIWSLGIMVIEMVDGEPPY 270
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R GEL T V M + LL+
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 117
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 118 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 174
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 231
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 304 LGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC 362
+G G G V + + G LVAVK++ + EL F EV ++ H N++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 363 MTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKII 422
+ E +V ++ G++ + + ++ + L + LS LH +I
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 482
HRD+K+ +ILL + + DFG + K+ + GT +APE +S +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 483 DVFGYGIMLLELITGQRAF 501
D++ GIM++E++ G+ +
Sbjct: 329 DIWSLGIMVIEMVDGEPPY 347
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + LL+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 104
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD---- 415
+ RLL + + V + ERP P Q D+ T +R AL S+
Sbjct: 105 SGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 161
Query: 416 --HC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 218
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAFD 502
++ + ++ V+ GI+L +++ G F+
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 303 ILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRG 360
+LG+G FG+V K + AVK + + + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ +V G + + +R RI G++Y+H H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH---N 141
Query: 421 IIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
I+HRD+K NILL +++ + + DFGL+ ++T + + GT +IAPE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAPEVLR-GT 198
Query: 478 SSEKTDVFGYGIMLLELITGQRAF 501
EK DV+ G++L L++G F
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 303 ILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRG 360
+LG+G FG+V K + AVK + + + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
+ +V G + + +R RI G++Y+H H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH---N 141
Query: 421 IIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 477
I+HRD+K NILL +++ + + DFGL+ ++T + + GT +IAPE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAPEVLR-GT 198
Query: 478 SSEKTDVFGYGIMLLELITGQRAF 501
EK DV+ G++L L++G F
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 37/272 (13%)
Query: 310 GKVYKGRLADGSLVAVKRLK-EERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-- 366
G+++KGR G+ + VK LK + + F E + + H N+L + G C +P
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDV 426
L+ +M GS+ + L E + +D + AL ARG+++LH +P I +
Sbjct: 83 HPTLITHWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHAL 139
Query: 427 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT---- 482
+ ++++DE+ A + + D K + + +APE L K E T
Sbjct: 140 NSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQ--KKPEDTNRRS 191
Query: 483 -DVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVE 541
D++ + ++L EL+T R A L+N + + + P +
Sbjct: 192 ADMWSFAVLLWELVT--REVPFADLSNME-------IGMKVALEGLRPTIPPG-----IS 237
Query: 542 AEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 573
V +L+++ C P RPK +V +LE
Sbjct: 238 PHVSKLMKI---CMNEDPAKRPKFDMIVPILE 266
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 298 FSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLK----EERTPGGELQFQTEVEMISMAVH 352
+ + LG G F VYK R + +VA+K++K E G E++++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++ L + LV+ +M + +++ + L L K L + +GL Y
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEY 127
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH H I+HRD+K N+LLDE + DFGLAK + V T + APE
Sbjct: 128 LHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPEL 183
Query: 473 LSTGK-SSEKTDVFGYGIMLLELI 495
L + D++ G +L EL+
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELL 207
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQ-FQTEV 344
++E+Q+ + F ++GRG FG+V ++ + + ++ K E E F+ E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL---RERPPSQLPLDWPTRKR 401
+++ + + L LV Y G + + L ++ P + +
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 461
+A+ S L Y +HRD+K N+LLD + DFG M+ T ++
Sbjct: 186 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 462 RGTIGHIAPEYLST-----GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +I+PE L GK + D + G+ + E++ G+ F
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 304 LGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
+G G FG V++G VA+K K + +F E + H ++++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 360 GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDP 419
G +T ++ G + S L+ R S LD + A + L+YL
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESK--- 127
Query: 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 479
+ +HRD+ A N+L+ +GDFGL++ M+ + + + I +APE ++ + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 480 EKTDVFGYGIMLLE-LITGQRAFD 502
+DV+ +G+ + E L+ G + F
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQ-FQTEV 344
++E+Q+ + F ++GRG FG+V ++ + + ++ K E E F+ E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL---RERPPSQLPLDWPTRKR 401
+++ + + L LV Y G + + L ++ P + +
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 461
+A+ S L Y +HRD+K N+LLD + DFG M+ T ++
Sbjct: 202 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 462 RGTIGHIAPEYLST-----GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +I+PE L GK + D + G+ + E++ G+ F
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTI 465
ARG+ +L K IHRD+ A NILL E + DFGLA+ + +V R +
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 524
+APE + S K+DV+ YG++L E+ + G + ++ D L +
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLRE-------- 317
Query: 525 XXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
++ E ++ Q+ L C P +RP+ +E+V L
Sbjct: 318 ---------GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVEMIS-MAVHRNLL 356
LGRG FGKV + + VAVK LKE T TE+++++ + H N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 357 RLRGFCMTPTERLLV-YPYMANGSVASCLRER 387
L G C L+V Y G++++ L+ +
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSK 126
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRL-----KEERTPGGELQFQTEVEMISMAVHRNLLRL 358
LG G +G+V L + V+R K + + EV ++ + H N+++L
Sbjct: 45 LGSGAYGEVL---LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
F LV G + + R + + I G++YLH H
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH-- 155
Query: 419 PKIIHRDVKAANILLD-EEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 475
I+HRD+K N+LL+ +E +A++ DFGL+ + +++ GT +IAPE L
Sbjct: 156 -NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV--FENQKKMKERLGTAYYIAPEVLRK 212
Query: 476 GKSSEKTDVFGYGIMLLELITG 497
K EK DV+ G++L L+ G
Sbjct: 213 -KYDEKCDVWSIGVILFILLAG 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR 353
+ F K++LG G +G V G +VA+K+++ P L+ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N++ + + Y+ + + L +Q+ D + I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK---DTHVTTAVRGTIGHI-- 468
H +IHRD+K +N+L++ + V DFGLA+++D ++ T G + +
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 469 ----APE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L++ K S DV+ G +L EL + F
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR 353
+ F K++LG G +G V G +VA+K+++ P L+ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N++ + + Y+ + + L +Q+ D + I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK---DTHVTTAVRGTIGHI-- 468
H +IHRD+K +N+L++ + V DFGLA+++D ++ T G ++
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 469 ----APE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L++ K S DV+ G +L EL + F
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 17/219 (7%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR 353
+ F K++LG G +G V G +VA+K+++ P L+ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYL 413
N++ + + Y+ + + L +Q+ D + I + R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----------KDTHVTTAVRG 463
H +IHRD+K +N+L++ + V DFGLA+++D + + +T V
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV-A 184
Query: 464 TIGHIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T + APE L++ K S DV+ G +L EL + F
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEV 344
+R+L++ + + ++GRG FG+V R V +L K E + F E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLL--VYPYMANGSVASCLRERP-PSQLPLDWPTRKR 401
I MA + ++ F +R L V YM G + + + P + +
Sbjct: 120 RDI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 178
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 461
+AL + + + IHRDVK N+LLD+ + DFG M+ +
Sbjct: 179 LALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 462 RGTIGHIAPEYLST----GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +I+PE L + G + D + G+ L E++ G F
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEV 344
+R+L++ + + ++GRG FG+V R V +L K E + F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLL--VYPYMANGSVASCLRERP-PSQLPLDWPTRKR 401
I MA + ++ F +R L V YM G + + + P + +
Sbjct: 125 RDI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 461
+AL + + + IHRDVK N+LLD+ + DFG M+ +
Sbjct: 184 LALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 462 RGTIGHIAPEYLST----GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +I+PE L + G + D + G+ L E++ G F
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 304 LGRGGFGKVYKGRLAD---GSLVAVKRLKEERTPGGELQFQTEVEMISMA--VHRNLLRL 358
LGRG FG+V+ R+ D G AVK+++ E F+ E E+++ A ++ L
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE-------VFRAE-ELMACAGLTSPRIVPL 131
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA-RGLSYLHDHC 417
G + + GS+ ++E+ LP D R LG A GL YLH
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPED---RALYYLGQALEGLEYLHSR- 185
Query: 418 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTAVRGTIGHIAPEY 472
+I+H DVKA N+LL + A + DFG A + KD + GT H+APE
Sbjct: 186 --RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 473 LSTGKSSEKTDVFGYGIMLLELITG 497
+ K DV+ M+L ++ G
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRL--KEERTPGGELQFQTEV 344
+R+L++ + + ++GRG FG+V R V +L K E + F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLL--VYPYMANGSVASCLRERP-PSQLPLDWPTRKR 401
I MA + ++ F +R L V YM G + + + P + +
Sbjct: 125 RDI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 461
+AL + + + IHRDVK N+LLD+ + DFG M+ +
Sbjct: 184 LALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 462 RGTIGHIAPEYLST----GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +I+PE L + G + D + G+ L E++ G F
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 123 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 139 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 139 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 119 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 129 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 117 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 137 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 97/269 (36%), Gaps = 77/269 (28%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGEL---QFQTEVEMISMAVHR 353
F +GRGGFG V++ + D A+KR+ R P EL + EV+ ++ H
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHP 64
Query: 354 NLLR-LRGFCMTPTERLL--------------------------------VYPYMANGSV 380
++R + TP E+ + P+ +V
Sbjct: 65 GIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV 124
Query: 381 ASCLRERPPSQLPL-----------DWPTRK------------RIALGSARGLSYLHDHC 417
P L + DW R+ I + A + +LH
Sbjct: 125 GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK- 183
Query: 418 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-----------GTIG 466
++HRD+K +NI + VGDFGL MD + T GT
Sbjct: 184 --GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKL 241
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELI 495
+++PE + S K D+F G++L EL+
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 143
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+DE+ V DFG AK + + T + GT ++APE
Sbjct: 144 LHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 196
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 42/247 (17%)
Query: 281 GQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKE--ERTPGGE 337
G++ R LR+ ++ LG+G +G V+K G +VAVK++ + + + +
Sbjct: 1 GRVDRHVLRKYELVKK-------LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQ 53
Query: 338 LQFQTEVEMISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPPSQLPLD 395
F+ + + ++ H N++ L +R LV+ YM + + +R L+
Sbjct: 54 RTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANI-----LE 107
Query: 396 WPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----- 450
++ + + + YLH ++HRD+K +NILL+ E V DFGL++
Sbjct: 108 PVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164
Query: 451 --------------DYKDTH-VTTAVRGTIGHIAPEY-LSTGKSSEKTDVFGYGIMLLEL 494
++ D + T T + APE L + K ++ D++ G +L E+
Sbjct: 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI 224
Query: 495 ITGQRAF 501
+ G+ F
Sbjct: 225 LCGKPIF 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 22/227 (9%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRL-KEERTPGGELQ-FQTEV 344
L+E+++ D F ++GRG F +V ++ G + A+K + K + GE+ F+ E
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR---ERPPSQLPLDWPTRKR 401
+++ R + +L LV Y G + + L ER P+++ +
Sbjct: 113 DVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 461
+A+ S L Y +HRD+K NILLD + DFG + T +
Sbjct: 173 MAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA 223
Query: 462 RGTIGHIAPEYLST-------GKSSEKTDVFGYGIMLLELITGQRAF 501
GT +++PE L G + D + G+ E+ GQ F
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 481 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 482 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 146
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 142
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 301 KNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359
+ +L GGF VY+ + + G A+KRL Q M ++ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 360 GFCM----------TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
FC T L+ + G + L+ + S+ PL T +I + R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRA 148
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR------- 462
+ ++H P IIHRD+K N+LL + + DFG A + + + +A R
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 463 ----GTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFD 502
T + PE + S EK D++ G +L L Q F+
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 292 QVATDSF---SNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMIS 348
Q A +SF S ILG G FG+V+K L ++ + R + + + E+ +++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 349 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPT-RKRIALGSA 407
H NL++L + + +LV Y+ G + + + + LD K+I
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI----C 197
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
G+ ++H I+H D+K NIL + + + DFGLA+ YK GT
Sbjct: 198 EGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARR--YKPREKLKVNFGTP 252
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE ++ S TD++ G++ L++G F
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 142
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 144
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 150
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 151 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 142
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 94/342 (27%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 357 RLRG--------------FC-------MTPTERLLVYPYMANG----------------- 378
L G FC ++R PY G
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 379 ----------------------SVASCLRERPPSQLPLDWPTRKRIALGS---ARGLSYL 413
S++ E P L D+ T + + S A+G+ +L
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTIGHIAPE 471
K IHRD+ A NILL E+ + DFGLA+ + YKD R + +APE
Sbjct: 215 ASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPE 270
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXX 530
+ + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-------- 322
Query: 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 323 --PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 162
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 163 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 142
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 279 HLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGE 337
+G+ F + +D++ K LG+G F V + G A K + ++ +
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 338 LQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDW 396
Q + E + H N++RL + LV+ + G + + R
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 131
Query: 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYK 453
++I ++Y H + I+HR++K N+LL + + + DFGLA ++
Sbjct: 132 HCIQQIL----ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 182
Query: 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
D+ GT G+++PE L S+ D++ G++L L+ G F
Sbjct: 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 144
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 142
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 94/342 (27%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 357 RLRG--------------FC-------MTPTERLLVYPYMANG----------------- 378
L G FC ++R PY G
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 379 ----------------------SVASCLRERPPSQLPLDWPTRKRIALGS---ARGLSYL 413
S++ E P L D+ T + + S A+G+ +L
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTIGHIAPE 471
K IHRD+ A NILL E+ + DFGLA+ + YKD R + +APE
Sbjct: 210 ASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPE 265
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXX 530
+ + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-------- 317
Query: 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 318 --PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
+D++ K LG+G F V + G A K + ++ + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL + LV+ + G + + R ++I ++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAY 120
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
H + I+HR++K N+LL + + + DFGLA ++ D+ GT G+++
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE L S+ D++ G++L L+ G F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
+D++ K LG+G F V + G A K + ++ + Q + E + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL + LV+ + G + + R ++I ++Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAY 119
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
H + I+HR++K N+LL + + + DFGLA ++ D+ GT G+++
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 174
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE L S+ D++ G++L L+ G F
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 466
G+ YL + +HRD+ A N+LL + A + DFGL+K + + G +
Sbjct: 123 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501
APE ++ K S K+DV+ +G+++ E + GQ+ +
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
+D++ K LG+G F V + G A K + ++ + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL + LV+ + G + + R ++I ++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAY 120
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
H + I+HR++K N+LL + + + DFGLA ++ D+ GT G+++
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 470 PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
PE L S+ D++ G++L L+ G F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F +G G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V YM G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAF 501
APE + +T D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 94/342 (27%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 357 RLRG--------------FC-------MTPTERLLVYPYMANG----------------- 378
L G FC ++R PY G
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 379 ----------------------SVASCLRERPPSQLPLDWPTRKRIALGS---ARGLSYL 413
S++ E P L D+ T + + S A+G+ +L
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTIGHIAPE 471
K IHRD+ A NILL E+ + DFGLA+ + YKD R + +APE
Sbjct: 217 ASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPE 272
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXX 530
+ + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-------- 324
Query: 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 325 --PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 162
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 163 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 144
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 145 --ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 94/342 (27%)
Query: 304 LGRGGFGKVYKG------RLADGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLL 356
LGRG FG+V + + A VAVK LKE T +E++ +I + H N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 357 RLRG--------------FC-------MTPTERLLVYPYMANG----------------- 378
L G FC ++R PY G
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 379 ----------------------SVASCLRERPPSQLPLDWPTRKRIALGS---ARGLSYL 413
S++ E P L D+ T + + S A+G+ +L
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 414 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTIGHIAPE 471
K IHRD+ A NILL E+ + DFGLA+ + YKD R + +APE
Sbjct: 208 ASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPE 263
Query: 472 YLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXX 530
+ + ++DV+ +G++L E+ + G + ++ + L +
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-------- 315
Query: 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572
PD ++ Q L C G P RP SE+V L
Sbjct: 316 --PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F +G G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V YM G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 140
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 295 TDSFSNKNILGRGGFG--KVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVH 352
+D + +G G FG ++ + +L LVAVK + ER + Q E+ H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYI--ERGAAIDENVQREIINHRSLRH 75
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++R + +TPT ++ Y + G L ER + + G+SY
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGE----LYERICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 413 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
H +I HRD+K N LLD + DFG +K +T GT +IAP
Sbjct: 132 CHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAP 186
Query: 471 EYLSTGKSSEK-TDVFGYGIMLLELITGQRAFD 502
E L + K DV+ G+ L ++ G F+
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 146
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 147
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 148
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 149 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 139
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 140 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 146
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 140
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 177
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + T + GT ++APE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEI 230
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 304 LGRGGFGKVYKGRLADG-SLVAVKRLK----EERTPGGELQFQTEVEMISMAVHRNLLRL 358
+G G +G V+K + + +VA+KR++ +E P L+ E+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIVRL 66
Query: 359 RGFCMTPTERLLVYPYM---ANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
+ + LV+ + SC + LD K +GL + H
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-------LDPEIVKSFLFQLLKGLGFCHS 119
Query: 416 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 475
++HRD+K N+L++ E + DFGLA+ +A T+ + P+ L
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFG 175
Query: 476 GK-SSEKTDVFGYGIMLLELITGQR 499
K S D++ G + EL R
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 151
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 152 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 204
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 304 LGRGGFGKVYKGRLAD---GSLVAVKRLKEERTPGGELQFQTEVEMISMA--VHRNLLRL 358
LGRG FG+V+ R+ D G AVK+++ E F+ E E+++ A ++ L
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE-------VFRAE-ELMACAGLTSPRIVPL 150
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA-RGLSYLHDHC 417
G + + GS+ ++E+ LP D R LG A GL YLH
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPED---RALYYLGQALEGLEYLHSR- 204
Query: 418 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTAVRGTIGHIAPEY 472
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 205 --RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 473 LSTGKSSEKTDVFGYGIMLLELITG 497
+ K DV+ M+L ++ G
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + Q L RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYIHS- 146
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 177
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 230
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
RGL Y+H ++HRD+K AN+ ++ E+ +GDFGLA++MD +H G +
Sbjct: 131 RGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 467 --HIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ +P LS ++ D++ G + E++TG+ F
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ E++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFGLAK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ E++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFGLAK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 187
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 199
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 195
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 142
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 143 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEI 195
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 208
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 198
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKE--ERTPGGELQFQTEVEMISMAVH 352
+ + N + +G G +G V G VAVK+L + + ++ E+ ++ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 353 RNLLRLRGFCMTPTERLLVY--PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
N++ L TP L + Y+ + + L Q D + I RGL
Sbjct: 77 ENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 134
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + AP
Sbjct: 135 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAP 187
Query: 471 E-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E L+ ++ D++ G ++ EL+TG+ F
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 211
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 207
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 185
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 208
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 297 SFSNKNILGRGGFGKVYKG-RLADGSLVAVK-------RLKEERTPGGELQFQTEVEMI- 347
+ K+++GRG V + A G AVK RL E+ + E ++
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 348 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
+A H +++ L + + LV+ M G + L E+ + L + I
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLL 210
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
+S+LH + I+HRD+K NILLD+ + + DFG + ++ + + GT G+
Sbjct: 211 EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGY 265
Query: 468 IAPEYLSTGKSS------EKTDVFGYGIMLLELITGQRAF 501
+APE L ++ D++ G++L L+ G F
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 185
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 134 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 186
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 199
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTI 465
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ D+ T T T
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 466 GHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAF 501
+ APE + K K+ D++ G +L E+++ + F
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKE--ERTPGGELQFQTEVEMISMAVH 352
+ + N + +G G +G V G VAVK+L + + ++ E+ ++ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 353 RNLLRLRGFCMTPTERLLVYP--YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
N++ L TP L + Y+ + + L Q D + I RGL
Sbjct: 87 ENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 144
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + AP
Sbjct: 145 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAP 197
Query: 471 E-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E L+ ++ D++ G ++ EL+TG+ F
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 207
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRNLLRLRGFC 362
LG G F K + ++ +R E Q E+ + + H N+++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 363 MTPTERLLVYPYMANGSVASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421
LV + G + ++++ S+ + RK ++ +S++HD +
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHD---VGV 127
Query: 422 IHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 478
+HRD+K N+L +E E + DFG A+L + + T T+ + APE L+
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 479 SEKTDVFGYGIMLLELITGQRAF 501
E D++ G++L +++GQ F
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPF 209
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEE-RTPGGELQFQTEVEMISMAVHR 353
D + +G G +G V R G VA+K++ + E++++ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSV-------ASCLRERPPSQLPLDWPTRKRIALGS 406
N++ ++ + PT PY SV S L + S PL +
Sbjct: 115 NIIAIKDI-LRPT-----VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRG 463
RGL Y+H ++IHRD+K +N+L++E E +GDFG+A+ + + + T
Sbjct: 169 LRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 464 TIGHIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T + APE LS + ++ D++ G + E++ ++ F
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ ++ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 295 TDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRLKEER--TPGGELQFQTEVEMISMA 350
+D + LG G +G+V K +L G+ A+K +K+ T EV ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPPSQLPLDWPTRKRIALGSAR 408
H N+++L F LV G + LR++ +D + L
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQVLS--- 115
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 462
G +YLH H I+HRD+K N+LL+ + + DFGL+ H +
Sbjct: 116 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKE 165
Query: 463 --GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITG 497
GT +IAPE L K EK DV+ G++L L+ G
Sbjct: 166 RLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 149
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 202
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 32/225 (14%)
Query: 291 LQVATDSFSNKNILGRGGFGKVY--KGRLADGSLVAVKRLKEER--TPGGELQFQTEVEM 346
Q +D + LG G +G+V K +L G+ A+K +K+ T EV +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPPSQLPLDWPTRKRIAL 404
+ H N+++L F LV G + LR++ +D + L
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQVL 131
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
G +YLH H I+HRD+K N+LL+ + + DFGL+ H
Sbjct: 132 S---GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGG 178
Query: 462 R-----GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ GT +IAPE L K EK DV+ G++L L+ G F
Sbjct: 179 KMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEE-RTPGGELQFQTEVEMISMAVHR 353
D + +G G +G V R G VA+K++ + E++++ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 354 NLLRLRGFCMTPTERLLVYPYMANGSV-------ASCLRERPPSQLPLDWPTRKRIALGS 406
N++ ++ + PT PY SV S L + S PL +
Sbjct: 114 NIIAIKDI-LRPT-----VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRG 463
RGL Y+H ++IHRD+K +N+L++E E +GDFG+A+ + + + T
Sbjct: 168 LRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 464 TIGHIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T + APE LS + ++ D++ G + E++ ++ F
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTI 465
RGL Y+H ++HRD+K +N+L++ + + DFGLA++ D + H T T
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 466 GHIAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAF 501
+ APE + K K+ D++ G +L E+++ + F
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F +G G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT +APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 149
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 202
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 146
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG- 466
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVAT 192
Query: 467 --HIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL 356
++N + +G G +G V + VA+K++ + E++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 357 RLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH 416
+ PT + Y+ + + L + +Q L RGL Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHS- 147
Query: 417 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 474
++HRD+K +N+LL+ + + DFGLA++ D+ T T + APE +
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 475 TGKSSEKT-DVFGYGIMLLELITGQRAF 501
K K+ D++ G +L E+++ + F
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG- 466
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVAT 192
Query: 467 --HIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG- 466
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVAT 192
Query: 467 --HIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + D+GLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKE--ERTPGGELQFQTEVEMISMAVH 352
+ + N + +G G +G V G VAVK+L + + ++ E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 353 RNLLRLRGFCMTPTERLLVYP--YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
N++ L TP L + Y+ + + L SQ D + I RGL
Sbjct: 81 ENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGL 138
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
Y+H IIHRD+K +N+ ++E+ E + DFGL + + D +T V T + AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYV-ATRWYRAP 191
Query: 471 E-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E L+ ++ D++ G ++ EL+TG+ F
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
LG G FG V++ V V + P + + E+ +++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR----GLSYLHDHCDP 419
E +L+ +++ G L +R ++ D+ + + R GL ++H+H
Sbjct: 119 DKYEMVLILEFLSGGE----LFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEHS-- 169
Query: 420 KIIHRDVKAANILLDEEFEAVVG--DFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTG 476
I+H D+K NI+ + + + V DFGLA KL + VTTA T APE +
Sbjct: 170 -IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDRE 225
Query: 477 KSSEKTDVFGYGIMLLELITGQRAF----DLARLANDDDVMLLDW 517
TD++ G++ L++G F DL L N V DW
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN---VKRCDW 267
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 217
Query: 468 IAPEYLSTGKSSEKT-DVFGYGIMLLELITGQRAF 501
APE + T D++ G ++ EL+TG+ F
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 296 DSFSNKNILGRGGFGKVY-KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
D F K LG G FG V+ + G +K + ++R+ Q + E+E++ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
++++ +V G + + L + L+Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 415 DHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
++H+D+K NIL + + DFGLA+L D H T A GT ++APE
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAA-GTALYMAPE 196
Query: 472 YLSTGKSSEKTDVFGYGIMLLELITG 497
+ K D++ G+++ L+TG
Sbjct: 197 VFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T T +
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+ G+ F
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+ G + S LR P +I L Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 177
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 230
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG- 466
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVAT 208
Query: 467 --HIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG- 466
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVAT 205
Query: 467 --HIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 45/224 (20%)
Query: 303 ILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPG-----GELQFQTEVEMI----SMAVH 352
+LG+GGFG V+ G RL D VA+K + R G + EV ++ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLS 411
++RL + T +LV ERP P+Q D+ T K LG
Sbjct: 98 PGVIRLLDWFETQEGFMLVL-------------ERPLPAQDLFDYITEKG-PLGEGPSRC 143
Query: 412 YLHD------HCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-----TT 459
+ HC + ++HRD+K NIL+D G AKL+D+ + T
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILIDLR-------RGCAKLIDFGSGALLHDEPYT 196
Query: 460 AVRGTIGHIAPEYLSTGK-SSEKTDVFGYGIMLLELITGQRAFD 502
GT + PE++S + + V+ GI+L +++ G F+
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 304 LGRGGFGKV---YKGRLADGSLVAVKRLKEERTPGGEL---QFQTEVEMISMAVHRNLLR 357
+G G +G V GR G+ VA+K+L R EL + E+ ++ H N++
Sbjct: 33 VGSGAYGAVCSAVDGRT--GAKVAIKKLY--RPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 358 LRGFCMTPTERL-------LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
L TP E L LV P+M + ++ + + + + +GL
Sbjct: 89 LLD-VFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQF-----LVYQMLKGL 141
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
Y+H IIHRD+K N+ ++E+ E + DFGLA+ D + T + AP
Sbjct: 142 RYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAP 194
Query: 471 EY-LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
E L+ + ++ D++ G ++ E+ITG+ F
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 304 LGRGGFGKVYKGRLADG-SLVAVKRLK----EERTPGGELQFQTEVEMISMAVHRNLLRL 358
+G G +G V+K + + +VA+KR++ +E P L+ E+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIVRL 66
Query: 359 RGFCMTPTERLLVYPYM---ANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
+ + LV+ + SC + LD K +GL + H
Sbjct: 67 HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-------LDPEIVKSFLFQLLKGLGFCHS 119
Query: 416 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 475
++HRD+K N+L++ E + +FGLA+ +A T+ + P+ L
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFG 175
Query: 476 GK-SSEKTDVFGYGIMLLELITGQR 499
K S D++ G + EL R
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y+A G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++AP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L+ T T LV+ M G + L E+ + L ++I +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVIC 138
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
LH I+HRD+K NILLD++ + DFG + +D + +V GT ++APE
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPE 193
Query: 472 YLSTGKS------SEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D++ G+++ L+ G F
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 293 VATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLK----EERTPGGELQFQTEVEMI 347
+ D + LG G +G+VYK VA+KR++ EE PG ++ EV ++
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLL 87
Query: 348 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
HRN++ L+ L++ Y N + + + P + + K
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVI----KSFLYQLI 142
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAK 448
G+++ H + +HRD+K N+LL E +GDFGLA+
Sbjct: 143 NGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEE-RTPGGELQFQTEVEMISMAVHR 353
+ + N + +G G +G V G VAVK+L ++ + E+ ++ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 354 NLLRLRGFCMTPTERLLVY--PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
N++ L TP L + Y+ + + L Q D + I RGL
Sbjct: 78 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 135
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T + APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPE 188
Query: 472 -YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T T +
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+ G+ F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 32/205 (15%)
Query: 312 VYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR-------------NLLRL 358
++ RL GS V R+K+++T FQ V+ + + V R ++ L
Sbjct: 75 THQPRLGRGSFGEVHRMKDKQT-----GFQCAVKKVRLEVFRVEELVACAGLSSPRIVPL 129
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA-RGLSYLHDHC 417
G + + GS+ +++ LP D R LG A GL YLH
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPED---RALYYLGQALEGLEYLHTR- 183
Query: 418 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTAVRGTIGHIAPEY 472
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 473 LSTGKSSEKTDVFGYGIMLLELITG 497
+ K D++ M+L ++ G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T T +
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+ G+ F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L+ T T LV+ M G + L E+ + L ++I +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVIC 125
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
LH I+HRD+K NILLD++ + DFG + +D + V GT ++APE
Sbjct: 126 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 180
Query: 472 YLSTGKS------SEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D++ G+++ L+ G F
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L + L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L + L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L + L +V Y+ G + S LR P +I L Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA++ + + + G L +TE+
Sbjct: 149 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 205
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 260
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 261 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 315
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N+++L+ T T LV+ M G + L E+ + L ++I +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVIC 138
Query: 412 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471
LH I+HRD+K NILLD++ + DFG + +D + V GT ++APE
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPE 193
Query: 472 YLSTGKS------SEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D++ G+++ L+ G F
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363
+GRG +G VYK + DG LK+ G + E+ ++ H N++ L+ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 364 TPTER--LLVYPYMANG--SVASCLRERPPSQLPLDWP--TRKRIALGSARGLSYLHDHC 417
+ +R L++ Y + + R ++ P+ P K + G+ YLH +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 418 DPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMD--YKDTHVTTAVRGTIGHIAPE 471
++HRD+K ANIL+ E + D G A+L + K V T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 472 YLSTGKSSEKT-DVFGYGIMLLELITGQRAF 501
L + K D++ G + EL+T + F
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA++ + + + G L +TE+
Sbjct: 135 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 246
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 247 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 301
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Query: 295 TDSFSNKNILGRGGFG--KVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV- 351
+D + +G G FG ++ + + A+ LVAVK ++ G ++ + E+I+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYIER----GEKIDENVKREIINHRSL 72
Query: 352 -HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H N++R + +TPT +V Y + G L ER + + G+
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGV 128
Query: 411 SYLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
SY H ++ HRD+K N LLD + DFG +K + +AV GT +I
Sbjct: 129 SYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQPKSAV-GTPAYI 183
Query: 469 APEYLSTGKSSEK-TDVFGYGIMLLELITGQRAFD 502
APE L + K DV+ G+ L ++ G F+
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA+K + + + G L +TE+
Sbjct: 9 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 66 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 120
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 175
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA+K + + + G L +TE+
Sbjct: 10 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 121
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 176
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHR 353
D F LG G FG+V + + G+ A+K L +++ +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 354 NLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
L F L +V Y G + S LR P +I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 413 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + ++ D + G+++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + FGLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA+K + + + G L +TE+
Sbjct: 10 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 121
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 176
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA+K + + + G L +TE+
Sbjct: 16 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 73 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 127
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 128 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 182
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGE-------LQFQTEV 344
D + LG G G+V +LA VA+K + + + G L +TE+
Sbjct: 10 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIAL 404
E++ H +++++ F + +V M G L ++ L T K
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFY 121
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + +
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 176
Query: 462 RGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505
GT ++APE L T + D + G++L ++G F R
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + DF LA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-- 351
+D + +G G FG R LVAVK ++ G ++ + E+I+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIAANVKREIINHRSLR 73
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N++R + +TPT +V Y + G L ER + + G+S
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 412 YLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
Y H ++ HRD+K N LLD + DFG +K +T GT +IA
Sbjct: 130 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIA 184
Query: 470 PEYLSTGKSSEK-TDVFGYGIMLLELITGQRAFD 502
PE L + K DV+ G+ L ++ G F+
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRL---KEERTPGGELQ-FQTEVEMISMA 350
D + ++G+G F V + G AVK + K +PG + + E + M
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H +++ L + +V+ +M + + +R + L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR-GTIG 466
Y HD+ IIHRDVK N+LL + + +GDFG+A + ++ + R GT
Sbjct: 144 RYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPH 198
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE + + DV+G G++L L++G F
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 32/205 (15%)
Query: 312 VYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR-------------NLLRL 358
++ R+ GS V R+K+++T FQ V+ + + V R ++ L
Sbjct: 61 THQPRVGRGSFGEVHRMKDKQT-----GFQCAVKKVRLEVFRVEELVACAGLSSPRIVPL 115
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA-RGLSYLHDHC 417
G + + GS+ +++ LP D R LG A GL YLH
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPED---RALYYLGQALEGLEYLHTR- 169
Query: 418 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTAVRGTIGHIAPEY 472
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 473 LSTGKSSEKTDVFGYGIMLLELITG 497
+ K D++ M+L ++ G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + D GLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 289 RELQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEM- 346
+ +V D LGRG +G V K R + G ++AVKR++ + + ++++
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 347 -------ISMAVHRNLLRLRG--FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWP 397
++ + L R CM + L Y + E
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPED---------- 153
Query: 398 TRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457
+IA+ + L +LH +IHRDVK +N+L++ + + DFG++ + D+
Sbjct: 154 ILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVA 209
Query: 458 TTAVRGTIGHIAPEY----LSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
T G ++APE L+ S K+D++ GI ++EL + +D
Sbjct: 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 32/205 (15%)
Query: 312 VYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR-------------NLLRL 358
++ R+ GS V R+K+++T FQ V+ + + V R ++ L
Sbjct: 77 THQPRVGRGSFGEVHRMKDKQT-----GFQCAVKKVRLEVFRVEELVACAGLSSPRIVPL 131
Query: 359 RGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA-RGLSYLHDHC 417
G + + GS+ +++ LP D R LG A GL YLH
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPED---RALYYLGQALEGLEYLHTR- 185
Query: 418 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTAVRGTIGHIAPEY 472
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 473 LSTGKSSEKTDVFGYGIMLLELITG 497
+ K D++ M+L ++ G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + D GLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-- 351
+D + +G G FG R LVAVK ++ G ++ + E+I+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLR 72
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N++R + +TPT +V Y + G L ER + + G+S
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 412 YLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
Y H ++ HRD+K N LLD + DFG +K +T GT +IA
Sbjct: 129 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIA 183
Query: 470 PEYLSTGKSSEK-TDVFGYGIMLLELITGQRAFD 502
PE L + K DV+ G+ L ++ G F+
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 296 DSFSNKNILGRGGFGKVY----KGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV 351
D++ K+++GRG +G VY K + ++ V R+ E+ + E+ +++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL--REITILNRLK 85
Query: 352 HRNLLRLRGFCMTPTERLLVYP--YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
++RL + E LL + Y+ S L++ + + L K I G
Sbjct: 86 SDYIIRLHDLIIP--EDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVT 458
++H+ IIHRD+K AN LL+++ + DFGLA+ ++ KD H+
Sbjct: 144 EKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 25/218 (11%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
TD + +G+G F V + +L G A K + ++ + Q + E + + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL-- 410
N++RL LV+ + G +L D R+ + A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGG------------ELFEDIVAREYYSEADASHCIQ 110
Query: 411 ----SYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRG 463
+ LH H ++HRD+K N+LL + + + DFGLA + D G
Sbjct: 111 QILEAVLHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GDQQAWFGFAG 168
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T G+++PE L + D++ G++L L+ G F
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
RGL Y+H IIHRD+K +N+ ++E+ E + D GLA+ + D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYV-ATRWY 188
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 43/217 (19%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGF- 361
+G G +G V G VA+K+L FQ+E+ + +R LL L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP--------FQSEI--FAKRAYRELLLLKHMQ 99
Query: 362 ---------CMTPTERL-------LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALG 405
TP L LV P+M E ++ + +
Sbjct: 100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKI-------QYLVYQ 152
Query: 406 SARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 465
+GL Y+H ++HRD+K N+ ++E+ E + DFGLA+ + D +T V T
Sbjct: 153 MLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TR 205
Query: 466 GHIAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ APE LS ++ D++ G ++ E++TG+ F
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN---LLRLR 359
LGRG F V + + G A K LK+ R G + + + E+ + + ++ ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 360 GFCMTPTERLLVYPYMANGSVAS-CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+E +L+ Y A G + S CL E D R+ G+ YLH +
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI---RLIKQILEGVYYLHQN-- 150
Query: 419 PKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 475
I+H D+K NILL + + + DFG+++ + + + GT ++APE L+
Sbjct: 151 -NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNY 207
Query: 476 GKSSEKTDVFGYGIMLLELITGQRAF 501
+ TD++ GI+ L+T F
Sbjct: 208 DPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 295 TDSFSNKNILGRGGFGKVYKGRLADGSL-VAVKRLKEERT---------PGGELQFQTEV 344
+ +S + LG G FG V+ + + V VK +K+E+ G++ E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL--EI 80
Query: 345 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRI-- 402
++S H N++++ LV +G +R P LD P I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFR 137
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 462
L SA G L D IIHRD+K NI++ E+F + DFG A ++ T
Sbjct: 138 QLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC-- 190
Query: 463 GTIGHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAF 501
GTI + APE L + +++ G+ L L+ + F
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 86/208 (41%), Gaps = 25/208 (12%)
Query: 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKR-LKEERTPGGELQFQTEV-EMISMAVH 352
SF + LG G +G+V+K R DG L AVKR + R P + EV + H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 353 RNLLRLR------GFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS 406
+RL G TE L P + A P +Q+ W + L
Sbjct: 117 PCCVRLEQAWEEGGILYLQTE--LCGPSLQQHCEAWGA-SLPEAQV---WGYLRDTLLA- 169
Query: 407 ARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466
L++LH ++H DVK ANI L +GDFGL L++ G
Sbjct: 170 ---LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPR 221
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLEL 494
++APE L G DVF G+ +LE+
Sbjct: 222 YMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 467
+GL Y+H ++HRD+K N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 137 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWY 189
Query: 468 IAPE-YLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE LS ++ D++ G ++ E++TG+ F
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 293 VATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRL-KEERTPGGELQFQTEVEMISMA 350
V +D + K +G G + + + A AVK + K +R P E++ ++
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-----LLRYG 78
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVA-SCLRERPPSQLPLDWPTRKRIALGSARG 409
H N++ L+ LV M G + LR++ S+ + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
+ YLH ++HRD+K +NIL +E E + + DFG AK + ++ + T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE L E D++ GI+L ++ G F
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 394 LDWPTRKRIALGSAR----GLSYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLA 447
LD+ R+++ R L YLH+ I HRD+K N L ++ FE + DFGL+
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 448 K---LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE--KTDVFGYGIMLLELITGQRAF 501
K ++ + + T GT +APE L+T S K D + G++L L+ G F
Sbjct: 218 KEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 304 LGRGGFGKVYKG---RLAD-GSL----VAVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
LG+G F K++KG + D G L V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 356 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
+ G C+ E +LV ++ GS+ + L++ + + + W + +A A + +L +
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAAAMHFLEE 131
Query: 416 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT----AVRGTIGHIAPE 471
+ +IH +V A NILL E + G+ KL D +T ++ I + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-PGISITVLPKDILQERIPWVPPE 187
Query: 472 YLSTGKS-SEKTDVFGYGIMLLELITG 497
+ K+ + TD + +G L E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 293 VATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRL-KEERTPGGELQFQTEVEMISMA 350
V +D + K +G G + + + A AVK + K +R P E++ ++
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-----LLRYG 78
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVA-SCLRERPPSQLPLDWPTRKRIALGSARG 409
H N++ L+ LV M G + LR++ S+ + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVRGTI 465
+ YLH ++HRD+K +NIL +E E + + DFG AK + ++ + T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE L E D++ GI+L ++ G F
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 423 HRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 481
HRDVK NIL+ + A + DFG+A D K T + V GT+ + APE S ++ +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 482 TDVFGYGIMLLELITG 497
D++ +L E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 304 LGRGGFGKVYKG---RLAD-GSL----VAVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
LG+G F K++KG + D G L V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 356 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
+ G C E +LV ++ GS+ + L++ + + + W + +A A + +L +
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAWAMHFLEE 131
Query: 416 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT----AVRGTIGHIAPE 471
+ +IH +V A NILL E + G+ KL D +T ++ I + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-PGISITVLPKDILQERIPWVPPE 187
Query: 472 YLSTGKS-SEKTDVFGYGIMLLELITG 497
+ K+ + TD + +G L E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 296 DSFSNKNILGRGGFGKVYK-GRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
D + LG G FG V++ A G+ A K + E + E++ +S+ H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPT 215
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
L+ L E +++Y +M+ G + + + +++ D + +GL ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQV--CKGLCHMH 272
Query: 415 DHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPE 471
++ +H D+K NI+ + E + DFGL +D K + VTT GT APE
Sbjct: 273 EN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 326
Query: 472 YLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
TD++ G++ L++G F NDD+ +
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GENDDETL 365
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
TD + LG+G F V + ++ G A K + ++ + Q + E + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL LV+ + G + + R ++ + + + L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQQILES 115
Query: 413 LHDHCDPK-IIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
+ +HC I+HRD+K N+LL + + + DFGLA + D GT G++
Sbjct: 116 V-NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+PE L + D++ G++L L+ G F
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 296 DSFSNKNILGRGGFGKVY--------------KGRLADGSLVAVKRLKEERTPGGELQFQ 341
D++ K+++GRG +G VY K L+ KR+ E T L+
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 342 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKR 401
+ + + + +LL+ + L + +A+ + + + + L K
Sbjct: 86 YIIRLYDLIIPDDLLKF--------DELYIVLEIADSDLKKLFK----TPIFLTEEHIKT 133
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVT 458
I G +++H+ IIHRD+K AN LL+++ V DFGLA+ ++ KDT++
Sbjct: 134 ILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV 188
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 296 DSFSNKNILGRGGFGKVYK-GRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN 354
D + LG G FG V++ A G+ A K + E + E++ +S+ H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPT 109
Query: 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH 414
L+ L E +++Y +M+ G + + + +++ D + +GL ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQV--CKGLCHMH 166
Query: 415 DHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPE 471
++ +H D+K NI+ + E + DFGL +D K + VTT GT APE
Sbjct: 167 EN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 220
Query: 472 YLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513
TD++ G++ L++G F NDD+ +
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GENDDETL 259
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEM--- 346
++V D LGRG +G V K R + G ++AVKR++ + + ++++
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 347 -----ISMAVHRNLLRLRG--FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTR 399
++ + L R CM + + S+ ++ +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICME----------LMDTSLDKFYKQVIDKGQTIPEDIL 111
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 459
+IA+ + L +LH +IHRDVK +N+L++ + + DFG++ + D
Sbjct: 112 GKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKD 167
Query: 460 AVRGTIGHIAPEY----LSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
G ++APE L+ S K+D++ GI ++EL + +D
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
TD + LG+G F V + ++ G A K + ++ + Q + E + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSY 412
N++RL LV+ + G + + R ++ + + + L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQQILES 115
Query: 413 LHDHCDPK-IIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
+ +HC I+HRD+K N+LL + + + DFGLA + D GT G++
Sbjct: 116 V-NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+PE L + D++ G++L L+ G F
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-- 351
+D + +G G FG R LVAVK ++ G ++ + E+I+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLR 73
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N++R + +TPT +V Y + G L ER + + G+S
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 412 YLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
Y H ++ HRD+K N LLD + FG +K +T GT +IA
Sbjct: 130 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIA 184
Query: 470 PEYLSTGKSSEK-TDVFGYGIMLLELITGQRAFD 502
PE L + K DV+ G+ L ++ G F+
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 302 NILGRGGFGKVYK----GRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR 357
++LG G +GKV + L ++ +K+ K R P GE + E++++ H+N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 358 LRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSAR--------G 409
L ++ + YM ++E LD KR + A G
Sbjct: 71 LVDVLYNEEKQKM---YMVMEYCVCGMQEM------LDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHI 468
L YLH I+H+D+K N+LL + G+A+ L + +G+
Sbjct: 122 LEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 469 APEYLSTGK---SSEKTDVFGYGIMLLELITGQRAFD 502
PE ++ G S K D++ G+ L + TG F+
Sbjct: 179 PPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 302 NILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRG 360
+LG G + KV L +G AVK ++++ F+ + ++N+L L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 361 FCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK 420
F T LV+ + GS+ + +++ Q + R+ A L +LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQK----QKHFNEREASRVVRDVAAALDFLHTK---G 131
Query: 421 IIHRDVKAANILLD--EEFEAV-VGDFGLAKLMDYKD--THVT----TAVRGTIGHIAPE 471
I HRD+K NIL + E+ V + DF L M + T +T T G+ ++APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 472 YLS--TGKSS---EKTDVFGYGIMLLELITGQRAF 501
+ T +++ ++ D++ G++L +++G F
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 296 DSFSNKNILGRGGFGKVYKGR-LADGSLVAVKR-LKEERTPGGELQFQTEVEMISMAVHR 353
D F + + G+G FG V G+ + G VA+K+ +++ R ELQ ++ ++ H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH---HP 79
Query: 354 NLLRLRGFCMTPTER------LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407
N+++L+ + T ER L V ++ C R Q+ K
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIG 466
R + LH + HRD+K N+L++E + + DFG AK + + +V A +
Sbjct: 140 RSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV--AYICSRY 196
Query: 467 HIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAF 501
+ APE + + + D++ G + E++ G+ F
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 295 TDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-- 351
+D + +G G FG R LVAVK ++ G ++ + E+I+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLR 73
Query: 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411
H N++R + +TPT +V Y + G L ER + + G+S
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 412 YLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 469
Y H ++ HRD+K N LLD + FG +K T GT +IA
Sbjct: 130 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIA 184
Query: 470 PEYLSTGKSSEK-TDVFGYGIMLLELITGQRAFD 502
PE L + K DV+ G+ L ++ G F+
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 21/228 (9%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQT----- 342
+ EL ++ + + G +G V G ++G VA+KR+ + G + +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 343 -----EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWP 397
E+ +++ H N+L LR + E + Y+ + + L + Q + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 398 TRKRIALGSAR-GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKD 454
+ + GL LH+ ++HRD+ NILL + + + DF LA+ D
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 455 THVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGIMLLELITGQRAF 501
TH T + APE + K K D++ G ++ E+ + F
Sbjct: 191 THYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 7/216 (3%)
Query: 291 LQVATDSFSNKNILGRGGFGKVYKGR-LADGSLVAVKRLKEERTPGGELQFQTEVEMISM 349
+V D LGRG +G V K R + G + AVKR++ + + ++++
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR 88
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARG 409
V + + + + + S+ ++ + +IA+ +
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 148
Query: 410 LSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMD--YKDTHVTTAVRGTIG 466
L +LH +IHRDVK +N+L++ + DFG++ L+D KD
Sbjct: 149 LEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPE 206
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
I PE G S K+D++ GI +EL + +D
Sbjct: 207 RINPELNQKGYSV-KSDIWSLGITXIELAILRFPYD 241
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 21/228 (9%)
Query: 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQT----- 342
+ EL ++ + + G +G V G ++G VA+KR+ + G + +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 343 -----EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWP 397
E+ +++ H N+L LR + E + Y+ + + L + Q + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 398 TRKRIALGSAR-GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKD 454
+ + GL LH+ ++HRD+ NILL + + + DF LA+ D
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 455 THVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGIMLLELITGQRAF 501
TH T + APE + K K D++ G ++ E+ + F
Sbjct: 191 THYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 30/114 (26%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT------------- 455
G+ Y+H I+HRD+K AN L++++ V DFGLA+ +DY +
Sbjct: 168 GVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 456 -------HVTTAVRGTIGHI------APEYLSTGKS-SEKTDVFGYGIMLLELI 495
H R GH+ APE + ++ +E DV+ G + EL+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 25/227 (11%)
Query: 282 QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRL-KEERTPGGELQ 339
QL R S++ TD + K +G G + + A AVK + K +R P E++
Sbjct: 12 QLHRNSIQ----FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE 67
Query: 340 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA-SCLRERPPSQLPLDWPT 398
++ H N++ L+ +V M G + LR++ S+
Sbjct: 68 I-----LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS--- 119
Query: 399 RKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKD 454
+ + + YLH ++HRD+K +NIL +E E++ + DFG AK + ++
Sbjct: 120 --AVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 455 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ T T +APE L D++ G++L ++TG F
Sbjct: 175 GLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 40/232 (17%)
Query: 300 NKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGG--ELQFQTEVEMISMAVHRNLLR 357
++ ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIR 73
Query: 358 LRGFCMTPTERLLVYPY-MANGSVASCLRERPPSQLPLDWPTRKR-IAL--GSARGLSYL 413
+C T+R L + N ++ + + S L I+L A G+++L
Sbjct: 74 Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 414 HDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTTA 460
H KIIHRD+K NIL+ E ++ DFGL K +D + T
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 461 VR---GTIGHIAPEYLSTGKS-------SEKTDVFGYGIMLLELIT-GQRAF 501
+ GT G APE L + + D+F G + +++ G+ F
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 316 RLADGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374
R++D VA+K ++++R GEL T V M + LL+ + RLL +
Sbjct: 72 RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDWFE 126
Query: 375 MANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHD------HC-DPKIIHRDV 426
+ V + ERP P Q D+ T +R AL S+ HC + ++HRD+
Sbjct: 127 RPDSFV--LILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDI 183
Query: 427 KAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DV 484
K NIL+D E + DFG L+ KDT V T GT + PE++ + ++ V
Sbjct: 184 KDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 485 FGYGIMLLELITGQRAFD 502
+ GI+L +++ G F+
Sbjct: 241 WSLGILLYDMVCGDIPFE 258
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 29/220 (13%)
Query: 295 TDSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVH 352
TD + LG+G F V + + A K + ++ + Q + E + + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA----- 407
N++RL LV+ + G +L D R+ + A
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGG------------ELFEDIVAREYYSEADASHCIH 137
Query: 408 ---RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAV 461
++++H H I+HRD+K N+LL + + + DFGLA + +
Sbjct: 138 QILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGF 193
Query: 462 RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
GT G+++PE L + D++ G++L L+ G F
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 304 LGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGF 361
LG+G F V + ++ G A K + ++ + Q + E + + H N++RL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL------SYLHD 415
L++ + G +L D R+ + A + LH
Sbjct: 90 ISEEGHHYLIFDLVTGG------------ELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 416 HCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 472
H ++HRD+K N+LL + + + DFGLA ++ + GT G+++PE
Sbjct: 138 H-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEV 195
Query: 473 LSTGKSSEKTDVFGYGIMLLELITGQRAF 501
L + D++ G++L L+ G F
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSLV--AVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
++ +N +GRG +G+V K + G+ + A K++ + + +F+ E+E++ H N+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 68
Query: 356 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
+RL T+ LV G L ER + RI ++Y H
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 416 HCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
+ HRD+K N L D + + DFGLA +K + GT +++P
Sbjct: 125 L---NVAHRDLKPENFLFLTDSPDSPLKLI--DFGLA--ARFKPGKMMRTKVGTPYYVSP 177
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVML 514
+ L G + D + G+M+ L+ G F D +VML
Sbjct: 178 QVLE-GLYGPECDEWSAGVMMYVLLCGYPPFS---APTDXEVML 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G+++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 298 FSNKNILGRGGFGKVYKGRLADGSLV--AVKRLKEERTPGGELQFQTEVEMISMAVHRNL 355
++ +N +GRG +G+V K + G+ + A K++ + + +F+ E+E++ H N+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 85
Query: 356 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD 415
+RL T+ LV G L ER + RI ++Y H
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 416 HCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 470
+ HRD+K N L D + + DFGLA +K + GT +++P
Sbjct: 142 L---NVAHRDLKPENFLFLTDSPDSPLKLI--DFGLA--ARFKPGKMMRTKVGTPYYVSP 194
Query: 471 EYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVML 514
+ L G + D + G+M+ L+ G F D +VML
Sbjct: 195 QVLE-GLYGPECDEWSAGVMMYVLLCGYPPFS---APTDXEVML 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G+++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 23/218 (10%)
Query: 296 DSFSNKNILGRGGFGKVYK------GRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM 349
D + LG G F V K G+ + +RL R + + EV ++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 350 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTR--KRIALGSA 407
H N++ L T+ +L+ ++ G + L E+ L D T+ K+I
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQI----L 125
Query: 408 RGLSYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRG 463
G+ YLH +I H D+K NI LLD+ + DFG+A ++ + + G
Sbjct: 126 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFG 180
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T +APE ++ + D++ G++ L++G F
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 293 VATDSFSNKNILGRGGFGKVYK------GRLADGSLVAVKRLKEERTPGGELQFQTEVEM 346
+ D + LG G F V K G+ + +RL R + + EV +
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTR--KRIAL 404
+ H N++ L T+ +L+ ++ G + L E+ L D T+ K+I
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQI-- 117
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTA 460
G+ YLH +I H D+K NI LLD+ + DFG+A ++ +
Sbjct: 118 --LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KN 170
Query: 461 VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ GT +APE ++ + D++ G++ L++G F
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 80 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQH-- 130
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 131 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 96 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQHG- 147
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 148 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 293 VATDSFSNKNILGRGGFGKVYK------GRLADGSLVAVKRLKEERTPGGELQFQTEVEM 346
+ D + LG G F V K G+ + +RL R + + EV +
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 347 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTR--KRIAL 404
+ H N++ L T+ +L+ ++ G + L E+ L D T+ K+I
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQI-- 138
Query: 405 GSARGLSYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTA 460
G+ YLH +I H D+K NI LLD+ + DFG+A ++ +
Sbjct: 139 --LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KN 191
Query: 461 VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ GT +APE ++ + D++ G++ L++G F
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G+ +LH IIHRD+K +NI++ + + DFGLA+ + T T +
Sbjct: 136 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS--TNFMMTPYVVTRYYR 190
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE + E D++ G ++ EL+ G F
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 178 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 176 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 122 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 178
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
V V T + APE + E D++ G ++ E+I G F
Sbjct: 179 GTSFMMVPFVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 76 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQH-- 126
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 127 -GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKA 428
L++ M G + S ++ER +G+A + +LH H I HRDVK
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA--IQFLHSH---NIAHRDVKP 156
Query: 429 ANILL-DEEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF 485
N+L +E +AV+ DFG AK + + T T ++APE L K + D++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMW 213
Query: 486 GYGIMLLELITG 497
G+++ L+ G
Sbjct: 214 SLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKA 428
L++ M G + S ++ER +G+A + +LH H I HRDVK
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA--IQFLHSH---NIAHRDVKP 137
Query: 429 ANILL-DEEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF 485
N+L +E +AV+ DFG AK + + T T ++APE L K + D++
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMW 194
Query: 486 GYGIMLLELITG 497
G+++ L+ G
Sbjct: 195 SLGVIMYILLCG 206
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRL---KEERTPGGELQ-FQTEVEMISMA 350
D + ++G+G F V + G AVK + K +PG + + E + M
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H +++ L + +V+ +M + + +R + L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR-GTIG 466
Y HD+ IIHRDVK +LL + + +G FG+A + ++ + R GT
Sbjct: 144 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPH 198
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE + + DV+G G++L L++G F
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 300 NKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGG--ELQFQTEVEMISMAVHRNLLR 357
++ ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIR 91
Query: 358 LRGFCMTPTERLLVYPY-MANGSVASCLRERPPSQLPLDWPTRKR-IAL--GSARGLSYL 413
+C T+R L + N ++ + + S L I+L A G+++L
Sbjct: 92 Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 414 HDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTTA 460
H KIIHRD+K NIL+ E ++ DFGL K +D
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 461 VR---GTIGHIAPEYLSTGKSSEKT---DVFGYGIMLLELIT-GQRAF 501
+ GT G APE L T D+F G + +++ G+ F
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 300 NKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGG--ELQFQTEVEMISMAVHRNLLR 357
++ ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIR 91
Query: 358 LRGFCMTPTERLLVYPY-MANGSVASCLRERPPSQLPLDWPTRKR-IAL--GSARGLSYL 413
+C T+R L + N ++ + + S L I+L A G+++L
Sbjct: 92 Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 414 HDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTTA 460
H KIIHRD+K NIL+ E ++ DFGL K +D
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 461 VR---GTIGHIAPEYLSTGKSSEKT---DVFGYGIMLLELIT-GQRAF 501
+ GT G APE L T D+F G + +++ G+ F
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 408 RGLSYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVRG 463
+ + YLH ++HRD+K +NIL +E E++ + DFG AK + ++ + T
Sbjct: 127 KTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY- 182
Query: 464 TIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T +APE L D++ G++L +TG F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 40/232 (17%)
Query: 300 NKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGG--ELQFQTEVEMISMAVHRNLLR 357
++ ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIR 73
Query: 358 LRGFCMTPTERLLVYPY-MANGSVASCLRERPPSQLPLDWPTRKR-IAL--GSARGLSYL 413
+C T+R L + N ++ + + S L I+L A G+++L
Sbjct: 74 Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 414 HDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTTA 460
H KIIHRD+K NIL+ E ++ DFGL K +D
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 461 VR---GTIGHIAPEYLSTGKS-------SEKTDVFGYGIMLLELIT-GQRAF 501
+ GT G APE L + + D+F G + +++ G+ F
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E+I G F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
Query: 296 DSFSNKNILGRGGFGKVYKG-RLADGSLVAVKRL---KEERTPGGELQ-FQTEVEMISMA 350
D + ++G+G F V + G AVK + K +PG + + E + M
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGL 410
H +++ L + +V+ +M + + +R + L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 411 SYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR-GTIG 466
Y HD+ IIHRDVK +LL + + +G FG+A + ++ + R GT
Sbjct: 146 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPH 200
Query: 467 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+APE + + DV+G G++L L++G F
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 77 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQHG- 128
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 129 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 176 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 36/242 (14%)
Query: 294 ATDSFSNK---------NILGRGGFGKVYKG-RLADGSLVAVKRLKEERTPGG-ELQFQT 342
+TDSFS + ++LG G +V L AVK + E+ PG +
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFR 59
Query: 343 EVEMISMAV-HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKR 401
EVEM+ HRN+L L F LV+ M GS+ S + +R +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR----RHFNELEASV 115
Query: 402 IALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYK----- 453
+ A L +LH + I HRD+K NIL + + + DFGL +
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 454 -DTHVTTAVRGTIGHIAPEYLSTGKSS-----EKTDVFGYGIMLLELITGQRAFDLARLA 507
T G+ ++APE + ++ D++ G++L L++G F + R
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF-VGRCG 231
Query: 508 ND 509
+D
Sbjct: 232 SD 233
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 113 QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 169
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 170 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 38/220 (17%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 96 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQHG- 147
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD------YKDTHVTTAVRGTIGHIAPEY 472
I+H D+K AN L+ + ++ DFG+A M KD+ V GT+ ++ PE
Sbjct: 148 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQV-----GTVNYMPPEA 199
Query: 473 LSTGKSSEKT-----------DVFGYGIMLLELITGQRAF 501
+ SS + DV+ G +L + G+ F
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILL------DEEFEAVVGDFGLAKLMDYK 453
K+I+ GL Y+H C IIH D+K N+L+ + + + D G A +
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WY 188
Query: 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
D H T +++ T + +PE L D++ ++ ELITG F+
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 400 KRIALGSARGLSYLHDHCDPKIIHRDVKAANILL------DEEFEAVVGDFGLAKLMDYK 453
K+I+ GL Y+H C IIH D+K N+L+ + + + D G A +
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WY 188
Query: 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502
D H T +++ T + +PE L D++ ++ ELITG F+
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 113 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 170 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 171 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 171 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 215 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 119 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 175
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 176 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 224
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 178 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 215 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 178 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 177 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 171 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 391 QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450
Q+ LD + G+ +LH IIHRD+K +NI++ + + DFGLA+
Sbjct: 125 QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 181
Query: 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
+ + T T + APE + E D++ G ++ E++ + F
Sbjct: 182 G--TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 468
G+ +LH IIHRD+K +NI++ + + DFGLA+ + T T +
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYR 192
Query: 469 APEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
APE + + D++ G ++ EL+ G F
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIF 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHVTT 459
++G A + YLH I HRDVK N+L + + DFG AK ++ T
Sbjct: 129 SIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 183
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T ++APE L K + D++ G+++ L+ G F
Sbjct: 184 CY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHVTT 459
++G A + YLH I HRDVK N+L + + DFG AK ++ T
Sbjct: 130 SIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 184
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T ++APE L K + D++ G+++ L+ G F
Sbjct: 185 CY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 403 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHVTT 459
++G A + YLH I HRDVK N+L + + DFG AK ++ T
Sbjct: 131 SIGEA--IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 185
Query: 460 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
T ++APE L K + D++ G+++ L+ G F
Sbjct: 186 CY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 304 LGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 360
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 361 FCMTPTERLLVYPYMANGSV--ASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCD 418
+ +T +Y M G++ S L+++ +D RK + +H H
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQHG- 175
Query: 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLSTGK 477
I+H D+K AN L+ + ++ DFG+A M T V + G + ++ PE +
Sbjct: 176 --IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 478 SSEKT-----------DVFGYGIMLLELITGQRAF 501
SS + DV+ G +L + G+ F
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHVTTAVRGTI 465
+ YLH I HRDVK N+L + + DFG AK ++ T T
Sbjct: 127 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TP 181
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L K + D++ G+++ L+ G F
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 409 GLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHVTTAVRGTI 465
+ YLH I HRDVK N+L + + DFG AK ++ T T
Sbjct: 128 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TP 182
Query: 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501
++APE L K + D++ G+++ L+ G F
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,425,512
Number of Sequences: 62578
Number of extensions: 611898
Number of successful extensions: 3978
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 1356
Number of HSP's gapped (non-prelim): 1239
length of query: 621
length of database: 14,973,337
effective HSP length: 105
effective length of query: 516
effective length of database: 8,402,647
effective search space: 4335765852
effective search space used: 4335765852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)