Query 007020
Match_columns 621
No_of_seqs 737 out of 5197
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 15:04:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 7.1E-55 2.4E-59 440.9 19.9 258 296-574 26-303 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 8.5E-55 2.9E-59 438.4 18.5 258 295-574 12-286 (299)
3 4aoj_A High affinity nerve gro 100.0 4.8E-54 1.6E-58 439.0 21.3 257 296-574 41-316 (329)
4 3omv_A RAF proto-oncogene seri 100.0 3.1E-54 1.1E-58 434.3 19.6 262 291-574 31-297 (307)
5 3uim_A Brassinosteroid insensi 100.0 1.1E-52 3.8E-57 432.4 22.9 325 268-592 2-326 (326)
6 4b9d_A Serine/threonine-protei 100.0 2.3E-53 8E-58 433.9 17.5 251 296-570 24-276 (350)
7 4fih_A Serine/threonine-protei 100.0 1.7E-52 6E-57 426.8 22.3 249 296-570 74-323 (346)
8 4ase_A Vascular endothelial gr 100.0 2.1E-53 7.2E-58 437.7 14.5 269 286-574 54-344 (353)
9 4g3f_A NF-kappa-beta-inducing 100.0 4.5E-52 1.6E-56 422.5 20.9 250 296-574 58-313 (336)
10 3hmm_A TGF-beta receptor type- 100.0 5.2E-52 1.8E-56 420.9 19.8 267 296-575 3-295 (303)
11 3fpq_A Serine/threonine-protei 100.0 1.1E-51 3.8E-56 412.7 21.8 245 299-570 29-282 (290)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-52 6E-57 420.4 15.6 248 296-569 32-283 (311)
13 4fie_A Serine/threonine-protei 100.0 2.7E-51 9.2E-56 428.2 24.0 249 296-570 151-400 (423)
14 3hyh_A Carbon catabolite-derep 100.0 3.4E-51 1.2E-55 405.6 21.1 246 296-570 13-262 (275)
15 3ubd_A Ribosomal protein S6 ki 100.0 2.1E-51 7E-56 412.8 12.4 243 296-565 24-271 (304)
16 4g31_A Eukaryotic translation 100.0 1.6E-50 5.5E-55 407.9 17.2 251 296-570 5-279 (299)
17 4b99_A Mitogen-activated prote 100.0 5.4E-47 1.8E-51 396.7 22.6 263 295-570 53-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 1.4E-46 4.9E-51 389.4 20.2 196 294-502 19-248 (361)
19 2qkw_B Protein kinase; three-h 100.0 5.7E-46 2E-50 381.5 24.3 279 290-574 33-312 (321)
20 3uto_A Twitchin; kinase, muscl 100.0 2.1E-45 7.1E-50 403.4 22.6 251 296-570 157-410 (573)
21 3v5w_A G-protein coupled recep 100.0 2.4E-45 8.3E-50 400.0 21.5 249 295-569 188-448 (689)
22 3zgw_A Maternal embryonic leuc 100.0 1.2E-43 4.1E-48 366.7 20.8 251 294-570 8-260 (347)
23 3fxz_A Serine/threonine-protei 100.0 6.8E-43 2.3E-47 354.4 25.4 250 295-570 19-269 (297)
24 2psq_A Fibroblast growth facto 100.0 6.9E-44 2.4E-48 372.9 18.4 260 294-574 79-361 (370)
25 2nru_A Interleukin-1 receptor- 100.0 1.7E-42 5.9E-47 353.1 27.9 283 282-575 11-304 (307)
26 3p86_A Serine/threonine-protei 100.0 2.8E-44 9.5E-49 366.6 13.7 264 288-574 29-295 (309)
27 3s95_A LIMK-1, LIM domain kina 100.0 7E-43 2.4E-47 356.6 23.9 257 295-575 9-280 (310)
28 3kul_A Ephrin type-A receptor 100.0 9.1E-44 3.1E-48 365.5 16.8 257 295-575 48-311 (325)
29 4dc2_A Protein kinase C IOTA t 100.0 5.5E-43 1.9E-47 367.4 22.5 272 294-583 50-329 (396)
30 3vhe_A Vascular endothelial gr 100.0 5.2E-44 1.8E-48 372.8 14.1 270 285-574 11-352 (359)
31 2qol_A Ephrin receptor; recept 100.0 1.4E-43 4.9E-48 370.8 16.4 258 294-575 43-307 (373)
32 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-44 8.1E-49 377.7 10.4 260 291-574 109-371 (377)
33 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.3E-43 1.1E-47 351.1 18.1 257 294-576 6-263 (268)
34 3fe3_A MAP/microtubule affinit 100.0 1E-42 3.5E-47 357.6 21.9 248 295-570 14-264 (328)
35 4hcu_A Tyrosine-protein kinase 100.0 4.5E-43 1.5E-47 350.5 17.8 255 294-574 8-263 (269)
36 4eqm_A Protein kinase; transfe 100.0 5.5E-43 1.9E-47 354.6 18.7 263 295-578 10-276 (294)
37 4euu_A Serine/threonine-protei 100.0 2.2E-42 7.5E-47 354.4 23.3 275 295-579 8-311 (319)
38 3tt0_A Basic fibroblast growth 100.0 5.4E-43 1.9E-47 368.1 18.4 262 293-575 66-350 (382)
39 3tki_A Serine/threonine-protei 100.0 1.2E-42 4.1E-47 356.8 20.4 253 295-570 6-261 (323)
40 1rjb_A FL cytokine receptor; k 100.0 2.5E-43 8.4E-48 365.5 15.3 268 290-577 39-334 (344)
41 1luf_A Muscle-specific tyrosin 100.0 6E-43 2.1E-47 362.3 17.7 266 290-576 41-334 (343)
42 2c30_A Serine/threonine-protei 100.0 8E-42 2.7E-46 350.4 25.7 260 285-570 24-294 (321)
43 1opk_A P150, C-ABL, proto-onco 100.0 2.3E-43 8E-48 382.9 15.0 265 292-581 216-482 (495)
44 2yab_A Death-associated protei 100.0 3.1E-42 1.1E-46 358.4 22.8 252 295-570 11-272 (361)
45 3q4u_A Activin receptor type-1 100.0 1.8E-42 6.2E-47 351.8 20.5 261 294-575 6-300 (301)
46 2ivs_A Proto-oncogene tyrosine 100.0 3.1E-43 1.1E-47 359.7 14.7 264 291-575 18-309 (314)
47 3soc_A Activin receptor type-2 100.0 8.2E-43 2.8E-47 358.1 18.0 269 293-574 21-315 (322)
48 3v8s_A RHO-associated protein 100.0 1.7E-42 5.9E-47 365.6 20.8 261 288-571 61-330 (410)
49 1mp8_A Focal adhesion kinase 1 100.0 2.8E-43 9.6E-48 354.3 13.9 258 292-574 11-273 (281)
50 3l9p_A Anaplastic lymphoma kin 100.0 7.4E-43 2.5E-47 364.8 17.4 260 294-574 69-342 (367)
51 1qcf_A Haematopoetic cell kina 100.0 3.3E-43 1.1E-47 378.1 14.3 263 289-577 181-444 (454)
52 3niz_A Rhodanese family protei 100.0 3.9E-42 1.3E-46 351.2 21.4 264 294-570 19-300 (311)
53 1t46_A HOMO sapiens V-KIT hard 100.0 6.3E-43 2.2E-47 357.3 15.5 264 291-574 18-304 (313)
54 3qd2_B Eukaryotic translation 100.0 2.2E-42 7.6E-47 356.1 19.4 252 295-570 5-325 (332)
55 3lb7_A RAF proto-oncogene seri 100.0 6.3E-42 2.2E-46 348.9 22.2 261 292-574 32-297 (307)
56 3gen_A Tyrosine-protein kinase 100.0 2.9E-43 9.8E-48 354.6 11.9 257 292-574 20-277 (283)
57 3a8x_A Protein kinase C IOTA t 100.0 5.5E-42 1.9E-46 354.7 21.8 252 296-565 9-264 (345)
58 2i1m_A Macrophage colony-stimu 100.0 3.8E-43 1.3E-47 362.4 12.9 265 290-574 40-323 (333)
59 1o6l_A RAC-beta serine/threoni 100.0 5.9E-42 2E-46 353.0 21.6 249 295-570 4-260 (337)
60 3poz_A Epidermal growth factor 100.0 9.1E-43 3.1E-47 358.5 15.4 256 295-575 14-276 (327)
61 1tki_A Titin; serine kinase, m 100.0 1.1E-41 3.7E-46 349.3 23.1 251 295-570 4-257 (321)
62 3op5_A Serine/threonine-protei 100.0 2.3E-42 7.9E-47 361.0 18.5 266 294-574 33-326 (364)
63 2izr_A Casein kinase I isoform 100.0 1.4E-41 4.8E-46 350.2 23.8 258 295-574 8-278 (330)
64 2y0a_A Death-associated protei 100.0 8.8E-42 3E-46 350.9 21.8 252 295-570 10-271 (326)
65 3ugc_A Tyrosine-protein kinase 100.0 1.9E-42 6.4E-47 350.8 16.5 265 294-574 8-288 (295)
66 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.2E-42 1.4E-46 356.4 19.3 246 293-565 20-269 (353)
67 4aw2_A Serine/threonine-protei 100.0 4.9E-42 1.7E-46 364.9 19.8 263 288-570 66-338 (437)
68 3dtc_A Mitogen-activated prote 100.0 2.3E-42 7.9E-47 345.5 16.3 254 295-574 6-270 (271)
69 3c0i_A Peripheral plasma membr 100.0 9.3E-42 3.2E-46 354.4 21.3 256 295-570 23-286 (351)
70 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-42 4.2E-47 373.2 15.1 261 290-576 178-439 (452)
71 3soa_A Calcium/calmodulin-depe 100.0 2.4E-41 8.1E-46 360.9 24.8 254 294-570 9-267 (444)
72 2bdw_A Hypothetical protein K1 100.0 1.8E-41 6.1E-46 353.4 22.9 254 294-571 27-285 (362)
73 3kfa_A Tyrosine-protein kinase 100.0 6.7E-43 2.3E-47 352.7 11.8 261 290-575 7-269 (288)
74 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-42 4.9E-47 355.7 14.3 260 298-574 33-307 (318)
75 2pvf_A Fibroblast growth facto 100.0 6.6E-42 2.3E-46 353.2 19.2 263 292-575 31-316 (334)
76 2pmi_A Negative RE, cyclin-dep 100.0 1.4E-41 4.8E-46 348.1 21.4 266 295-570 4-293 (317)
77 4e5w_A Tyrosine-protein kinase 100.0 5.7E-42 2E-46 348.4 18.4 264 295-574 20-299 (302)
78 2xir_A Vascular endothelial gr 100.0 1.2E-42 4.2E-47 355.6 13.5 270 286-575 17-308 (316)
79 2zv2_A Calcium/calmodulin-depe 100.0 3.8E-42 1.3E-46 349.1 16.9 250 295-570 12-292 (298)
80 3t9t_A Tyrosine-protein kinase 100.0 2.6E-42 8.8E-47 344.4 14.9 255 294-574 6-261 (267)
81 1k9a_A Carboxyl-terminal SRC k 100.0 2.3E-42 7.7E-47 370.9 15.4 252 292-574 189-442 (450)
82 1qpc_A LCK kinase; alpha beta 100.0 3.8E-42 1.3E-46 345.6 16.0 259 290-574 7-266 (279)
83 1csn_A Casein kinase-1; phosph 100.0 5.6E-41 1.9E-45 340.3 24.7 260 294-574 8-280 (298)
84 1ob3_A PFPK5, cell division co 100.0 1.1E-41 3.7E-46 344.1 19.2 262 296-570 2-280 (288)
85 3ork_A Serine/threonine protei 100.0 5.7E-42 2E-46 350.0 17.4 254 295-570 11-273 (311)
86 3qup_A Tyrosine-protein kinase 100.0 3.5E-42 1.2E-46 353.5 15.3 264 290-574 17-295 (323)
87 4fr4_A YANK1, serine/threonine 100.0 5.2E-41 1.8E-45 351.2 24.4 251 295-570 14-271 (384)
88 1p4o_A Insulin-like growth fac 100.0 6.5E-42 2.2E-46 351.3 16.9 269 286-575 15-297 (322)
89 3kex_A Receptor tyrosine-prote 100.0 1.6E-42 5.6E-47 356.4 12.2 257 295-576 12-275 (325)
90 1fot_A TPK1 delta, CAMP-depend 100.0 3.8E-41 1.3E-45 344.4 22.2 246 295-570 5-258 (318)
91 3cc6_A Protein tyrosine kinase 100.0 5.2E-42 1.8E-46 345.0 15.5 257 294-575 10-271 (281)
92 3o0g_A Cell division protein k 100.0 2.9E-41 1E-45 341.5 20.9 263 296-570 2-282 (292)
93 2vd5_A DMPK protein; serine/th 100.0 5.7E-42 1.9E-46 361.9 16.2 263 287-570 52-327 (412)
94 1kob_A Twitchin; kinase, intra 100.0 7.7E-41 2.6E-45 351.0 24.7 253 295-571 50-305 (387)
95 3a62_A Ribosomal protein S6 ki 100.0 3.6E-41 1.2E-45 346.5 21.6 249 295-570 16-276 (327)
96 3is5_A Calcium-dependent prote 100.0 2.7E-41 9.1E-46 340.6 20.0 254 295-570 21-278 (285)
97 4f0f_A Serine/threonine-protei 100.0 1.6E-41 5.5E-46 342.5 18.4 253 295-574 18-286 (287)
98 4eut_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 358.4 19.2 271 295-575 8-307 (396)
99 3og7_A AKAP9-BRAF fusion prote 100.0 2.1E-41 7.3E-46 342.0 19.1 263 292-576 20-287 (289)
100 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-41 5.8E-46 346.5 18.2 247 294-570 55-304 (311)
101 3mdy_A Bone morphogenetic prot 100.0 9.4E-41 3.2E-45 344.8 23.9 269 288-574 29-328 (337)
102 3kmu_A ILK, integrin-linked ki 100.0 7.5E-42 2.6E-46 341.6 15.1 252 295-575 9-268 (271)
103 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.9E-42 2E-46 352.7 14.6 246 296-570 9-258 (336)
104 3gxj_A TGF-beta receptor type- 100.0 9.3E-43 3.2E-47 354.2 8.4 264 295-579 2-299 (303)
105 1xjd_A Protein kinase C, theta 100.0 2.4E-41 8.2E-46 349.4 19.0 251 292-569 13-268 (345)
106 1u59_A Tyrosine-protein kinase 100.0 1.3E-41 4.6E-46 343.1 16.7 255 295-574 8-269 (287)
107 1mqb_A Ephrin type-A receptor 100.0 4E-41 1.4E-45 347.1 20.3 257 295-575 43-307 (333)
108 3dbq_A Dual specificity protei 100.0 8.7E-42 3E-46 353.6 15.0 253 294-571 7-274 (343)
109 3hko_A Calcium/calmodulin-depe 100.0 4.7E-41 1.6E-45 348.4 20.5 262 291-570 21-330 (345)
110 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.9E-41 2E-45 347.6 21.2 245 296-570 41-293 (350)
111 2i0e_A Protein kinase C-beta I 100.0 2.9E-41 1E-45 349.9 18.8 246 293-565 17-266 (353)
112 3llt_A Serine/threonine kinase 100.0 4.4E-41 1.5E-45 350.8 20.2 209 282-502 21-260 (360)
113 2w4o_A Calcium/calmodulin-depe 100.0 7.8E-41 2.7E-45 347.0 21.6 251 294-570 51-305 (349)
114 3lzb_A Epidermal growth factor 100.0 1.2E-41 4.2E-46 350.0 15.4 257 295-576 14-277 (327)
115 3uc3_A Serine/threonine-protei 100.0 2E-41 6.9E-46 353.0 17.2 253 295-571 19-275 (361)
116 2yex_A Serine/threonine-protei 100.0 8.9E-41 3.1E-45 334.9 21.1 253 295-570 6-261 (276)
117 2h8h_A Proto-oncogene tyrosine 100.0 3.6E-42 1.2E-46 377.0 11.8 262 289-576 260-522 (535)
118 3gni_B Strad alpha; kinase fol 100.0 7.5E-41 2.6E-45 352.8 21.3 268 295-571 24-334 (389)
119 3c4z_A Rhodopsin kinase; Ser/T 100.0 4E-41 1.4E-45 365.5 19.5 253 295-566 184-439 (543)
120 1xbb_A Tyrosine-protein kinase 100.0 1.2E-41 4.3E-46 344.1 14.4 257 292-574 12-276 (291)
121 2zmd_A Dual specificity protei 100.0 1.7E-41 6E-46 357.2 16.0 252 295-571 55-321 (390)
122 3kk8_A Calcium/calmodulin depe 100.0 2.5E-40 8.7E-45 333.1 23.7 252 295-570 5-261 (284)
123 2h34_A Serine/threonine-protei 100.0 1.5E-40 5E-45 339.2 22.1 261 295-578 33-297 (309)
124 2r5t_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 350.5 19.2 253 296-575 38-294 (373)
125 3g33_A Cell division protein k 100.0 7.6E-41 2.6E-45 341.2 20.0 265 293-570 6-296 (308)
126 2ozo_A Tyrosine-protein kinase 100.0 1.6E-41 5.5E-46 377.1 16.1 254 296-574 335-595 (613)
127 3c1x_A Hepatocyte growth facto 100.0 1.4E-41 4.7E-46 355.4 14.5 254 297-574 90-352 (373)
128 3f66_A Hepatocyte growth facto 100.0 4.1E-41 1.4E-45 341.4 17.5 255 296-574 25-288 (298)
129 3kn6_A Ribosomal protein S6 ki 100.0 6.9E-41 2.4E-45 344.0 19.3 250 301-570 16-270 (325)
130 2v62_A Serine/threonine-protei 100.0 5.9E-41 2E-45 347.7 18.9 267 295-577 36-328 (345)
131 2eva_A TAK1 kinase - TAB1 chim 100.0 7.1E-41 2.4E-45 341.2 19.1 254 295-575 7-261 (307)
132 2a2a_A Death-associated protei 100.0 1.5E-40 5.1E-45 341.1 21.6 252 295-570 11-272 (321)
133 4agu_A Cyclin-dependent kinase 100.0 1.1E-40 3.9E-45 340.3 20.6 262 296-570 3-284 (311)
134 3pls_A Macrophage-stimulating 100.0 3.9E-41 1.4E-45 341.4 16.9 255 297-574 22-284 (298)
135 1b6c_B TGF-B superfamily recep 100.0 2.3E-40 8E-45 342.7 22.9 268 287-575 33-334 (342)
136 3mtl_A Cell division protein k 100.0 2.8E-41 9.7E-46 346.9 15.9 262 296-570 2-281 (324)
137 2wqm_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 339.9 20.4 261 296-575 32-295 (310)
138 1fvr_A Tyrosine-protein kinase 100.0 2.9E-41 9.9E-46 347.4 15.7 257 295-574 24-297 (327)
139 2qr7_A Ribosomal protein S6 ki 100.0 6.6E-41 2.3E-45 346.2 18.4 252 294-570 20-277 (342)
140 4hgt_A Casein kinase I isoform 100.0 4.5E-40 1.5E-44 333.2 24.1 260 294-574 7-277 (296)
141 4ejn_A RAC-alpha serine/threon 100.0 1E-40 3.6E-45 358.0 20.5 249 295-570 147-404 (446)
142 2x4f_A Myosin light chain kina 100.0 1.7E-40 5.8E-45 347.4 21.6 246 301-570 94-342 (373)
143 3lxl_A Tyrosine-protein kinase 100.0 9.5E-42 3.2E-46 351.0 11.9 267 295-578 22-304 (327)
144 1nxk_A MAP kinase-activated pr 100.0 1E-40 3.5E-45 352.3 20.0 252 296-571 61-322 (400)
145 2eue_A Carbon catabolite derep 100.0 2.2E-40 7.5E-45 332.0 21.3 246 296-570 13-262 (275)
146 3oz6_A Mitogen-activated prote 100.0 2.1E-40 7.3E-45 349.2 22.2 201 293-502 6-232 (388)
147 3uzp_A CKI-delta, CKID, casein 100.0 6.7E-40 2.3E-44 332.0 25.0 259 295-574 8-277 (296)
148 3dls_A PAS domain-containing s 100.0 4.3E-41 1.5E-45 346.9 16.5 244 294-571 22-275 (335)
149 3fdn_A Serine/threonine-protei 100.0 1.9E-40 6.4E-45 333.3 20.7 249 294-571 7-258 (279)
150 2buj_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 345.2 15.4 265 293-577 26-306 (317)
151 3g2f_A Bone morphogenetic prot 100.0 3E-41 1E-45 348.5 15.1 270 294-575 11-316 (336)
152 2y94_A 5'-AMP-activated protei 100.0 1.9E-40 6.4E-45 356.3 21.7 248 295-570 15-266 (476)
153 3a7i_A MST3 kinase, serine/thr 100.0 7.1E-41 2.4E-45 340.6 17.4 250 295-571 21-271 (303)
154 1vzo_A Ribosomal protein S6 ki 100.0 1.8E-41 6.3E-46 352.7 13.1 256 295-572 53-323 (355)
155 2yfx_A Tyrosine-protein kinase 100.0 1.3E-40 4.6E-45 342.4 19.2 261 293-574 27-301 (327)
156 2w5a_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46 341.9 11.0 258 295-574 5-271 (279)
157 2ac3_A MAP kinase-interacting 100.0 9E-41 3.1E-45 341.9 17.4 261 295-570 11-295 (316)
158 2acx_A G protein-coupled recep 100.0 6.9E-41 2.4E-45 364.5 17.5 255 294-570 182-444 (576)
159 3brb_A Proto-oncogene tyrosine 100.0 4.4E-41 1.5E-45 343.7 15.0 265 289-574 27-305 (313)
160 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.5E-40 8.6E-45 345.7 21.0 254 291-574 60-336 (365)
161 1u5q_A Serine/threonine protei 100.0 4.2E-41 1.5E-45 348.6 14.9 247 296-571 54-306 (348)
162 3cok_A Serine/threonine-protei 100.0 1.5E-40 5E-45 333.8 18.4 249 296-570 11-262 (278)
163 4fvq_A Tyrosine-protein kinase 100.0 5.8E-41 2E-45 338.7 15.2 253 295-578 7-276 (289)
164 2jii_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 345.4 18.4 260 295-574 41-333 (352)
165 3f3z_A Calcium/calmodulin-depe 100.0 6.7E-40 2.3E-44 328.8 22.2 250 295-570 8-261 (277)
166 3ll6_A Cyclin G-associated kin 100.0 4.9E-41 1.7E-45 346.8 13.8 257 292-575 24-306 (337)
167 3ttj_A Mitogen-activated prote 100.0 4.6E-40 1.6E-44 353.6 21.8 260 295-570 61-355 (464)
168 1x8b_A WEE1HU, WEE1-like prote 100.0 7.2E-41 2.5E-45 337.4 14.5 247 295-570 10-279 (289)
169 3eqc_A Dual specificity mitoge 100.0 2.5E-40 8.6E-45 345.1 19.1 200 295-503 32-232 (360)
170 3bhy_A Death-associated protei 100.0 8.8E-40 3E-44 329.0 22.4 252 295-570 4-265 (283)
171 2w1i_A JAK2; chromosomal rearr 100.0 2.5E-40 8.5E-45 340.3 18.6 265 294-574 39-319 (326)
172 4fl3_A Tyrosine-protein kinase 100.0 1.2E-40 4.1E-45 371.0 17.1 247 302-574 375-628 (635)
173 3i6u_A CDS1, serine/threonine- 100.0 2.3E-40 7.7E-45 352.1 18.5 254 293-570 132-399 (419)
174 2rku_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 332.0 20.8 249 295-570 14-265 (294)
175 2a19_B Interferon-induced, dou 100.0 4.4E-40 1.5E-44 331.2 19.5 247 294-575 9-272 (284)
176 2owb_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 339.1 20.5 249 295-570 40-291 (335)
177 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-40 5.4E-45 342.1 16.1 263 294-570 32-318 (329)
178 3lm5_A Serine/threonine-protei 100.0 1.2E-39 4E-44 335.3 22.4 261 288-570 20-287 (327)
179 2vwi_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 338.3 15.1 265 291-570 10-287 (303)
180 1byg_A CSK, protein (C-termina 100.0 6.1E-41 2.1E-45 336.6 12.4 250 294-574 19-270 (278)
181 1cm8_A Phosphorylated MAP kina 100.0 1.1E-39 3.7E-44 340.7 22.2 254 295-570 24-307 (367)
182 4aaa_A Cyclin-dependent kinase 100.0 2.4E-40 8.2E-45 341.1 16.9 264 295-570 24-306 (331)
183 1t4h_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 328.8 21.9 248 296-570 26-282 (290)
184 1ua2_A CAK, cell division prot 100.0 7E-40 2.4E-44 339.7 20.1 265 294-571 8-292 (346)
185 2y7j_A Phosphorylase B kinase 100.0 2.3E-39 7.9E-44 338.1 23.9 256 291-570 89-359 (365)
186 3byv_A Rhoptry kinase; malaria 100.0 4.2E-41 1.4E-45 353.2 10.5 244 295-570 72-359 (377)
187 3n9x_A Phosphotransferase; mal 100.0 1.8E-39 6.1E-44 346.7 23.2 200 295-502 25-253 (432)
188 2r3i_A Cell division protein k 100.0 1.3E-39 4.3E-44 330.6 20.7 264 296-570 3-283 (299)
189 3qyz_A Mitogen-activated prote 100.0 9.9E-40 3.4E-44 341.0 20.3 262 295-570 26-313 (364)
190 3nsz_A CK II alpha, casein kin 100.0 1.5E-39 5.3E-44 334.8 21.4 256 295-570 35-319 (330)
191 3pg1_A Mitogen-activated prote 100.0 8.5E-40 2.9E-44 341.3 19.7 270 287-570 13-316 (362)
192 2vgo_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 328.1 20.2 247 295-570 13-262 (284)
193 1u46_A ACK-1, activated CDC42 100.0 8.9E-41 3E-45 337.6 11.7 258 295-576 17-283 (291)
194 3fme_A Dual specificity mitoge 100.0 7.4E-41 2.5E-45 338.0 10.9 256 294-570 5-266 (290)
195 2j0j_A Focal adhesion kinase 1 100.0 3.6E-40 1.2E-44 368.6 17.5 262 289-575 383-649 (656)
196 3rp9_A Mitogen-activated prote 100.0 1.4E-39 4.8E-44 350.6 21.6 195 295-497 52-280 (458)
197 3mwu_A Calmodulin-domain prote 100.0 1.3E-39 4.6E-44 353.3 21.4 252 295-571 21-277 (486)
198 3sv0_A Casein kinase I-like; t 100.0 4.1E-39 1.4E-43 346.5 25.0 262 295-577 6-278 (483)
199 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-39 7.7E-44 353.0 23.2 251 295-570 35-301 (504)
200 3nyv_A Calmodulin-domain prote 100.0 1E-39 3.4E-44 354.2 20.3 252 294-570 24-281 (484)
201 3lij_A Calcium/calmodulin depe 100.0 2.3E-39 7.7E-44 352.1 22.8 251 295-570 36-291 (494)
202 3an0_A Dual specificity mitoge 100.0 1.6E-40 5.3E-45 343.8 12.9 257 293-570 48-310 (340)
203 2clq_A Mitogen-activated prote 100.0 1E-39 3.4E-44 330.6 18.6 253 296-570 22-278 (295)
204 3pfq_A PKC-B, PKC-beta, protei 100.0 1.5E-39 5.1E-44 364.6 21.8 247 292-565 337-587 (674)
205 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-40 5.3E-45 348.1 13.0 255 295-570 61-352 (371)
206 2j7t_A Serine/threonine-protei 100.0 1.4E-39 4.7E-44 330.8 19.6 253 294-570 17-275 (302)
207 3eb0_A Putative uncharacterize 100.0 5.4E-40 1.9E-44 345.4 16.9 265 291-570 2-321 (383)
208 2jam_A Calcium/calmodulin-depe 100.0 1.7E-39 5.9E-44 330.5 20.0 255 295-575 8-268 (304)
209 3com_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 329.2 22.4 252 293-570 26-278 (314)
210 2ycf_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 333.7 19.1 253 294-570 8-274 (322)
211 3mi9_A Cell division protein k 100.0 1.9E-39 6.6E-44 337.2 20.0 263 296-570 17-311 (351)
212 1wak_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 341.9 20.7 266 294-570 35-391 (397)
213 2h6d_A 5'-AMP-activated protei 100.0 1.6E-39 5.3E-44 325.9 18.0 249 294-570 9-261 (276)
214 2xrw_A Mitogen-activated prote 100.0 3.6E-39 1.2E-43 337.5 21.5 256 295-570 24-318 (371)
215 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.4E-41 2.2E-45 343.4 8.0 264 288-577 25-302 (319)
216 2x7f_A TRAF2 and NCK-interacti 100.0 2.5E-40 8.7E-45 340.1 12.0 262 289-575 17-293 (326)
217 2b9h_A MAP kinase FUS3, mitoge 100.0 4.1E-39 1.4E-43 334.9 21.1 262 295-570 10-305 (353)
218 3kvw_A DYRK2, dual specificity 100.0 2.7E-39 9.2E-44 344.7 19.7 197 295-503 96-301 (429)
219 2pml_X PFPK7, Ser/Thr protein 100.0 1.5E-39 5.1E-44 337.5 17.1 259 295-570 30-322 (348)
220 2fst_X Mitogen-activated prote 100.0 2.9E-39 1E-43 337.2 19.3 259 295-571 28-312 (367)
221 2wtk_C Serine/threonine-protei 100.0 2.2E-38 7.6E-43 322.3 25.0 252 295-571 4-264 (305)
222 1phk_A Phosphorylase kinase; g 100.0 1.3E-38 4.6E-43 322.8 22.9 253 294-570 15-283 (298)
223 3cek_A Dual specificity protei 100.0 4.1E-40 1.4E-44 336.6 11.8 257 289-570 21-292 (313)
224 4e7w_A Glycogen synthase kinas 100.0 2.5E-39 8.5E-44 341.3 16.5 262 295-571 39-322 (394)
225 1j1b_A Glycogen synthase kinas 100.0 1.6E-39 5.6E-44 345.6 15.2 260 296-570 54-336 (420)
226 4exu_A Mitogen-activated prote 100.0 1.5E-38 5.2E-43 332.8 22.1 254 295-570 41-323 (371)
227 3rgf_A Cyclin-dependent kinase 100.0 6.6E-39 2.3E-43 339.7 19.3 201 296-503 20-238 (405)
228 1blx_A Cyclin-dependent kinase 100.0 5.9E-39 2E-43 329.8 18.2 264 294-570 9-296 (326)
229 1z57_A Dual specificity protei 100.0 1.6E-38 5.4E-43 328.1 21.2 260 294-570 12-328 (339)
230 2wei_A Calmodulin-domain prote 100.0 2.4E-38 8.2E-43 319.3 20.8 253 293-570 19-276 (287)
231 1zy4_A Serine/threonine-protei 100.0 5.7E-39 1.9E-43 326.0 16.0 251 295-570 5-283 (303)
232 3aln_A Dual specificity mitoge 100.0 2.8E-39 9.5E-44 332.5 13.8 259 294-570 20-285 (327)
233 3e3p_A Protein kinase, putativ 100.0 5E-39 1.7E-43 335.2 15.3 269 290-570 17-314 (360)
234 1q8y_A SR protein kinase; tran 100.0 2.7E-38 9.3E-43 331.2 20.9 264 295-570 18-333 (373)
235 2rio_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 340.6 17.5 252 297-570 16-295 (434)
236 2vx3_A Dual specificity tyrosi 100.0 6.5E-38 2.2E-42 329.5 23.1 201 292-502 50-259 (382)
237 3coi_A Mitogen-activated prote 100.0 5.3E-38 1.8E-42 326.6 22.2 253 295-570 23-305 (353)
238 2i6l_A Mitogen-activated prote 100.0 1.5E-38 5.1E-43 325.7 17.5 258 295-570 10-305 (320)
239 3a99_A Proto-oncogene serine/t 100.0 4.5E-39 1.5E-43 329.9 13.5 247 289-570 36-293 (320)
240 2iwi_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 328.8 12.4 244 292-570 27-283 (312)
241 3fhr_A MAP kinase-activated pr 100.0 1.2E-38 4.2E-43 328.9 15.3 252 295-570 27-287 (336)
242 2eu9_A Dual specificity protei 100.0 1.1E-37 3.6E-42 324.2 20.8 260 294-570 17-333 (355)
243 2dyl_A Dual specificity mitoge 100.0 1E-37 3.5E-42 319.4 20.0 252 295-570 24-283 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 1.5E-38 5.3E-43 349.3 12.9 261 295-568 13-295 (676)
245 3p23_A Serine/threonine-protei 100.0 5.9E-38 2E-42 334.1 15.7 250 294-570 22-283 (432)
246 2pzi_A Probable serine/threoni 100.0 1.8E-37 6.2E-42 349.8 18.1 239 295-574 79-325 (681)
247 3uqc_A Probable conserved tran 100.0 6.4E-37 2.2E-41 308.4 16.3 231 295-577 30-265 (286)
248 2vuw_A Serine/threonine-protei 100.0 2.4E-37 8.1E-42 319.4 12.4 244 294-569 18-329 (336)
249 3m2w_A MAP kinase-activated pr 100.0 3.7E-36 1.3E-40 305.2 16.4 228 296-570 17-256 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 5.2E-37 1.8E-41 325.5 9.2 244 295-570 77-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 2E-30 6.9E-35 284.5 7.5 186 304-501 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.8E-27 1.3E-31 257.1 9.1 185 299-501 339-538 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 5.1E-26 1.7E-30 231.9 11.7 175 20-196 2-186 (313)
254 1zar_A RIO2 kinase; serine kin 99.9 4.1E-24 1.4E-28 213.8 12.2 154 289-475 83-253 (282)
255 3rgz_A Protein brassinosteroid 99.9 4.4E-23 1.5E-27 235.8 10.7 155 17-174 5-191 (768)
256 3e6j_A Variable lymphocyte rec 99.9 9.7E-22 3.3E-26 190.6 13.2 149 51-200 16-175 (229)
257 4ecn_A Leucine-rich repeat pro 99.9 1.2E-22 4.2E-27 231.6 4.4 172 21-197 266-561 (876)
258 2v9t_B SLIT homolog 2 protein 99.8 2.2E-21 7.6E-26 186.8 11.8 149 52-200 9-168 (220)
259 4fcg_A Uncharacterized protein 99.8 3.8E-22 1.3E-26 204.4 5.9 175 20-197 23-219 (328)
260 4eco_A Uncharacterized protein 99.8 4.7E-22 1.6E-26 222.3 7.0 174 22-197 28-318 (636)
261 2o6s_A Variable lymphocyte rec 99.8 1.5E-20 5.3E-25 179.3 13.5 150 51-200 4-164 (208)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 7.8E-21 2.7E-25 183.0 11.0 150 52-201 9-170 (220)
263 1zth_A RIO1 serine protein kin 99.8 1.2E-19 4.1E-24 179.1 12.1 138 297-450 48-219 (258)
264 3oja_A Leucine-rich immune mol 99.8 3.8E-21 1.3E-25 207.7 -1.6 143 54-199 109-252 (487)
265 3m19_A Variable lymphocyte rec 99.8 2.2E-19 7.6E-24 176.6 11.1 131 66-196 36-167 (251)
266 3m19_A Variable lymphocyte rec 99.8 6.8E-19 2.3E-23 173.1 12.8 136 64-199 58-194 (251)
267 3rgz_A Protein brassinosteroid 99.8 2.1E-19 7.2E-24 205.4 10.0 123 86-209 629-751 (768)
268 2o6q_A Variable lymphocyte rec 99.8 1.3E-18 4.6E-23 173.0 11.8 131 66-196 38-169 (270)
269 3rfs_A Internalin B, repeat mo 99.8 2.8E-18 9.6E-23 170.9 13.2 137 64-200 84-221 (272)
270 1p9a_G Platelet glycoprotein I 99.8 2.7E-18 9.1E-23 172.5 13.0 136 64-200 76-211 (290)
271 1w8a_A SLIT protein; signaling 99.8 2.9E-19 9.9E-24 168.2 5.5 129 69-200 12-142 (192)
272 1ogq_A PGIP-2, polygalacturona 99.8 4.6E-19 1.6E-23 180.3 6.1 136 66-203 175-310 (313)
273 2wfh_A SLIT homolog 2 protein 99.7 4.8E-18 1.7E-22 159.8 12.0 129 69-201 14-143 (193)
274 2o6q_A Variable lymphocyte rec 99.7 7E-18 2.4E-22 167.8 13.5 131 65-195 61-192 (270)
275 1w8a_A SLIT protein; signaling 99.7 4E-18 1.4E-22 160.3 10.6 150 52-201 6-166 (192)
276 2o6r_A Variable lymphocyte rec 99.7 1.3E-17 4.4E-22 154.6 10.1 135 52-200 5-140 (177)
277 4g8a_A TOLL-like receptor 4; l 99.7 8.4E-18 2.9E-22 187.9 10.4 133 65-197 52-186 (635)
278 2xot_A Amphoterin-induced prot 99.7 6.4E-18 2.2E-22 175.5 8.5 145 52-196 16-175 (361)
279 4gyi_A RIO2 kinase; protein ki 99.7 7.1E-18 2.4E-22 172.9 8.7 140 296-450 95-265 (397)
280 1ozn_A Reticulon 4 receptor; N 99.7 8.8E-18 3E-22 168.4 8.5 131 65-195 80-212 (285)
281 2ell_A Acidic leucine-rich nuc 99.7 1.3E-17 4.4E-22 153.2 7.3 130 65-196 24-159 (168)
282 3v47_A TOLL-like receptor 5B a 99.7 1.9E-17 6.5E-22 177.5 9.6 137 65-201 275-412 (455)
283 2o6r_A Variable lymphocyte rec 99.7 1.1E-16 3.8E-21 148.3 13.0 114 65-178 28-141 (177)
284 2wfh_A SLIT homolog 2 protein 99.7 6.7E-17 2.3E-21 151.9 10.1 124 52-176 8-141 (193)
285 2xot_A Amphoterin-induced prot 99.7 1.3E-17 4.3E-22 173.2 5.2 138 63-200 62-205 (361)
286 1ozn_A Reticulon 4 receptor; N 99.7 8.6E-17 3E-21 161.2 11.0 132 65-196 32-165 (285)
287 2z62_A TOLL-like receptor 4, v 99.7 6.2E-17 2.1E-21 161.4 9.6 132 65-196 28-161 (276)
288 2z80_A TOLL-like receptor 2, v 99.7 3.7E-17 1.3E-21 169.2 8.3 145 51-196 27-186 (353)
289 2je0_A Acidic leucine-rich nuc 99.7 1.3E-17 4.3E-22 150.0 3.9 127 65-193 17-149 (149)
290 3rfs_A Internalin B, repeat mo 99.7 2.7E-16 9.3E-21 156.4 13.0 132 64-197 62-194 (272)
291 2z66_A Variable lymphocyte rec 99.7 5.2E-17 1.8E-21 164.6 7.8 133 64-196 100-235 (306)
292 2xwt_C Thyrotropin receptor; s 99.7 1.1E-16 3.8E-21 156.0 9.5 130 65-196 31-168 (239)
293 4fcg_A Uncharacterized protein 99.7 1E-16 3.4E-21 164.1 8.8 131 64-197 103-242 (328)
294 3vq2_A TLR4, TOLL-like recepto 99.7 1.6E-16 5.6E-21 176.7 10.8 133 65-197 32-166 (606)
295 1p9a_G Platelet glycoprotein I 99.7 5.2E-16 1.8E-20 155.8 13.4 127 66-195 32-159 (290)
296 2v70_A SLIT-2, SLIT homolog 2 99.7 2.2E-16 7.4E-21 151.8 9.6 115 64-178 56-170 (220)
297 2z81_A CD282 antigen, TOLL-lik 99.6 1E-16 3.5E-21 176.1 8.3 143 53-196 3-160 (549)
298 3oja_B Anopheles plasmodium-re 99.6 1.4E-16 4.7E-21 176.8 9.1 155 41-196 7-183 (597)
299 2v9t_B SLIT homolog 2 protein 99.6 3.4E-16 1.2E-20 150.4 10.7 126 68-196 14-140 (220)
300 3e6j_A Variable lymphocyte rec 99.6 4.7E-16 1.6E-20 150.5 11.8 134 56-196 14-147 (229)
301 3o6n_A APL1; leucine-rich repe 99.6 1.5E-16 5.3E-21 166.9 8.8 132 65-196 45-177 (390)
302 3v47_A TOLL-like receptor 5B a 99.6 1.1E-16 3.7E-21 171.7 7.5 145 52-196 6-166 (455)
303 3zyj_A Leucine-rich repeat-con 99.6 3.5E-16 1.2E-20 166.9 10.2 135 65-201 136-296 (440)
304 2id5_A Lingo-1, leucine rich r 99.6 3E-16 1E-20 169.3 9.7 132 65-196 32-164 (477)
305 3vq2_A TLR4, TOLL-like recepto 99.6 1.1E-16 3.9E-21 178.0 6.6 137 65-201 424-562 (606)
306 3zyi_A Leucine-rich repeat-con 99.6 3.8E-16 1.3E-20 167.3 10.1 141 56-196 56-208 (452)
307 4b8c_D Glucose-repressible alc 99.6 2.2E-16 7.5E-21 178.3 8.5 174 21-197 129-329 (727)
308 3j0a_A TOLL-like receptor 5; m 99.6 2.9E-16 9.8E-21 181.3 9.6 133 65-201 426-564 (844)
309 2z66_A Variable lymphocyte rec 99.6 1.9E-16 6.4E-21 160.4 7.1 144 52-196 5-162 (306)
310 4g8a_A TOLL-like receptor 4; l 99.6 2.4E-16 8.3E-21 176.0 8.3 138 64-201 444-584 (635)
311 3o53_A Protein LRIM1, AGAP0063 99.6 2.5E-16 8.5E-21 160.4 7.4 141 56-199 111-252 (317)
312 2z62_A TOLL-like receptor 4, v 99.6 7.8E-16 2.7E-20 153.4 10.5 136 65-200 76-240 (276)
313 2o6s_A Variable lymphocyte rec 99.6 7.2E-16 2.5E-20 146.8 9.3 127 64-196 51-177 (208)
314 3zyi_A Leucine-rich repeat-con 99.6 6.7E-16 2.3E-20 165.4 10.0 136 64-201 146-307 (452)
315 1a9n_A U2A', U2A'; complex (nu 99.6 3.2E-16 1.1E-20 145.0 6.0 128 64-196 18-152 (176)
316 3t6q_A CD180 antigen; protein- 99.6 7.2E-16 2.5E-20 171.5 10.0 133 65-197 33-166 (606)
317 3zyj_A Leucine-rich repeat-con 99.6 1.3E-15 4.3E-20 162.6 10.6 141 56-196 45-197 (440)
318 4ezg_A Putative uncharacterize 99.6 5.2E-16 1.8E-20 146.4 6.6 126 65-195 66-192 (197)
319 3g39_A Variable lymphocyte rec 99.6 2.9E-15 9.8E-20 137.7 10.6 109 68-179 12-120 (170)
320 3j0a_A TOLL-like receptor 5; m 99.6 9.4E-16 3.2E-20 177.0 9.1 142 54-196 14-160 (844)
321 1ziw_A TOLL-like receptor 3; i 99.6 2.3E-15 7.8E-20 169.8 11.7 132 65-196 25-157 (680)
322 2ft3_A Biglycan; proteoglycan, 99.6 3.1E-15 1.1E-19 153.3 11.4 141 52-196 31-184 (332)
323 2z63_A TOLL-like receptor 4, v 99.6 1.3E-15 4.4E-20 168.1 8.4 136 65-200 396-534 (570)
324 2r9u_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 137.0 10.6 109 68-179 15-123 (174)
325 4ezg_A Putative uncharacterize 99.6 1.1E-15 3.6E-20 144.3 6.3 128 64-196 43-171 (197)
326 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 4E-15 1.4E-19 163.9 11.3 137 63-199 351-512 (562)
327 3g39_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 136.4 9.7 108 90-200 10-118 (170)
328 1ziw_A TOLL-like receptor 3; i 99.6 1.9E-15 6.4E-20 170.6 8.7 137 65-201 480-626 (680)
329 2xwt_C Thyrotropin receptor; s 99.6 2.3E-15 7.8E-20 146.6 8.1 130 64-195 54-190 (239)
330 2id5_A Lingo-1, leucine rich r 99.6 1.8E-15 6.1E-20 163.2 8.0 133 64-196 55-188 (477)
331 2z7x_B TOLL-like receptor 1, v 99.6 3E-15 1E-19 163.3 9.9 137 63-199 322-483 (520)
332 1dce_A Protein (RAB geranylger 99.6 2.8E-15 9.6E-20 164.2 9.1 121 66-191 442-567 (567)
333 2z80_A TOLL-like receptor 2, v 99.6 2.7E-15 9.3E-20 155.1 8.4 133 64-196 75-210 (353)
334 1xku_A Decorin; proteoglycan, 99.6 3.2E-15 1.1E-19 153.0 8.8 142 52-196 29-183 (330)
335 2r9u_A Variable lymphocyte rec 99.6 7.5E-15 2.6E-19 135.4 10.1 107 91-200 14-121 (174)
336 3t6q_A CD180 antigen; protein- 99.6 1.1E-15 3.7E-20 170.0 5.4 135 65-200 425-563 (606)
337 2z63_A TOLL-like receptor 4, v 99.6 3E-15 1E-19 165.2 8.3 132 65-196 28-161 (570)
338 3o6n_A APL1; leucine-rich repe 99.6 7.1E-15 2.4E-19 154.2 10.8 130 65-196 69-198 (390)
339 3oja_B Anopheles plasmodium-re 99.6 6.5E-15 2.2E-19 163.3 10.9 131 64-196 74-204 (597)
340 1wwl_A Monocyte differentiatio 99.6 5.6E-16 1.9E-20 157.4 1.6 129 66-195 96-239 (312)
341 2ft3_A Biglycan; proteoglycan, 99.5 1.4E-14 4.9E-19 148.4 11.2 130 66-195 124-275 (332)
342 4glp_A Monocyte differentiatio 99.5 3.7E-15 1.3E-19 151.2 6.6 129 65-196 145-284 (310)
343 1wwl_A Monocyte differentiatio 99.5 2.4E-15 8.1E-20 152.8 4.9 132 64-196 120-265 (312)
344 4eco_A Uncharacterized protein 99.5 1.5E-15 5.3E-20 169.5 3.9 143 54-197 193-366 (636)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 6.8E-15 2.3E-19 162.1 8.5 127 65-196 52-181 (562)
346 1h6t_A Internalin B; cell adhe 99.5 1.6E-14 5.6E-19 144.9 10.3 124 64-196 67-190 (291)
347 1xeu_A Internalin C; cellular 99.5 1.4E-14 4.8E-19 143.1 9.2 126 64-199 62-187 (263)
348 1h6t_A Internalin B; cell adhe 99.5 1.7E-14 6E-19 144.7 9.9 127 63-198 88-214 (291)
349 1xku_A Decorin; proteoglycan, 99.5 1.9E-14 6.6E-19 147.2 10.3 128 65-195 121-251 (330)
350 4ecn_A Leucine-rich repeat pro 99.5 3.9E-15 1.3E-19 169.9 5.5 142 54-197 435-608 (876)
351 1h6u_A Internalin H; cell adhe 99.5 1.6E-14 5.6E-19 146.2 8.9 125 64-197 84-208 (308)
352 4glp_A Monocyte differentiatio 99.5 9.1E-15 3.1E-19 148.3 6.5 128 64-196 168-306 (310)
353 2ell_A Acidic leucine-rich nuc 99.5 1.3E-14 4.5E-19 132.9 6.1 114 64-179 48-165 (168)
354 2z81_A CD282 antigen, TOLL-lik 99.5 1.8E-14 6.1E-19 158.2 8.2 132 64-195 49-183 (549)
355 1h6u_A Internalin H; cell adhe 99.5 4.3E-14 1.5E-18 143.1 10.2 124 64-196 62-185 (308)
356 2z7x_B TOLL-like receptor 1, v 99.5 1E-14 3.5E-19 159.1 5.8 127 65-196 21-150 (520)
357 1xeu_A Internalin C; cellular 99.5 3.6E-14 1.2E-18 140.2 9.2 124 64-197 40-163 (263)
358 3oja_A Leucine-rich immune mol 99.5 1.6E-14 5.3E-19 155.9 6.8 125 67-196 101-226 (487)
359 2ifg_A High affinity nerve gro 99.5 2E-14 6.7E-19 148.3 7.2 110 54-177 8-119 (347)
360 3cvr_A Invasion plasmid antige 99.5 1.3E-14 4.6E-19 158.1 5.9 134 43-196 33-172 (571)
361 1ds9_A Outer arm dynein; leuci 99.5 3.2E-16 1.1E-20 148.0 -7.6 128 66-198 19-154 (198)
362 1m9s_A Internalin B; cell inva 99.5 9.8E-14 3.3E-18 152.9 10.6 123 64-195 64-186 (605)
363 4fmz_A Internalin; leucine ric 99.5 4.7E-14 1.6E-18 145.3 7.6 122 66-195 200-322 (347)
364 1m9s_A Internalin B; cell inva 99.5 1E-13 3.4E-18 152.8 10.1 127 63-198 85-211 (605)
365 2je0_A Acidic leucine-rich nuc 99.4 2.4E-14 8.3E-19 128.4 3.7 108 87-196 15-125 (149)
366 3o53_A Protein LRIM1, AGAP0063 99.4 4.3E-14 1.5E-18 143.8 5.6 126 66-196 100-226 (317)
367 4ay9_X Follicle-stimulating ho 99.4 1.3E-13 4.5E-18 142.2 9.4 144 53-196 8-166 (350)
368 4b8c_D Glucose-repressible alc 99.4 5.6E-14 1.9E-18 158.6 7.1 129 64-196 223-353 (727)
369 1o6v_A Internalin A; bacterial 99.4 3.2E-13 1.1E-17 145.1 9.8 123 65-196 243-365 (466)
370 2ifg_A High affinity nerve gro 99.4 2.2E-13 7.6E-18 140.3 7.3 108 92-201 11-120 (347)
371 1a9n_A U2A', U2A'; complex (nu 99.4 7.6E-14 2.6E-18 129.0 3.4 108 65-176 42-155 (176)
372 3cvr_A Invasion plasmid antige 99.4 3.6E-13 1.2E-17 146.8 9.0 99 64-178 99-197 (571)
373 1o6v_A Internalin A; bacterial 99.4 6.7E-13 2.3E-17 142.5 9.4 125 64-197 220-344 (466)
374 1dce_A Protein (RAB geranylger 99.4 5.3E-14 1.8E-18 154.1 0.4 103 90-197 442-546 (567)
375 1ds9_A Outer arm dynein; leuci 99.4 4.1E-15 1.4E-19 140.4 -7.6 125 64-195 47-183 (198)
376 3bz5_A Internalin-J, INLJ; leu 99.4 2.1E-12 7.3E-17 138.0 11.4 120 64-196 41-160 (457)
377 4fmz_A Internalin; leucine ric 99.3 9.6E-13 3.3E-17 135.5 8.0 123 65-196 177-299 (347)
378 3g06_A SSPH2 (leucine-rich rep 99.3 6E-13 2.1E-17 146.8 4.0 135 43-196 12-153 (622)
379 3bz5_A Internalin-J, INLJ; leu 99.3 6.3E-12 2.2E-16 134.3 11.4 128 56-196 97-224 (457)
380 3tm0_A Aminoglycoside 3'-phosp 99.3 1.5E-11 5.1E-16 121.3 12.3 144 295-449 13-213 (263)
381 3g06_A SSPH2 (leucine-rich rep 99.2 9.2E-12 3.1E-16 137.4 9.5 52 137-195 221-272 (622)
382 2ca6_A RAN GTPase-activating p 99.2 1.5E-13 5.2E-18 143.8 -4.6 131 65-195 159-314 (386)
383 1jl5_A Outer protein YOPM; leu 99.2 1.7E-11 5.9E-16 130.8 11.1 117 65-196 111-227 (454)
384 4ay9_X Follicle-stimulating ho 99.2 9.1E-12 3.1E-16 128.4 8.6 125 69-196 13-140 (350)
385 2ast_B S-phase kinase-associat 99.2 1.6E-13 5.6E-18 140.6 -4.7 130 65-195 70-206 (336)
386 3goz_A Leucine-rich repeat-con 99.2 4.8E-13 1.6E-17 138.7 -1.9 132 65-196 22-179 (362)
387 2ast_B S-phase kinase-associat 99.2 3E-13 1E-17 138.6 -3.9 133 64-196 92-234 (336)
388 1nd4_A Aminoglycoside 3'-phosp 99.2 3.2E-11 1.1E-15 118.6 10.5 129 305-449 29-214 (264)
389 2ca6_A RAN GTPase-activating p 99.2 3.4E-13 1.2E-17 141.1 -4.3 131 65-195 94-255 (386)
390 1jl5_A Outer protein YOPM; leu 99.2 5.7E-11 1.9E-15 126.8 10.6 117 65-196 91-207 (454)
391 3goz_A Leucine-rich repeat-con 99.2 2E-12 6.7E-17 134.1 -1.1 128 69-196 2-150 (362)
392 3dxp_A Putative acyl-COA dehyd 99.1 2.6E-10 8.9E-15 117.9 13.0 142 301-449 43-248 (359)
393 3sg8_A APH(2'')-ID; antibiotic 99.0 3E-10 1E-14 114.5 7.8 186 301-501 25-287 (304)
394 1z7x_W Ribonuclease inhibitor; 99.0 2.8E-12 9.5E-17 137.4 -8.4 111 65-175 227-355 (461)
395 1z7x_W Ribonuclease inhibitor; 98.9 2.5E-11 8.6E-16 129.9 -5.3 132 64-195 112-267 (461)
396 3sb4_A Hypothetical leucine ri 98.9 8.8E-10 3E-14 112.4 6.0 57 136-193 225-283 (329)
397 3un9_A NLR family member X1; l 98.9 1.9E-11 6.5E-16 126.7 -6.8 132 65-196 101-251 (372)
398 3sb4_A Hypothetical leucine ri 98.9 1.9E-09 6.3E-14 110.0 7.0 130 64-196 100-309 (329)
399 3rw6_A Nuclear RNA export fact 98.8 9.3E-11 3.2E-15 114.4 -6.3 67 110-178 167-237 (267)
400 3un9_A NLR family member X1; l 98.7 6.2E-10 2.1E-14 115.2 -2.8 112 65-176 126-254 (372)
401 3r70_A Aminoglycoside phosphot 98.6 1.7E-07 5.9E-12 94.9 12.7 137 297-450 38-238 (320)
402 3rw6_A Nuclear RNA export fact 98.6 3E-09 1E-13 103.8 -0.8 80 86-167 167-257 (267)
403 3ogk_B Coronatine-insensitive 98.6 8.7E-09 3E-13 113.8 0.8 84 111-195 218-304 (592)
404 3ogk_B Coronatine-insensitive 98.6 1.2E-09 4.1E-14 120.8 -6.5 131 65-195 378-524 (592)
405 3d1u_A Putative fructosamine-3 98.5 5.6E-07 1.9E-11 89.4 11.9 142 300-448 19-215 (288)
406 1io0_A Tropomodulin; LRR prote 98.5 5.4E-09 1.8E-13 96.9 -3.1 111 64-174 35-164 (185)
407 4gkh_A Aminoglycoside 3'-phosp 98.5 1.3E-06 4.5E-11 86.0 13.5 135 303-449 31-223 (272)
408 3tdw_A Gentamicin resistance p 98.4 1.9E-06 6.4E-11 86.5 13.5 136 301-449 24-224 (306)
409 2p1m_B Transport inhibitor res 98.3 1.1E-08 3.8E-13 112.9 -5.9 129 66-195 373-517 (594)
410 1io0_A Tropomodulin; LRR prote 98.3 1E-08 3.5E-13 95.0 -5.3 118 78-195 25-162 (185)
411 3ovc_A Hygromycin-B 4-O-kinase 98.3 4.2E-06 1.4E-10 86.1 12.4 142 301-449 46-243 (362)
412 4fdw_A Leucine rich hypothetic 98.2 2.3E-06 7.8E-11 89.3 9.6 125 66-196 158-283 (401)
413 4fdw_A Leucine rich hypothetic 98.2 1.5E-06 5.3E-11 90.6 7.6 126 65-196 226-357 (401)
414 2p1m_B Transport inhibitor res 98.2 3E-08 1E-12 109.4 -5.7 86 87-172 103-195 (594)
415 3ats_A Putative uncharacterize 98.2 2.4E-06 8.4E-11 87.7 8.4 81 302-382 26-122 (357)
416 2ra8_A Uncharacterized protein 98.2 1.8E-07 6.2E-12 96.0 -0.6 128 64-195 171-318 (362)
417 2ra8_A Uncharacterized protein 98.0 4.1E-07 1.4E-11 93.3 -1.5 113 64-176 192-322 (362)
418 2q83_A YTAA protein; 2635576, 98.0 3.3E-05 1.1E-09 78.6 12.6 142 302-449 38-252 (346)
419 2olc_A MTR kinase, methylthior 98.0 3.1E-05 1.1E-09 80.6 11.4 76 301-378 35-120 (397)
420 3jr1_A Putative fructosamine-3 97.8 0.00014 4.9E-09 72.7 12.8 139 301-445 41-232 (312)
421 3e4g_A ATP synthase subunit S, 97.8 3.9E-06 1.3E-10 75.9 0.1 58 66-123 62-124 (176)
422 3f7w_A Putative fructosamine-3 97.7 9.9E-05 3.4E-09 73.1 10.3 80 296-380 15-97 (288)
423 3e4g_A ATP synthase subunit S, 97.7 6.4E-06 2.2E-10 74.5 1.0 93 82-174 54-153 (176)
424 2pyw_A Uncharacterized protein 97.7 0.00022 7.4E-09 74.8 12.6 79 419-498 232-313 (420)
425 3dxq_A Choline/ethanolamine ki 97.4 0.00055 1.9E-08 68.2 10.3 71 301-380 23-95 (301)
426 4h09_A Hypothetical leucine ri 97.4 0.00044 1.5E-08 71.3 9.5 137 66-206 218-355 (379)
427 4gt6_A Cell surface protein; l 97.4 0.00016 5.4E-09 75.2 6.1 116 77-196 253-369 (394)
428 3csv_A Aminoglycoside phosphot 97.3 0.00091 3.1E-08 67.6 11.0 142 302-449 24-217 (333)
429 1pgv_A TMD-1, tropomodulin TMD 97.3 1.6E-05 5.6E-10 73.1 -2.7 62 65-126 41-111 (197)
430 4gt6_A Cell surface protein; l 97.2 0.00036 1.2E-08 72.4 6.5 124 65-194 265-388 (394)
431 1zyl_A Hypothetical protein YI 97.2 0.0033 1.1E-07 63.2 13.4 143 302-449 32-223 (328)
432 4h09_A Hypothetical leucine ri 97.2 0.00052 1.8E-08 70.8 7.4 111 65-179 240-350 (379)
433 2ppq_A HSK, HK, homoserine kin 97.2 0.0029 9.9E-08 63.4 12.7 159 287-449 8-217 (322)
434 3rfe_A Platelet glycoprotein I 97.2 0.00047 1.6E-08 59.2 5.6 56 69-126 12-68 (130)
435 1nw1_A Choline kinase (49.2 KD 97.1 0.001 3.4E-08 69.8 9.1 72 302-380 79-159 (429)
436 3rfe_A Platelet glycoprotein I 97.1 0.00045 1.5E-08 59.3 5.2 56 93-150 12-68 (130)
437 4fs7_A Uncharacterized protein 97.1 0.00099 3.4E-08 69.1 8.7 137 65-207 71-208 (394)
438 4fs7_A Uncharacterized protein 97.1 0.00076 2.6E-08 70.0 7.5 84 108-194 292-376 (394)
439 3feg_A Choline/ethanolamine ki 97.1 0.003 1E-07 64.8 11.5 142 302-449 56-254 (379)
440 3c5i_A Choline kinase; choline 96.9 0.0026 8.9E-08 65.2 9.4 73 302-380 39-121 (369)
441 2qg7_A Ethanolamine kinase PV0 96.9 0.0037 1.3E-07 65.9 10.5 73 302-380 114-188 (458)
442 3i1a_A Spectinomycin phosphotr 96.8 0.0061 2.1E-07 61.6 11.5 31 419-449 206-236 (339)
443 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00012 4E-09 67.4 -3.1 114 81-194 33-167 (197)
444 2yle_A Protein spire homolog 1 96.2 0.061 2.1E-06 49.7 12.6 101 378-498 33-133 (229)
445 2ks1_B Epidermal growth factor 95.8 0.0057 2E-07 40.5 2.9 34 232-265 9-42 (44)
446 3f2s_A CK, chetk-alpha, cholin 95.6 0.037 1.3E-06 56.9 9.6 144 302-449 58-280 (401)
447 2l2t_A Receptor tyrosine-prote 95.3 0.0087 3E-07 39.5 2.3 35 231-265 7-41 (44)
448 3mes_A Choline kinase; malaria 95.1 0.044 1.5E-06 56.9 8.1 73 302-380 76-157 (424)
449 3g15_A CK, chetk-alpha, cholin 91.6 0.12 4E-06 53.4 4.1 30 420-449 245-280 (401)
450 4ann_A ESSB; membrane protein, 89.9 0.54 1.9E-05 43.3 6.4 116 351-502 43-158 (215)
451 2jwa_A Receptor tyrosine-prote 88.4 0.13 4.6E-06 33.8 0.8 28 236-264 14-41 (44)
452 2k1k_A Ephrin type-A receptor 86.4 0.26 9E-06 31.5 1.4 28 234-261 11-38 (38)
453 4ano_A ESSB; membrane protein, 85.5 1.6 5.6E-05 40.3 6.8 115 351-502 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 80.2 0.21 7E-06 52.6 -1.7 61 300-363 146-214 (463)
455 2k9y_A Ephrin type-A receptor 80.1 0.44 1.5E-05 31.1 0.5 29 233-261 12-40 (41)
456 1iij_A ERBB-2 receptor protein 66.9 0.37 1.3E-05 29.9 -2.2 26 235-261 9-34 (35)
457 2l9u_A Receptor tyrosine-prote 65.8 1.1 3.7E-05 27.2 -0.3 28 235-262 7-34 (40)
458 2lz0_A Uncharacterized protein 55.1 24 0.00084 27.8 5.9 16 107-122 14-29 (100)
459 2lz0_A Uncharacterized protein 50.6 27 0.00091 27.5 5.4 50 74-124 5-54 (100)
460 3ls8_A Phosphatidylinositol 3- 50.3 1E+02 0.0035 33.0 11.4 46 396-448 454-501 (614)
461 2x6h_A GH13170P, VPS34, phosph 37.7 1.6E+02 0.0055 32.0 10.7 45 397-448 529-575 (696)
462 1cja_A Protein (actin-fragmin 28.9 2E+02 0.0068 28.1 8.7 77 367-449 156-237 (342)
463 2l8s_A Integrin alpha-1; trans 27.9 32 0.0011 23.6 2.0 20 234-253 10-29 (54)
464 2li5_B Ubiquitin-like modifier 21.6 19 0.00065 20.8 -0.0 25 588-612 9-33 (34)
465 2knc_A Integrin alpha-IIB; tra 20.6 64 0.0022 22.2 2.4 20 234-253 13-32 (54)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.1e-55 Score=440.94 Aligned_cols=258 Identities=24% Similarity=0.387 Sum_probs=211.7
Q ss_pred cCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
+++...+.||+|+||+||+|.+. +++.||||+++.........+|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34556788999999999999862 467899999987665556678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC
Q 007020 370 LVYPYMANGSVASCLRERPPS------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF 437 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 437 (621)
+|||||++|+|.++|...... ...++|..+..|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 999999999999999754321 23589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHH
Q 007020 438 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLL 515 (621)
Q Consensus 438 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~ 515 (621)
.+||+|||+|+.....+. .......||+.|||||++.++.++.++|||||||++|||+| |..||.... ..
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--------~~ 254 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQ 254 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--------HH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--------HH
Confidence 999999999987654332 23345679999999999999999999999999999999999 899995221 11
Q ss_pred HHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 516 DWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 516 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+.+..+...... ..+..++..+.+++..||+.||++||||+||++.|+.
T Consensus 255 ~~~~~i~~~~~~----------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 255 DVVEMIRNRQVL----------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCC----------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 222222221111 1122345779999999999999999999999999986
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.5e-55 Score=438.45 Aligned_cols=258 Identities=25% Similarity=0.417 Sum_probs=211.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
.++|.+.+.||+|+||+||+|++. ++..||||+++.. ......+|.+|++++++++|||||+++|+|.+++..
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 356778899999999999999863 4778999999754 345567899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcE
Q 007020 369 LLVYPYMANGSVASCLRERP---------PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEA 439 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 439 (621)
++|||||++|+|.++++... .....++|..+..|+.||++||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997642 2234599999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecccCCCee-eecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHH
Q 007020 440 VVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDW 517 (621)
Q Consensus 440 kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 517 (621)
||+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+.
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--------~~~~ 239 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEV 239 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHH
Confidence 999999998765433322 233569999999999999999999999999999999999 899996321 1122
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+......... ..+..++.++.+++..||+.||++|||+++|++.|++
T Consensus 240 ~~~i~~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 240 IECITQGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHcCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2222222111 1122334678999999999999999999999999876
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.8e-54 Score=438.99 Aligned_cols=257 Identities=28% Similarity=0.451 Sum_probs=204.5
Q ss_pred cCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
++|.+.+.||+|+||+||+|++. +++.||||+++.. ......+|.+|++++++++|||||+++|+|.+++..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45677789999999999999853 4788999999754 3455678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc
Q 007020 370 LVYPYMANGSVASCLRERPP-----------SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 438 (621)
+|||||++|+|.++++.... ...+++|.++..|+.||++||+|||++ +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999986432 123589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHH
Q 007020 439 AVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLD 516 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~ 516 (621)
+||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--------~~~ 268 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--------NTE 268 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--------HHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--------HHH
Confidence 99999999987644332 23345679999999999999999999999999999999999 899996221 112
Q ss_pred HHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 517 WVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 517 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.+..+...... . .+..++.++.+++..||+.||++||||+||+++|+.
T Consensus 269 ~~~~i~~g~~~------~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~ 316 (329)
T 4aoj_A 269 AIDCITQGREL------E----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316 (329)
T ss_dssp HHHHHHHTCCC------C----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHcCCCC------C----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 22222222111 1 122334678999999999999999999999999976
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-54 Score=434.33 Aligned_cols=262 Identities=27% Similarity=0.437 Sum_probs=205.1
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
|++..+++.+.+.||+|+||+||+|++.+ .||||+++... .......|.+|+.++++++|||||+++|++.+ +..+
T Consensus 31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~ 107 (307)
T 3omv_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA 107 (307)
T ss_dssp CBCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred cEEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence 44556788889999999999999999753 59999997544 33445679999999999999999999998864 5689
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+|||||++|+|.++++... .++++..+..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.
T Consensus 108 iVmEy~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EEEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred EEEEcCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 9999999999999997643 2489999999999999999999999 999999999999999999999999999987
Q ss_pred cccCC-Ceeeecccccccccchhhhcc---CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 450 MDYKD-THVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 450 ~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
..... ........||+.|||||++.+ ..++.++|||||||++|||+||+.||.... . ...+.......
T Consensus 182 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----~---~~~~~~~~~~~ 253 (307)
T 3omv_A 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----N---RDQIIFMVGRG 253 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----C---HHHHHHHHHTT
T ss_pred cccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----h---HHHHHHHHhcC
Confidence 65322 233445679999999999964 358999999999999999999999996221 1 11111111111
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
...|.+. ....+++..+.+++..||+.||++||||.||++.|+.
T Consensus 254 ----~~~p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 254 ----YASPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp ----CCCCCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred ----CCCCCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111111 1122345678999999999999999999999998865
No 5
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-52 Score=432.43 Aligned_cols=325 Identities=93% Similarity=1.412 Sum_probs=274.9
Q ss_pred ccCCCCCCcccccCcccccCHHHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHH
Q 007020 268 FDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMI 347 (621)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l 347 (621)
++.+.++++....+..+.++..+++...++|+..+.||+|+||+||+|...+|+.||||+++..........+.+|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l 81 (326)
T 3uim_A 2 FDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMI 81 (326)
T ss_dssp -------------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGG
T ss_pred CCCCcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHH
Confidence 34566778888888999999999999999999999999999999999998889999999997665444444789999999
Q ss_pred HhccCCceeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 007020 348 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVK 427 (621)
Q Consensus 348 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 427 (621)
+.++||||+++++++.+++..++||||+++|+|.+++........++++..+..++.|++.||+|||+.+.++|+|||||
T Consensus 82 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlk 161 (326)
T 3uim_A 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161 (326)
T ss_dssp GTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCS
T ss_pred HhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCc
Confidence 99999999999999999999999999999999999999876666679999999999999999999999877789999999
Q ss_pred CCCeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccccccc
Q 007020 428 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLA 507 (621)
Q Consensus 428 ~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~ 507 (621)
|+|||++.++.+||+|||+++..............||+.|+|||++.+..++.++||||||+++|+|++|+.||+.....
T Consensus 162 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp GGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred hhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 99999999999999999999987665555566667999999999999989999999999999999999999999877666
Q ss_pred CCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCCccchhhhhHh
Q 007020 508 NDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKV 587 (621)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~~~~~~~~ 587 (621)
........+|+...........+.+.........+....+.+++..||+.||++|||+++|+++|++..+.+.|.+|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 321 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKE 321 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-----
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHH
Confidence 77777888999988888888888888888888889999999999999999999999999999999999999999998887
Q ss_pred Hhhhh
Q 007020 588 EVLRQ 592 (621)
Q Consensus 588 ~~~~~ 592 (621)
+..+|
T Consensus 322 ~~~~q 326 (326)
T 3uim_A 322 EMFRQ 326 (326)
T ss_dssp -----
T ss_pred HhhcC
Confidence 77664
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.3e-53 Score=433.93 Aligned_cols=251 Identities=22% Similarity=0.350 Sum_probs=203.5
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
++|++.+.||+|+||+||+|++. +|+.||||+++.... ......+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 67999999999999999999864 799999999976543 3445679999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
||+||+|.++|.... ...+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999997643 23478899999999999999999999 9999999999999999999999999999875432
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCc
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDP 533 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 533 (621)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||.... ..+.+..+..... +
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~~------~ 243 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------MKNLVLKIISGSF------P 243 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTCC------C
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCCC------C
Confidence 122344679999999999999999999999999999999999999996321 2223333322211 1
Q ss_pred cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 534 DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 534 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ....+.++.+++..||+.||++|||++|+++
T Consensus 244 ~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PV----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 1122367889999999999999999999975
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.7e-52 Score=426.80 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=206.4
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
+.|+..+.||+|+||+||+|++. +|+.||||++..... .....+.+|+.+++.++|||||++++++.+++..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 46888899999999999999875 799999999975432 2344688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 454 (621)
|++|+|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 153 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999999763 289999999999999999999999 99999999999999999999999999998765432
Q ss_pred CeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCcc
Q 007020 455 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPD 534 (621)
Q Consensus 455 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 534 (621)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||.... ..+.+..+... ..+.
T Consensus 225 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~------~~~~ 289 (346)
T 4fih_A 225 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRDN------LPPR 289 (346)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHS------SCCC
T ss_pred -CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcC------CCCC
Confidence 23455679999999999999999999999999999999999999995221 11112221111 1111
Q ss_pred ccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 535 LQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 535 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+. .....+..+.+++..||+.||++|||++|+++
T Consensus 290 ~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 290 LK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CS--CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CC--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 11223467889999999999999999999865
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.1e-53 Score=437.69 Aligned_cols=269 Identities=26% Similarity=0.390 Sum_probs=220.0
Q ss_pred cCHHHHHHHhcCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccC-Cceeee
Q 007020 286 FSLRELQVATDSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVH-RNLLRL 358 (621)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l 358 (621)
+..++|++..++|++.+.||+|+||+||+|.+. .++.||||+++..........|.+|++++.++.| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 456788899999999999999999999999853 2468999999877666667789999999999965 899999
Q ss_pred eeeeecC-CceEEEEeccCCCchhhhhccCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 007020 359 RGFCMTP-TERLLVYPYMANGSVASCLRERPP------------SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRD 425 (621)
Q Consensus 359 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 425 (621)
+|+|.++ +..++|||||++|+|.++|+.... ....+++..+..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9998765 568999999999999999976422 123489999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCccc
Q 007020 426 VKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDL 503 (621)
Q Consensus 426 lk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~ 503 (621)
|||+|||+++++.+||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999987654433 33445679999999999999999999999999999999998 9999963
Q ss_pred ccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 504 ARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. ....+ ...+.... .+.. +..++.++.+++..||+.||++|||++||+++|+.
T Consensus 291 ~~----~~~~~----~~~i~~g~-----~~~~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 291 VK----IDEEF----CRRLKEGT-----RMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp CC----CSHHH----HHHHHHTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC----HHHHH----HHHHHcCC-----CCCC----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 21 11111 12221111 1111 12234678999999999999999999999999876
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.5e-52 Score=422.52 Aligned_cols=250 Identities=22% Similarity=0.245 Sum_probs=202.9
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
+.|...++||+|+||+||+|++. +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45777889999999999999965 699999999975432 24799999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC-cEEEcccccceecccC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKLMDYK 453 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 453 (621)
|+||+|.++++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999998653 389999999999999999999999 999999999999999987 6999999999976543
Q ss_pred CCe----eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 454 DTH----VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 454 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... .....+||+.|||||++.+..++.++|||||||++|||+||+.||.... ........ .......
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~----~~~~~~~i----~~~~~~~- 275 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF----RGPLCLKI----ASEPPPI- 275 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC----CSCCHHHH----HHSCCGG-
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC----HHHHHHHH----HcCCCCc-
Confidence 221 2234579999999999999999999999999999999999999996322 11112111 1111000
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
. ..+...+..+.+++..||+.||++|||+.|+++.|..
T Consensus 276 ---~----~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 276 ---R----EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp ---G----GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---h----hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 0 1122234678899999999999999999999998754
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.2e-52 Score=420.86 Aligned_cols=267 Identities=22% Similarity=0.327 Sum_probs=202.7
Q ss_pred cCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC----ceEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT----ERLLV 371 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 371 (621)
++|.+.+.||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++|++.+++ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 4577788999999999999998 58999999986432 12223445666667889999999999998654 57999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH-----CDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
||||++|+|.++++... ++|..+.+++.|+++||+|||++ ..++||||||||+|||++.++++||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~~~-----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 99999999999998643 89999999999999999999986 255899999999999999999999999999
Q ss_pred ceecccCCCee---eecccccccccchhhhccC------CCCCcccchhHHHHHHHHHhCCCCcccccccCC-------C
Q 007020 447 AKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGIMLLELITGQRAFDLARLAND-------D 510 (621)
Q Consensus 447 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~-------~ 510 (621)
|+......... .....||+.|||||++.+. .++.++|||||||++|||+||..||........ .
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 98876543322 2345799999999999765 357799999999999999999988753221110 1
Q ss_pred cchHHHHHHHHhhhcccccccCccccCcc-cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 511 DVMLLDWVKGLLKEKKLEMLVDPDLQNNY-VEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
...... +..... ....+|.+.... ..+....+.+++.+||+.||++||||.||++.|++.
T Consensus 235 ~~~~~~-~~~~~~----~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 235 DPSVEE-MRKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp SCCHHH-HHHHHT----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchHHH-HHHHHh----cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 111112 222111 112233332221 234567899999999999999999999999999763
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-51 Score=412.70 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=196.3
Q ss_pred CcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeec----CCceEEEE
Q 007020 299 SNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTERLLVY 372 (621)
Q Consensus 299 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 372 (621)
...+.||+|+||+||+|.+. +++.||+|.+.... .......|.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999865 68999999997544 33445679999999999999999999999865 34579999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeeCC-CCcEEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK--IIHRDVKAANILLDE-EFEAVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~-~~~~kl~DfGla~~ 449 (621)
|||++|+|.+++.... .+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999998643 389999999999999999999998 6 999999999999984 78999999999985
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... ......+||+.|||||++.+ .++.++|||||||++|||+||+.||.... ..............
T Consensus 182 ~~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-------~~~~~~~~i~~~~~--- 247 (290)
T 3fpq_A 182 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRVTSGVK--- 247 (290)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHHTTTCC---
T ss_pred CCC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------cHHHHHHHHHcCCC---
Confidence 432 23445679999999999865 69999999999999999999999995211 11122222111110
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+.. ....+.++.+++..||+.||++|||++|+++
T Consensus 248 --~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 --PASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --CGGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCCC----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111 1112256889999999999999999999976
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-52 Score=420.42 Aligned_cols=248 Identities=22% Similarity=0.296 Sum_probs=207.6
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. .......+.+|+++++.++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46889999999999999999864 79999999997542 1233457899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998653 389999999999999999999999 999999999999999999999999999998754
Q ss_pred CC-CeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. .......+||+.|||||++.+..++.++||||+||++|||++|+.||.... ..+....+....
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~------ 250 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAKIIKLE------ 250 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC------
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC------
Confidence 33 334556789999999999999999999999999999999999999996321 112222222211
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 569 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl 569 (621)
..+.. ..+.++.+++..|++.||++|||++|++
T Consensus 251 -~~~p~----~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 -YDFPE----KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -CCCCT----TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -CCCCc----ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11111 1235688999999999999999999874
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.7e-51 Score=428.22 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=206.8
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
+.|+..+.||+|+||+||+|++. +|+.||||++..... .....+.+|+.+++.++|||||++++++.+++..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56899999999999999999975 699999999975442 3345688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 454 (621)
|+||+|.+++.... +++..+..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~~-----l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 230 LEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CTTEEHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCcHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 99999999997642 89999999999999999999999 99999999999999999999999999998765432
Q ss_pred CeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCcc
Q 007020 455 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPD 534 (621)
Q Consensus 455 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 534 (621)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||.... ..+.+..+... ..+.
T Consensus 302 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~------~~~~ 366 (423)
T 4fie_A 302 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRDN------LPPR 366 (423)
T ss_dssp -CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHS------CCCC
T ss_pred -ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcC------CCCC
Confidence 23455679999999999999999999999999999999999999995221 11212222111 1111
Q ss_pred ccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 535 LQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 535 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+. ........+.+++..||+.||++|||++|+++
T Consensus 367 ~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 367 LK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred Cc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 01122367889999999999999999999865
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-51 Score=405.58 Aligned_cols=246 Identities=22% Similarity=0.355 Sum_probs=191.2
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|++.+.||+|+||+||+|... +|+.||||++++... ......+.+|+.+++.++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999865 799999999975532 233457899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+ +|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999998754 389999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
. .......||+.|||||++.+..+ +.++||||+||++|||+||+.||.... .....+...... .
T Consensus 165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--------~~~~~~~i~~~~-~---- 229 (275)
T 3hyh_A 165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGV-Y---- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-C----
Confidence 2 23345679999999999998876 579999999999999999999996321 122222222211 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+. ...+.++.+++..|++.||++|||++|+++
T Consensus 230 --~~p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 --TLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --CCC----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 112357889999999999999999999976
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.1e-51 Score=412.75 Aligned_cols=243 Identities=24% Similarity=0.327 Sum_probs=194.0
Q ss_pred cCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
++|++.+.||+|+||+||+|+.. +++.||||+++.... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999752 478999999975432 2233468899999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
|||||+||+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998653 389999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
.... ......+||+.|||||++.+..++.++||||+||++|||+||+.||.... ..+.+..+.+.. .
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~-~--- 243 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILKAK-L--- 243 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C---
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHcCC-C---
Confidence 4322 23345679999999999999999999999999999999999999996321 112222222211 0
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKM 565 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 565 (621)
.. +...+.++.+++..||+.||++|||+
T Consensus 244 ---~~----p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 ---GM----PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ---CC----CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ---CC----CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 11 11223678899999999999999985
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.6e-50 Score=407.95 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=191.1
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC--------
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-------- 366 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 366 (621)
++|+..+.||+|+||+||+|++. +|+.||||+++..........+.+|+++++.++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35888999999999999999865 789999999986665556678999999999999999999999987544
Q ss_pred ----ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEc
Q 007020 367 ----ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442 (621)
Q Consensus 367 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 442 (621)
..|+|||||++|+|.+++...... ...++..++.++.||++||+|||++ +||||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI-EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC-ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 368999999999999999865421 1255667889999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCe-----------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCc
Q 007020 443 DFGLAKLMDYKDTH-----------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDD 511 (621)
Q Consensus 443 DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~ 511 (621)
|||+|+.+...... .....+||+.|||||++.+..++.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 99999876543221 1234569999999999999999999999999999999996 774211
Q ss_pred chHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 512 VMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.....+... . .... ..........+.+++..||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~-~--------~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -ERVRTLTDV-R--------NLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHHH-H--------TTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHH-h--------cCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 011111111 0 1011 1112333456678999999999999999999976
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-47 Score=396.73 Aligned_cols=263 Identities=20% Similarity=0.297 Sum_probs=200.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeec------CC
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMT------PT 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 366 (621)
.++|++.+.||+|+||+||+|.+. +|+.||||+++.... ......+.+|+++++.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999864 799999999976543 3345578899999999999999999998754 36
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..|+|||||+ |+|.+++.... ++++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999997643 399999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCC---CeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007020 447 AKLMDYKD---THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 522 (621)
Q Consensus 447 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 522 (621)
|+.+.... .......+||+.|||||++.+. .++.++||||+|||+|||++|++||.... .......+....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-----~~~~l~~I~~~~ 279 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-----YVHQLQLIMMVL 279 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-----HHHHHHHHHHHH
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHhc
Confidence 98764321 2234456799999999998875 46999999999999999999999996321 111111111111
Q ss_pred hhccccc--------------ccCccccC---cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 523 KEKKLEM--------------LVDPDLQN---NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 523 ~~~~~~~--------------~~d~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
....... ...+.... ........++.+++..||..||++|||++|+++
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000000 00000000 000112356889999999999999999999865
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-46 Score=389.37 Aligned_cols=196 Identities=23% Similarity=0.412 Sum_probs=169.3
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCce
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 368 (621)
..+.|++.+.||+|+||+||+|+.+ +++.||+|.+.... ...++.+|+++++.+ +|||||++++++.+.++.
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999742 47889999986543 244678999999988 699999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC-CcEEEcccccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLA 447 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla 447 (621)
++||||+++|+|.+++.. +++.+++.++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 999999999999999852 88999999999999999999999 99999999999999876 79999999999
Q ss_pred eecccCCC---------------------------eeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCC
Q 007020 448 KLMDYKDT---------------------------HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQR 499 (621)
Q Consensus 448 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~ 499 (621)
+....... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86542211 112345699999999999876 48999999999999999999999
Q ss_pred Ccc
Q 007020 500 AFD 502 (621)
Q Consensus 500 pf~ 502 (621)
||.
T Consensus 246 Pf~ 248 (361)
T 4f9c_A 246 PFY 248 (361)
T ss_dssp SSS
T ss_pred CCC
Confidence 995
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.7e-46 Score=381.46 Aligned_cols=279 Identities=40% Similarity=0.680 Sum_probs=238.9
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
++....++|...+.||+|+||+||+|.+.+|+.||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 3444678999999999999999999998889999999986543 344567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 99999999999999987654455689999999999999999999999 999999999999999999999999999986
Q ss_pred cccCC-CeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 450 MDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 450 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
..... ........||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......|.........+.
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS--SCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH--HHHHHHHHhhhccccccHH
Confidence 54322 22233445899999999999999999999999999999999999999743322 2234556666656666677
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
...++........+....+.+++..||+.||++|||+.+|++.|+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 7777777777778888999999999999999999999999999986
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.1e-45 Score=403.40 Aligned_cols=251 Identities=19% Similarity=0.274 Sum_probs=206.8
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
++|++.+.||+|+||+||+|... +|+.||+|+++... ......+.+|+.+|+.++|||||++++++.+++..++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 67999999999999999999865 79999999997543 34456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC--CcEEEcccccceeccc
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE--FEAVVGDFGLAKLMDY 452 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~--~~~kl~DfGla~~~~~ 452 (621)
|+||+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 236 ~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99999999997542 2389999999999999999999999 99999999999999854 8999999999998754
Q ss_pred CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
. ......+||+.|||||++.+..++.++||||+||++|||++|+.||.... ..+....+....
T Consensus 310 ~--~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--------~~~~~~~i~~~~------- 372 (573)
T 3uto_A 310 K--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNVKSCD------- 372 (573)
T ss_dssp T--SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTC-------
T ss_pred C--CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHhCC-------
Confidence 3 23345679999999999999999999999999999999999999996221 112222221111
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+...........+.+++..||+.||++|||+.|+++
T Consensus 373 ~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 373 WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111111223367889999999999999999999976
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.4e-45 Score=399.98 Aligned_cols=249 Identities=27% Similarity=0.333 Sum_probs=198.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHH---HHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQT---EVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
-++|++.++||+|+||+||+|+.. +|+.||||++++... ......+.. ++.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999865 699999999965321 111222333 45666778899999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
|+||||++||+|.++|.... .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999998653 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
.+... .....+||+.|||||++.+ ..|+.++||||+||++|||++|++||....... .....+..... .
T Consensus 341 ~~~~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~~-~- 410 (689)
T 3v5w_A 341 DFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTM-A- 410 (689)
T ss_dssp ECSSC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHHC-C-
T ss_pred ecCCC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcCC-C-
Confidence 76533 2345679999999999974 579999999999999999999999996332111 11111111111 1
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPK-----MSEVV 569 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-----~~~vl 569 (621)
... +...+.++.+++..|++.||.+|++ ++||+
T Consensus 411 -----~~~----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 411 -----VEL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp -----CCC----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred -----CCC----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 111 1122367889999999999999998 56664
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=366.74 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=198.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
..++|++.+.||+|+||+||+|.+ .+|+.||||++...........+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357889999999999999999986 4799999999976654444557899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999997643 289999999999999999999999 999999999999999999999999999986554
Q ss_pred CCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
..........||+.|+|||++.+..+ +.++||||+||++|+|++|..||+... ..+......... .
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~---- 227 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKKIMRGK-Y---- 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-C----
Confidence 43334455679999999999988775 899999999999999999999996321 112222222211 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
... ......+.+++..||+.||++|||++|+++
T Consensus 228 --~~p----~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 228 --DVP----KWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp --CCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCC----CCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 011 112356788999999999999999999986
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.8e-43 Score=354.40 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=206.1
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|+..+.||+|+||+||+|.. .+++.||||.+..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46899999999999999999985 4789999999875443 234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 98 YLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CCTTCBHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCCHHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 999999999998642 88999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCc
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDP 533 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 533 (621)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ............ .....
T Consensus 170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~~~~~~-~~~~~- 238 (297)
T 3fxz_A 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRALYLIATNGT-PELQN- 238 (297)
T ss_dssp TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHHCS-CCCSC-
T ss_pred cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC-CCCCC-
Confidence 32 23445699999999999999999999999999999999999999953211 111111111111 01111
Q ss_pred cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 534 DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 534 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.......+.+++..||+.||++|||++|+++
T Consensus 239 ------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 ------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1223367889999999999999999999976
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.9e-44 Score=372.92 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=211.4
Q ss_pred HhcCCCcCceeeeccCceEEEEEc--------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeec
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL--------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 364 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 364 (621)
..++|.+.+.||+|+||+||+|.+ .++..||||+++..........+.+|+.+++.+ +||||+++++++.+
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 357888999999999999999974 245679999998765555566799999999999 89999999999999
Q ss_pred CCceEEEEeccCCCchhhhhccCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCee
Q 007020 365 PTERLLVYPYMANGSVASCLRERPPS------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANIL 432 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 432 (621)
.+..++||||+++|+|.+++...... ...+++..+..++.||+.||+|||++ +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 99999999999999999999875421 22478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCC
Q 007020 433 LDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDD 510 (621)
Q Consensus 433 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~ 510 (621)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~----- 310 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----- 310 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----
Confidence 999999999999999876543221 2233457889999999999999999999999999999999 999996321
Q ss_pred cchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 511 DVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.......+ .... .+. .+......+.+++..||+.||++||++.|+++.|+.
T Consensus 311 ~~~~~~~~---~~~~------~~~----~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 311 VEELFKLL---KEGH------RMD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp GGGHHHHH---HTTC------CCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHH---hcCC------CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111111 1111 011 112234678999999999999999999999999986
No 25
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.7e-42 Score=353.11 Aligned_cols=283 Identities=37% Similarity=0.612 Sum_probs=228.6
Q ss_pred cccccCHHHHHHHhcCCCcC------ceeeeccCceEEEEEcCCCcEEEEEEecccC---CchhHHHHHHHHHHHHhccC
Q 007020 282 QLKRFSLRELQVATDSFSNK------NILGRGGFGKVYKGRLADGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVH 352 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h 352 (621)
....++..++..+++.|... +.||+|+||+||+|.. +++.||||.+.... .......+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 35678899999999998877 8999999999999998 58899999986543 23345678999999999999
Q ss_pred CceeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCee
Q 007020 353 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANIL 432 (621)
Q Consensus 353 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 432 (621)
|||+++++++.+.+..++||||+++|+|.+++..... ..++++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999875332 23489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCc
Q 007020 433 LDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDD 511 (621)
Q Consensus 433 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~ 511 (621)
++.++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|+|++|..||......
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---- 240 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP---- 240 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS----
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch----
Confidence 99999999999999987654322 22334569999999998865 5789999999999999999999999743322
Q ss_pred chHHHHHHHHhhh-cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 512 VMLLDWVKGLLKE-KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 512 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.....+....... ..+...+++.+ ..........+.+++..||+.+|.+|||+++|++.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1222333322221 12233334333 233556778899999999999999999999999999874
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.8e-44 Score=366.61 Aligned_cols=264 Identities=28% Similarity=0.424 Sum_probs=203.6
Q ss_pred HHHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCC
Q 007020 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 366 (621)
Q Consensus 288 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 366 (621)
..++++..++|++.+.||+|+||+||+|+. +|+.||||++..... ......+.+|++++++++||||+++++++.+..
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 334455677899999999999999999987 588999999876543 333457899999999999999999999999999
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeeCCCCcEEEccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDF 444 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Df 444 (621)
..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999986432 12378899999999999999999999 8 999999999999999999999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
|+++..... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.... ..+........
T Consensus 184 g~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~--------~~~~~~~~~~~ 254 (309)
T 3p86_A 184 GLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN--------PAQVVAAVGFK 254 (309)
T ss_dssp C------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC--------HHHHHHHHHHS
T ss_pred CCCcccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhc
Confidence 999864432 122334569999999999999999999999999999999999999996321 11111111110
Q ss_pred cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 525 KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 525 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. .... .......+.+++..||+.||++|||++++++.|+.
T Consensus 255 ~~-----~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~ 295 (309)
T 3p86_A 255 CK-----RLEI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295 (309)
T ss_dssp CC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC-----CCCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00 0111 11223678899999999999999999999999976
No 27
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7e-43 Score=356.63 Aligned_cols=257 Identities=26% Similarity=0.400 Sum_probs=208.8
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|...+.||+|+||+||+|.+. +++.||+|.+... .......+.+|+++++.++||||+++++++.+++..++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 467888899999999999999875 6899999988543 34556679999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999987432 389999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCee-------------eecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCC-cchHHHHHH
Q 007020 454 DTHV-------------TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDD-DVMLLDWVK 519 (621)
Q Consensus 454 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~ 519 (621)
.... .....||+.|+|||++.+..++.++||||||+++|||++|..||......... ......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 2211 11456999999999999999999999999999999999999998633221111 111111111
Q ss_pred HHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 520 GLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 520 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
. .. ....+..+.+++..||+.||++|||++++++.|+..
T Consensus 242 ~-------------~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 242 R-------------YC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp H-------------TC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred c-------------cC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 00 111225688999999999999999999999999874
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.1e-44 Score=365.54 Aligned_cols=257 Identities=27% Similarity=0.418 Sum_probs=208.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
.++|.+.+.||+|+||+||+|.+. .+..||||+++..........+.+|+.+++.++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467888899999999999999874 3456999999876666667789999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999975432 389999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCe--eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 451 DYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 451 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||.... ..+...........
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--------~~~~~~~~~~~~~~ 273 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--------NRDVISSVEEGYRL 273 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--------HHHHHHHHHTTCCC
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHcCCCC
Confidence 543222 2223346778999999999999999999999999999999 999995221 11222222111110
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.........+.+++..||+.||++|||+.+|++.|+..
T Consensus 274 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 274 ----------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11122346789999999999999999999999999873
No 29
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.5e-43 Score=367.40 Aligned_cols=272 Identities=23% Similarity=0.321 Sum_probs=209.8
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc--hhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP--GGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 369 (621)
..++|++.+.||+|+||+||+|+.. +++.||+|++++.... .....+..|..++..+ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3467889999999999999999865 6889999999765322 2233578899998876 8999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 130 lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999999998643 389999999999999999999999 999999999999999999999999999985
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..............+++.........
T Consensus 203 ~~~-~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-- 279 (396)
T 4dc2_A 203 GLR-PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 279 (396)
T ss_dssp CCC-TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--
T ss_pred ccc-CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--
Confidence 322 22234556799999999999999999999999999999999999999964322211111111222222211111
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHH---HHHHHHhcCCCcc-chhh
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMS---EVVRMLEGDGLAE-RWDE 583 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~---~vl~~L~~~~~~~-~~~~ 583 (621)
.+ +......+.+++..||+.||++||++. .+.+.++...+.. .|+.
T Consensus 280 ----~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~ 329 (396)
T 4dc2_A 280 ----RI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329 (396)
T ss_dssp ----CC----CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHH
T ss_pred ----CC----CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHH
Confidence 11 112236788999999999999999962 4455556665553 4443
No 30
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.2e-44 Score=372.75 Aligned_cols=270 Identities=27% Similarity=0.404 Sum_probs=217.3
Q ss_pred ccCHHHHHHHhcCCCcCceeeeccCceEEEEEc------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceee
Q 007020 285 RFSLRELQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLR 357 (621)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 357 (621)
.+....+++..++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345677888899999999999999999999972 356899999998766556667899999999999 7999999
Q ss_pred eeeeeecCCc-eEEEEeccCCCchhhhhccCCCC----------------------------------------------
Q 007020 358 LRGFCMTPTE-RLLVYPYMANGSVASCLRERPPS---------------------------------------------- 390 (621)
Q Consensus 358 l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------- 390 (621)
+++++.+.+. .++||||+++|+|.+++......
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999887654 89999999999999999875421
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCC
Q 007020 391 ----------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454 (621)
Q Consensus 391 ----------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 454 (621)
...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 11288899999999999999999999 99999999999999999999999999998654332
Q ss_pred C-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 455 T-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 455 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
. .......||..|+|||++.+..++.++||||||+++|||++ |..||..... .... ..........
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~----~~~~~~~~~~---- 315 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEF----CRRLKEGTRM---- 315 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHH----HHHHHHTCCC----
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----hHHH----HHHHHcCCCC----
Confidence 2 23344568999999999999999999999999999999998 9999963221 1111 1111111110
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. .......+.+++..||+.||++|||+.+|+++|+.
T Consensus 316 -~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 316 -RA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp -CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CC----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11 11123578899999999999999999999999986
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.4e-43 Score=370.82 Aligned_cols=258 Identities=29% Similarity=0.430 Sum_probs=200.1
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
..++|.+.+.||+|+||+||+|++. ++..||||.++..........+.+|+.+++.++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3468899999999999999999864 577899999987655566678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.++++... ..+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999998643 2489999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCee--eecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 450 MDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 450 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--------~~~~~~~i~~~~~ 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--------NQDVIKAVDEGYR 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--------HHHHHHHHHTTEE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCC
Confidence 65432221 122235778999999999999999999999999999998 999995221 1122222111111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.......+..+.+++..||+.||++||++.+|++.|+..
T Consensus 269 ----------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 269 ----------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp ----------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 001112346789999999999999999999999999874
No 32
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-44 Score=377.68 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=210.4
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
+.+..++|.+.+.||+|+||+||+|.+. +++.||||.++..........+.+|+.+++.++||||+++++++...+..+
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3445678889999999999999999976 789999999986654455567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 189 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp EEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 9999999999999997642 2388999999999999999999999 999999999999999999999999999986
Q ss_pred cccCCCeee-ecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 450 MDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 450 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
......... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.... .....+++ .....
T Consensus 263 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~~~~~~~~---~~~~~- 333 (377)
T 3cbl_A 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-----NQQTREFV---EKGGR- 333 (377)
T ss_dssp CTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----HHHHHHHH---HTTCC-
T ss_pred cCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH---HcCCC-
Confidence 432211111 11235778999999999899999999999999999998 999995321 11111111 11110
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. .+..++..+.+++..||+.||++|||+++|++.|++
T Consensus 334 --~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 371 (377)
T 3cbl_A 334 --LP-------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371 (377)
T ss_dssp --CC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CC-------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 01 111233678899999999999999999999999976
No 33
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.3e-43 Score=351.12 Aligned_cols=257 Identities=26% Similarity=0.411 Sum_probs=212.7
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
..++|+..+.||+|+||+||+|.+.++..||+|+++.... ...++.+|++++..++||||+++++++.+....++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 4578889999999999999999998888999999975432 34568999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999997642 2388999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
.........+|..|+|||.+.+..++.++||||||+++|+|++ |+.||+... ............ ....
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~---~~~~ 226 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT--------NSEVVLKVSQGH---RLYR 226 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHHTTC---CCCC
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC--------hHHHHHHHHcCC---CCCC
Confidence 4444444557788999999999889999999999999999999 999996322 111111111111 1111
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
+.. ....+.+++..||+.+|++|||+.++++.|+...
T Consensus 227 ~~~-------~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 227 PHL-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp CTT-------SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred CCc-------ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 111 1257889999999999999999999999998853
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1e-42 Score=357.61 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=205.4
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788999999999999999987 579999999997654 3344557889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999997643 288999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccchhhhccCCCC-CcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSS-EKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. ......||+.|+|||++.+..+. .++||||+||++|+|++|+.||+... ..+......... .
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~-~---- 231 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVLRGK-Y---- 231 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C----
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-C----
Confidence 22 23455699999999999888765 79999999999999999999996321 122222222211 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. +......+.+++..|++.||.+|||++|+++
T Consensus 232 --~~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 --RI----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp --CC----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred --CC----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 1112357889999999999999999999965
No 35
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.5e-43 Score=350.47 Aligned_cols=255 Identities=25% Similarity=0.433 Sum_probs=210.0
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
..++|+..+.||+|+||+||+|.+.+++.||+|+++.... ...++.+|++++++++||||+++++++.+....++|||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 3467888999999999999999988889999999975432 34578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999976432 489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
.........++..|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ..+......... ....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--------~~~~~~~~~~~~---~~~~ 228 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDISTGF---RLYK 228 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTC---CCCC
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHhcCc---cCCC
Confidence 2222333457788999999999999999999999999999999 999996321 112222221110 1111
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+. .....+.+++..||+.||++||+++++++.|++
T Consensus 229 ~~-------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 229 PR-------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp CT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC-------cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 11 123678899999999999999999999999976
No 36
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.5e-43 Score=354.58 Aligned_cols=263 Identities=23% Similarity=0.320 Sum_probs=206.8
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|++.+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 567899999999999999999864 689999999865432 33345789999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999998653 389999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ............
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~~----- 229 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--------VSIAIKHIQDSV----- 229 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--------HHHHHHHHSSCC-----
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhhccC-----
Confidence 4433344456699999999999999999999999999999999999999963211 111111111100
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCCCc
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-KMSEVVRMLEGDGLA 578 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-t~~~vl~~L~~~~~~ 578 (621)
+..........+..+.+++..|++.||++|| +++++.+.|+.....
T Consensus 230 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 230 -PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp -CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred -CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0000011122346788999999999999999 999999999875433
No 37
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=354.43 Aligned_cols=275 Identities=18% Similarity=0.214 Sum_probs=216.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC--ceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 371 (621)
.++|.+.+.||+|+||+||+|... +++.||||+++..........+.+|+++++.++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467889999999999999999875 589999999976554445667889999999999999999999987665 77999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee----CCCCcEEEcccccc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLA 447 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfGla 447 (621)
|||+++|+|.+++..... ...+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999986432 22389999999999999999999999 99999999999999 78888999999999
Q ss_pred eecccCCCeeeecccccccccchhhhc--------cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLS--------TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
+...... ......||..|+|||++. +..++.++|||||||++|||++|+.||......... .+.+.
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~~~~ 237 (319)
T 4euu_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN----KEVMY 237 (319)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC----HHHHH
T ss_pred eecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh----HHHHH
Confidence 8765432 223456999999999986 467899999999999999999999999643222222 22222
Q ss_pred HHhhhcccc---cc---c--------CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCCcc
Q 007020 520 GLLKEKKLE---ML---V--------DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAE 579 (621)
Q Consensus 520 ~~~~~~~~~---~~---~--------d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 579 (621)
......... .+ . +..............+.+++..|++.||++|||++|+++...+.....
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp HHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred HHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 222221110 00 0 001112334667788999999999999999999999999988765543
No 38
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=368.09 Aligned_cols=262 Identities=28% Similarity=0.420 Sum_probs=213.9
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC--------CCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeee
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA--------DGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCM 363 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 363 (621)
+..++|.+.+.||+|+||+||+|.+. .+..||||+++.........++.+|+++++.+ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 34578889999999999999999842 34679999998776666667899999999999 8999999999999
Q ss_pred cCCceEEEEeccCCCchhhhhccCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 007020 364 TPTERLLVYPYMANGSVASCLRERPPS------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 431 (621)
Q Consensus 364 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 431 (621)
.++..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 999999999999999999999875421 23489999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCC
Q 007020 432 LLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLAND 509 (621)
Q Consensus 432 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~ 509 (621)
|++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~---- 298 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---- 298 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----
Confidence 999999999999999986643322 22333457889999999999999999999999999999999 999995221
Q ss_pred CcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 510 DDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
..+........... .. .......+.+++..||+.||++|||+++|++.|+..
T Consensus 299 ----~~~~~~~~~~~~~~------~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 299 ----VEELFKLLKEGHRM------DK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp ----HHHHHHHHHTTCCC------CC----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHHHHHcCCCC------CC----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11222222111111 11 112236789999999999999999999999999874
No 39
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-42 Score=356.83 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=202.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|++.+.||+|+||+||+|... +++.||||++...........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367889999999999999999865 7899999999765544445678999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999997643 389999999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-eeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 454 DT-HVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 454 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... .......|... . ...
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~~~~~~----~---~~~ 228 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQEYSDWKEK----K---TYL 228 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT---TSHHHHHHHTT----C---TTS
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHHhcc----c---ccC
Confidence 22 22334569999999999987775 7789999999999999999999963221 11112222111 0 000
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+ .......+.+++..|++.||++|||++|+++
T Consensus 229 ~~------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 NP------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred Cc------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 1122357789999999999999999999965
No 40
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-43 Score=365.47 Aligned_cols=268 Identities=24% Similarity=0.365 Sum_probs=212.5
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEc------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeee
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFC 362 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 362 (621)
++++..++|...+.||+|+||+||+|.+ .++..||||+++..........+.+|+.++..+ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 4566778999999999999999999985 246689999997655455566799999999999 899999999999
Q ss_pred ecCCceEEEEeccCCCchhhhhccCCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 007020 363 MTPTERLLVYPYMANGSVASCLRERPPS-------------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423 (621)
Q Consensus 363 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 423 (621)
...+..++||||+++|+|.+++...... ...+++..+..++.||+.||+|||++ +|+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9999999999999999999999865321 12378999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCc
Q 007020 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501 (621)
Q Consensus 424 ~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf 501 (621)
|||||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |..||
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999876543332 3334557889999999999999999999999999999998 99999
Q ss_pred ccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 502 DLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
.... ........+. ... .... .......+.+++..||+.||.+|||+.+|++.|+....
T Consensus 276 ~~~~----~~~~~~~~~~----~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 276 PGIP----VDANFYKLIQ----NGF-----KMDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp TTCC----CSHHHHHHHH----TTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ccCC----cHHHHHHHHh----cCC-----CCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 6322 1111111111 110 0111 11223678999999999999999999999999987533
No 41
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6e-43 Score=362.28 Aligned_cols=266 Identities=26% Similarity=0.431 Sum_probs=215.3
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeee
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 363 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 363 (621)
.+....++|.+.+.||+|+||.||+|.+. +++.||||+++..........+.+|+.+++.++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34456788999999999999999999864 348899999987665556678999999999999999999999999
Q ss_pred cCCceEEEEeccCCCchhhhhccCCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 007020 364 TPTERLLVYPYMANGSVASCLRERPPS--------------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIH 423 (621)
Q Consensus 364 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 423 (621)
+.+..++||||+++|+|.+++...... ...+++..++.++.||++||+|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999999999999999999874321 14589999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCc
Q 007020 424 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAF 501 (621)
Q Consensus 424 ~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf 501 (621)
|||||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999986543221 22334458899999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 502 DLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
.... ..+........ ... .. .......+.+++..||+.||++||++.++++.|++..
T Consensus 278 ~~~~--------~~~~~~~~~~~-~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 278 YGMA--------HEEVIYYVRDG-NIL-----AC----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTSC--------HHHHHHHHHTT-CCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCC--------hHHHHHHHhCC-CcC-----CC----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 5221 11222222111 111 11 1122367899999999999999999999999998853
No 42
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8e-42 Score=350.41 Aligned_cols=260 Identities=21% Similarity=0.305 Sum_probs=209.7
Q ss_pred ccCHHHHHHHhcC----------CCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCC
Q 007020 285 RFSLRELQVATDS----------FSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR 353 (621)
Q Consensus 285 ~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ 353 (621)
.++.+++..+.+. |...+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCC
Confidence 4566666665543 566678999999999999876 79999999987544 33455788999999999999
Q ss_pred ceeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee
Q 007020 354 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL 433 (621)
Q Consensus 354 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 433 (621)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998753 389999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcch
Q 007020 434 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513 (621)
Q Consensus 434 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~ 513 (621)
+.++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-------- 245 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-------- 245 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------
T ss_pred CCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 9999999999999987653322 2344569999999999999999999999999999999999999996321
Q ss_pred HHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 514 LLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+.+...... ..+.... .......+.+++..||+.||++|||++++++
T Consensus 246 ~~~~~~~~~~~------~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 246 PVQAMKRLRDS------PPPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHHHHHHS------SCCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHhcC------CCCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111211111 1111111 1122357889999999999999999999986
No 43
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.3e-43 Score=382.89 Aligned_cols=265 Identities=26% Similarity=0.384 Sum_probs=215.7
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
++..++|.+.+.||+|+||.||+|.+. ++..||||.++.... ....|.+|+.++++++||||+++++++......++
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 344567888899999999999999976 488999999976432 35679999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 294 v~E~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEECCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceec
Confidence 9999999999999986432 2388999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
............++..|+|||++.+..++.++|||||||++|||++ |..||.... .....+.+.. ..
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~---~~---- 436 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK---DY---- 436 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHT---TC----
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHc---CC----
Confidence 5433223333446789999999999999999999999999999999 999996322 1111121111 10
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCCccch
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERW 581 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~~~ 581 (621)
....+..++..+.+++..||+.||++|||+.+|++.|+........
T Consensus 437 ------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 482 (495)
T 1opk_A 437 ------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 482 (495)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSCH
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcccc
Confidence 0011122346789999999999999999999999999987655443
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.1e-42 Score=358.36 Aligned_cols=252 Identities=21% Similarity=0.288 Sum_probs=205.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCch-----hHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPG-----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
.+.|.+.+.||+|+||+||+|... +|+.||+|+++...... ....+.+|+.+++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467889999999999999999875 68999999997654321 246789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC----cEEEccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 444 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Df 444 (621)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997643 389999999999999999999999 999999999999998877 7999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
|++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+....+...
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~~~~~i~~~ 233 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITAV 233 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTT
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhc
Confidence 9998765322 2344569999999999999899999999999999999999999995321 11222222111
Q ss_pred cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 525 KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 525 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. .-.++. ........+.+++..|+..||++|||+.|+++
T Consensus 234 ~---~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 S---YDFDEE----FFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp C---CCCCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred C---CCCCch----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 001111 11122367889999999999999999999865
No 45
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.8e-42 Score=351.79 Aligned_cols=261 Identities=25% Similarity=0.383 Sum_probs=202.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHh--ccCCceeeeeeeeec----CCc
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM--AVHRNLLRLRGFCMT----PTE 367 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~ 367 (621)
..++|++.+.||+|+||+||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++.. ...
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 357899999999999999999998 6899999998643 34456667777665 789999999998654 345
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeeeCCCCcE
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--------DHCDPKIIHRDVKAANILLDEEFEA 439 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~ 439 (621)
.++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eEEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 79999999999999999643 3899999999999999999999 77 99999999999999999999
Q ss_pred EEcccccceecccCCCee---eecccccccccchhhhccC------CCCCcccchhHHHHHHHHHhC----------CCC
Q 007020 440 VVGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGIMLLELITG----------QRA 500 (621)
Q Consensus 440 kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~p 500 (621)
||+|||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 999999998765443332 2234699999999999876 345789999999999999999 777
Q ss_pred cccccccCCCcchHHHHHHHHhhhcccccccCcccc-CcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 501 FDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQ-NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 501 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
|........ .... +........ ..+... ..........+.+++..||+.||++|||+.+|++.|+++
T Consensus 233 f~~~~~~~~---~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPNDP---SFED-MRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSSC---CHHH-HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCCc---chhh-hhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 753222111 1111 111111111 111111 112335668899999999999999999999999999863
No 46
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.1e-43 Score=359.74 Aligned_cols=264 Identities=27% Similarity=0.410 Sum_probs=214.1
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEc------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT 364 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 364 (621)
++...++|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+|+.+++.++||||+++++++.+
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 344567889999999999999999975 24588999999876655666789999999999999999999999999
Q ss_pred CCceEEEEeccCCCchhhhhccCCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEec
Q 007020 365 PTERLLVYPYMANGSVASCLRERPP--------------------SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHR 424 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 424 (621)
.+..++||||+++|+|.+++..... ....+++..+..++.||++||+|||++ +|+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 9999999999999999999987543 122478899999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEcccccceecccCCCee-eecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcc
Q 007020 425 DVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFD 502 (621)
Q Consensus 425 Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~ 502 (621)
||||+||+++.++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998765433222 223447889999999999889999999999999999999 999996
Q ss_pred cccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 503 LARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.... ......+. ... .... .......+.+++..||+.||++||++.++++.|+..
T Consensus 255 ~~~~-----~~~~~~~~----~~~-----~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 255 GIPP-----ERLFNLLK----TGH-----RMER----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp TCCG-----GGHHHHHH----TTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCH-----HHHHHHhh----cCC-----cCCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3221 11111111 111 0111 112336789999999999999999999999999763
No 47
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.2e-43 Score=358.06 Aligned_cols=269 Identities=27% Similarity=0.340 Sum_probs=207.2
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC----ce
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT----ER 368 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 368 (621)
+..++|++.+.||+|+||+||+|++. ++.||||+++... .....+..|+.+++.++||||+++++++.... ..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 34578899999999999999999985 7999999986432 33445667888899999999999999998754 36
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEecCCCCCCeeeCCCCcEEE
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH-------CDPKIIHRDVKAANILLDEEFEAVV 441 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------~~~~ivH~Dlk~~Nill~~~~~~kl 441 (621)
++||||+++|+|.+++.... +++..+..++.|+++||+|||+. ++++|+||||||+|||++.++.+||
T Consensus 98 ~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEecCCCCCHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 99999999999999997643 89999999999999999999986 2347999999999999999999999
Q ss_pred cccccceecccCCCe-eeecccccccccchhhhccC-----CCCCcccchhHHHHHHHHHhCCCCcccccccCCC-----
Q 007020 442 GDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTG-----KSSEKTDVFGYGIMLLELITGQRAFDLARLANDD----- 510 (621)
Q Consensus 442 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~----- 510 (621)
+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543322 23335699999999999863 3456889999999999999999999643221111
Q ss_pred ---cchHHHHHHHHhhhcccccccCccccCc-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 511 ---DVMLLDWVKGLLKEKKLEMLVDPDLQNN-YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 511 ---~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
......+...... .. ..+.+... ........+.+++..||+.||++|||+++|++.|+.
T Consensus 253 ~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVH-KK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HCSSCCHHHHHHHHTT-SC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhc-cc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 0111122111111 11 11111111 112345679999999999999999999999999986
No 48
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-42 Score=365.59 Aligned_cols=261 Identities=21% Similarity=0.298 Sum_probs=209.4
Q ss_pred HHHHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeec
Q 007020 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMT 364 (621)
Q Consensus 288 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 364 (621)
+.+++...++|...+.||+|+||+||+|+.. +++.||+|++++... ......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566789999999999999999999875 689999999865221 1122347899999999999999999999999
Q ss_pred CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccc
Q 007020 365 PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 444 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 444 (621)
....++||||+++|+|.+++.... +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~-----~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 999999999999999999997642 88999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCC----CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK----SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKG 520 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 520 (621)
|+++..............||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~ 284 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSK 284 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHH
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--------hhhHHHH
Confidence 999876654444445677999999999998765 7889999999999999999999996321 1122222
Q ss_pred HhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 007020 521 LLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMD--RPKMSEVVRM 571 (621)
Q Consensus 521 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~~vl~~ 571 (621)
+......... +. .......+.+++..|++.+|.+ ||+++||++.
T Consensus 285 i~~~~~~~~~--p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 285 IMNHKNSLTF--PD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHTHHHHCCC--CT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHhccccccC--CC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 2221110011 10 0012367889999999999988 9999998764
No 49
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.8e-43 Score=354.31 Aligned_cols=258 Identities=21% Similarity=0.332 Sum_probs=198.6
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcCC----CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCc
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 367 (621)
++..++|++.+.||+|+||+||+|.+.. +..||+|.++..........+.+|+.+++.++||||+++++++. ++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 3445788899999999999999998642 45799999876655556677999999999999999999999974 567
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccc
Confidence 899999999999999998643 2489999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
+..............+++.|+|||++.+..++.++||||||+++|||++ |..||..... ...... ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~~~~---i~~~~~ 235 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGR---IENGER 235 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHH---HHTTCC
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHHHHH---HHcCCC
Confidence 8765443333334457889999999999999999999999999999997 9999963221 111111 111110
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. .....+..+.+++..||+.||++|||+.++++.|+.
T Consensus 236 ------~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 273 (281)
T 1mp8_A 236 ------LP----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273 (281)
T ss_dssp ------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00 111233678899999999999999999999999987
No 50
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-43 Score=364.83 Aligned_cols=260 Identities=27% Similarity=0.404 Sum_probs=210.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCc
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 367 (621)
..++|.+.+.||+|+||+||+|.+. +++.||||+++..........+.+|+.+++.++||||+++++++.+...
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 3467888999999999999999843 4678999999876666666789999999999999999999999999999
Q ss_pred eEEEEeccCCCchhhhhccCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC---cEEE
Q 007020 368 RLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF---EAVV 441 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl 441 (621)
.++||||+++|+|.+++..... ....+++..++.++.||++||+|||++ +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999986432 223589999999999999999999999 999999999999999555 5999
Q ss_pred cccccceecccCC-CeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHH
Q 007020 442 GDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 442 ~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.... ..+...
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--------~~~~~~ 297 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQEVLE 297 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHH
Confidence 9999998653222 122334558899999999999999999999999999999998 999996321 112222
Q ss_pred HHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 520 GLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 520 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
........ .. .......+.+++..||+.||++||++.+|++.|+.
T Consensus 298 ~i~~~~~~------~~----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 298 FVTSGGRM------DP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHTTCCC------CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCCCC------CC----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 22111111 01 11223578899999999999999999999999976
No 51
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.3e-43 Score=378.05 Aligned_cols=263 Identities=24% Similarity=0.412 Sum_probs=213.4
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
..+++..++|.+.+.||+|+||+||+|.+.++..||||+++... .....+.+|+.+++.++||||+++++++. .+..
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 44566778899999999999999999999888999999997543 34567999999999999999999999986 5678
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 332 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR 332 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence 999999999999999975321 1378889999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
..............++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+...........
T Consensus 333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~~ 404 (454)
T 1qcf_A 333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--------NPEVIRALERGYRM 404 (454)
T ss_dssp GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHHHHHTCCC
T ss_pred EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCC
Confidence 654322112223346789999999999999999999999999999999 999995221 11222222111111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
.. +..++..+.+++..||+.||++|||+++|++.|++...
T Consensus 405 ---~~-------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 405 ---PR-------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ---CC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ---CC-------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 11 12234678999999999999999999999999998643
No 52
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.9e-42 Score=351.15 Aligned_cols=264 Identities=22% Similarity=0.301 Sum_probs=202.1
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
..++|++.+.||+|+||+||+|...+|+.||+|+++..... .....+.+|+++++.++||||+++++++.++...++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 35788999999999999999999988999999999754432 23456889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 8888877643 2388999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc--
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM-- 529 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 529 (621)
... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ...+ ..+...........
T Consensus 172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~-~~i~~~~~~~~~~~~~ 245 (311)
T 3niz_A 172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD----DDQL-PKIFSILGTPNPREWP 245 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST----TTHH-HHHHHHHCCCCTTTSG
T ss_pred Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh----HHHH-HHHHHHHCCCChHHhh
Confidence 322 2334468999999999976 4589999999999999999999999963221 1112 11111111100000
Q ss_pred --------------ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 530 --------------LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 530 --------------~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
................++.+++..|++.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 246 QVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000011112357889999999999999999999976
No 53
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.3e-43 Score=357.26 Aligned_cols=264 Identities=27% Similarity=0.416 Sum_probs=214.8
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEc------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeee
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCM 363 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 363 (621)
+++..++|...+.||+|+||+||+|.+ .+++.||||+++..........+.+|+.+++++ +||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 455667899999999999999999974 357899999998766555667899999999999 8999999999999
Q ss_pred cCCceEEEEeccCCCchhhhhccCCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 007020 364 TPTERLLVYPYMANGSVASCLRERPPS--------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAA 429 (621)
Q Consensus 364 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 429 (621)
..+..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||++ +|+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 999999999999999999999875421 23489999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCccccccc
Q 007020 430 NILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLA 507 (621)
Q Consensus 430 Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~ 507 (621)
||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-- 252 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-- 252 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc--
Confidence 999999999999999999876544332 2334457889999999999999999999999999999999 999996321
Q ss_pred CCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 508 NDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
........+. .. ..... .......+.+++..|++.||.+|||+.++++.|++
T Consensus 253 --~~~~~~~~~~----~~-----~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 253 --VDSKFYKMIK----EG-----FRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp --SSHHHHHHHH----HT-----CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --chhHHHHHhc----cC-----CCCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 1111111111 11 00100 11223678999999999999999999999999976
No 54
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.2e-42 Score=356.06 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=201.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC-------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------- 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 366 (621)
.++|+..+.||+|+||.||+|++. +|+.||||+++..........+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357888999999999999999976 799999999986665556678999999999999999999999986543
Q ss_pred --------------------------------------------------ceEEEEeccCCCchhhhhccCCCCCCCCCH
Q 007020 367 --------------------------------------------------ERLLVYPYMANGSVASCLRERPPSQLPLDW 396 (621)
Q Consensus 367 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 396 (621)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27999999999999999987543 223566
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCCC-----------eeeecccccc
Q 007020 397 PTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-----------HVTTAVRGTI 465 (621)
Q Consensus 397 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~ 465 (621)
..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77899999999999999999 999999999999999999999999999987654321 1223346999
Q ss_pred cccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHH
Q 007020 466 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVE 545 (621)
Q Consensus 466 ~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 545 (621)
.|+|||++.+..++.++||||||+++|||++|..|+.... ........ . . ..........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----------~~~~~~~~-~-----~----~~~~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----------RIITDVRN-L-----K----FPLLFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----------HHHHHHHT-T-----C----CCHHHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----------HHHHHhhc-c-----C----CCcccccCCh
Confidence 9999999999999999999999999999999988763110 11111100 0 0 1111233446
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 546 QLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 546 ~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+.+++..||+.||++|||++|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 7789999999999999999999976
No 55
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.3e-42 Score=348.90 Aligned_cols=261 Identities=27% Similarity=0.437 Sum_probs=201.9
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
++..++|.+.+.||+|+||+||+|.+. ..+|+|+++.... ......+.+|+.+++.++||||+++++++. .+..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEE
Confidence 345578999999999999999999874 3599999876443 334567899999999999999999999865 556899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 109 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred EEecCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 999999999999997543 2489999999999999999999999 9999999999999999999999999999865
Q ss_pred ccC-CCeeeecccccccccchhhhc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 451 DYK-DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 451 ~~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
... .........||+.|+|||++. +..++.++||||||+++|||++|+.||.... .. +.+........
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~----~~----~~~~~~~~~~~ 254 (307)
T 3lb7_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN----NR----DQIIFMVGRGY 254 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC----CH----HHHHHHHHHTC
T ss_pred ccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC----cH----HHHHHHHhcCC
Confidence 431 222334456999999999986 5668889999999999999999999996321 11 11111111111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
..+.+. .....++..+.+++..||+.+|++||++.+|++.|+.
T Consensus 255 ----~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 255 ----ASPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp ----CCCCST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred ----CCcchh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 111110 0111233678999999999999999999999999876
No 56
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.9e-43 Score=354.55 Aligned_cols=257 Identities=22% Similarity=0.379 Sum_probs=207.4
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
++..++|+..+.||+|+||+||+|.+.++..||+|+++.... ...++.+|++++..++||||+++++++.+....++|
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 344678888999999999999999998888999999975432 345689999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 98 TEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp ECCCTTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EeccCCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999999999976322 389999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
...........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||.... ..+......... ..
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--------~~~~~~~~~~~~---~~ 240 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--------NSETAEHIAQGL---RL 240 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHHTTC---CC
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--------hhHHHHHHhccc---CC
Confidence 322222233446788999999999999999999999999999998 999996321 111111111110 01
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
..+. .....+.+++..||+.+|++|||++++++.|++
T Consensus 241 ~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 241 YRPH-------LASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp CCCT-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCC-------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 1111 112578899999999999999999999999976
No 57
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.5e-42 Score=354.71 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=200.3
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 371 (621)
++|+..+.||+|+||+||+|+.. +++.||+|+++.... ......+.+|..++..+ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888999999999999999975 689999999976542 23345688999999887 899999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999997643 389999999999999999999999 99999999999999999999999999998543
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||................+.........
T Consensus 162 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---- 236 (345)
T 3a8x_A 162 RP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---- 236 (345)
T ss_dssp CT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----
T ss_pred CC-CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----
Confidence 22 2234456799999999999999999999999999999999999999964222111111111222211111111
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKM 565 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 565 (621)
.+ +......+.+++..|++.||++||++
T Consensus 237 --~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 --RI----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --CC----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred --CC----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 11223678899999999999999996
No 58
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.8e-43 Score=362.36 Aligned_cols=265 Identities=25% Similarity=0.389 Sum_probs=213.7
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcCC------CcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeee
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFC 362 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 362 (621)
.++...++|...+.||+|+||+||+|.... ...||+|.++..........+.+|+.+++.+ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 456677899999999999999999998642 3489999998766556667899999999999 899999999999
Q ss_pred ecCCceEEEEeccCCCchhhhhccCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCee
Q 007020 363 MTPTERLLVYPYMANGSVASCLRERPP----------SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANIL 432 (621)
Q Consensus 363 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 432 (621)
...+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999875321 123478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCC
Q 007020 433 LDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDD 510 (621)
Q Consensus 433 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~ 510 (621)
++.++.+||+|||++......... ......+|..|+|||.+.+..++.++||||||+++|||++ |..||.... .
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~----~ 272 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL----V 272 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----S
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc----h
Confidence 999999999999999876543322 2334457889999999999999999999999999999999 999996321 1
Q ss_pred cchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 511 DVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.......+.. ... ...+ ......+.+++..||+.||.+|||+.+|++.|++
T Consensus 273 ~~~~~~~~~~----~~~--~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 273 NSKFYKLVKD----GYQ--MAQP-------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323 (333)
T ss_dssp SHHHHHHHHH----TCC--CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHHHHhc----CCC--CCCC-------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence 1111111111 100 0011 1123678899999999999999999999999987
No 59
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.9e-42 Score=353.01 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=204.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|+..+.||+|+||+||+|+.. +|+.||+|+++... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367888999999999999999865 68999999997542 122345688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999997643 388999999999999999999999 99999999999999999999999999998543
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+........ ..
T Consensus 157 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~-~~---- 222 (337)
T 1o6l_A 157 SD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILME-EI---- 222 (337)
T ss_dssp CT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHC-CC----
T ss_pred cC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHcC-CC----
Confidence 22 223345679999999999999999999999999999999999999995321 11222222211 10
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-----KMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 570 (621)
.+ +......+.+++..|++.||++|| +++++++
T Consensus 223 --~~----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 --RF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --CC----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --CC----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11 112236788999999999999999 8888865
No 60
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.1e-43 Score=358.54 Aligned_cols=256 Identities=25% Similarity=0.417 Sum_probs=200.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCc----EEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
.++|+..+.||+|+||+||+|.+. +++ .||+|.++..........+.+|+.+++.++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467888999999999999999864 444 368888876555555678999999999999999999999998754 78
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+|+||+.+|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999987432 389999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 450 MDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 450 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
....... ......+|..|+|||++.+..++.++|||||||++|||++ |+.||+... .......+.. ...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~---~~~- 237 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEK---GER- 237 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHT---TCC-
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHHc---CCC-
Confidence 6543322 2233457889999999999999999999999999999999 999996322 1112121111 100
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
..........+.+++..||+.+|++||++.++++.|+..
T Consensus 238 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 238 ---------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp ---------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 001112336788999999999999999999999999874
No 61
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=349.31 Aligned_cols=251 Identities=18% Similarity=0.248 Sum_probs=205.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|.+.+.||+|+||+||+|... +++.||+|.++.. ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 467889999999999999999865 6889999998643 3345568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC--CCcEEEcccccceecc
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMD 451 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~~~ 451 (621)
|+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||++....
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 82 FISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred eCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 999999999997643 2489999999999999999999999 9999999999999987 7899999999998765
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
... ......||+.|+|||++.+..++.++||||||+++|+|++|..||.... ..+.+......... .
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~---~ 222 (321)
T 1tki_A 156 PGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNAEYT---F 222 (321)
T ss_dssp TTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCC---C
T ss_pred CCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHcCCCC---C
Confidence 332 3344569999999999998888999999999999999999999996321 11222222211110 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+.. .....+..+.+++..|+..||++|||+.|+++
T Consensus 223 ~~~----~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 223 DEE----AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CHH----HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Chh----hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 100 11122467889999999999999999999987
No 62
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-42 Score=360.98 Aligned_cols=266 Identities=17% Similarity=0.202 Sum_probs=202.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCC------CcEEEEEEecccCCchh----------HHHHHHHHHHHHhccCCceee
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLAD------GSLVAVKRLKEERTPGG----------ELQFQTEVEMISMAVHRNLLR 357 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~ 357 (621)
..++|.+.+.||+|+||+||+|.+.. ++.||||++........ ...+..|+..+..++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998754 47899999865432110 011334555667788999999
Q ss_pred eeeeeecC----CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee
Q 007020 358 LRGFCMTP----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL 433 (621)
Q Consensus 358 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 433 (621)
+++++... ...++||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4579999999 999999998742 2489999999999999999999999 99999999999999
Q ss_pred C--CCCcEEEcccccceecccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccccc
Q 007020 434 D--EEFEAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505 (621)
Q Consensus 434 ~--~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~ 505 (621)
+ .++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 8899999999999876533211 1133459999999999999999999999999999999999999997321
Q ss_pred ccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 506 LANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.......+...... ..+..+.++.+.. ...+..+.+++..||+.+|++||++++|++.|++
T Consensus 266 ----~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 266 ----KDPKYVRDSKIRYR-ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp ----TCHHHHHHHHHHHH-HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHHhh-hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 11122222221111 1222222222211 1123678899999999999999999999999876
No 63
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.4e-41 Score=350.16 Aligned_cols=258 Identities=17% Similarity=0.193 Sum_probs=206.2
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|.+.+.||+|+||+||+|.. .+|+.||||++..... ...+.+|+.+++.+ +||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 46788999999999999999985 4789999999865432 23588999999999 8999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc-----EEEcccccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLA 447 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~DfGla 447 (621)
||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EeC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999 899999998642 2489999999999999999999999 9999999999999998887 999999999
Q ss_pred eecccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH
Q 007020 448 KLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGL 521 (621)
Q Consensus 448 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 521 (621)
+........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.... .....+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i 232 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK-----ADTLKERYQKI 232 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CSSHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc-----cccHHHHHHHH
Confidence 876543321 1235569999999999999999999999999999999999999996322 11111222211
Q ss_pred hhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 522 LKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 522 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
...... ..... .....+ .+.+++..||+.||.+||++++|++.|++
T Consensus 233 ~~~~~~---~~~~~---~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 233 GDTKRA---TPIEV---LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp HHHHHH---SCHHH---HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred Hhhhcc---CCHHH---HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 111000 00000 001122 78999999999999999999999999976
No 64
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-42 Score=350.90 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=205.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-----hhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
.+.|...+.||+|+||.||+|... +|+.||+|.++..... .....+.+|+.+++.++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456888999999999999999875 6899999999754422 1356789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC----cEEEccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 444 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Df 444 (621)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999997643 389999999999999999999999 999999999999999887 8999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
|+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+........
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANVSAV 232 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHT
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHHhc
Confidence 9998765332 2234569999999999998999999999999999999999999995221 11111111111
Q ss_pred cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 525 KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 525 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ..............+.+++..|++.||++|||+.++++
T Consensus 233 ~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 233 N-------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C-------CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C-------CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00111111122367889999999999999999999976
No 65
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-42 Score=350.84 Aligned_cols=265 Identities=25% Similarity=0.412 Sum_probs=204.1
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-----CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC--C
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--T 366 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 366 (621)
..++|++.+.||+|+||+||+|++ .+++.||||+++... ......+.+|+.+++.++||||+++++++... .
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 356788899999999999999983 368899999987543 44456789999999999999999999998653 5
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 68999999999999999987532 388999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCC--eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccccccc-------CCCcchHHHH
Q 007020 447 AKLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLA-------NDDDVMLLDW 517 (621)
Q Consensus 447 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~-------~~~~~~~~~~ 517 (621)
+........ .......++..|+|||.+.+..++.++||||||+++|||++|..||...... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987653322 1223344778899999999999999999999999999999999998632210 0011111111
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+........ ........+..+.+++..||+.||++|||++++++.|++
T Consensus 241 ~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 241 LIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 111111110 111122334679999999999999999999999999976
No 66
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=356.45 Aligned_cols=246 Identities=28% Similarity=0.369 Sum_probs=196.1
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCce
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 368 (621)
+..++|+..+.||+|+||+||+|+.. +|+.||||+++... .......+..|..++..+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999865 68999999997542 122345678899999987 699999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 99999999999999997643 289999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 173 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~--- 240 (353)
T 3txo_A 173 EGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDE--- 240 (353)
T ss_dssp CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC---
T ss_pred ecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC---
Confidence 53322 223445679999999999999899999999999999999999999996321 112222222211
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCH
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKM 565 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 565 (621)
..-+ ......+.+++..|++.||++||++
T Consensus 241 -~~~p-------~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 241 -VVYP-------TWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -CCCC-------TTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -CCCC-------CCCCHHHHHHHHHHhhhCHHHccCC
Confidence 0111 1123568899999999999999998
No 67
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.9e-42 Score=364.89 Aligned_cols=263 Identities=19% Similarity=0.267 Sum_probs=209.5
Q ss_pred HHHHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeec
Q 007020 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMT 364 (621)
Q Consensus 288 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 364 (621)
+.+++...++|+..++||+|+||+||+|+.. +++.||+|++++... ......+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455667789999999999999999999976 578999999965321 1122248899999999999999999999999
Q ss_pred CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccc
Q 007020 365 PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 444 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 444 (621)
.+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 999999999999999999998632 2389999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
|+|+..............||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+...
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~--------~~~~~~ 291 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYG 291 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC--------hhHHHH
Confidence 999876655444455567999999999997 4568999999999999999999999996321 111122
Q ss_pred HHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 007020 520 GLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMD--RPKMSEVVR 570 (621)
Q Consensus 520 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~~vl~ 570 (621)
.+..... ...-+.... .....+.+++..|+..+|++ ||+++|+++
T Consensus 292 ~i~~~~~--~~~~p~~~~----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 292 KIMNHKE--RFQFPTQVT----DVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHTHHH--HCCCCSSCC----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhhhccc--cccCCcccc----cCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 2221110 011111111 12357888999999988888 999999865
No 68
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.3e-42 Score=345.54 Aligned_cols=254 Identities=29% Similarity=0.451 Sum_probs=194.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCc---hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP---GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|+..+.||+|+||.||+|.+. ++.||||+++..... .....+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999985 889999998754322 2245688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC--------CCcEEEcc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE--------EFEAVVGD 443 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--------~~~~kl~D 443 (621)
|||+++++|.+++... .+++..+..++.|+++||+|||+++..+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 3899999999999999999999992112999999999999986 67899999
Q ss_pred cccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007020 444 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 523 (621)
Q Consensus 444 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
||++....... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .........
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~ 228 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG--------LAVAYGVAM 228 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHHHHT
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHhhhc
Confidence 99998654322 2234699999999999999999999999999999999999999963210 111111111
Q ss_pred hcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 524 EKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 524 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. ............+.+++..||+.||++|||+.|+++.|+.
T Consensus 229 ~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 229 NK---------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp SC---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CC---------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11 0011112233678999999999999999999999999975
No 69
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.3e-42 Score=354.38 Aligned_cols=256 Identities=21% Similarity=0.303 Sum_probs=205.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC----CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER----TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
.+.|++.+.||+|+||+||+|... +|+.||||++.... .......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467889999999999999999864 68999999986422 1123567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc---EEEccccc
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGL 446 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfGl 446 (621)
+||||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988876433344589999999999999999999999 9999999999999986654 99999999
Q ss_pred ceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
+....... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .+.........
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~- 248 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGK- 248 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTC-
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCC-
Confidence 98765432 22344569999999999999899999999999999999999999996321 11111111111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ..++.. .......+.+++..||+.||++|||+.++++
T Consensus 249 ~--~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 Y--KMNPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp C--CCCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--CCCccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 011110 1122367889999999999999999999985
No 70
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-42 Score=373.18 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=206.9
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
.+++..++|.+.+.||+|+||+||+|.+.++..||||+++.... ....+.+|+.+++.++||||+++++++.+ +..+
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence 34556788999999999999999999998888899999976442 34578999999999999999999999876 6789
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 255 iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp EEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred EEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCcccee
Confidence 9999999999999997532 12388999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
.............++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+...........
T Consensus 330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~~- 400 (452)
T 1fmk_A 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQVERGYRM- 400 (452)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHHTTCCC-
T ss_pred cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCC-
Confidence 65433223334457889999999999999999999999999999999 999995221 11222222111110
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
..+..++..+.+++..||+.||++|||+++|++.|++..
T Consensus 401 ---------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 401 ---------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 011223467899999999999999999999999998854
No 71
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=360.92 Aligned_cols=254 Identities=17% Similarity=0.243 Sum_probs=205.0
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|++.+.||+|+||+||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4577999999999999999999864 7899999999765433 3345689999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC---CCCcEEEcccccce
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAK 448 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGla~ 448 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999998754 389999999999999999999999 999999999999998 56789999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||.... ..+........ ..
T Consensus 162 ~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~~-~~- 230 (444)
T 3soa_A 162 EVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--------QHRLYQQIKAG-AY- 230 (444)
T ss_dssp CCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHT-CC-
T ss_pred EecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHhC-CC-
Confidence 765432 22344569999999999999899999999999999999999999995221 11112221111 11
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
....+ ........+.+++..|++.||++|||+.|+++
T Consensus 231 ~~~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 231 DFPSP-----EWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCCTT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCcc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 01111 11122367889999999999999999999976
No 72
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.8e-41 Score=353.41 Aligned_cols=254 Identities=19% Similarity=0.270 Sum_probs=206.0
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|.+.+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999865 689999999976543 33445789999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC---CcEEEcccccce
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAK 448 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla~ 448 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999999987643 389999999999999999999999 99999999999999865 459999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... ........... ...
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--------~~~~~~~i~~~-~~~ 248 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYAQIKAG-AYD 248 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHT-CCC
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhC-CCC
Confidence 765322 2334569999999999999899999999999999999999999995321 11122221111 100
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
. ...........+.+++..||+.||++||++.++++.
T Consensus 249 -~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 -Y-----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -C-----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -C-----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 011112233678899999999999999999999864
No 73
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.7e-43 Score=352.70 Aligned_cols=261 Identities=28% Similarity=0.412 Sum_probs=215.6
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
++++..++|+..+.||+|+||+||+|.+. ++..||+|.++... .....+.+|+.+++.++||||+++++++.+....
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 34556778999999999999999999876 48899999997543 3456789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred EEEEEcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 999999999999999987433 3488999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
..............+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... ....+.+.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~~~~~~~~---~--- 228 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEK---D--- 228 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHT---T---
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhc---c---
Confidence 766554444455567889999999999999999999999999999999 9999963221 111111111 1
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.... .....+..+.+++..|++.||++|||++++++.|+..
T Consensus 229 ---~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 ---YRME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp ---CCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCC----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 0111 1112236789999999999999999999999999874
No 74
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-42 Score=355.67 Aligned_cols=260 Identities=25% Similarity=0.370 Sum_probs=207.1
Q ss_pred CCcCceeeeccCceEEEEEcC-----CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC--CceEE
Q 007020 298 FSNKNILGRGGFGKVYKGRLA-----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLL 370 (621)
Q Consensus 298 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 370 (621)
|+..+.||+|+||+||++.+. +++.||||+++..........+.+|+++++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 388899999999999988642 68899999998766556667899999999999999999999999874 67799
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999997643 88999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCCe--eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccccccc------CCCcchHHHHHHHHh
Q 007020 451 DYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLA------NDDDVMLLDWVKGLL 522 (621)
Q Consensus 451 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~------~~~~~~~~~~~~~~~ 522 (621)
...... ......++..|+|||++.+..++.++||||||+++|+|++|..||...... ..........+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 263 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL- 263 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH-
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH-
Confidence 544332 223345888899999999988999999999999999999999999633211 00000000001111
Q ss_pred hhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 523 KEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 523 ~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.............+..+.+++..||+.||++|||++++++.|+.
T Consensus 264 --------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 264 --------LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --------HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11111111122334689999999999999999999999999986
No 75
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.6e-42 Score=353.24 Aligned_cols=263 Identities=27% Similarity=0.430 Sum_probs=212.3
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEc--------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeee
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRL--------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFC 362 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 362 (621)
++..++|.+.+.||+|+||+||+|.+ .++..||||+++..........+.+|+.+++.+ +||||+++++++
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 44567899999999999999999985 246789999998766555667799999999999 899999999999
Q ss_pred ecCCceEEEEeccCCCchhhhhccCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 007020 363 MTPTERLLVYPYMANGSVASCLRERPPS------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAAN 430 (621)
Q Consensus 363 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 430 (621)
.+.+..++||||+++|+|.+++...... ...+++..+..++.||++||+|||+. +|+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 9999999999999999999999875421 12388999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccC
Q 007020 431 ILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLAN 508 (621)
Q Consensus 431 ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~ 508 (621)
|+++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--- 264 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--- 264 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC---
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC---
Confidence 99999999999999999876543322 2233447889999999998889999999999999999999 999995221
Q ss_pred CCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 509 DDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
..+.......... ... .......+.+++..||+.+|++|||+.++++.|+..
T Consensus 265 -----~~~~~~~~~~~~~------~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 265 -----VEELFKLLKEGHR------MDK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp -----HHHHHHHHHHTCC------CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----HHHHHHHHhcCCC------CCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1122222111111 111 112236788999999999999999999999999874
No 76
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.4e-41 Score=348.06 Aligned_cols=266 Identities=24% Similarity=0.348 Sum_probs=190.8
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|+..+.||+|+||+||+|... +|+.||+|.++..........+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457888999999999999999865 6899999999766544445678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 374 YMANGSVASCLRERP--PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|++ |+|.+++.... .....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 1223488999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc----
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK---- 526 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---- 526 (621)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+........
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----EEQLKLIFDIMGTPNESLW 233 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCTTTC
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCChhHh
Confidence 3322 22344689999999999764 589999999999999999999999963221 111111111110000
Q ss_pred --ccc--ccCccc------------cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 527 --LEM--LVDPDL------------QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 527 --~~~--~~d~~~------------~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
... ...+.. ...........+.+++..|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000 000000 00000112357889999999999999999999865
No 77
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.7e-42 Score=348.36 Aligned_cols=264 Identities=24% Similarity=0.387 Sum_probs=206.7
Q ss_pred hcCCCcCceeeeccCceEEEEEc-----CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC--Cc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 367 (621)
.+.|+..+.||+|+||.||+|.+ .+++.||+|+++..........+.+|+.+++.++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35578889999999999999983 368999999998665555567899999999999999999999999876 66
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 8999999999999999965432 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCe--eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccc-------cCCCcchHHHHH
Q 007020 448 KLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL-------ANDDDVMLLDWV 518 (621)
Q Consensus 448 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~-------~~~~~~~~~~~~ 518 (621)
......... ......||..|+|||.+.+..++.++||||||+++|+|++|..|+..... ............
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 876544332 23345588889999999999999999999999999999999998753210 011111111111
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
....... ........+..+.+++..||+.||++|||+.++++.|+.
T Consensus 254 ~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 254 NTLKEGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 1111111 011112234678999999999999999999999999975
No 78
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-42 Score=355.63 Aligned_cols=270 Identities=26% Similarity=0.408 Sum_probs=217.1
Q ss_pred cCHHHHHHHhcCCCcCceeeeccCceEEEEEc------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeee
Q 007020 286 FSLRELQVATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRL 358 (621)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 358 (621)
+....++...++|.+.+.||+|+||+||+|.+ .+++.||||+++..........+.+|+.++..+ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 45667777889999999999999999999973 357899999998766555666799999999999 79999999
Q ss_pred eeeeecCC-ceEEEEeccCCCchhhhhccCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 007020 359 RGFCMTPT-ERLLVYPYMANGSVASCLRERPPS------------QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRD 425 (621)
Q Consensus 359 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 425 (621)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987754 489999999999999999875432 12278899999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCccc
Q 007020 426 VKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDL 503 (621)
Q Consensus 426 lk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~ 503 (621)
|||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |..||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987644332 23334558899999999999999999999999999999998 9999963
Q ss_pred ccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 504 ARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.. ... ........... .... ......+.+++..||+.||.+|||+.++++.|+..
T Consensus 254 ~~----~~~---~~~~~~~~~~~------~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VK----IDE---EFCRRLKEGTR------MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CC----CSH---HHHHHHHHTCC------CCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cc----hhH---HHHHHhccCcc------CCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 22 111 11111111110 0111 11235788999999999999999999999999763
No 79
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=349.09 Aligned_cols=250 Identities=25% Similarity=0.371 Sum_probs=196.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-------------------------hhHHHHHHHHHHHH
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-------------------------GGELQFQTEVEMIS 348 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~ 348 (621)
.++|.+.+.||+|+||+||+|... +++.||||++...... .....+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467889999999999999999864 6889999998654321 11245889999999
Q ss_pred hccCCceeeeeeeeec--CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 007020 349 MAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDV 426 (621)
Q Consensus 349 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 426 (621)
.++||||+++++++.+ ....++||||+++|+|.+++... ++++..+..++.||++||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-----PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 56789999999999999876532 389999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCC---CCCcccchhHHHHHHHHHhCCCCccc
Q 007020 427 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGIMLLELITGQRAFDL 503 (621)
Q Consensus 427 k~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~pf~~ 503 (621)
||+|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. .+.++||||||+++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 234456999999999997765 37789999999999999999999963
Q ss_pred ccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 504 ARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ...+..... ..... .+. .......+.+++..||+.||++|||+.|+++
T Consensus 243 ~~--------~~~~~~~~~-~~~~~---~~~-----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ER--------IMCLHSKIK-SQALE---FPD-----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SS--------HHHHHHHHH-HCCCC---CCS-----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cc--------HHHHHHHHh-cccCC---CCC-----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 112211111 11111 010 0112357889999999999999999999865
No 80
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-42 Score=344.35 Aligned_cols=255 Identities=25% Similarity=0.430 Sum_probs=209.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
..++|...+.||+|+||.||+|.+.+++.||+|.++.... ....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 3567888999999999999999988889999999976542 24578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999986432 388999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
.........++..|+|||++.+..++.++||||||+++|+|++ |+.||.... ..+.......... ...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~i~~~~~---~~~ 226 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDISTGFR---LYK 226 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCC---CCC
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--------HHHHHHHHhcCCc---CCC
Confidence 2122223447788999999999999999999999999999999 899996321 1122222211110 011
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+. .....+.+++..||+.||++||++.++++.|++
T Consensus 227 ~~-------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 227 PR-------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp CT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Cc-------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11 123678899999999999999999999999976
No 81
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.3e-42 Score=370.94 Aligned_cols=252 Identities=28% Similarity=0.411 Sum_probs=205.5
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC-ceEE
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLL 370 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~l 370 (621)
++..++|.+.+.||+|+||+||+|.+. |+.||||+++... ....|.+|+.+++.++||||+++++++.... ..++
T Consensus 189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred ccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 345678888999999999999999985 7899999997543 3457899999999999999999999987665 7899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++..... ..+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 265 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEECCTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 9999999999999986532 2368899999999999999999999 9999999999999999999999999999854
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... .....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ... +.........
T Consensus 340 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~~~---~~~i~~~~~~-- 405 (450)
T 1k9a_A 340 SST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDV---VPRVEKGYKM-- 405 (450)
T ss_dssp C----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----TTH---HHHHHTTCCC--
T ss_pred ccc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHH---HHHHHcCCCC--
Confidence 322 122357889999999999999999999999999999998 9999963221 111 1111111110
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
. .+..++..+.+++..||+.||++|||+.++++.|+.
T Consensus 406 ----~----~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 406 ----D----APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp ----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----C----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1 112234688999999999999999999999999976
No 82
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.8e-42 Score=345.59 Aligned_cols=259 Identities=28% Similarity=0.455 Sum_probs=210.6
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
++++..++|.+.+.||+|+||+||+|...+++.||+|.++.... ....+.+|+++++.++||||+++++++. .+..+
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 83 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIY 83 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc--cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcE
Confidence 34556678999999999999999999988888999999875432 3457899999999999999999999986 45689
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++..
T Consensus 84 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL 158 (279)
T ss_dssp EEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence 9999999999999997532 12388999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
.............++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~-- 228 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVIQNLERGYR-- 228 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHHTTCC--
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--------HHHHHHHHhcccC--
Confidence 65443333334457889999999998889999999999999999999 999995321 1122222211110
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
... .......+.+++..|++.||++|||++++++.|++
T Consensus 229 ----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 229 ----MVR----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp ----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCC----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 111 11223678899999999999999999999999987
No 83
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=5.6e-41 Score=340.30 Aligned_cols=260 Identities=15% Similarity=0.167 Sum_probs=207.5
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|.+.+.||+|+||+||+|.. .+|+.||||++..... ...+.+|+.+++.+ +|+|++++++++.+....++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 356789999999999999999985 5789999999865432 23578899999998 799999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc-----EEEccccc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGL 446 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~DfGl 446 (621)
|||+ +++|.+++..... ++++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 8999999986532 389999999999999999999999 9999999999999987776 99999999
Q ss_pred ceecccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH
Q 007020 447 AKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKG 520 (621)
Q Consensus 447 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 520 (621)
++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~ 232 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-----NKQKYER 232 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-----HHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc-----cHHHHHH
Confidence 9876543321 2344569999999999999999999999999999999999999996422111 1111111
Q ss_pred HhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 521 LLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 521 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
........ ..+.. ....+..+.+++..||+.||++||++++|++.|++
T Consensus 233 ~~~~~~~~--~~~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~ 280 (298)
T 1csn_A 233 IGEKKQST--PLREL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280 (298)
T ss_dssp HHHHHHHS--CHHHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred HHhhccCc--cHHHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 11110000 00000 11223678999999999999999999999999987
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-41 Score=344.05 Aligned_cols=262 Identities=23% Similarity=0.328 Sum_probs=199.1
Q ss_pred cCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
++|+..+.||+|+||+||+|...+|+.||+|.++..... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999888999999999654422 2235688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 454 (621)
+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 9999887643 2388999999999999999999999 99999999999999999999999999998654322
Q ss_pred CeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc-----
Q 007020 455 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE----- 528 (621)
Q Consensus 455 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 528 (621)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+..........
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----ADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTG
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHHCCCChhhchhh
Confidence 2 22334589999999999764 589999999999999999999999963211 11111111110000000
Q ss_pred ---cccCcccc-------CcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 529 ---MLVDPDLQ-------NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 529 ---~~~d~~~~-------~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...++... ..........+.+++..|++.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00011100 0111123467889999999999999999999976
No 85
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.7e-42 Score=350.03 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=194.9
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCce---
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER--- 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 368 (621)
.++|++.+.||+|+||+||+|.+ .+++.||||+++.... ......+.+|+.+++.++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999996 4789999999976542 23345688999999999999999999998765443
Q ss_pred -EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 369 -LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 369 -~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
++||||+++|+|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999997643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCC--eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 448 KLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 448 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
+....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--------PVSVAYQHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCC
Confidence 87654322 22234568999999999999999999999999999999999999996321 111111111111
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
... +. .........+.+++..||+.||++||++.+++.
T Consensus 236 ~~~----~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIP----PS---ARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCC----HH---HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCC----cc---cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 110 00 001112367889999999999999998777665
No 86
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.5e-42 Score=353.55 Aligned_cols=264 Identities=24% Similarity=0.410 Sum_probs=195.0
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcCCC----cEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeec
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLADG----SLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMT 364 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 364 (621)
++.+..++|++.+.||+|+||+||+|.+... ..||||+++... .......+.+|+.+++.++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 3445567899999999999999999987543 279999997653 33445679999999999999999999999987
Q ss_pred CCce------EEEEeccCCCchhhhhccCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC
Q 007020 365 PTER------LLVYPYMANGSVASCLRERP--PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 436 (621)
Q Consensus 365 ~~~~------~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 436 (621)
.... ++||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence 7655 99999999999999986532 2233589999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchH
Q 007020 437 FEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVML 514 (621)
Q Consensus 437 ~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~ 514 (621)
+.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ...
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~ 248 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEI 248 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGH
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHH
Confidence 99999999999876433221 2223447789999999999999999999999999999999 9999963221 111
Q ss_pred HHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 515 LDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 515 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
. ......... . ........+.+++..||+.||++|||+.++++.|++
T Consensus 249 ~---~~~~~~~~~------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 249 Y---NYLIGGNRL------K----QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295 (323)
T ss_dssp H---HHHHTTCCC------C----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred H---HHHhcCCCC------C----CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1 111111110 0 111223678999999999999999999999999987
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=351.19 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=202.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467888999999999999999865 68899999986532 122345688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 94 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999998643 389999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCeeeecccccccccchhhhcc---CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+...... .
T Consensus 167 ~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~~~-~-- 236 (384)
T 4fr4_A 167 RE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-----TSSKEIVHTFETT-V-- 236 (384)
T ss_dssp TT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT-----SCHHHHHHHHHHC-C--
T ss_pred CC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhhc-c--
Confidence 32 23345679999999999974 4578999999999999999999999963221 1111222221110 0
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPK-MSEVVR 570 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-~~~vl~ 570 (621)
.. ++......+.+++..||+.||++||+ +++|.+
T Consensus 237 ----~~----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 ----VT----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ----cC----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 00 11122367899999999999999998 666543
No 88
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.5e-42 Score=351.31 Aligned_cols=269 Identities=24% Similarity=0.403 Sum_probs=217.2
Q ss_pred cCHHHHHHHhcCCCcCceeeeccCceEEEEEcC------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeee
Q 007020 286 FSLRELQVATDSFSNKNILGRGGFGKVYKGRLA------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLR 359 (621)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 359 (621)
+..+++++..++|.+.+.||+|+||.||+|.+. +++.||+|.+...........+.+|+.+++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 345566777889999999999999999999754 36789999998766555666799999999999999999999
Q ss_pred eeeecCCceEEEEeccCCCchhhhhccCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee
Q 007020 360 GFCMTPTERLLVYPYMANGSVASCLRERP------PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL 433 (621)
Q Consensus 360 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 433 (621)
+++.+.+..++||||+++|+|.+++.... ....++++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 99999999999999999999999987521 1123478899999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCc
Q 007020 434 DEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDD 511 (621)
Q Consensus 434 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~ 511 (621)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 245 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------ 245 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC------
Confidence 99999999999999865433221 1223346889999999999999999999999999999999 899985321
Q ss_pred chHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 512 VMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
..+......... .. .. .......+.+++..||+.||++|||+.++++.|++.
T Consensus 246 --~~~~~~~~~~~~-~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 246 --NEQVLRFVMEGG-LL-----DK----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp --HHHHHHHHHTTC-CC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred --HHHHHHHHHcCC-cC-----CC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 112222221111 10 01 112236788999999999999999999999999875
No 89
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.6e-42 Score=356.36 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=202.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcE----EEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSL----VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
.++|...+.||+|+||+||+|.+. +++. ||+|.+...........+.+|+.+++.++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357888899999999999999864 4443 88888765443344456788999999999999999999986 56789
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 9999999999999997642 2378889999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 450 MDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 450 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... .......|+..|+|||++.+..++.++||||||+++|||++ |+.||.... .....+.+. ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~---~~~-- 234 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-----LAEVPDLLE---KGE-- 234 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----TTHHHHHHH---TTC--
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-----HHHHHHHHH---cCC--
Confidence 654332 22344558889999999999999999999999999999999 999996321 111111111 111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
....+. .....+.+++..||+.||++||++.++++.|+...
T Consensus 235 -~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 235 -RLAQPQ-------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp -BCCCCT-------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred -CCCCCC-------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011111 12246788999999999999999999999998753
No 90
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-41 Score=344.43 Aligned_cols=246 Identities=27% Similarity=0.352 Sum_probs=203.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++.... ......+.+|..+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357888999999999999999875 689999999975421 12345678899999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999998643 388999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~------ 219 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNAE------ 219 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHCC------
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC------
Confidence 32 234569999999999999999999999999999999999999995321 112222222211
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-----KMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 570 (621)
.... ......+.+++..|++.||++|| +++++++
T Consensus 220 -~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 220 -LRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -CCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCC----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 0111 11235788999999999999999 7888764
No 91
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.2e-42 Score=344.99 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=204.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCC----CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
..++|.+.+.||+|+||+||+|.+.+ +..||+|.++..........+.+|+.+++.++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45688889999999999999998532 346999999876656667789999999999999999999999765 4578
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999997643 2388999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
.............++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....+.+. ....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~~~~~~---~~~~-- 232 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDVIGVLE---KGDR-- 232 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGHHHHHH---HTCC--
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHHHHHHh---cCCC--
Confidence 65443333344557889999999999999999999999999999998 9999953211 11111111 1110
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
... .......+.+++..||+.||++||++.++++.|++.
T Consensus 233 -~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 233 -LPK-------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp -CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCC-------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 001 111235788999999999999999999999999873
No 92
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.9e-41 Score=341.55 Aligned_cols=263 Identities=22% Similarity=0.288 Sum_probs=200.1
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
++|+..+.||+|+||+||+|... +++.||+|+++..... .....+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47888999999999999999875 6899999999755433 334678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 5655555432 2389999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCeeeecccccccccchhhhccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc----
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE---- 528 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 528 (621)
. .......||..|+|||++.+.. ++.++|||||||++|||++|..||.... ........+..........
T Consensus 155 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 155 V-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp C-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTT
T ss_pred c-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhh
Confidence 2 2233456899999999998766 7999999999999999999988863211 1111111111111000000
Q ss_pred --cccC---------ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 529 --MLVD---------PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 529 --~~~d---------~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...+ ..............+.+++..|++.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 00000111123467889999999999999999999976
No 93
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-42 Score=361.87 Aligned_cols=263 Identities=21% Similarity=0.260 Sum_probs=207.9
Q ss_pred CHHHHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeee
Q 007020 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCM 363 (621)
Q Consensus 287 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 363 (621)
.+++.....++|+..+.||+|+||+||+|+.. +|+.||+|++++... ......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555667789999999999999999999975 799999999965321 122335889999999999999999999999
Q ss_pred cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcc
Q 007020 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 443 (621)
Q Consensus 364 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 443 (621)
+.+..++||||+++|+|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 99999999999999999999976421 389999999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCeeeecccccccccchhhhc-------cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007020 444 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-------TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLD 516 (621)
Q Consensus 444 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 516 (621)
||+++..............||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~ 277 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS--------TAE 277 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHH
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC--------HHH
Confidence 9999876654443444567999999999997 3568999999999999999999999996321 111
Q ss_pred HHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 007020 517 WVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDR---PKMSEVVR 570 (621)
Q Consensus 517 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R---Pt~~~vl~ 570 (621)
....+...... ...+.. .......+.+++..|+. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~~--~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKEH--LSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHHH--CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhcccC--cCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 12222211100 001111 11223678899999999 99998 58888854
No 94
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-41 Score=350.96 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=205.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.+.|.+.+.||+|+||+||+|... +|+.||+|++.... ......+.+|+.+++.++||||+++++++.+....++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 367899999999999999999865 68999999987543 3345578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC--CCcEEEcccccceecc
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMD 451 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~~~ 451 (621)
|+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 999999999987643 2489999999999999999999999 9999999999999974 5789999999998765
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
... ......||+.|+|||++.+..++.++|||||||++|||++|..||.... ..+.+........ ..
T Consensus 203 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~i~~~~~---~~ 269 (387)
T 1kob_A 203 PDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--------DLETLQNVKRCDW---EF 269 (387)
T ss_dssp TTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHCCC---CC
T ss_pred CCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC---CC
Confidence 432 2333469999999999999999999999999999999999999996321 1112222211110 01
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
++.. .......+.+++..||+.||++|||+.++++.
T Consensus 270 ~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 DEDA----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CSST----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Cccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1111 11223678899999999999999999999763
No 95
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.6e-41 Score=346.52 Aligned_cols=249 Identities=24% Similarity=0.301 Sum_probs=193.9
Q ss_pred hcCCCcCceeeeccCceEEEEEc----CCCcEEEEEEecccCC---chhHHHHHHHHHHHHhccCCceeeeeeeeecCCc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL----ADGSLVAVKRLKEERT---PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 367 (621)
.++|++.+.||+|+||+||+++. .+|+.||+|+++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999986 4789999999976532 2234457889999999999999999999999999
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999997643 288899999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
+..... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.... ..+.+.......
T Consensus 169 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~-- 237 (327)
T 3a62_A 169 KESIHD-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--------RKKTIDKILKCK-- 237 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTC--
T ss_pred cccccC-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCC--
Confidence 754322 222344569999999999999899999999999999999999999996321 112222222211
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-----KMSEVVR 570 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 570 (621)
..+ +......+.+++..||+.||++|| ++.++++
T Consensus 238 -----~~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 -----LNL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -----CCC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -----CCC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011 111236788999999999999999 6667654
No 96
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-41 Score=340.61 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=199.8
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|...+.||+|+||+||+|... ++..||+|++...........+.+|+++++.++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 367888999999999999999864 6899999999876655556789999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---CCCCcEEEcccccceec
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~ 450 (621)
|+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999865322234489999999999999999999999 99999999999999 45678999999999865
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
... .......||..|+|||++. ..++.++||||||+++|||++|+.||.... ..+.............
T Consensus 178 ~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~~- 245 (285)
T 3is5_A 178 KSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS--------LEEVQQKATYKEPNYA- 245 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC-
T ss_pred CCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC--------HHHHHhhhccCCcccc-
Confidence 432 2233456999999999985 568899999999999999999999996321 1111111111110000
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ... ....+.+++..|++.||++|||+.|+++
T Consensus 246 ~~---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VE---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C-----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cc---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 001 1257889999999999999999999975
No 97
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.6e-41 Score=342.48 Aligned_cols=253 Identities=30% Similarity=0.554 Sum_probs=201.4
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhH------HHHHHHHHHHHhccCCceeeeeeeeecCCc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGE------LQFQTEVEMISMAVHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 367 (621)
.++|+..+.||+|+||+||+|.+. +++.||+|++......... ..+.+|+.+++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467888999999999999999864 7899999998654432211 56899999999999999999999986654
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeeCCCCc-----EE
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK--IIHRDVKAANILLDEEFE-----AV 440 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~-----~k 440 (621)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999999887643 2489999999999999999999999 8 999999999999988776 99
Q ss_pred EcccccceecccCCCeeeecccccccccchhhhc--cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007020 441 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS--TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 441 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 518 (621)
|+|||+++.... ......||+.|+|||++. ...++.++||||||+++|||++|+.||..... . ...+.
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---~---~~~~~ 239 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY---G---KIKFI 239 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC---C---HHHHH
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc---c---HHHHH
Confidence 999999974332 234456999999999984 44568899999999999999999999963211 1 11111
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
....... ..+.. .......+.+++..||+.||++|||++++++.|++
T Consensus 240 ~~~~~~~-----~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 240 NMIREEG-----LRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHHSC-----CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHhccC-----CCCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1111111 11111 12233678999999999999999999999999976
No 98
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=358.40 Aligned_cols=271 Identities=18% Similarity=0.234 Sum_probs=214.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC--ceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 371 (621)
.++|.+.+.||+|+||+||+|.+. +|+.||||+++..........+.+|+++++.++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467889999999999999999875 589999999976554445567889999999999999999999988765 67999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee----CCCCcEEEcccccc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLA 447 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfGla 447 (621)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999986432 22389999999999999999999999 99999999999999 77888999999999
Q ss_pred eecccCCCeeeecccccccccchhhhcc--------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLST--------GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
+...... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||.......... +.+.
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~----~~~~ 237 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK----EVMY 237 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH----HHHH
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH----HHHH
Confidence 8764322 2234569999999999875 456789999999999999999999997433222222 2222
Q ss_pred HHhhhcccccc------c--------CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 520 GLLKEKKLEML------V--------DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 520 ~~~~~~~~~~~------~--------d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
........... . +..............+.+++..|++.||++||+++++++.+++.
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 22222111000 0 00111233466778899999999999999999999999988774
No 99
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.1e-41 Score=342.04 Aligned_cols=263 Identities=28% Similarity=0.460 Sum_probs=197.9
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
++..++|++.+.||+|+||+||+|++. ..||+|+++.... ......+.+|+.+++.++||||+++++++ .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 445678999999999999999999874 3599999976543 33456799999999999999999999965 5567899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 97 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 999999999999997543 2489999999999999999999999 9999999999999999999999999999865
Q ss_pred ccC-CCeeeecccccccccchhhhc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 451 DYK-DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 451 ~~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
... .........||+.|+|||++. +..++.++||||||+++|+|++|+.||.... ... . +........
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~---~-~~~~~~~~~ 242 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN----NRD---Q-IIEMVGRGS 242 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC----CHH---H-HHHHHHHTS
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc----hHH---H-HHHHhcccc
Confidence 432 122233456999999999986 5667889999999999999999999996321 111 1 111111111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
.. +.. .......+..+.+++..||+.+|++|||+.++++.|++..
T Consensus 243 ~~----~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 243 LS----PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CC----CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cC----cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11 110 0011223467999999999999999999999999998753
No 100
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=346.51 Aligned_cols=247 Identities=24% Similarity=0.293 Sum_probs=194.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 370 (621)
..++|+..++||+|+||+||+|... +|+.||||++..... ......+..|+..+..+ +||||+++++++.+.+..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4468999999999999999999876 799999999865432 23334555666665555 89999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+ +++|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 135 v~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999 669998887643 2489999999999999999999999 9999999999999999999999999999875
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
... .......||+.|+|||++.+ .++.++|||||||++|||++|..||.... .| ... ....
T Consensus 208 ~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~-~~~-~~~~---- 268 (311)
T 3p1a_A 208 GTA--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GW-QQL-RQGY---- 268 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HH-HHH-TTTC----
T ss_pred ccC--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HH-HHH-hccC----
Confidence 432 22334569999999999876 78999999999999999999976663211 11 111 1100
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+. ........+.+++..|++.||++|||++|+++
T Consensus 269 ~~~~----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 269 LPPE----FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCcc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1111 11223467899999999999999999999986
No 101
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-41 Score=344.85 Aligned_cols=269 Identities=25% Similarity=0.369 Sum_probs=203.8
Q ss_pred HHHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHh--ccCCceeeeeeeeecC
Q 007020 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM--AVHRNLLRLRGFCMTP 365 (621)
Q Consensus 288 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 365 (621)
........++|++.+.||+|+||.||+|++. ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 3344556689999999999999999999985 899999998543 23344556666554 4899999999998877
Q ss_pred ----CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCeeeCCC
Q 007020 366 ----TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC-----DPKIIHRDVKAANILLDEE 436 (621)
Q Consensus 366 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~Nill~~~ 436 (621)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ +++|+||||||+|||++.+
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence 6789999999999999999764 2899999999999999999999762 3489999999999999999
Q ss_pred CcEEEcccccceecccCCCee---eecccccccccchhhhccCCCCCc------ccchhHHHHHHHHHhC----------
Q 007020 437 FEAVVGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTGKSSEK------TDVFGYGIMLLELITG---------- 497 (621)
Q Consensus 437 ~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGvil~elltg---------- 497 (621)
+.+||+|||++.......... .....||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 999999999998664332221 124469999999999988776655 9999999999999999
Q ss_pred CCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCc-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 498 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNN-YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 498 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
..||....... ... ..+......... .+..... ...++...+.+++..||+.||++|||+.+|++.|+.
T Consensus 259 ~~p~~~~~~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 259 QLPYHDLVPSD---PSY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCTTTTTSCSS---CCH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccHhhhcCCC---Cch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 55553221111 111 111222211111 1111111 123567889999999999999999999999999987
No 102
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.5e-42 Score=341.56 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=204.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecC--CceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 371 (621)
.++|...+.||+|+||+||+|++. ++.||||+++.... ......+.+|+.+++.++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999985 88999999976543 34455799999999999999999999999887 788999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999987532 3489999999999999999999998 7 99999999999999999999999988764
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCC---cccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE---KTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
... ....||+.|+|||.+.+...+. ++||||||+++|||++|+.||.... ..+.........
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~- 227 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS--------NMEIGMKVALEG- 227 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC--------HHHHHHHHHHSC-
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC--------hHHHHHHHHhcC-
Confidence 322 2235899999999998765544 7999999999999999999996221 111111111111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
..+.. .......+.+++..||+.||++|||++++++.|+..
T Consensus 228 ----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 228 ----LRPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp ----CCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11111 112236789999999999999999999999999863
No 103
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.9e-42 Score=352.69 Aligned_cols=246 Identities=23% Similarity=0.371 Sum_probs=200.2
Q ss_pred cCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|.+.+.||+|+||+||+|.+ .+++.||+|++..... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999996 4789999999864321 122346889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 679999887643 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
. .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||+....... ...+.
T Consensus 161 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------------~~~i~ 221 (336)
T 3h4j_B 161 G--NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------------FKKVN 221 (336)
T ss_dssp S--BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------------BCCCC
T ss_pred C--cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------------HHHHH
Confidence 2 22334569999999999988775 7899999999999999999999964321110 00000
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
... ...+......+.+++..|++.||.+|||++|+++
T Consensus 222 ~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000 0011122367889999999999999999999975
No 104
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=9.3e-43 Score=354.18 Aligned_cols=264 Identities=23% Similarity=0.341 Sum_probs=190.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHh--ccCCceeeeeeeeecCC----ce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM--AVHRNLLRLRGFCMTPT----ER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~ 368 (621)
.++|.+.+.||+|+||+||+|++. |+.||||+++.. ....+..|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 467999999999999999999885 889999998643 34457778888876 78999999999998776 78
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeeeCCCCcEE
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--------DHCDPKIIHRDVKAANILLDEEFEAV 440 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~k 440 (621)
++||||+++|+|.+++.... +++..+..++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHHCC-----BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhccC-----cchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 99999999999999997642 777889999999999999999 77 999999999999999999999
Q ss_pred EcccccceecccCCCee---eecccccccccchhhhccC------CCCCcccchhHHHHHHHHHhC----------CCCc
Q 007020 441 VGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGIMLLELITG----------QRAF 501 (621)
Q Consensus 441 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~pf 501 (621)
|+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 99999998765443322 2334699999999999776 334689999999999999999 5565
Q ss_pred ccccccCCCcchHHHHHHHHhhhcccccccCccccCcc-cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCCcc
Q 007020 502 DLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNY-VEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAE 579 (621)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~~ 579 (621)
.............. .. .... ...+.....+ ..+....+.+++..||+.||++|||+++|++.|+.....+
T Consensus 229 ~~~~~~~~~~~~~~---~~-~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 229 YDLVPSDPSVEEMR---KV-VCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TTTCC-CCCCC-CH---HH-HTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cccCCCCccHHHHH---HH-HHHh----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 42221111111111 11 1111 1112211111 2256678999999999999999999999999999866543
No 105
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.4e-41 Score=349.41 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=202.4
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCc
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 367 (621)
....++|.+.+.||+|+||+||+|+.. +|+.||+|+++.... ......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 455678999999999999999999975 689999999975421 22344677889988876 89999999999999999
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 999999999999999998643 289999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 166 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-- 234 (345)
T 1xjd_A 166 KENMLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFHSIRMDN-- 234 (345)
T ss_dssp BCCCCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC--
T ss_pred hhcccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCC--
Confidence 854322 223445679999999999999999999999999999999999999996321 111222221111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMS-EVV 569 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~-~vl 569 (621)
+... ......+.+++..|++.||++||++. +|+
T Consensus 235 -----~~~p----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -----PFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----CCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----CCCC----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1111 11236788999999999999999997 553
No 106
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-41 Score=343.13 Aligned_cols=255 Identities=23% Similarity=0.353 Sum_probs=206.9
Q ss_pred hcCCCcCc-eeeeccCceEEEEEcC---CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 295 TDSFSNKN-ILGRGGFGKVYKGRLA---DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 295 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
.++|.+.+ .||+|+||.||+|.+. ++..||||+++..........+.+|+++++.++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35566665 8999999999999853 57889999998765556667899999999999999999999999 4567899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 999999999999997532 2489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCee--eecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 451 DYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 451 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .. +..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~---~~~~~i~~~~~- 231 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GP---EVMAFIEQGKR- 231 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----TH---HHHHHHHTTCC-
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----HH---HHHHHHhcCCc-
Confidence 5433322 122346889999999998889999999999999999998 999996321 11 11111111110
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+.. ....+..+.+++..||+.||++||++.++++.|+.
T Consensus 232 -----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 269 (287)
T 1u59_A 232 -----MEC----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269 (287)
T ss_dssp -----CCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CCC----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 12234678999999999999999999999999987
No 107
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-41 Score=347.09 Aligned_cols=257 Identities=28% Similarity=0.450 Sum_probs=202.4
Q ss_pred hcCCCcCceeeeccCceEEEEEcCC-----CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLAD-----GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
.++|...+.||+|+||+||+|.... +..||||.++..........+.+|+.+++.++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4567778999999999999998642 24699999987665556667999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 9999999999999998643 2389999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCe--eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 450 MDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 450 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
....... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--------NHEVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHCCCc
Confidence 6533221 1222346788999999999999999999999999999999 999995221 1122222211111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.. ........+.+++..||+.+|++||++.++++.|+..
T Consensus 269 ~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 269 LP----------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp CC----------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00 0112236788999999999999999999999999763
No 108
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-42 Score=353.63 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=197.4
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccC--CceeeeeeeeecCCceEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVH--RNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l 370 (621)
..++|++.+.||+|+||+||++...+++.||||++..... ......+.+|+.++..++| +||+++++++.++...++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 3567889999999999999999988899999999975543 3344678999999999986 999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||| +.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++..
T Consensus 87 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEe-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 999 56789999998753 388999999999999999999999 999999999999997 578999999999876
Q ss_pred ccCCCe-eeecccccccccchhhhcc-----------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007020 451 DYKDTH-VTTAVRGTIGHIAPEYLST-----------GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 451 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 518 (621)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ......
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~ 230 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKL 230 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-------hHHHHH
Confidence 543222 2334569999999999975 668899999999999999999999995211 011111
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.... ++.............+.+++..||+.||++|||+.++++.
T Consensus 231 ~~~~---------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 HAII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHh---------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 1111111111123578899999999999999999999864
No 109
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.7e-41 Score=348.40 Aligned_cols=262 Identities=22% Similarity=0.244 Sum_probs=202.4
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC----CchhHHHHHHHHHHHHhccCCceeeeeeeeecC
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER----TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 365 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 365 (621)
+....++|.+.+.||+|+||+||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4556788999999999999999999864 68899999986532 234456799999999999999999999999999
Q ss_pred CceEEEEeccCCCchhhhhccCCCC------------------------------------CCCCCHHHHHHHHHHHHHH
Q 007020 366 TERLLVYPYMANGSVASCLRERPPS------------------------------------QLPLDWPTRKRIALGSARG 409 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~~~~~~~~~i~~~i~~~ 409 (621)
+..++||||+++|+|.+++...... ...+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999998631100 1123567788999999999
Q ss_pred HHHHHhCCCCCeEecCCCCCCeeeCCCC--cEEEcccccceecccCCC---eeeecccccccccchhhhcc--CCCCCcc
Q 007020 410 LSYLHDHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDT---HVTTAVRGTIGHIAPEYLST--GKSSEKT 482 (621)
Q Consensus 410 L~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 482 (621)
|+|||+. +|+||||||+||+++.++ .+||+|||++........ .......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999987644222 12344569999999999975 5788999
Q ss_pred cchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCC
Q 007020 483 DVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDR 562 (621)
Q Consensus 483 DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R 562 (621)
||||||+++|||++|+.||.... ..+.+......... ...+ ........+.+++..|++.||++|
T Consensus 258 DiwslG~il~el~~g~~pf~~~~--------~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVN--------DADTISQVLNKKLC--FENP-----NYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCC--TTSG-----GGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCC--------hHHHHHHHHhcccc--cCCc-----ccccCCHHHHHHHHHHcCCChhHC
Confidence 99999999999999999995321 11222222211110 0111 111223678899999999999999
Q ss_pred CCHHHHHH
Q 007020 563 PKMSEVVR 570 (621)
Q Consensus 563 Pt~~~vl~ 570 (621)
|++.++++
T Consensus 323 ps~~~~l~ 330 (345)
T 3hko_A 323 FDAMRALQ 330 (345)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99999987
No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.9e-41 Score=347.56 Aligned_cols=245 Identities=22% Similarity=0.293 Sum_probs=202.9
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|...+.||+|+||+||+|+.. +|+.||+|+++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999875 689999999865421 223456889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999998643 289999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.... .
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~----- 255 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVSGK-V----- 255 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C-----
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHcCC-C-----
Confidence 2 234569999999999999999999999999999999999999996321 112222222211 1
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPK-----MSEVVR 570 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-----~~~vl~ 570 (621)
.+ +......+.+++..|++.||++||+ +++|++
T Consensus 256 -~~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 -RF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -CC----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CC----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11 1122367889999999999999998 777754
No 111
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.9e-41 Score=349.89 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=199.7
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCce
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 368 (621)
...++|...+.||+|+||+||+|+.. +|+.||+|+++.... ......+..|..++..+ +||||+++++++.+.+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 34578999999999999999999976 578999999975421 22345678899999887 799999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 99999999999999998643 289999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.... .
T Consensus 170 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-~- 238 (353)
T 2i0e_A 170 ENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN-V- 238 (353)
T ss_dssp CCCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C-
T ss_pred ccccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCC-C-
Confidence 54322 223445679999999999999999999999999999999999999996321 112222222211 0
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCH
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKM 565 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 565 (621)
.. +......+.+++..|++.||++||++
T Consensus 239 -----~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 239 -----AY----PKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -----CC----CTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred -----CC----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11 11223678899999999999999964
No 112
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.4e-41 Score=350.83 Aligned_cols=209 Identities=22% Similarity=0.296 Sum_probs=183.1
Q ss_pred cccccCHHHHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-----CCce
Q 007020 282 QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-----HRNL 355 (621)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~ni 355 (621)
....+++++.....++|.+.+.||+|+||+||+|... +++.||||+++.. ......+..|+.+++.+. ||||
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 4456677777788899999999999999999999874 6899999998642 334456788999999886 9999
Q ss_pred eeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC
Q 007020 356 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE 435 (621)
Q Consensus 356 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 435 (621)
+++++++...+..++||||+ +++|.+++...... .+++..+..++.||+.||+|||++ +|+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN--GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDD 172 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESC
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcc
Confidence 99999999999999999999 88999999875432 388999999999999999999999 9999999999999975
Q ss_pred -------------------------CCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHH
Q 007020 436 -------------------------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIM 490 (621)
Q Consensus 436 -------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvi 490 (621)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 789999999999864432 234568999999999999999999999999999
Q ss_pred HHHHHhCCCCcc
Q 007020 491 LLELITGQRAFD 502 (621)
Q Consensus 491 l~elltg~~pf~ 502 (621)
+|||++|+.||.
T Consensus 249 l~ell~g~~pf~ 260 (360)
T 3llt_A 249 LAELYTGSLLFR 260 (360)
T ss_dssp HHHHHHSSCSCC
T ss_pred HHHHHHCCCCCC
Confidence 999999999996
No 113
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=347.03 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=189.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
..+.|.+.+.||+|+||+||+|... +++.||||+++... ....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 3567889999999999999999976 58899999997543 2346789999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla~~ 449 (621)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 128 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 9999999999997643 389999999999999999999999 9999999999999975 88999999999986
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ... .......... ..
T Consensus 201 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~---~~~~~i~~~~-~~- 269 (349)
T 2w4o_A 201 VEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER----GDQ---FMFRRILNCE-YY- 269 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT----CHH---HHHHHHHTTC-CC-
T ss_pred cCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc----ccH---HHHHHHHhCC-Cc-
Confidence 5432 22334569999999999999999999999999999999999999995221 111 1111111111 00
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ..........+.+++..|++.||++|||+.++++
T Consensus 270 ~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 270 FI-----SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CC-----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cC-----CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 1111223467889999999999999999999976
No 114
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=350.00 Aligned_cols=257 Identities=25% Similarity=0.417 Sum_probs=200.4
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCc----EEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGS----LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
.++|+..+.||+|+||+||+|.+. +++ .||+|.++..........+.+|+.+++.++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467888999999999999999864 444 368888766555556778999999999999999999999998754 88
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+++||+.+|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999999999987532 388999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 450 MDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 450 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... .......+|..|+|||.+.+..++.++||||||+++|||++ |..||.... .....+.+.. ....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~---~~~~ 238 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEK---GERL 238 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHT---TCCC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHc---CCCC
Confidence 643322 12233447889999999999999999999999999999999 999996322 1112121111 1000
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
.........+.+++..||+.||++||++.++++.|+...
T Consensus 239 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 239 ----------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 011122357889999999999999999999999998743
No 115
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-41 Score=353.00 Aligned_cols=253 Identities=23% Similarity=0.276 Sum_probs=194.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|.+.+.||+|+||+||+++.. +++.||||++..... ....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 467889999999999999999975 789999999975432 23468899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc--EEEcccccceecc
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFGLAKLMD 451 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfGla~~~~ 451 (621)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++...
T Consensus 97 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 97 YASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 999999999997643 289999999999999999999999 9999999999999987765 9999999997433
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCc-ccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
.. .......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...... ......+........ ..
T Consensus 170 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~~~~~~~~--~~ 241 (361)
T 3uc3_A 170 LH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP----RDYRKTIQRILSVKY--SI 241 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C----CCHHHHHHHHHTTCC--CC
T ss_pred cc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH----HHHHHHHHHHhcCCC--CC
Confidence 22 22334569999999999988887655 89999999999999999999643221 112222222221110 00
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.+ .......+.+++..||+.||++|||+.|+++.
T Consensus 242 ~~-------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 PD-------DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CT-------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CC-------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 00123578899999999999999999999864
No 116
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.9e-41 Score=334.88 Aligned_cols=253 Identities=24% Similarity=0.377 Sum_probs=205.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|++.+.||+|+||.||+|... +++.||+|++...........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467888999999999999999875 6899999999765555556779999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999997543 388999999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-eeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 454 DT-HVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 454 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. .......|+..|+|||.+.+..+ +.++||||||+++|||++|+.||..... .......|... .. ..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~----~~---~~ 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQEYSDWKEK----KT---YL 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT---TSHHHHHHHTT----CT---TS
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHhhhc----cc---cc
Confidence 22 12334568999999999987665 7789999999999999999999963221 11122222111 00 00
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+ .......+.+++..|++.||++|||++++++
T Consensus 229 ~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NP------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred Cc------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00 1122357889999999999999999999965
No 117
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.6e-42 Score=376.97 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=212.1
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
..+++..++|.+.+.||+|+||+||+|.+.++..||||+++.... ....|.+|+++++.++|+||+++++++.+ +..
T Consensus 260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 345666788999999999999999999998888899999976442 34579999999999999999999999876 678
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 411 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 411 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred eEeeehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence 999999999999999975321 2388999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
..............++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+.+..+......
T Consensus 412 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~~ 483 (535)
T 2h8h_A 412 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQVERGYRM 483 (535)
T ss_dssp TCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--------HHHHHHHHHTTCCC
T ss_pred ecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCC
Confidence 654221112223346789999999999999999999999999999999 999995221 11222222111111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
.....+...+.+++..||+.||++|||+++|++.|+...
T Consensus 484 ----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 484 ----------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 011223467899999999999999999999999998853
No 118
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.5e-41 Score=352.83 Aligned_cols=268 Identities=21% Similarity=0.294 Sum_probs=203.4
Q ss_pred hcCCCcCceeeec--cCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 295 TDSFSNKNILGRG--GFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 295 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
.++|++.+.||+| +||+||+|+.. +|+.||||+++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678899999999 99999999976 799999999976543 3334568889999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++...... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMD--GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999875322 389999999999999999999999 9999999999999999999999999998754
Q ss_pred ccCCC------eeeecccccccccchhhhcc--CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007020 451 DYKDT------HVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 522 (621)
Q Consensus 451 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 522 (621)
..... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ......+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~ 254 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT----QMLLEKLNGTV 254 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST----THHHHC-----
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhcCCC
Confidence 32211 11122368999999999987 57899999999999999999999999632111 11111110000
Q ss_pred hh---------c-------------cccccc---Cc------cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 523 KE---------K-------------KLEMLV---DP------DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 523 ~~---------~-------------~~~~~~---d~------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.. . ...... .+ .............+.+++..||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 0 000000 00 00001122234678999999999999999999999753
No 119
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4e-41 Score=365.55 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=205.5
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|...+.||+|+||+||+|+.. +|+.||+|+++.... ......+..|+.+++.++||||+++++++.+....++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888899999999999999975 699999999965431 12345688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999987554445699999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .............. .
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~----~~~~~~~~~i~~~~-~---- 410 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRVLEQA-V---- 410 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC----CCHHHHHHHHHHCC-C----
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc----hhHHHHHHHHhhcc-c----
Confidence 3322 233457999999999999999999999999999999999999999633211 11122222222111 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMS 566 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ 566 (621)
.. +......+.+++..|++.||++||++.
T Consensus 411 --~~----p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 411 --TY----PDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp --CC----CTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred --CC----CcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 11 112236788999999999999999763
No 120
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.2e-41 Score=344.08 Aligned_cols=257 Identities=24% Similarity=0.352 Sum_probs=204.3
Q ss_pred HHHhcCCCcCc-eeeeccCceEEEEEc---CCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCC
Q 007020 292 QVATDSFSNKN-ILGRGGFGKVYKGRL---ADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 366 (621)
Q Consensus 292 ~~~~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 366 (621)
.+..++|.+.+ .||+|+||+||+|.+ .+++.||||+++.... ......+.+|+.+++.++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 34456777777 999999999999953 2478899999976543 33356799999999999999999999998 567
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 163 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 163 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred CcEEEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCc
Confidence 7899999999999999998753 388999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeee--ecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhh
Q 007020 447 AKLMDYKDTHVT--TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLK 523 (621)
Q Consensus 447 a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
+........... ....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... .. +.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~---~~~~~~~~ 235 (291)
T 1xbb_A 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GS---EVTAMLEK 235 (291)
T ss_dssp CEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HH---HHHHHHHT
T ss_pred ceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----HH---HHHHHHHc
Confidence 987654433222 22346788999999998889999999999999999999 999996321 11 11111111
Q ss_pred hcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 524 EKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 524 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.. .+.. .......+.+++..||+.||++||++.++++.|++
T Consensus 236 ~~------~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 236 GE------RMGC----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp TC------CCCC----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CC------CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11 0111 11233678999999999999999999999999987
No 121
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.7e-41 Score=357.15 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=197.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhcc--CCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAV--HRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 371 (621)
.+.|.+.+.||+|+||+||+|...+++.||||++..... ......+.+|+.+++.++ ||||+++++++..++..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 456999999999999999999988899999999976543 334567899999999996 59999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 56789999998754 388889999999999999999999 999999999999996 5789999999998765
Q ss_pred cCCCe-eeecccccccccchhhhcc-----------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007020 452 YKDTH-VTTAVRGTIGHIAPEYLST-----------GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 452 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-------HHHHHHH
Confidence 33222 2344569999999999875 367889999999999999999999995211 0111122
Q ss_pred HHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 520 GLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 520 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.... +.............+.+++..||+.||++|||+.|+++.
T Consensus 279 ~~~~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhC---------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 2111 111111111113578899999999999999999999864
No 122
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.5e-40 Score=333.10 Aligned_cols=252 Identities=19% Similarity=0.294 Sum_probs=204.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468899999999999999999865 68999999997654 3334567889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc---EEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfGla~~ 449 (621)
||+++|+|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999887643 388999999999999999999999 9999999999999986655 99999999987
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
..... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ........... ...
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~-~~~- 225 (284)
T 3kk8_A 158 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYAQIKAG-AYD- 225 (284)
T ss_dssp CCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHT-CCC-
T ss_pred cccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--------hhHHHHHHHhc-ccc-
Confidence 55332 2334569999999999999999999999999999999999999995221 11111111111 110
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...+. .......+.+++..|++.||++|||++|+++
T Consensus 226 ~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 226 YPSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CCTTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCchh-----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01111 1122357889999999999999999999976
No 123
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-40 Score=339.24 Aligned_cols=261 Identities=21% Similarity=0.269 Sum_probs=199.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.+++.++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999865 688999999975432 22346789999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++++|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999998643 389999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
...........|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ..+........ .
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~~~~~~----~ 252 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------SVMGAHINQAI----P 252 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------HHHHHHHHSCC----C
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------HHHHHHhccCC----C
Confidence 4433334455699999999999988899999999999999999999999963221 11111111111 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCCCc
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-KMSEVVRMLEGDGLA 578 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-t~~~vl~~L~~~~~~ 578 (621)
.+. ......+..+.+++..||+.||++|| +++++++.|+.....
T Consensus 253 ~~~---~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 253 RPS---TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp CGG---GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred Ccc---ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 110 01112235788999999999999999 999999999875443
No 124
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.2e-41 Score=350.48 Aligned_cols=253 Identities=25% Similarity=0.299 Sum_probs=196.2
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHH-HHhccCCceeeeeeeeecCCceEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEM-ISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
++|+..+.||+|+||+||+|+.. +++.||+|++++... ......+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 57888999999999999999975 688999999976532 2233456667766 5678999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999997643 388899999999999999999999 99999999999999999999999999998543
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. ........||+.|+|||++.+..++.++|||||||++|||++|..||.... ..+....+.... .
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-~---- 256 (373)
T 2r5t_A 191 EH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKP-L---- 256 (373)
T ss_dssp CC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHSC-C----
T ss_pred cC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcc-c----
Confidence 22 223445679999999999999999999999999999999999999996321 112222222211 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.+.. .....+.+++..|++.||.+||++.+.+..+...
T Consensus 257 --~~~~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 257 --QLKP----NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp --CCCS----SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred --CCCC----CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 1111 1235788999999999999999987655555444
No 125
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=341.20 Aligned_cols=265 Identities=26% Similarity=0.348 Sum_probs=198.2
Q ss_pred HHhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCC----chhHHHHHHHHHHHHhcc---CCceeeeeeeeec
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERT----PGGELQFQTEVEMISMAV---HRNLLRLRGFCMT 364 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 364 (621)
...++|++.+.||+|+||+||+|.+ .+++.||||+++.... ......+.+|+.+++.+. ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4567999999999999999999996 4789999999864331 112345677887777665 9999999999977
Q ss_pred CC-----ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcE
Q 007020 365 PT-----ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEA 439 (621)
Q Consensus 365 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 439 (621)
.. ..++||||+. |+|.+++...... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPP--GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 55 4799999998 5999999875432 389999999999999999999999 99999999999999999999
Q ss_pred EEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007020 440 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 440 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.
T Consensus 160 kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~ 232 (308)
T 3g33_A 160 KLADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-----EADQLGKIF 232 (308)
T ss_dssp EECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS-----HHHHHHHHH
T ss_pred EEeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHH
Confidence 99999999865432 22344568999999999999999999999999999999999999996321 111111111
Q ss_pred HHhhhcccccc----------cCcc---ccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 520 GLLKEKKLEML----------VDPD---LQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 520 ~~~~~~~~~~~----------~d~~---~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
........... ..+. .......+....+.+++..|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11100000000 0000 000001123367889999999999999999999865
No 126
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=377.11 Aligned_cols=254 Identities=23% Similarity=0.356 Sum_probs=201.4
Q ss_pred cCCCcCc-eeeeccCceEEEEEcC---CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 296 DSFSNKN-ILGRGGFGKVYKGRLA---DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 296 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
+++.+.+ .||+|+||+||+|.+. ++..||||+++.........++.+|+++++.++|||||++++++.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 3444444 7999999999999763 4667999999876555567789999999999999999999999976 568999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 414 ~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EECCTTCBHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEeCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999999999997542 2489999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCee--eecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 452 YKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 452 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .. +.+..+......
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~---~~~~~i~~~~~~- 558 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GP---EVMAFIEQGKRM- 558 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----SH---HHHHHHHTTCCC-
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----HH---HHHHHHHcCCCC-
Confidence 332221 122335689999999999999999999999999999998 999996321 11 112222111111
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
..+..++..+.+++..||+.+|++||++.+|++.|+.
T Consensus 559 ---------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 559 ---------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp ---------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred ---------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1112234689999999999999999999999999987
No 127
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-41 Score=355.43 Aligned_cols=254 Identities=32% Similarity=0.485 Sum_probs=194.3
Q ss_pred CCCcCceeeeccCceEEEEEcC--C--CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec-CCceEEE
Q 007020 297 SFSNKNILGRGGFGKVYKGRLA--D--GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTERLLV 371 (621)
Q Consensus 297 ~~~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 371 (621)
.|...+.||+|+||+||+|.+. + +..||||.++.........++.+|+.+++.++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999853 2 246899999766555667789999999999999999999998754 4678999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++..... .+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999976432 378899999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCe---eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 452 YKDTH---VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 452 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
..... ......+++.|+|||.+.+..++.++||||||+++|||++ |.+||.... .......+. ...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~~~---~~~-- 313 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLL---QGR-- 313 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHHHH---TTC--
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHHHH---cCC--
Confidence 32211 1233457889999999999999999999999999999999 677775321 111211111 111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
....+ ...+..+.+++..||+.||++|||+.++++.|+.
T Consensus 314 -~~~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 314 -RLLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp -CCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111 1223678999999999999999999999999987
No 128
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.1e-41 Score=341.42 Aligned_cols=255 Identities=33% Similarity=0.501 Sum_probs=201.3
Q ss_pred cCCCcCceeeeccCceEEEEEcCC----CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeee-cCCceEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLAD----GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERLL 370 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l 370 (621)
.+|...+.||+|+||+||+|.+.+ ...||+|.++..........+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 467788999999999999998542 23689999987665566678999999999999999999999854 5567899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 999999999999997643 2378999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCC---eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 451 DYKDT---HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 451 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
..... .......+|+.|+|||.+.+..++.++||||||+++|+|++ |.+||.... ....... .....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~~~~---~~~~~- 249 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVY---LLQGR- 249 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----TTTHHHH---HHTTC-
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHH---HhcCC-
Confidence 43221 12233457889999999999999999999999999999999 555664211 1111111 11111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
....+ ......+.+++..||+.||++|||++++++.|++
T Consensus 250 --~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 250 --RLLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp --CCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCCC-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01111 1123578899999999999999999999999977
No 129
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.9e-41 Score=344.01 Aligned_cols=250 Identities=21% Similarity=0.283 Sum_probs=181.2
Q ss_pred CceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CCceeeeeeeeecCCceEEEEeccCCC
Q 007020 301 KNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPYMANG 378 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 378 (621)
.+.||+|+||+||+|.+. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999875 6899999998643 3456789999999997 999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC---cEEEcccccceecccCCC
Q 007020 379 SVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMDYKDT 455 (621)
Q Consensus 379 sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfGla~~~~~~~~ 455 (621)
+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++......
T Consensus 92 ~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 163 (325)
T 3kn6_A 92 ELFERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN- 163 (325)
T ss_dssp BHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-
Confidence 9999998753 389999999999999999999999 999999999999997765 89999999998654332
Q ss_pred eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccc
Q 007020 456 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDL 535 (621)
Q Consensus 456 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 535 (621)
.......||+.|+|||++.+..++.++||||||+++|+|++|+.||......... ....+......... ...
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~-------~~~ 235 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGD-------FSF 235 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTC-------CCC
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCC-------CCC
Confidence 2234456899999999999999999999999999999999999999743321111 11112222221111 011
Q ss_pred cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 536 QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 536 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...........+.+++..|++.||++|||++++++
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11112233467899999999999999999999864
No 130
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=347.66 Aligned_cols=267 Identities=18% Similarity=0.196 Sum_probs=199.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCCchh----------HHHHHHHHHHHHhccCCceeeeee
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGG----------ELQFQTEVEMISMAVHRNLLRLRG 360 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~l~~ 360 (621)
.++|.+.+.||+|+||+||+|... ++..||+|++........ ...+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467888999999999999999875 578899999875532211 123567888899999999999999
Q ss_pred eeec----CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC
Q 007020 361 FCMT----PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 436 (621)
Q Consensus 361 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 436 (621)
++.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9887 67889999999 999999998654 489999999999999999999999 99999999999999887
Q ss_pred C--cEEEcccccceecccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccC
Q 007020 437 F--EAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLAN 508 (621)
Q Consensus 437 ~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~ 508 (621)
+ .+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--- 264 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL--- 264 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT---
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc---
Confidence 7 9999999999876432211 1134469999999999999999999999999999999999999995221
Q ss_pred CCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 509 DDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
.................... ...... ....+..+.+++..||+.||++||++++|++.|+....
T Consensus 265 -~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 265 -KDPVAVQTAKTNLLDELPQS-VLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp -TCHHHHHHHHHHHHHTTTHH-HHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred -cccHHHHHHHHhhcccccHH-HHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111111111110000 000000 00223579999999999999999999999999988544
No 131
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=341.22 Aligned_cols=254 Identities=28% Similarity=0.438 Sum_probs=196.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
.++|++.+.||+|+||+||+|++. ++.||||.+... .....+.+|+.++++++||||+++++++. +..++||||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 357888899999999999999985 788999998642 34567899999999999999999999987 358999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc-EEEcccccceecccC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-AVVGDFGLAKLMDYK 453 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-~kl~DfGla~~~~~~ 453 (621)
+++|+|.+++..... ...+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999986532 123788899999999999999999932228999999999999988886 799999999754322
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCc
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDP 533 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 533 (621)
.....||..|+|||++.+..++.++||||||+++|||++|+.||+.... ............. .+
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~------~~ 223 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG------PAFRIMWAVHNGT------RP 223 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS------SHHHHHHHHHTTC------CC
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc------cHHHHHHHHhcCC------CC
Confidence 2234589999999999999999999999999999999999999963211 1111111111111 11
Q ss_pred cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 534 DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 534 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.. .......+.+++..||+.||++|||++++++.|+..
T Consensus 224 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 224 PL----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp CC----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred Cc----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11 112235788999999999999999999999999874
No 132
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-40 Score=341.09 Aligned_cols=252 Identities=21% Similarity=0.288 Sum_probs=205.5
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCch-----hHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPG-----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
.+.|.+.+.||+|+||.||+|... +|+.||+|.++...... ....+.+|+.+++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467889999999999999999865 68999999997654222 356789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC----cEEEccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 444 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Df 444 (621)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997643 388999999999999999999999 999999999999999887 7999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
|++....... ......||+.|+|||++.+..++.++||||||+++|+|++|..||.... ..+........
T Consensus 164 g~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~ 233 (321)
T 2a2a_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITSV 233 (321)
T ss_dssp TTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTT
T ss_pred ccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhc
Confidence 9998765332 2234569999999999999999999999999999999999999995321 11222221111
Q ss_pred cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 525 KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 525 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ...++.. .......+.+++..|++.||++|||+.++++
T Consensus 234 ~---~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 234 S---YDFDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp C---CCCCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred c---cccChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 0011111 1122357889999999999999999999976
No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=340.35 Aligned_cols=262 Identities=22% Similarity=0.291 Sum_probs=198.2
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
++|+..+.||+|+||+||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999875 5899999998665433 334568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999887543 388999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh--------
Q 007020 454 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-------- 524 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-------- 524 (621)
.. ......||..|+|||++.+ ..++.++||||||+++|+|++|+.||..... ......+......
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-----VDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhcccccccccc
Confidence 22 2334468999999999976 5679999999999999999999999963221 1111111111000
Q ss_pred ----cccc--cccCccccCc---ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 525 ----KKLE--MLVDPDLQNN---YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 525 ----~~~~--~~~d~~~~~~---~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.... ...++..... ........+.+++..||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 0011100000 00123456889999999999999999999976
No 134
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-41 Score=341.41 Aligned_cols=255 Identities=28% Similarity=0.400 Sum_probs=202.2
Q ss_pred CCCcCceeeeccCceEEEEEcC-C---CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCce-EEE
Q 007020 297 SFSNKNILGRGGFGKVYKGRLA-D---GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-LLV 371 (621)
Q Consensus 297 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 371 (621)
.|...+.||+|+||+||+|.+. + +..||+|.+...........+.+|+.+++.++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3455688999999999999853 2 3379999998765555667899999999999999999999999876665 999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+.+|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999998633 2488999999999999999999999 99999999999999999999999999998653
Q ss_pred cCC---CeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 452 YKD---THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 452 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
... ........++..|+|||.+.+..++.++||||||+++|+|++|..|+... .........+.. ...
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~----~~~~~~~~~~~~---~~~-- 246 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH----IDPFDLTHFLAQ---GRR-- 246 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT----SCGGGHHHHHHT---TCC--
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc----CCHHHHHHHhhc---CCC--
Confidence 321 12223445889999999999999999999999999999999966554311 111112222111 110
Q ss_pred cccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 529 MLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 529 ~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
... .......+.+++..||+.||++|||++++++.|++
T Consensus 247 -~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 247 -LPQ-------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp -CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCC-------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 000 11123578899999999999999999999999987
No 135
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.3e-40 Score=342.68 Aligned_cols=268 Identities=23% Similarity=0.322 Sum_probs=211.5
Q ss_pred CHHHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHh--ccCCceeeeeeeeec
Q 007020 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISM--AVHRNLLRLRGFCMT 364 (621)
Q Consensus 287 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 364 (621)
++.......++|.+.+.||+|+||+||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 4445566778999999999999999999998 5899999998642 34567788888887 789999999999987
Q ss_pred CC----ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCee
Q 007020 365 PT----ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--------DHCDPKIIHRDVKAANIL 432 (621)
Q Consensus 365 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nil 432 (621)
.. ..++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 76 789999999999999999764 2889999999999999999999 77 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCCCe---eeecccccccccchhhhccCC------CCCcccchhHHHHHHHHHhC------
Q 007020 433 LDEEFEAVVGDFGLAKLMDYKDTH---VTTAVRGTIGHIAPEYLSTGK------SSEKTDVFGYGIMLLELITG------ 497 (621)
Q Consensus 433 l~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGvil~elltg------ 497 (621)
++.++.+||+|||++......... ......||..|+|||++.+.. ++.++||||||+++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999876654332 223456999999999997763 23689999999999999999
Q ss_pred ----CCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCc-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 007020 498 ----QRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNN-YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 572 (621)
Q Consensus 498 ----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L 572 (621)
..||...... ......+...... . ...+..... ...+....+.+++..||+.||++|||+.+|++.|
T Consensus 260 ~~~~~~p~~~~~~~---~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 260 HEDYQLPYYDLVPS---DPSVEEMRKVVCE-Q----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp CCCCCCTTTTTSCS---SCCHHHHHHHHTT-S----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred ccccccCccccCcC---cccHHHHHHHHHH-H----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 6777532211 1122222222211 1 112222111 1235667899999999999999999999999999
Q ss_pred hcC
Q 007020 573 EGD 575 (621)
Q Consensus 573 ~~~ 575 (621)
+..
T Consensus 332 ~~i 334 (342)
T 1b6c_B 332 SQL 334 (342)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 136
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=346.91 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=194.2
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
++|...+.||+|+||+||+|... +++.||+|+++..........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888999999999999999875 78999999997554333333456799999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 454 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 454 (621)
+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CSE-EHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred ccc-CHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 985 99998876532 388999999999999999999999 99999999999999999999999999998654322
Q ss_pred Ceeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc---cc
Q 007020 455 THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE---ML 530 (621)
Q Consensus 455 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 530 (621)
.......||..|+|||++.+ ..++.++|||||||++|+|++|+.||.... .......+.......... ..
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-----VEEQLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTG
T ss_pred -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChHhchhh
Confidence 22334458999999999976 567999999999999999999999996322 111112222111100000 00
Q ss_pred ---------cCccccC----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 531 ---------VDPDLQN----NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 531 ---------~d~~~~~----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+.... .........+.+++..|++.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 001112356889999999999999999999976
No 137
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-40 Score=339.94 Aligned_cols=261 Identities=21% Similarity=0.334 Sum_probs=198.5
Q ss_pred cCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|.+.+.||+|+||.||+|.. .+|+.||+|+++... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5688889999999999999986 478999999997532 2344567899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999875332334488999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
.. .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.... ............. ...
T Consensus 189 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~~~---- 256 (310)
T 2wqm_A 189 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEQC-DYP---- 256 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHHTT-CSC----
T ss_pred CC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc------hhHHHHHHHhhcc-cCC----
Confidence 22 22234468999999999999999999999999999999999999995321 1111222222111 111
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
... .......+.+++..||+.||++|||+++|++.|+..
T Consensus 257 -~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 257 -PLP---SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp -CCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCc---ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 110 011235788999999999999999999999999873
No 138
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.9e-41 Score=347.37 Aligned_cols=257 Identities=26% Similarity=0.423 Sum_probs=203.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcE--EEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSL--VAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 370 (621)
.++|.+.+.||+|+||.||+|... ++.. ||+|.++..........+.+|++++.++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 367888999999999999999865 4554 4999987655455556789999999999 89999999999999999999
Q ss_pred EEeccCCCchhhhhccCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc
Q 007020 371 VYPYMANGSVASCLRERP------------PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE 438 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 438 (621)
||||+++|+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999998653 2234589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHH
Q 007020 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDW 517 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 517 (621)
+||+|||+++...... ......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~ 250 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAEL 250 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHH
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc--------HHHH
Confidence 9999999997432211 1222347889999999998889999999999999999998 999995321 1122
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
........ .... .......+.+++..||+.||++|||++++++.|+.
T Consensus 251 ~~~~~~~~------~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 251 YEKLPQGY------RLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HHHGGGTC------CCCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhhcCC------CCCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 22211110 1111 11223678899999999999999999999999876
No 139
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.6e-41 Score=346.21 Aligned_cols=252 Identities=20% Similarity=0.288 Sum_probs=200.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|++.+.||+|+||+||+|... +|+.||||++..... ...+|++++.++ +||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 3567999999999999999999875 688999999976542 235688888777 799999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC----CcEEEcccccc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE----FEAVVGDFGLA 447 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla 447 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+..+ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 99999999999997643 389999999999999999999999 99999999999998543 35999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|..||.... .....+........ ..
T Consensus 168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~-~~ 240 (342)
T 2qr7_A 168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-----DDTPEEILARIGSG-KF 240 (342)
T ss_dssp EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-----TSCHHHHHHHHHHC-CC
T ss_pred ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-----cCCHHHHHHHHccC-Cc
Confidence 87654322 2344568999999999988888999999999999999999999996321 11122222222211 11
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ............+.+++..|++.||++||++.++++
T Consensus 241 ~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 S------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp C------CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c------cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 111111223467889999999999999999999875
No 140
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.5e-40 Score=333.23 Aligned_cols=260 Identities=20% Similarity=0.233 Sum_probs=200.8
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeee-ecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC-MTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv 371 (621)
..++|+..+.||+|+||+||+|.. .+++.||||++..... ...+.+|+.+++.++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 457899999999999999999986 5789999998754332 23578899999999988877766655 567788999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---CCCCcEEEcccccce
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAK 448 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~ 448 (621)
|||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 8899999985432 389999999999999999999999 99999999999999 788999999999998
Q ss_pred ecccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007020 449 LMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 522 (621)
Q Consensus 449 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 522 (621)
........ ......||..|+|||.+.+..++.++|||||||++|+|++|+.||......... ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~ 235 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKM 235 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccc
Confidence 76543321 223456999999999999999999999999999999999999999743322211 11111111111
Q ss_pred hhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 523 KEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 523 ~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
. .... ... ...+..+.+++..||+.||++|||+++|++.|++
T Consensus 236 ~-~~~~-----~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (296)
T 4hgt_A 236 S-TPIE-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp H-SCHH-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred c-chhh-----hhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 1 0000 000 1123678999999999999999999999999987
No 141
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1e-40 Score=357.98 Aligned_cols=249 Identities=22% Similarity=0.285 Sum_probs=194.4
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|++.+.||+|+||.||+|... +|+.||||+++... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999864 68999999997542 223344678899999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999997643 38999999999999999999998 8 9999999999999999999999999999854
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... .
T Consensus 300 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~--- 366 (446)
T 4ejn_A 300 IKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEE-I--- 366 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C---
T ss_pred cCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCC-C---
Confidence 322 223345679999999999999999999999999999999999999995321 112222221111 0
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-----KMSEVVR 570 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 570 (621)
.. +......+.+++..||+.||++|| +++|+++
T Consensus 367 ---~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 ---RF----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---CC----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CC----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 111236788999999999999999 9999865
No 142
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=347.36 Aligned_cols=246 Identities=22% Similarity=0.261 Sum_probs=195.2
Q ss_pred CceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEeccCCCc
Q 007020 301 KNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 379 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 379 (621)
.+.||+|+||.||+|... +|+.||+|+++... ......+.+|+++++.++||||+++++++.+.+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 567999999999999864 68999999997643 3445679999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee--CCCCcEEEcccccceecccCCCee
Q 007020 380 VASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLAKLMDYKDTHV 457 (621)
Q Consensus 380 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill--~~~~~~kl~DfGla~~~~~~~~~~ 457 (621)
|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+|||+ +.++.+||+|||+++...... .
T Consensus 173 L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~ 244 (373)
T 2x4f_A 173 LFDRIIDES---YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--K 244 (373)
T ss_dssp EHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--B
T ss_pred HHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--c
Confidence 999887542 2388999999999999999999999 99999999999999 677899999999998765432 2
Q ss_pred eecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccccC
Q 007020 458 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQN 537 (621)
Q Consensus 458 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 537 (621)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.+........ . .. .
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~--~-~~----~ 309 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--------DAETLNNILACRW--D-LE----D 309 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCC--C-SC----S
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhccC--C-CC----h
Confidence 233469999999999998889999999999999999999999996321 1122222222110 0 00 1
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 538 NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 538 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.........+.+++..|++.||++|||+.|+++
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111122367889999999999999999999987
No 143
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.5e-42 Score=350.99 Aligned_cols=267 Identities=27% Similarity=0.356 Sum_probs=208.9
Q ss_pred hcCCCcCceeeeccCceEEEEEc-----CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeee--cCCc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM--TPTE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 367 (621)
.++|+..+.||+|+||.||+|.+ .+++.||||++.... ......+.+|+++++.++||||+++++++. +...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 46788899999999999999983 368899999997543 444567899999999999999999999886 4566
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 8999999999999999976322 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCee--eecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccccccc------C-CCcchHHHHH
Q 007020 448 KLMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLA------N-DDDVMLLDWV 518 (621)
Q Consensus 448 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~------~-~~~~~~~~~~ 518 (621)
.......... .....||..|+|||++.+..++.++||||||+++|+|++|+.||...... . ..........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 8765443322 22345888899999999988999999999999999999999999632211 0 0000111111
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCCc
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLA 578 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 578 (621)
.... ..............+.+++..||+.||++|||++++++.|+.....
T Consensus 255 ~~~~----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 255 ELLE----------EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHH----------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred HHhh----------cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1111 1111111223346789999999999999999999999999886443
No 144
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1e-40 Score=352.32 Aligned_cols=252 Identities=21% Similarity=0.257 Sum_probs=190.6
Q ss_pred cCCCcC-ceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHH-HhccCCceeeeeeeeec----CCce
Q 007020 296 DSFSNK-NILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMI-SMAVHRNLLRLRGFCMT----PTER 368 (621)
Q Consensus 296 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 368 (621)
++|... +.||+|+||+||+|... +|+.||||+++.. ..+.+|++++ +..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 455554 68999999999999865 6899999998632 2467888886 45589999999998865 5678
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEEEcccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFG 445 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfG 445 (621)
++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 999999999999999987532 3489999999999999999999999 9999999999999997 7899999999
Q ss_pred cceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 446 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 446 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+. ..
T Consensus 210 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~i~----~~ 282 (400)
T 1nxk_A 210 FAKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-MKTRIR----MG 282 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-HHHHHH----HT
T ss_pred cccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-HHHHHH----cC
Confidence 99865432 223345689999999999999999999999999999999999999964332211111 111111 11
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
... ...+ ........+.+++..||+.||++|||+.++++.
T Consensus 283 ~~~-~~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 QYE-FPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCC-CCTT-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc-CCCc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 110 0111 011233678899999999999999999999874
No 145
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.2e-40 Score=332.05 Aligned_cols=246 Identities=22% Similarity=0.346 Sum_probs=180.1
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|++.+.||+|+||+||+|.+. +|+.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57899999999999999999864 789999999975432 233557889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+ +++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 668888877643 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ............ .
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~-~---- 229 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGV-Y---- 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-C----
Confidence 22 2234458999999999987765 789999999999999999999996321 111122211111 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. .......+.+++..|++.||++|||++|+++
T Consensus 230 --~~----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 --TL----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CC----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 01 1112356889999999999999999999965
No 146
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-40 Score=349.16 Aligned_cols=201 Identities=26% Similarity=0.400 Sum_probs=162.5
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhcc-CCceeeeeeeeecCC--c
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPT--E 367 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 367 (621)
...++|++.+.||+|+||+||+|.+. +|+.||||++.... .......+.+|+.++..+. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999864 78999999986543 2334556889999999997 999999999997554 6
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||++ |+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999998 5899998763 288899999999999999999999 9999999999999999999999999999
Q ss_pred eecccC--------------------CCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcc
Q 007020 448 KLMDYK--------------------DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFD 502 (621)
Q Consensus 448 ~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~ 502 (621)
+..... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 865321 1112334579999999999986 578999999999999999999999996
No 147
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.7e-40 Score=332.03 Aligned_cols=259 Identities=20% Similarity=0.233 Sum_probs=203.9
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeee-ecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFC-MTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 372 (621)
.++|.+.+.||+|+||+||+|.. .+|+.||||++..... ..++.+|+.+++.++|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46889999999999999999996 5789999999865432 23588999999999988877666655 5667789999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC---CCCcEEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGla~~ 449 (621)
||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||++..
T Consensus 85 e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 8899999975332 389999999999999999999999 999999999999994 788999999999987
Q ss_pred cccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007020 450 MDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 523 (621)
Q Consensus 450 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
....... ......||..|+|||.+.+..++.++||||||+++|||++|+.||........ .............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMS 236 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhcccccC
Confidence 6544321 12345699999999999999999999999999999999999999974332211 1112121111111
Q ss_pred hcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 524 EKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 524 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.... ... ...+..+.+++..||+.||++|||+++|++.|++
T Consensus 237 -~~~~-----~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 237 -TPIE-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp -SCHH-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred -CchH-----HHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 0000 000 1123678999999999999999999999999977
No 148
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=346.93 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=202.0
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCch-------hHHHHHHHHHHHHhccCCceeeeeeeeecC
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTP 365 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 365 (621)
..++|...+.||+|+||+||+|.. .+++.||||+++...... ....+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356899999999999999999985 478999999997653211 233577899999999999999999999999
Q ss_pred CceEEEEeccCCC-chhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccc
Q 007020 366 TERLLVYPYMANG-SVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 444 (621)
Q Consensus 366 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 444 (621)
+..++||||+.+| +|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999877 9999998653 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 523 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
|++....... ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||........
T Consensus 175 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------------- 238 (335)
T 3dls_A 175 GSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE-------------- 238 (335)
T ss_dssp TTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT--------------
T ss_pred ccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh--------------
Confidence 9998765432 2334569999999999988876 7899999999999999999999963211000
Q ss_pred hcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 524 EKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 524 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.....+. .....+.+++..||+.||++|||++++++.
T Consensus 239 ----~~~~~~~-------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 ----AAIHPPY-------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TCCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----hccCCCc-------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000111 123578899999999999999999999774
No 149
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.9e-40 Score=333.28 Aligned_cols=249 Identities=28% Similarity=0.411 Sum_probs=200.5
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
..++|++.+.||+|+||+||+|... +++.||+|++..... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467888999999999999999865 578999999864321 1224568899999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999997643 288999999999999999999999 9999999999999999999999999998654
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+........
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~------ 222 (279)
T 3fdn_A 160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRV------ 222 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHT------
T ss_pred Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHhC------
Confidence 322 2234568999999999999999999999999999999999999996321 11111111111
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.... +......+.+++..|++.||++|||++|+++.
T Consensus 223 -~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 223 -EFTF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -CCCC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -CCCC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0011 11123578899999999999999999999873
No 150
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=345.18 Aligned_cols=265 Identities=26% Similarity=0.339 Sum_probs=206.1
Q ss_pred HHhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeee----cCCc
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM----TPTE 367 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~ 367 (621)
+..++|.+.+.||+|+||.||++.. .+++.||||++... .......+.+|+.+++.++||||+++++++. ....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 3457899999999999999999986 57899999998653 2445567899999999999999999999986 3457
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++.........+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 7999999999999999986433344589999999999999999999999 9999999999999999999999999998
Q ss_pred eecccCCCe--------eeecccccccccchhhhccCC---CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007020 448 KLMDYKDTH--------VTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLD 516 (621)
Q Consensus 448 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 516 (621)
......... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||+........ ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---VAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---HHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---hhH
Confidence 764321110 012234799999999987654 688999999999999999999999632211111 111
Q ss_pred HHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 517 WVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 517 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
.+.. .. ..+ ........+.+++..||+.||.+|||+.++++.|+....
T Consensus 259 ~~~~-----~~---~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 259 AVQN-----QL---SIP-----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HHHC-----C-----CC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred Hhhc-----cC---CCC-----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 1110 00 000 011223678999999999999999999999999988543
No 151
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=348.51 Aligned_cols=270 Identities=25% Similarity=0.358 Sum_probs=197.5
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHH--HHhccCCceeeeeeeee-----cCC
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEM--ISMAVHRNLLRLRGFCM-----TPT 366 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~-----~~~ 366 (621)
..++|.+.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 346788899999999999999987 58999999986432 2334444444 45689999999998543 233
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEecCCCCCCeeeCCCCcEE
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC------DPKIIHRDVKAANILLDEEFEAV 440 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~Nill~~~~~~k 440 (621)
..++||||+++|+|.+++.... .++..+..++.||++||+|||+.+ +++|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 5689999999999999997653 588899999999999999999873 33899999999999999999999
Q ss_pred EcccccceecccCC-------Ceeeecccccccccchhhhcc-------CCCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007020 441 VGDFGLAKLMDYKD-------THVTTAVRGTIGHIAPEYLST-------GKSSEKTDVFGYGIMLLELITGQRAFDLARL 506 (621)
Q Consensus 441 l~DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~elltg~~pf~~~~~ 506 (621)
|+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765322 112234469999999999976 3456789999999999999999888753332
Q ss_pred cCCCcchHH---------HHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 507 ANDDDVMLL---------DWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 507 ~~~~~~~~~---------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
......... ..+............+..... ........+.+++..||+.||++|||++|+++.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 221111111 111111111111111111111 1223566899999999999999999999999999873
No 152
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-40 Score=356.30 Aligned_cols=248 Identities=25% Similarity=0.417 Sum_probs=203.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|.+.+.||+|+||+||+|.+. +|+.||||+++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999875 799999999965421 12345688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 95 ~E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999997643 389999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
... ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||+... ............ .
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--------~~~~~~~i~~~~----~ 233 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--------VPTLFKKICDGI----F 233 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------SHHHHHHHHTTC----C
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHhcCC----c
Confidence 322 2344569999999999988765 689999999999999999999996321 112222221111 0
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+ ......+.+++..|++.||++|||++++++
T Consensus 234 ~~p-------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 YTP-------QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCC-------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCC-------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 011 112257889999999999999999999986
No 153
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.1e-41 Score=340.56 Aligned_cols=250 Identities=28% Similarity=0.412 Sum_probs=207.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.+.|...+.||+|+||.||+|... +++.||+|++...........+.+|+.+++.++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888899999999999999864 6899999999776655566789999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 99999999998753 389999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCc
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDP 533 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 533 (621)
. .......|+..|+|||++.+..++.++||||||+++|+|++|+.||.... ..+....... . ..+
T Consensus 173 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~-----~~~ 237 (303)
T 3a7i_A 173 Q-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--------PMKVLFLIPK-N-----NPP 237 (303)
T ss_dssp B-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHH-S-----CCC
T ss_pred c-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--------HHHHHHHhhc-C-----CCC
Confidence 2 22334568999999999999999999999999999999999999996321 1111111111 1 111
Q ss_pred cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 534 DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 534 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
..... ....+.+++..||+.||++|||+.++++.
T Consensus 238 ~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 TLEGN----YSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCCSS----CCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CCccc----cCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11112 23578899999999999999999999864
No 154
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=352.69 Aligned_cols=256 Identities=25% Similarity=0.332 Sum_probs=204.1
Q ss_pred hcCCCcCceeeeccCceEEEEEc----CCCcEEEEEEecccCC---chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCC
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL----ADGSLVAVKRLKEERT---PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPT 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 366 (621)
.++|.+.+.||+|+||+||+|+. .+++.||||+++.... ......+.+|+.+++.+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36788999999999999999986 3789999999865321 12234577899999999 5999999999999999
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999998643 388999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhccC--CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
++..............||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .............
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKS 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhcc
Confidence 987654333344456799999999999863 4688999999999999999999999633211 1122222222211
Q ss_pred cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 007020 525 KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-----KMSEVVRML 572 (621)
Q Consensus 525 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~~L 572 (621)
.+.. .......+.+++..||+.||++|| +++++++..
T Consensus 282 -------~~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 -------EPPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1111 122235788999999999999999 898887643
No 155
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.3e-40 Score=342.40 Aligned_cols=261 Identities=28% Similarity=0.401 Sum_probs=206.7
Q ss_pred HHhcCCCcCceeeeccCceEEEEEc------CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRL------ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 366 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 366 (621)
+..++|.+.+.||+|+||.||+|.+ .+++.||||.+..........++.+|+.+++.++||||+++++++....
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 3457899999999999999999984 2577899999976655666678999999999999999999999999999
Q ss_pred ceEEEEeccCCCchhhhhccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEE
Q 007020 367 ERLLVYPYMANGSVASCLRERPPS---QLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAV 440 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~k 440 (621)
..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 999999999999999999875422 23488999999999999999999999 9999999999999984 44699
Q ss_pred EcccccceecccCCC-eeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHH
Q 007020 441 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 441 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~ 518 (621)
|+|||++........ .......|++.|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~~ 255 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQEVL 255 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--------HHHHH
Confidence 999999976543222 22234457899999999999999999999999999999998 999995321 11122
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
........ ... .......+.+++..||+.||.+||++.++++.|+.
T Consensus 256 ~~~~~~~~------~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 256 EFVTSGGR------MDP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HHHHTTCC------CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhcCCC------CCC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 21111111 011 11223578899999999999999999999999876
No 156
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-41 Score=341.87 Aligned_cols=258 Identities=22% Similarity=0.325 Sum_probs=204.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeee--cCCceEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLL 370 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 370 (621)
.++|+..+.||+|+||+||+|... +++.||+|.+..... ......+.+|+.+++.++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999875 689999999976543 344567899999999999999999999874 4567899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEecCCCCCCeeeCCCCcEEEcccc
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK-----IIHRDVKAANILLDEEFEAVVGDFG 445 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlk~~Nill~~~~~~kl~DfG 445 (621)
||||+++|+|.+++.........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999986543444589999999999999999999998 7 9999999999999999999999999
Q ss_pred cceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 446 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 446 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++........ ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....... .
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~-~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--------QKELAGKIRE-G 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-T
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--------HHHHHHHHhh-c
Confidence 9976543221 1223458999999999999899999999999999999999999996321 1111111111 1
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
... .+. ......+.+++..||+.||++||++.+|++.+..
T Consensus 232 ~~~-----~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 KFR-----RIP----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCC-----CCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccc-----cCC----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 111 111 1223678899999999999999999999886543
No 157
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9e-41 Score=341.89 Aligned_cols=261 Identities=21% Similarity=0.248 Sum_probs=195.8
Q ss_pred hcCCCcC-ceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHh-ccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNK-NILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISM-AVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv 371 (621)
.+.|.+. +.||+|+||+||+|... +++.||||++.... ......+.+|+.++.+ .+||||+++++++.+.+..++|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 3567774 78999999999999864 78999999997553 3345678899999988 4799999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc---EEEcccccce
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAK 448 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfGla~ 448 (621)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 99999999999998643 388999999999999999999999 9999999999999998776 9999999987
Q ss_pred ecccCCC------eeeecccccccccchhhhcc-----CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCc---ch-
Q 007020 449 LMDYKDT------HVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDD---VM- 513 (621)
Q Consensus 449 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~---~~- 513 (621)
....... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||.........- ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6542211 11223459999999999975 457899999999999999999999996432211000 00
Q ss_pred ---HHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 514 ---LLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 514 ---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
......... .... .............+.+++..|++.||++|||++|+++
T Consensus 243 ~~~~~~~~~~i~-~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQ-EGKY------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHH-HCCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHh-ccCc------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 001111111 1110 0000000112367889999999999999999999976
No 158
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=6.9e-41 Score=364.49 Aligned_cols=255 Identities=24% Similarity=0.304 Sum_probs=205.7
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
..++|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3567888999999999999999875 799999999965321 2234568899999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 262 VmEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 9999999999999976532 2389999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........... ..
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~~~i~~-~~---- 405 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKE-VP---- 405 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHHHHHHH-CC----
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHHHHhhc-cc----
Confidence 5332 2334579999999999999889999999999999999999999996432111 11111111111 10
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRP-----KMSEVVR 570 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~~vl~ 570 (621)
..+ .......+.+++..|++.||++|| +++||++
T Consensus 406 --~~~----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 --EEY----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --CCC----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --ccC----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 111 112236788999999999999999 6777754
No 159
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.4e-41 Score=343.72 Aligned_cols=265 Identities=26% Similarity=0.430 Sum_probs=199.5
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeee
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCM 363 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 363 (621)
.++.+..++|.+.+.||+|+||.||+|... ++..||+|.++.... ......+.+|+.+++.++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344556788999999999999999999753 345899999975543 334557899999999999999999999998
Q ss_pred cCCc-----eEEEEeccCCCchhhhhccCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC
Q 007020 364 TPTE-----RLLVYPYMANGSVASCLRERP--PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 436 (621)
Q Consensus 364 ~~~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 436 (621)
+... .++||||+++|+|.+++.... .....+++..++.++.|+++||+|||++ +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 7653 499999999999999985422 2234589999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecccCCCe-eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchH
Q 007020 437 FEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVML 514 (621)
Q Consensus 437 ~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~ 514 (621)
+.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.... ....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~ 258 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-----NHEM 258 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHH
Confidence 99999999999865433221 2233447889999999999999999999999999999999 889986322 1111
Q ss_pred HHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 515 LDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 515 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.+ ....... +. ........+.+++..||+.||++|||+.++++.|+.
T Consensus 259 ~~---~~~~~~~------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 259 YD---YLLHGHR------LK----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HH---HHHTTCC------CC----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---HHHcCCC------CC----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11 1111111 11 112233678999999999999999999999999976
No 160
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=345.72 Aligned_cols=254 Identities=17% Similarity=0.180 Sum_probs=203.5
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEE------cCCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc---CCceeeeeee
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGR------LADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV---HRNLLRLRGF 361 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 361 (621)
++...++|.+.+.||+|+||+||+|. ..+++.||||+++... ..++..|+.++..++ |+||++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 34456789999999999999999994 3468899999986532 446778888887776 9999999999
Q ss_pred eecCCceEEEEeccCCCchhhhhccCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC-----
Q 007020 362 CMTPTERLLVYPYMANGSVASCLRERPP-SQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE----- 435 (621)
Q Consensus 362 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~----- 435 (621)
+...+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.
T Consensus 136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~ 212 (365)
T 3e7e_A 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ 212 (365)
T ss_dssp EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence 9999999999999999999999975221 233489999999999999999999999 9999999999999998
Q ss_pred ------CCcEEEcccccceeccc-CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccC
Q 007020 436 ------EFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLAN 508 (621)
Q Consensus 436 ------~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~ 508 (621)
++.+||+|||+|+.+.. ..........||..|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 292 (365)
T 3e7e_A 213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE 292 (365)
T ss_dssp ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE
T ss_pred cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc
Confidence 89999999999987543 23344556679999999999999999999999999999999999999996332110
Q ss_pred CCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHhc
Q 007020 509 DDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDR-PKMSEVVRMLEG 574 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R-Pt~~~vl~~L~~ 574 (621)
...... +..... ...+.+++..|++.+|.+| |+++++.+.|++
T Consensus 293 ----------------~~~~~~----~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 293 ----------------CKPEGL----FRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp ----------------EEECSC----CTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred ----------------eeechh----ccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 001111 111111 2456778889999999998 577888777766
No 161
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.2e-41 Score=348.65 Aligned_cols=247 Identities=30% Similarity=0.433 Sum_probs=198.9
Q ss_pred cCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCc--hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTP--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
+.|...+.||+|+||+||+|.. .+|+.||||++...... .....+.+|+++++.++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4578889999999999999985 57899999999754322 23356889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+. |+|.+++.... .++++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 134 e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9998 58888876432 2389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccchhhhc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||.... ....+.......
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--------~~~~~~~~~~~~---- 269 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNE---- 269 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC----
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcC----
Confidence 2 2346999999999985 4678999999999999999999999995221 111222222111
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.+.... ......+.+++..||+.||++|||++++++.
T Consensus 270 --~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 270 --SPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --CCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --CCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111 1123568899999999999999999999864
No 162
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=333.82 Aligned_cols=249 Identities=26% Similarity=0.419 Sum_probs=182.2
Q ss_pred cCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
++|.+.+.||+|+||.||+|.. .+|+.||+|.+..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688899999999999999986 4789999999864321 122356889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++++|.+++.... .++++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 9999999999998642 2489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccC
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVD 532 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 532 (621)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .... ... +
T Consensus 165 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~----~~~---~ 228 (278)
T 3cok_A 165 PHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--------LNKV----VLA---D 228 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------C----CSS---C
T ss_pred CCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--------HHHH----hhc---c
Confidence 222 22335689999999999988899999999999999999999999964321110 0000 000 1
Q ss_pred ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 533 PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 533 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.... ......+.+++..|++.||++|||++++++
T Consensus 229 ~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 229 YEMP----SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCCc----cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1111 112357889999999999999999999975
No 163
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.8e-41 Score=338.67 Aligned_cols=253 Identities=23% Similarity=0.320 Sum_probs=200.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcCC-C-------cEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLAD-G-------SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 366 (621)
.++|...+.||+|+||+||+|.... + ..||+|++.... ......+.+|+.+++.++||||+++++++.+++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 4678889999999999999998642 3 479999986543 344567999999999999999999999999999
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc--------
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE-------- 438 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-------- 438 (621)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999987432 388899999999999999999999 9999999999999998887
Q ss_pred EEEcccccceecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHH
Q 007020 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDW 517 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 517 (621)
+||+|||++..... .....||..|+|||++.+ ..++.++||||||+++|||++|..|+.... . ....
T Consensus 160 ~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~---~~~~ 227 (289)
T 4fvq_A 160 IKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----D---SQRK 227 (289)
T ss_dssp EEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----C---HHHH
T ss_pred eeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----c---hHHH
Confidence 99999999865432 123458899999999987 678999999999999999999655442111 1 1111
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCCc
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLA 578 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~~ 578 (621)
......... .... ....+.+++..||+.||++|||++++++.|++..-.
T Consensus 228 ~~~~~~~~~--------~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 228 LQFYEDRHQ--------LPAP----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HHHHHTTCC--------CCCC----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred HHHhhccCC--------CCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 111111000 0011 124678999999999999999999999999986444
No 164
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=345.39 Aligned_cols=260 Identities=18% Similarity=0.224 Sum_probs=202.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcCC---------CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceee--------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLAD---------GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLR-------- 357 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 357 (621)
.++|.+.+.||+|+||+||+|.... ++.||+|++... ..+.+|+++++.++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 4678899999999999999998753 789999998754 25789999999999999998
Q ss_pred -------eeeeeec-CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 007020 358 -------LRGFCMT-PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAA 429 (621)
Q Consensus 358 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 429 (621)
+++++.. ....++||||+ +|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5666655 67889999999 999999998652 12489999999999999999999999 9999999999
Q ss_pred CeeeCCCC--cEEEcccccceecccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCc
Q 007020 430 NILLDEEF--EAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501 (621)
Q Consensus 430 Nill~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf 501 (621)
|||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 8999999999876432211 113346999999999999989999999999999999999999999
Q ss_pred ccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 502 DLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
..... ............. .....+.+.... .......+.+++..||+.||++||++++|++.|++
T Consensus 269 ~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 269 TNCLP---NTEDIMKQKQKFV--DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp GGGTT---CHHHHHHHHHHHH--HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ccCCc---CHHHHHHHHHhcc--CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 74321 1111222211111 111111111100 01113678999999999999999999999999987
No 165
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.7e-40 Score=328.81 Aligned_cols=250 Identities=20% Similarity=0.237 Sum_probs=202.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|.+.+.||+|+||+||+|... ++..||+|.+..... .....+.+|+++++.++||||+++++++.+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 467889999999999999999865 577999999876543 335578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---CCCCcEEEcccccceec
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~ 450 (621)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999987643 288999999999999999999999 99999999999999 78899999999999876
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
.... ......||+.|+|||.+.+. ++.++||||||+++|+|++|+.||..... .+........ ...
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~~-- 225 (277)
T 3f3z_A 160 KPGK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKIREG-TFT-- 225 (277)
T ss_dssp CTTS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHC-CCC--
T ss_pred cCcc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhC-CCC--
Confidence 5332 23345699999999998654 89999999999999999999999963211 1111111111 000
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+ ..........+.+++..|++.||++|||+.++++
T Consensus 226 -~~---~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 226 -FP---EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CC---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CC---chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0000122367889999999999999999999975
No 166
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=346.79 Aligned_cols=257 Identities=24% Similarity=0.298 Sum_probs=186.3
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CCceeeeeeeee------
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRNLLRLRGFCM------ 363 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~------ 363 (621)
+....+|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++.++. ||||+++++++.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 344568889999999999999999964 78999999985543 344557889999999996 999999999984
Q ss_pred --cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeeCCCCcE
Q 007020 364 --TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK--IIHRDVKAANILLDEEFEA 439 (621)
Q Consensus 364 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~ 439 (621)
.....++||||+. |+|.+++..... ..++++..++.++.||+.||+|||+. + |+||||||+|||++.++.+
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~ 177 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTI 177 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCE
Confidence 3345799999996 699998865221 22489999999999999999999999 7 9999999999999999999
Q ss_pred EEcccccceecccCCCee-----------eecccccccccchhhh---ccCCCCCcccchhHHHHHHHHHhCCCCccccc
Q 007020 440 VVGDFGLAKLMDYKDTHV-----------TTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGIMLLELITGQRAFDLAR 505 (621)
Q Consensus 440 kl~DfGla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~pf~~~~ 505 (621)
||+|||+++......... .....||+.|+|||++ .+..++.++||||||+++|+|++|+.||....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 257 (337)
T 3ll6_A 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257 (337)
T ss_dssp EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence 999999998765332211 1134589999999998 56678899999999999999999999996322
Q ss_pred ccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 506 LANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.. ..+.... . ... .......+.+++..||+.||++|||+.++++.|+..
T Consensus 258 ~~--------~~~~~~~-----~-~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 258 KL--------RIVNGKY-----S-IPP-------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ----------------C-----C-CCT-------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HH--------HhhcCcc-----c-CCc-------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11 1111100 0 000 011123577899999999999999999999999774
No 167
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.6e-40 Score=353.65 Aligned_cols=260 Identities=19% Similarity=0.230 Sum_probs=193.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecC------C
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------T 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 366 (621)
.++|++.+.||+|+||+||+|... +|+.||||++.... ......++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999864 68999999997543 233455788999999999999999999998655 3
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++ +|.+.+... +++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~~------l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTSC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 56999999987 466666432 88899999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH------
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKG------ 520 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~------ 520 (621)
|+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+...+..
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~----~~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI----DQWNKVIEQLGTPCP 284 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCH
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCCH
Confidence 9865432 2234467999999999999999999999999999999999999999632210 001010000
Q ss_pred ------------Hhhhcc-cc-----cccCccc---cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 521 ------------LLKEKK-LE-----MLVDPDL---QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 521 ------------~~~~~~-~~-----~~~d~~~---~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...... .. ....... ...........+.+++..|++.||++|||++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 00 0000000 00111222567899999999999999999999975
No 168
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.2e-41 Score=337.45 Aligned_cols=247 Identities=22% Similarity=0.348 Sum_probs=199.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|+..+.||+|+||+||+|... +++.||+|+++.... .....++.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999875 799999999976532 33456788999999988 899999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC---------------
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE--------------- 436 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~--------------- 436 (621)
|||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999986432223489999999999999999999999 99999999999999844
Q ss_pred ----CcEEEcccccceecccCCCeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCc
Q 007020 437 ----FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDD 511 (621)
Q Consensus 437 ----~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~ 511 (621)
..+||+|||.+....... ...||..|+|||++.+. .++.++||||||+++|+|++|.+|+....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998765432 23489999999999876 56689999999999999999998764211
Q ss_pred chHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 512 VMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+ .... .... +.... .....+.+++..||+.||++|||+.++++
T Consensus 236 ----~~-~~~~-~~~~-----~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 ----QW-HEIR-QGRL-----PRIPQ----VLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HH-HHHH-TTCC-----CCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HH-HHHH-cCCC-----CCCCc----ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11 1111 1111 11111 12367889999999999999999999965
No 169
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.5e-40 Score=345.09 Aligned_cols=200 Identities=25% Similarity=0.380 Sum_probs=177.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|...+.||+|+||+||+|.+. +++.||+|+++..........+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467889999999999999999875 6899999999876655666789999999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999998643 2889999999999999999999832 7999999999999999999999999999755322
Q ss_pred CCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccc
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDL 503 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~ 503 (621)
......||+.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22334699999999999999999999999999999999999999963
No 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.8e-40 Score=328.99 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=201.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-----hhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
.++|.+.+.||+|+||+||+|... +|+.||+|.++..... .....+.+|+.+++.++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357888999999999999999876 6899999998754322 1356789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC----cEEEccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 444 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Df 444 (621)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 99999999999999997643 389999999999999999999999 999999999999998877 8999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
|++....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ..+........
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~ 226 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--------KQETLTNISAV 226 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTT
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--------hHHHHHHhHhc
Confidence 9998754322 2234458999999999999999999999999999999999999996321 11111111110
Q ss_pred cccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 525 KKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 525 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ...++ .........+.+++..|++.||++||++.++++
T Consensus 227 ~---~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 227 N---YDFDE----EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C---CCCCH----HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c---cCCcc----hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 00011 111122367889999999999999999999986
No 171
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=340.25 Aligned_cols=265 Identities=25% Similarity=0.410 Sum_probs=207.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-----CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC--
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-----ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-- 366 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 366 (621)
..++|.+.+.||+|+||.||+|.+ .+++.||||++.... ......+.+|+++++.++||||+++++++...+
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 346788889999999999999983 368899999997643 445567999999999999999999999987654
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 78999999999999999987532 388999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCee--eecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccc------cCC-CcchHHHH
Q 007020 447 AKLMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL------AND-DDVMLLDW 517 (621)
Q Consensus 447 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~------~~~-~~~~~~~~ 517 (621)
+.......... .....++..|+|||.+.+..++.++||||||+++|||++|..||..... ... ........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 98765443322 1233477789999999988899999999999999999999999863210 000 00111111
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
+........ ........+..+.+++..||+.||++|||+.+|++.|+.
T Consensus 272 ~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 272 LIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111111110 001112234678999999999999999999999999986
No 172
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-40 Score=371.01 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=196.7
Q ss_pred ceeeeccCceEEEEEcC---CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEeccCC
Q 007020 302 NILGRGGFGKVYKGRLA---DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 377 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 377 (621)
+.||+|+||+||+|.+. .++.||||+++.... .....++.+|+++++.++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999642 467899999976532 3345679999999999999999999999864 568999999999
Q ss_pred CchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCCCe-
Q 007020 378 GSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH- 456 (621)
Q Consensus 378 gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~- 456 (621)
|+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999997643 389999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhcccccccCcc
Q 007020 457 -VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPD 534 (621)
Q Consensus 457 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 534 (621)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... . .+.......... ..
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~---~~~~~~i~~~~~------~~ 592 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----G---SEVTAMLEKGER------MG 592 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----H---HHHHHHHHTTCC------CC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----H---HHHHHHHHcCCC------CC
Confidence 2223347789999999999999999999999999999998 999995321 1 111121111111 11
Q ss_pred ccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 535 LQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 535 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
....++..+.+++..||+.||++||++++|++.|++
T Consensus 593 ----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 593 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 112234678999999999999999999999999986
No 173
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.3e-40 Score=352.07 Aligned_cols=254 Identities=23% Similarity=0.339 Sum_probs=192.1
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-------chhHHHHHHHHHHHHhccCCceeeeeeeeec
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-------PGGELQFQTEVEMISMAVHRNLLRLRGFCMT 364 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 364 (621)
...++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999864 689999999865321 1112248899999999999999999999754
Q ss_pred CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC---CcEEE
Q 007020 365 PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE---FEAVV 441 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl 441 (621)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 56899999999999999987643 389999999999999999999999 99999999999999754 45999
Q ss_pred cccccceecccCCCeeeecccccccccchhhhcc---CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007020 442 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 442 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 518 (621)
+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ...+.+.+
T Consensus 284 ~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~i 357 (419)
T 3i6u_A 284 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQI 357 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----SCCHHHHH
T ss_pred eecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----hHHHHHHH
Confidence 999999875432 23344569999999999853 5678899999999999999999999963221 11121211
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. .... ..+. ........+.+++..|++.||++|||++|+++
T Consensus 358 ~~----~~~~--~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 358 TS----GKYN--FIPE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HT----TCCC--CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hc----CCCC--CCch----hhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 11 1100 0011 11122467889999999999999999999976
No 174
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.4e-40 Score=332.01 Aligned_cols=249 Identities=24% Similarity=0.392 Sum_probs=204.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|...+.||+|+||+||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999975 58899999986543 233456789999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999987643 388999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.... ......||..|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+........ .
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~-~----- 231 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKN-E----- 231 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTT-C-----
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhhc-c-----
Confidence 3222 2334568999999999998889999999999999999999999996322 11111111111 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..... .....+.+++..|++.||++|||++++++
T Consensus 232 -~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 232 -YSIPK----HINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp -CCCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CCCcc----ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 01111 12257889999999999999999999976
No 175
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.4e-40 Score=331.22 Aligned_cols=247 Identities=23% Similarity=0.387 Sum_probs=203.1
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec--------
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT-------- 364 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 364 (621)
...+|+..+.||+|+||.||+|.+. +++.||+|.++... ..+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 4567889999999999999999975 79999999987543 246789999999999999999998754
Q ss_pred --------CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC
Q 007020 365 --------PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 436 (621)
Q Consensus 365 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 436 (621)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 345799999999999999997642 22488999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007020 437 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLD 516 (621)
Q Consensus 437 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~ 516 (621)
+.+||+|||++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|..||.... .
T Consensus 159 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------~ 226 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------K 226 (284)
T ss_dssp TEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----------H
T ss_pred CCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----------H
Confidence 999999999998765332 2233459999999999999999999999999999999999999884211 1
Q ss_pred HHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 517 WVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 517 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
+.... ... ..... ....+.+++..||+.||++|||+.++++.|+..
T Consensus 227 ~~~~~-~~~--------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 227 FFTDL-RDG--------IISDI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHHHH-HTT--------CCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHh-hcc--------ccccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111 111 11111 125678999999999999999999999999764
No 176
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.2e-40 Score=339.13 Aligned_cols=249 Identities=24% Similarity=0.392 Sum_probs=204.8
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|.+.+.||+|+||.||++... +++.||+|++.... .......+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888899999999999999875 58899999987543 234456789999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999987643 389999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.... ......||..|+|||++.+..++.++||||||+++|+|++|+.||.... ..+.........
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~------ 257 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKNE------ 257 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTC------
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHhcCC------
Confidence 3322 2334569999999999999889999999999999999999999996321 111111111110
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+.. .....+.+++..||+.||++|||++++++
T Consensus 258 -~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 258 -YSIPK----HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -CCCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CCCCc----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111 12256889999999999999999999986
No 177
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.6e-40 Score=342.12 Aligned_cols=263 Identities=21% Similarity=0.277 Sum_probs=192.5
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCch-hHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|.+.+.||+|+||+||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467899999999999999999854 78999999997554322 234578999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee-----CCCCcEEEccccc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL-----DEEFEAVVGDFGL 446 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-----~~~~~~kl~DfGl 446 (621)
|||+++ +|.+++..... +++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~~~----~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNPD----VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 99999987543 89999999999999999999999 99999999999999 4556699999999
Q ss_pred ceecccCCCeeeecccccccccchhhhccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++....... ......||..|+|||++.+.. ++.++|||||||++|||++|+.||..... ...+...+... ...
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~-~~~ 257 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE----IDQLFKIFEVL-GLP 257 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHH-CCC
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH----HHHHHHHHHHh-CCC
Confidence 987643322 233445899999999998754 79999999999999999999999963211 11111111110 000
Q ss_pred ccccc-----------cCccccCc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 KLEML-----------VDPDLQNN-----YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ~~~~~-----------~d~~~~~~-----~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..... ..+..... ........+.+++..|++.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 00000000 00112367889999999999999999999976
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-39 Score=335.31 Aligned_cols=261 Identities=21% Similarity=0.262 Sum_probs=204.7
Q ss_pred HHHHHHHhcCCCcC-ceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhcc-CCceeeeeeeee
Q 007020 288 LRELQVATDSFSNK-NILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAV-HRNLLRLRGFCM 363 (621)
Q Consensus 288 ~~~~~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 363 (621)
++..+...+.|.+. +.||+|+||+||+|... +++.||+|+++.... ......+.+|+.++..+. ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34455666778777 88999999999999865 689999999976443 334567899999999885 699999999999
Q ss_pred cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEE
Q 007020 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAV 440 (621)
Q Consensus 364 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~k 440 (621)
+....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 9999999999999999999986542 23489999999999999999999999 9999999999999998 78999
Q ss_pred EcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH
Q 007020 441 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKG 520 (621)
Q Consensus 441 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 520 (621)
|+|||+++...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... .+....
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~ 244 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--------QETYLN 244 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------hHHHHH
Confidence 99999998764322 23345699999999999999999999999999999999999999953211 111111
Q ss_pred HhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 521 LLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 521 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..... . .............+.+++..|++.||++|||++++++
T Consensus 245 i~~~~-~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 245 ISQVN-V------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHTC-C------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHhcc-c------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 11110 0 0011111223367889999999999999999999975
No 179
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-40 Score=338.29 Aligned_cols=265 Identities=26% Similarity=0.373 Sum_probs=186.3
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceE
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 369 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 369 (621)
+.+..++|.+.+.||+|+||.||+|... +++.||||.+...........+.+|+.+++.++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 4566789999999999999999999864 689999999876544444567889999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhccC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccc
Q 007020 370 LVYPYMANGSVASCLRER----PPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 445 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 445 (621)
+||||+++|+|.+++... ......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 999999999999998741 11233489999999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCC----eeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH
Q 007020 446 LAKLMDYKDT----HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKG 520 (621)
Q Consensus 446 la~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 520 (621)
++........ .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .. ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~---~~~ 238 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-----KV---LML 238 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-----GH---HHH
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-----hH---HHH
Confidence 9876543211 12234468999999999876 56899999999999999999999999632211 01 111
Q ss_pred Hhhhcc--c-ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 521 LLKEKK--L-EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 521 ~~~~~~--~-~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...... . ....++.... .....+.+++..||+.||++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 239 TLQNDPPSLETGVQDKEMLK----KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHTSSCCCTTC-----CCCC----CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCCCccccccccchhhh----hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111100 0 0011111111 12357889999999999999999999975
No 180
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.1e-41 Score=336.65 Aligned_cols=250 Identities=28% Similarity=0.404 Sum_probs=196.8
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC-CceEEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-TERLLVY 372 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 372 (621)
..++|+..+.||+|+||+||+|... |+.||||+++... ....+.+|+.+++.++||||+++++++.+. +..++||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 4578889999999999999999884 8899999987543 345789999999999999999999987654 5789999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999976421 1267889999999999999999999 999999999999999999999999999975443
Q ss_pred CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... . +........ .
T Consensus 170 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~---~~~~~~~~~------~ 231 (278)
T 1byg_A 170 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----K---DVVPRVEKG------Y 231 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----G---GHHHHHTTT------C
T ss_pred c----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----H---HHHHHHhcC------C
Confidence 2 122347889999999999999999999999999999998 9999963211 1 111111111 0
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 574 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~ 574 (621)
.... .......+.+++..||+.||++||++.++++.|++
T Consensus 232 ~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 232 KMDA----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCC----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 1111 12233678899999999999999999999999987
No 181
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=340.74 Aligned_cols=254 Identities=23% Similarity=0.319 Sum_probs=193.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCC------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 366 (621)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467888999999999999999864 799999999865432 334557889999999999999999999987653
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 78999998763 288999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||..... .+.+..+....
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~l~~i~~~~ 242 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--------LDQLKEIMKVT 242 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHH
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhc
Confidence 9875432 234568999999999987 6789999999999999999999999963221 11111111000
Q ss_pred --c-------------------cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 --K-------------------LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 --~-------------------~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. +.......+ ..........+.+++..|++.||++|||++++++
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 243 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCHHHHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 000000000 0111122467889999999999999999999987
No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.4e-40 Score=341.09 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=199.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|+..+.||+|+||.||+|... +|+.||||++...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357888899999999999999875 5899999998655433 33456889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999998876543 289999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH-----------
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKG----------- 520 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~----------- 520 (621)
.. .......||..|+|||++.+. .++.++||||||+++|+|++|+.||...... ......+..
T Consensus 177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI----DQLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHH
T ss_pred Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhhhH
Confidence 22 223345689999999999875 6899999999999999999999999632211 111111100
Q ss_pred HhhhcccccccCccccCc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 521 LLKEKKLEMLVDPDLQNN-----YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 521 ~~~~~~~~~~~d~~~~~~-----~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
............+..... ........+.+++..||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000011111111110 01123467899999999999999999999975
No 183
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-39 Score=328.79 Aligned_cols=248 Identities=24% Similarity=0.371 Sum_probs=197.5
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeec----CCceE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTERL 369 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 369 (621)
..|.+.+.||+|+||+||+|... ++..||+|.+.... .......+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677788999999999999864 68899999987554 33445678999999999999999999998865 35679
Q ss_pred EEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeeC-CCCcEEEccccc
Q 007020 370 LVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPK--IIHRDVKAANILLD-EEFEAVVGDFGL 446 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~DfGl 446 (621)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999998643 388999999999999999999999 7 99999999999998 789999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
+...... ......||+.|+|||++. +.++.++||||||+++|+|++|+.||.... ..............
T Consensus 179 ~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHHTTTCC
T ss_pred ccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-------cHHHHHHHHhccCC
Confidence 9754322 233456999999999886 458999999999999999999999995321 11122222211111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ... .......+.+++..||+.||++|||++++++
T Consensus 248 ~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 248 P-----ASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp C-----GGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c-----ccc----CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 011 1112256889999999999999999999976
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-40 Score=339.74 Aligned_cols=265 Identities=25% Similarity=0.296 Sum_probs=196.1
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCch----hHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPG----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
..++|...+.||+|+||.||+|... +|+.||||.++...... ....+.+|+.+++.++||||+++++++.+....
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3578999999999999999999975 68999999997543221 123578999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 8888887643 2478889999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 449 LMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 449 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|.+||..... ...+....... .....
T Consensus 161 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~----~~~~~~i~~~~-~~~~~ 234 (346)
T 1ua2_A 161 SFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD----LDQLTRIFETL-GTPTE 234 (346)
T ss_dssp TTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHH-CCCCT
T ss_pred eccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHHHc-CCCCh
Confidence 764332 223345689999999999764 478999999999999999999999853211 01111111110 00000
Q ss_pred cccc------C----ccccC----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 528 EMLV------D----PDLQN----NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 528 ~~~~------d----~~~~~----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.... + ..... .........+.+++..|++.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 0 00000 0011223678999999999999999999999764
No 185
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.3e-39 Score=338.08 Aligned_cols=256 Identities=21% Similarity=0.344 Sum_probs=204.4
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc-------hhHHHHHHHHHHHHhc-cCCceeeeeee
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP-------GGELQFQTEVEMISMA-VHRNLLRLRGF 361 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l-~h~niv~l~~~ 361 (621)
.....++|...+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.+++.+ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445678999999999999999999975 7999999998754321 1134578899999998 79999999999
Q ss_pred eecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEE
Q 007020 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVV 441 (621)
Q Consensus 362 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 441 (621)
+......++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999997643 389999999999999999999999 9999999999999999999999
Q ss_pred cccccceecccCCCeeeecccccccccchhhhccC------CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHH
Q 007020 442 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515 (621)
Q Consensus 442 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~ 515 (621)
+|||++....... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.... . .
T Consensus 242 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~---~ 311 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----Q---I 311 (365)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----H---H
T ss_pred EecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----H---H
Confidence 9999998765332 23445699999999998643 57889999999999999999999995321 1 1
Q ss_pred HHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 516 DWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 516 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
......... ... ...+. .......+.+++..|++.||++|||+.++++
T Consensus 312 ~~~~~i~~~-~~~-~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 LMLRMIMEG-QYQ-FSSPE-----WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHHT-CCC-CCHHH-----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhC-CCC-CCCcc-----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 000 00000 0112356889999999999999999999986
No 186
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.2e-41 Score=353.15 Aligned_cols=244 Identities=13% Similarity=0.125 Sum_probs=189.7
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccC--CchhHHHHHHHHH---HHHhccCCceeeee-------ee
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEER--TPGGELQFQTEVE---MISMAVHRNLLRLR-------GF 361 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 361 (621)
.++|.+.+.||+|+||+||+|.+ .+|+.||||+++... .......+.+|+. .++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999996 469999999997542 2334567899994 55566899999998 55
Q ss_pred eecCC-----------------ceEEEEeccCCCchhhhhccCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 007020 362 CMTPT-----------------ERLLVYPYMANGSVASCLRERPP---SQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421 (621)
Q Consensus 362 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 421 (621)
+.+++ ..++||||+ +|+|.+++..... ....+++..+..|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 5799999986321 111234578889999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccC-----------CCCCcccchhHHHH
Q 007020 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-----------KSSEKTDVFGYGIM 490 (621)
Q Consensus 422 vH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGvi 490 (621)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 3345567 999999999887 78999999999999
Q ss_pred HHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 491 LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 491 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+|||++|+.||........ ...+... .. .....+.+++..||+.||++|||+.++++
T Consensus 303 l~elltg~~Pf~~~~~~~~-----------------~~~~~~~--~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG-----------------SEWIFRS--CK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC-----------------SGGGGSS--CC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc-----------------hhhhhhh--cc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999963221110 0111110 01 12367889999999999999999999976
No 187
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.8e-39 Score=346.70 Aligned_cols=200 Identities=23% Similarity=0.317 Sum_probs=167.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecC-----Cc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 367 (621)
.++|.+.+.||+|+||+||+|... +++.||||+++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999865 688999999975432 33445789999999999999999999998766 57
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 49999997643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCC---------------------eeeecccccccccchhhh-ccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007020 448 KLMDYKDT---------------------HVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGIMLLELITGQRAFD 502 (621)
Q Consensus 448 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~pf~ 502 (621)
+....... .......||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87653321 123456799999999986 55668999999999999999999766653
No 188
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.3e-39 Score=330.56 Aligned_cols=264 Identities=22% Similarity=0.325 Sum_probs=198.8
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
++|+..+.||+|+||+||+|... +|+.||||.++.... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888899999999999999875 789999999865432 2234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccC
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 453 (621)
|++ |+|.+++...... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 5999998865322 378899999999999999999999 9999999999999999999999999999865432
Q ss_pred CCeeeecccccccccchhhhccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc-----c
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK-----L 527 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 527 (621)
. .......||..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ........+....... .
T Consensus 157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 V-RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp S-BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHHHCCCCTTTSTTG
T ss_pred c-cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHHHhCCCchhhhhHh
Confidence 2 1223345899999999998765 78999999999999999999999963221 0111111111000000 0
Q ss_pred cc--ccCcccc----Cc---ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 528 EM--LVDPDLQ----NN---YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 528 ~~--~~d~~~~----~~---~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ...+... .. ........+.+++..|++.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00 0000000 00 00112367889999999999999999999976
No 189
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.9e-40 Score=341.04 Aligned_cols=262 Identities=20% Similarity=0.305 Sum_probs=201.4
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC-----Cce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 368 (621)
.++|+..+.||+|+||.||+|... +++.||||++...........+.+|++++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999865 68899999997655555556789999999999999999999998655 367
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+.+ +|.+++.... +++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 106 ~iv~e~~~~-~L~~~l~~~~-----~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQH-----LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCSE-EHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccCc-CHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 999999985 9999987642 88999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCee--eecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 449 LMDYKDTHV--TTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 449 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
......... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ......+.......
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~ 251 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY-----LDQLNHILGILGSP 251 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG-----GGHHHHHHHHHCSC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHHHhCCC
Confidence 765332211 234569999999998754 4589999999999999999999999963221 11111111111000
Q ss_pred ccc---------------cccCcccc--CcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 KLE---------------MLVDPDLQ--NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ~~~---------------~~~d~~~~--~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
... ....+... ..........+.+++..|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00000000 0001112357889999999999999999999975
No 190
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.5e-39 Score=334.84 Aligned_cols=256 Identities=20% Similarity=0.242 Sum_probs=198.2
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CCceeeeeeeeec--CCceEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRNLLRLRGFCMT--PTERLL 370 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 370 (621)
.++|++.+.||+|+||+||+|.. .+++.||||+++.. ....+.+|+.+++.++ ||||+++++++.+ ....++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 36788899999999999999985 47899999998643 2457889999999997 9999999999987 567899
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC-cEEEccccccee
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKL 449 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~ 449 (621)
||||+++++|.+++.. +++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 9999999999999864 78889999999999999999999 999999999999999776 899999999987
Q ss_pred cccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 528 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
...... .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+..... ........
T Consensus 181 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~---~~~l~~~~~-~~~~~~~~ 254 (330)
T 3nsz_A 181 YHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN---YDQLVRIAK-VLGTEDLY 254 (330)
T ss_dssp CCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH---HHHHHHHHH-HHCHHHHH
T ss_pred cCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch---HHHHHHHHH-hcCCchhh
Confidence 653322 334468999999999977 66899999999999999999999999522110 001111111 00000000
Q ss_pred cc-------cCc----------------cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 529 ML-------VDP----------------DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 529 ~~-------~d~----------------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. .++ .............+.+++..|++.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000 0000111113467899999999999999999999976
No 191
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.5e-40 Score=341.33 Aligned_cols=270 Identities=19% Similarity=0.259 Sum_probs=198.8
Q ss_pred CHHHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCch----------hHHHHHHHHHHHHhccCCcee
Q 007020 287 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG----------GELQFQTEVEMISMAVHRNLL 356 (621)
Q Consensus 287 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv 356 (621)
...++....++|.+.+.||+|+||.||+|...+|+.||||++....... ....+.+|+.+++.++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567888899999999999999999999998889999999986543221 135789999999999999999
Q ss_pred eeeeeeec-----CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 007020 357 RLRGFCMT-----PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 431 (621)
Q Consensus 357 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 431 (621)
++++++.. ....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999843 346799999998 58888887542 2489999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCC
Q 007020 432 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDD 510 (621)
Q Consensus 432 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~ 510 (621)
+++.++.+||+|||++...... .......||..|+|||++.+ ..++.++|||||||++|+|++|+.||......
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--- 240 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--- 240 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---
T ss_pred EEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH---
Confidence 9999999999999999754322 22334568999999999877 67899999999999999999999999632210
Q ss_pred cchHHHHHHHHhhhcccc-----------ccc-------CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 511 DVMLLDWVKGLLKEKKLE-----------MLV-------DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~-----------~~~-------d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.....+.......... ... ...............+.+++..|++.||++|||+.|+++
T Consensus 241 --~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 241 --NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp --HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0111111100000000 000 000000011122356889999999999999999999975
No 192
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-39 Score=328.13 Aligned_cols=247 Identities=24% Similarity=0.356 Sum_probs=203.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367888999999999999999875 578999999864321 12245688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999998643 388999999999999999999999 99999999999999999999999999997654
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|..||.... ...........
T Consensus 166 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~------- 227 (284)
T 2vgo_A 166 SL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--------HTETHRRIVNV------- 227 (284)
T ss_dssp SS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTT-------
T ss_pred cc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC--------HhHHHHHHhcc-------
Confidence 32 2234568999999999999899999999999999999999999996321 11111111111
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+.... ......+.+++..|++.||++||+++++++
T Consensus 228 ~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 228 DLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCC----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 11111 112357889999999999999999999976
No 193
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.9e-41 Score=337.60 Aligned_cols=258 Identities=30% Similarity=0.400 Sum_probs=197.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC--CCc--EEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA--DGS--LVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 368 (621)
.++|++.+.||+|+||+||+|.+. +++ .||||+++... .......+.+|+.+++.++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467888999999999999999853 333 68999987543 2344567899999999999999999999988764 8
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 99999999999999997642 2388999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCee--eecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 449 LMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 449 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
......... .....++..|+|||++.+..++.++||||||+++|+|++ |+.||.... ..+.+.......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~ 241 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GSQILHKIDKEG 241 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTSC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--------HHHHHHHHHccC
Confidence 765433322 223457889999999998888999999999999999999 999996321 112222222111
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 576 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~ 576 (621)
... . .....+..+.+++..||+.||++|||+.++++.|++..
T Consensus 242 ~~~-----~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 242 ERL-----P----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp CCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCC-----C----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 100 0 11123367899999999999999999999999998743
No 194
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.4e-41 Score=338.01 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=187.8
Q ss_pred HhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHH-HHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|+..+.||+|+||+||+|.. .+|+.||+|+++.........+ +..+...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 457888999999999999999986 4789999999976654444333 44445557888999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++ +|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999985 888877653223345899999999999999999999853 89999999999999999999999999998654
Q ss_pred cCCCeeeecccccccccchhhh----ccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYL----STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
... ......||+.|+|||++ .+..++.++||||||+++|+|++|+.||.... ... ..+........
T Consensus 162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~-~~~~~~~~~~~- 231 (290)
T 3fme_A 162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------TPF-QQLKQVVEEPS- 231 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS------CHH-HHHHHHHHSCC-
T ss_pred ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC------chH-HHHHHHhccCC-
Confidence 322 22334599999999996 45678899999999999999999999996211 111 11111111111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+... .......+.+++..|++.||++|||+.++++
T Consensus 232 -----~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 -----PQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----CCcc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111 1112367889999999999999999999976
No 195
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.6e-40 Score=368.55 Aligned_cols=262 Identities=22% Similarity=0.344 Sum_probs=208.3
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcC----CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLA----DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT 364 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 364 (621)
.++++..++|.+.+.||+|+||+||+|.+. .+..||+|.++..........+.+|+.+++.++||||+++++++.
T Consensus 383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~- 461 (656)
T 2j0j_A 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 461 (656)
T ss_dssp GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence 344455678899999999999999999864 256799999876655555678999999999999999999999985
Q ss_pred CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccc
Q 007020 365 PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 444 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 444 (621)
++..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DF 535 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 535 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEec
Confidence 467899999999999999998643 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLK 523 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
|+++..............+|+.|+|||++.+..++.++||||||+++|||++ |..||.... ..+.+.....
T Consensus 536 G~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--------~~~~~~~i~~ 607 (656)
T 2j0j_A 536 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------NNDVIGRIEN 607 (656)
T ss_dssp CCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHH
T ss_pred CCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHc
Confidence 9998765443333334457889999999999999999999999999999997 999996321 1122222211
Q ss_pred hcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007020 524 EKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 575 (621)
Q Consensus 524 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~ 575 (621)
.... . .+...+..+.+++..||+.||++|||+.+|++.|+..
T Consensus 608 ~~~~------~----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 608 GERL------P----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp TCCC------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC------C----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111 0 1122336788999999999999999999999999873
No 196
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-39 Score=350.57 Aligned_cols=195 Identities=23% Similarity=0.346 Sum_probs=154.5
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeec-----CCc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMT-----PTE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 367 (621)
.++|.+.+.||+|+||+||+|.+. +++.||||++..... ......+.+|+.+++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999865 789999999865432 3345578999999999999999999999843 356
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 69999987643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCC--------------------------eeeecccccccccchhhh-ccCCCCCcccchhHHHHHHHHHhC
Q 007020 448 KLMDYKDT--------------------------HVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGIMLLELITG 497 (621)
Q Consensus 448 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg 497 (621)
+....... .......||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87643211 123345689999999986 456689999999999999999993
No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-39 Score=353.26 Aligned_cols=252 Identities=24% Similarity=0.308 Sum_probs=201.8
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|.+.+.||+|+||+||+|... +++.||||++.... .......+.+|+++++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999875 78999999986432 1233567899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC---CCCcEEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGla~~ 449 (621)
||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999887643 389999999999999999999999 999999999999995 456799999999986
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ..+.+..........
T Consensus 174 ~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~- 241 (486)
T 3mwu_A 174 FQQN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGKYAF- 241 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCS-
T ss_pred CCCC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCC-
Confidence 5432 22344569999999999875 58999999999999999999999995321 112222222111100
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
+ .......+..+.+++..||+.||++|||+.++++.
T Consensus 242 --~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 --D----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --C----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --C----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 01112234678899999999999999999999874
No 198
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.1e-39 Score=346.52 Aligned_cols=262 Identities=19% Similarity=0.243 Sum_probs=205.1
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccC-CceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVH-RNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|.+.+.||+|+||.||+|.+ .+++.||||++..... ..++..|+++++.+.| ++|..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 46899999999999999999986 4789999998865432 2357899999999986 56666667777888899999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---CCCCcEEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~ 449 (621)
||+ +++|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 83 e~~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ECC-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999 8899999985432 389999999999999999999999 99999999999999 5889999999999987
Q ss_pred cccCCCe------eeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007020 450 MDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 523 (621)
Q Consensus 450 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
+...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~~ 230 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISE 230 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-----SHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch-----hHHHHHHHHhh
Confidence 6543322 122556999999999999999999999999999999999999999632211 11111111111
Q ss_pred hcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 524 EKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 524 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
.. ...... .+ ......++.+++..||+.+|++||++.+|++.|++...
T Consensus 231 ~~-~~~~~~-~l----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 231 KK-VATSIE-AL----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HH-HHSCHH-HH----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cc-ccccHH-HH----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 10 000000 00 11123678999999999999999999999999988633
No 199
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.3e-39 Score=352.99 Aligned_cols=251 Identities=25% Similarity=0.305 Sum_probs=200.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc------------hhHHHHHHHHHHHHhccCCceeeeeee
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP------------GGELQFQTEVEMISMAVHRNLLRLRGF 361 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 361 (621)
.++|.+.+.||+|+||+||+|... +++.||+|+++..... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 578999999999999999999865 6889999999754322 234568899999999999999999999
Q ss_pred eecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC---c
Q 007020 362 CMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF---E 438 (621)
Q Consensus 362 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~ 438 (621)
+.+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999987643 389999999999999999999999 999999999999998776 6
Q ss_pred EEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007020 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 518 (621)
+||+|||++...... .......||+.|+|||++. ..++.++||||+||++|+|++|..||.... ..+.+
T Consensus 188 ~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~ 256 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN--------DQDII 256 (504)
T ss_dssp EEECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHH
T ss_pred EEEEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHH
Confidence 999999999876533 2234456999999999986 468999999999999999999999996321 11222
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
........ . .+. ......+..+.+++..|++.||.+|||++|+++
T Consensus 257 ~~i~~~~~-~--~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 257 KKVEKGKY-Y--FDF----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHCCC-C--CCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCC-C--CCc----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 22221110 0 000 001122367889999999999999999999985
No 200
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1e-39 Score=354.23 Aligned_cols=252 Identities=25% Similarity=0.339 Sum_probs=204.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
..++|...+.||+|+||+||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467889999999999999999875 789999999965432 2345678999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---CCCCcEEEcccccc
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLA 447 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla 447 (621)
||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 999999999999997643 389999999999999999999999 99999999999999 56789999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
....... ......||+.|+|||++.+ .++.++||||+||++|+|++|..||.... ..+.+....... .
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~-~ 244 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--------EYDILKKVEKGK-Y 244 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-C
Confidence 8654332 2334569999999999876 68999999999999999999999996321 111222221111 1
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. . ........+..+.+++..|++.||++|||+.++++
T Consensus 245 ~-~-----~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 245 T-F-----ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp C-C-----CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C-C-----CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0 0 00111223467889999999999999999999985
No 201
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.3e-39 Score=352.08 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=198.1
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|...+.||+|+||+||+|... ++..||+|+++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457888999999999999999975 688999999976542 233557899999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEEEccccccee
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKL 449 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla~~ 449 (621)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||++..
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999887643 388999999999999999999999 9999999999999976 45599999999987
Q ss_pred cccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 450 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 450 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.... .......||+.|+|||++. ..++.++||||+||++|+|++|..||.... ..+.......... .
T Consensus 189 ~~~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~--~ 255 (494)
T 3lij_A 189 FENQ--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT--------DQEILRKVEKGKY--T 255 (494)
T ss_dssp CBTT--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCC--C
T ss_pred CCCC--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC--C
Confidence 6532 2234456999999999986 568999999999999999999999996321 1122222221111 0
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
...+. ....+..+.+++..||+.||.+|||+.++++
T Consensus 256 ~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 256 FDSPE-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CCSGG-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchh-----cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 01111 1123367889999999999999999999875
No 202
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-40 Score=343.82 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=200.4
Q ss_pred HHhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHH-HHhccCCceeeeeeeeecCCceEE
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEM-ISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
+..++|+..+.||+|+||+||+|.. .+|+.||||+++.........++..|..+ ++.++||||+++++++..++..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3456788889999999999999986 47899999999876555555566666665 778899999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++ +|.+++.........+++..+..++.||+.||+|||++. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999986 998888753222335899999999999999999999742 8999999999999999999999999999865
Q ss_pred ccCCCeeeecccccccccchhhhcc----CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||.... ... ..+........
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~------~~~-~~~~~~~~~~~ 275 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------TPF-QQLKQVVEEPS 275 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS------CHH-HHHHHHHHSCC
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc------chH-HHHHHHhcCCC
Confidence 421 12223469999999999743 468899999999999999999999996321 111 11222211111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+... .......+.+++..||+.||++||++.++++
T Consensus 276 ------~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 ------PQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ------CCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------CCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111 1112367899999999999999999999976
No 203
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=330.56 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=198.1
Q ss_pred cCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEec
Q 007020 296 DSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 374 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 374 (621)
++|....+||+|+||.||+|.. .+++.||||.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 3455566899999999999986 468899999987543 33456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC-CCcEEEcccccceecccC
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKLMDYK 453 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~ 453 (621)
+++++|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 101 VPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred CCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999986532 33467889999999999999999999 9999999999999987 899999999999875432
Q ss_pred CCeeeecccccccccchhhhccCC--CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 454 DTHVTTAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 454 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
. .......|+..|+|||++.+.. ++.++||||||+++|+|++|+.||..... . .......... ..
T Consensus 177 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~-~~~~~~~~~~------~~ 243 (295)
T 2clq_A 177 N-PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-----P-QAAMFKVGMF------KV 243 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS-----H-HHHHHHHHHH------CC
T ss_pred C-CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc-----h-hHHHHhhccc------cc
Confidence 2 1223456899999999997654 78999999999999999999999963211 0 0011110000 01
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+... ......+.+++..||+.||++||++.++++
T Consensus 244 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEIP----ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCC----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111 122367889999999999999999999975
No 204
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.5e-39 Score=364.65 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=201.2
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCc
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 367 (621)
....++|++.+.||+|+||+||+|... +++.||||+++... .......+..|..++..+ +||||+++++++.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 345578999999999999999999865 68899999997532 122344678899998877 79999999999999999
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla 489 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 489 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred EEEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeeccee
Confidence 999999999999999998653 289999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 490 ~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~-- 558 (674)
T 3pfq_A 490 KENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN-- 558 (674)
T ss_dssp EECCCT-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHSSC--
T ss_pred eccccC-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCC--
Confidence 864322 223455679999999999999999999999999999999999999996321 112222222211
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKM 565 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 565 (621)
.. ++.....++.+++..||+.||++||++
T Consensus 559 -----~~----~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 -----VA----YPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -----CC----CCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -----CC----CCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 01 111233678899999999999999997
No 205
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-40 Score=348.06 Aligned_cols=255 Identities=11% Similarity=0.019 Sum_probs=181.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCc--hhHHHHHHHHHHHHhc--cCCceeeee-------eee
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTP--GGELQFQTEVEMISMA--VHRNLLRLR-------GFC 362 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 362 (621)
...|...+.||+|+||+||+|.+. +|+.||||+++..... .....+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888899999999999999965 7899999999875532 2344677886555544 699988755 333
Q ss_pred ecC-----------------CceEEEEeccCCCchhhhhccCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCC
Q 007020 363 MTP-----------------TERLLVYPYMANGSVASCLRERPPSQLPLDWPTR------KRIALGSARGLSYLHDHCDP 419 (621)
Q Consensus 363 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~------~~i~~~i~~~L~~LH~~~~~ 419 (621)
..+ ...++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 322 33799999999 899999986421 1344555 68889999999999999
Q ss_pred CeEecCCCCCCeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhcc--CCCCCcccchhHHHHHHHHHhC
Q 007020 420 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGIMLLELITG 497 (621)
Q Consensus 420 ~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg 497 (621)
+|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986542 2224457799999999987 6789999999999999999999
Q ss_pred CCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 498 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 498 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+.||........... ........................+.+++..||+.||++|||+.++++
T Consensus 290 ~~Pf~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGSW----------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTCC----------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccch----------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999974422111000 000000000111111111123467899999999999999999999965
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-39 Score=330.78 Aligned_cols=253 Identities=22% Similarity=0.329 Sum_probs=197.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
..+.|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 3567889999999999999999975 58999999986543 334567889999999999999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp ECCTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999875322 389999999999999999999999 999999999999999999999999998764321
Q ss_pred CCCeeeecccccccccchhhhc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
. ........||..|+|||++. +..++.++||||||+++|+|++|+.||.... ..............
T Consensus 170 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~ 240 (302)
T 2j7t_A 170 T-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSDPP 240 (302)
T ss_dssp H-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCCC
T ss_pred c-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC--------HHHHHHHHhccCCc
Confidence 1 11122345899999999984 5678899999999999999999999996321 11112222111111
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.... .......+.+++..||+.||++|||+.++++
T Consensus 241 -~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 241 -TLLT-------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -CCSS-------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -ccCC-------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0111 1122357889999999999999999999975
No 207
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.4e-40 Score=345.40 Aligned_cols=265 Identities=20% Similarity=0.231 Sum_probs=194.6
Q ss_pred HHHHhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC----
Q 007020 291 LQVATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP---- 365 (621)
Q Consensus 291 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 365 (621)
++...++|...+.||+|+||+||+|.. .+|+.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 345678899999999999999999986 4789999999865432 234799999999999999999998443
Q ss_pred ----------------------------------CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 007020 366 ----------------------------------TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS 411 (621)
Q Consensus 366 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~ 411 (621)
...++||||+++ +|.+.+.........+++..+..++.||++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 347899999985 888777643223345899999999999999999
Q ss_pred HHHhCCCCCeEecCCCCCCeeeC-CCCcEEEcccccceecccCCCeeeecccccccccchhhhccCC-CCCcccchhHHH
Q 007020 412 YLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGI 489 (621)
Q Consensus 412 ~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv 489 (621)
|||+. +|+||||||+|||++ .++.+||+|||+++...... ......||..|+|||++.+.. ++.++||||+||
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 99999 999999999999997 68899999999998764332 223446899999999988754 899999999999
Q ss_pred HHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh---------cccccccCccc-----cCcccHHHHHHHHHHHHhcc
Q 007020 490 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE---------KKLEMLVDPDL-----QNNYVEAEVEQLIQVALLCT 555 (621)
Q Consensus 490 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~~~-----~~~~~~~~~~~l~~l~~~c~ 555 (621)
++|||++|+.||..... ...+...++..... .......-+.. ...........+.+++..||
T Consensus 231 il~ell~g~~pf~~~~~----~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 231 VFGELILGKPLFSGETS----IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 99999999999963211 11111111100000 00000000110 00011123467899999999
Q ss_pred CCCCCCCCCHHHHHH
Q 007020 556 QGSPMDRPKMSEVVR 570 (621)
Q Consensus 556 ~~~P~~RPt~~~vl~ 570 (621)
+.||++|||+.|+++
T Consensus 307 ~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 307 RYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSGGGSCCHHHHHT
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999975
No 208
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-39 Score=330.52 Aligned_cols=255 Identities=21% Similarity=0.353 Sum_probs=203.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 373 (621)
.++|...+.||+|+||+||+|+.. +|+.||+|.++.... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 467888999999999999999865 789999999975432 234468899999999999999999999999999999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---CCCCcEEEcccccceec
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~ 450 (621)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999987643 388999999999999999999999 99999999999999 78889999999999754
Q ss_pred ccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEML 530 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (621)
... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ..+......... . .
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~-~-~- 225 (304)
T 2jam_A 160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--------ESKLFEKIKEGY-Y-E- 225 (304)
T ss_dssp CCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHCC-C-C-
T ss_pred CCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-C-C-
Confidence 322 2233458999999999999899999999999999999999999996321 111122211111 0 0
Q ss_pred cCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHhcC
Q 007020 531 VDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR--MLEGD 575 (621)
Q Consensus 531 ~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~--~L~~~ 575 (621)
... .........+.+++..|++.||++|||++++++ .+++.
T Consensus 226 ~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 226 FES----PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp CCT----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred CCc----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 001 111122367889999999999999999999986 34443
No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=329.17 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=198.6
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
...++|+..+.||+|+||.||+|... +|+.||+|.+.... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 34578999999999999999999875 58999999997543 245688999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EECCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred eecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999987422 2389999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... .......... ......
T Consensus 177 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~~~~~ 246 (314)
T 3com_A 177 DTM-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--------MRAIFMIPTN-PPPTFR 246 (314)
T ss_dssp TTB-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHS-CCCCCS
T ss_pred hhc-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhcC-CCcccC
Confidence 322 223345689999999999998899999999999999999999999963211 1111111111 100111
Q ss_pred CccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 532 DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 532 d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. .......+.+++..||+.||++|||+.++++
T Consensus 247 ~-------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 247 K-------PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp S-------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C-------cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1 1112367889999999999999999999976
No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.5e-39 Score=333.75 Aligned_cols=253 Identities=24% Similarity=0.346 Sum_probs=196.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-------chhHHHHHHHHHHHHhccCCceeeeeeeeecC
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-------PGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 365 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 365 (621)
..++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+|+++++.++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567999999999999999999865 688999999865421 12233588999999999999999999998765
Q ss_pred CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc---EEEc
Q 007020 366 TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE---AVVG 442 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~ 442 (621)
. .++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 4 899999999999999987543 389999999999999999999999 9999999999999987654 9999
Q ss_pred ccccceecccCCCeeeecccccccccchhhhc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007020 443 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 519 (621)
Q Consensus 443 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 519 (621)
|||++...... .......||..|+|||++. ...++.++||||||+++|+|++|..||..... ...+...+.
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~ 233 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQIT 233 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC----SSCHHHHHH
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----HHHHHHHHH
Confidence 99999875432 2223456899999999974 45678999999999999999999999963221 111222211
Q ss_pred HHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 520 GLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 520 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. .... ..+.. .......+.+++..|++.||++||++.++++
T Consensus 234 ~----~~~~--~~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 S----GKYN--FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp H----TCCC--CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h----Cccc--cCchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 1100 00111 1122367889999999999999999999875
No 211
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-39 Score=337.16 Aligned_cols=263 Identities=23% Similarity=0.319 Sum_probs=198.7
Q ss_pred cCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecC--------
Q 007020 296 DSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-------- 365 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 365 (621)
++|++.+.||+|+||+||+|.. .+|+.||||++..... ......+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788999999999999999987 4789999999865443 22345678999999999999999999998763
Q ss_pred CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccc
Q 007020 366 TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 445 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 445 (621)
+..++||||+++ +|.+.+..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 468999999986 77777765432 389999999999999999999999 99999999999999999999999999
Q ss_pred cceecccCC---Ceeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH
Q 007020 446 LAKLMDYKD---THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGL 521 (621)
Q Consensus 446 la~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 521 (621)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+...
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~ 244 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQL 244 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHH
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHH
Confidence 998764321 222344568999999999976 457999999999999999999999996321 11111111111
Q ss_pred hhhcccc---ccc-----C----ccccCcccHHH------HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 522 LKEKKLE---MLV-----D----PDLQNNYVEAE------VEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 522 ~~~~~~~---~~~-----d----~~~~~~~~~~~------~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
....... ... + .........+. ...+.+++..|++.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1100000 000 0 00000001111 245889999999999999999999976
No 212
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.5e-39 Score=341.90 Aligned_cols=266 Identities=21% Similarity=0.238 Sum_probs=200.7
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhcc--------CCceeeeeeeee-
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAV--------HRNLLRLRGFCM- 363 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~- 363 (621)
..++|.+.+.||+|+||+||+|+.. +++.||||+++.. ......+.+|+.+++.++ |+||+++++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 3578999999999999999999854 6889999998643 334557889999999886 788999999987
Q ss_pred ---cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCC---
Q 007020 364 ---TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF--- 437 (621)
Q Consensus 364 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~--- 437 (621)
.....++||||+. ++|.+.+..... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 113 SGVNGTHICMVFEVLG-HHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EETTEEEEEEEECCCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred cCCCCceEEEEEeccC-ccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 5568899999994 566666654322 23899999999999999999999964 799999999999999775
Q ss_pred ----------------------------------------------cEEEcccccceecccCCCeeeecccccccccchh
Q 007020 438 ----------------------------------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 471 (621)
Q Consensus 438 ----------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE 471 (621)
.+||+|||+++..... .....||..|+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE 263 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCCh
Confidence 7999999999876432 23346899999999
Q ss_pred hhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCC-cchHHHHHHHHhhhc--------c-cccccCc--------
Q 007020 472 YLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDD-DVMLLDWVKGLLKEK--------K-LEMLVDP-------- 533 (621)
Q Consensus 472 ~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~--------~-~~~~~d~-------- 533 (621)
++.+..++.++|||||||++|||++|+.||......... .......+....... . .......
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 999999999999999999999999999999643221111 011111111111000 0 0000000
Q ss_pred --cc---------cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 534 --DL---------QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 534 --~~---------~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ...........+.+++..||+.||++|||++|+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 01124556778999999999999999999999976
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.6e-39 Score=325.91 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=195.2
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC--CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER--TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
..++|.+.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467889999999999999999975 78999999986432 12234568899999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 999999999999997643 288999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEM 529 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.... ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||.... .......... ...
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~-- 228 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKIRG-GVF-- 228 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCC--
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHhhc-Ccc--
Confidence 4322 2234458999999999987765 689999999999999999999996321 1111111111 100
Q ss_pred ccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 530 LVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 530 ~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
..+ ......+.+++..|++.||++|||++++++
T Consensus 229 -~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 -YIP-------EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -CCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -cCc-------hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 011 112357889999999999999999999987
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.6e-39 Score=337.53 Aligned_cols=256 Identities=21% Similarity=0.260 Sum_probs=191.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCC------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 366 (621)
.++|...+.||+|+||+||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367889999999999999999864 688999999975432 334456889999999999999999999987654
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999985 78888763 278899999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh---
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK--- 523 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--- 523 (621)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+ .....
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~-~~i~~~~~ 243 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-------IDQW-NKVIEQLG 243 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHH-HHHHC-CC
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHH-HHHHHHhC
Confidence 9865432 223345699999999999999999999999999999999999999963221 0011 11100
Q ss_pred -------------------hcc------cccccCccc---cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 524 -------------------EKK------LEMLVDPDL---QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 524 -------------------~~~------~~~~~d~~~---~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
... ......... ...........+.+++..|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000 000000000 01112233577899999999999999999999986
No 215
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=343.38 Aligned_cols=264 Identities=25% Similarity=0.426 Sum_probs=203.3
Q ss_pred HHHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCC
Q 007020 288 LRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 366 (621)
Q Consensus 288 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 366 (621)
..++++..++|++.+.||+|+||.||+|.+.+ .||+|.++.... ......+.+|+.+++.++||||+++++++.+.+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 44556667889999999999999999998753 499999875432 223345788999999999999999999999999
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++||||+++++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ceEEEeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCC
Confidence 9999999999999999997643 2488899999999999999999999 999999999999998 67999999999
Q ss_pred ceecccCC----Ceeeecccccccccchhhhcc---------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcch
Q 007020 447 AKLMDYKD----THVTTAVRGTIGHIAPEYLST---------GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513 (621)
Q Consensus 447 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~ 513 (621)
+....... ........|+..|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------- 247 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-------- 247 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC--------
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 87653211 112233458999999999874 347889999999999999999999996321
Q ss_pred HHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 514 LLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
........... ..+.... ......+.+++..||+.||++|||+.++++.|+....
T Consensus 248 ~~~~~~~~~~~------~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 248 AEAIIWQMGTG------MKPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HHHHHHHHHTT------CCCCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred HHHHHHHhccC------CCCCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11111111111 1111110 0112468899999999999999999999999998543
No 216
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=340.09 Aligned_cols=262 Identities=25% Similarity=0.370 Sum_probs=199.4
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeec--
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMT-- 364 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-- 364 (621)
.++....++|++.+.||+|+||.||+|.+. +|+.||||++.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 334456788999999999999999999874 78999999986543 2345788999999998 79999999999876
Q ss_pred ----CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEE
Q 007020 365 ----PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV 440 (621)
Q Consensus 365 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 440 (621)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999998643 22488899999999999999999999 999999999999999999999
Q ss_pred EcccccceecccCCCeeeecccccccccchhhhc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHH
Q 007020 441 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515 (621)
Q Consensus 441 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~ 515 (621)
|+|||++....... .......|+..|+|||++. +..++.++||||||+++|+|++|+.||..... .
T Consensus 170 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~ 240 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--------M 240 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------H
T ss_pred EeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------H
Confidence 99999998654322 1223446899999999997 55688999999999999999999999952211 0
Q ss_pred HHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHhcC
Q 007020 516 DWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR--MLEGD 575 (621)
Q Consensus 516 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~--~L~~~ 575 (621)
........ ........ . .....+.+++..||+.||++||+++++++ .+++.
T Consensus 241 ~~~~~~~~-~~~~~~~~----~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 241 RALFLIPR-NPAPRLKS----K----KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp HHHHHHHH-SCCCCCSC----S----CSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred HHHHHhhc-CccccCCc----c----ccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 11111111 11111111 1 12357889999999999999999999987 34443
No 217
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.1e-39 Score=334.92 Aligned_cols=262 Identities=22% Similarity=0.310 Sum_probs=199.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC-----Cce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 368 (621)
.++|.+.+.||+|+||+||+|.+. +|+.||||.++..........+.+|+.+++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999865 68999999997655555566788999999999999999999987654 678
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999998 5999998763 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCe---------eeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007020 449 LMDYKDTH---------VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 449 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 518 (621)
........ ......||..|+|||++.+ ..++.++|||||||++|+|++|+.||...... .....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~ 235 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR-----HQLLLI 235 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHH
Confidence 76532211 1223468999999998765 67899999999999999999999999632210 000111
Q ss_pred HHHhhhcc----cccccC----------cccc----CcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 519 KGLLKEKK----LEMLVD----------PDLQ----NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 519 ~~~~~~~~----~~~~~d----------~~~~----~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
........ ...... +... ..........+.+++..||+.||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11000000 000000 0000 0001123467889999999999999999999976
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.7e-39 Score=344.70 Aligned_cols=197 Identities=21% Similarity=0.261 Sum_probs=171.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhc------cCCceeeeeeeeecCCc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMA------VHRNLLRLRGFCMTPTE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~ 367 (621)
..+|++.+.||+|+||+||+|... +++.||||+++.. .....++.+|+.+++.+ .|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 457899999999999999999865 6899999999653 23345677888888777 46799999999999999
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc--EEEcccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFG 445 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfG 445 (621)
.++||||+. ++|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQ--GFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999997 5999998875432 389999999999999999999999 9999999999999999887 9999999
Q ss_pred cceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCccc
Q 007020 446 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDL 503 (621)
Q Consensus 446 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~ 503 (621)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 248 ~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 248 SSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 99764422 2345689999999999999999999999999999999999999963
No 219
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.5e-39 Score=337.51 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=202.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCch----------------hHHHHHHHHHHHHhccCCceeee
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPG----------------GELQFQTEVEMISMAVHRNLLRL 358 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~E~~~l~~l~h~niv~l 358 (621)
.++|.+.+.||+|+||.||+|.. +|+.||||.+....... ....+.+|+.+++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999999999 89999999986432111 11678999999999999999999
Q ss_pred eeeeecCCceEEEEeccCCCchhhh------hccCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCe
Q 007020 359 RGFCMTPTERLLVYPYMANGSVASC------LRERPPSQLPLDWPTRKRIALGSARGLSYLHD-HCDPKIIHRDVKAANI 431 (621)
Q Consensus 359 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Ni 431 (621)
++++.+.+..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999999 54421 3358999999999999999999999 8 999999999999
Q ss_pred eeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccC-CCCC-cccchhHHHHHHHHHhCCCCcccccccCC
Q 007020 432 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSE-KTDVFGYGIMLLELITGQRAFDLARLAND 509 (621)
Q Consensus 432 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGvil~elltg~~pf~~~~~~~~ 509 (621)
+++.++.+||+|||++...... ......|+..|+|||.+.+. .++. ++||||||+++|||++|..||.....
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--- 257 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS--- 257 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC---
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc---
Confidence 9999999999999999875432 33455699999999999877 5555 99999999999999999999963221
Q ss_pred CcchHHHHHHHHhhhcccccccC------ccc---cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 510 DDVMLLDWVKGLLKEKKLEMLVD------PDL---QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~d------~~~---~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. .+........ ....-.+ +.. ...........+.+++..||+.||++|||+.++++
T Consensus 258 -~---~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 -L---VELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp -S---HHHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -H---HHHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 1112221111 1100000 000 00000223467899999999999999999999976
No 220
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.9e-39 Score=337.19 Aligned_cols=259 Identities=21% Similarity=0.278 Sum_probs=181.7
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecC------C
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------T 366 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 366 (621)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999985 478999999986543 233455788999999999999999999998654 5
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
..++|+||+ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 67999988752 389999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.......
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~p 249 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILRLVGTP 249 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCC
Confidence 9865422 234568999999999987 6789999999999999999999999963221 11111111110000
Q ss_pred c---cccccC----------ccccC----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 526 K---LEMLVD----------PDLQN----NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 526 ~---~~~~~d----------~~~~~----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
. ...+.. +.... .........+.+++..|++.||++|||+.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 000000 00000 0001123568899999999999999999999763
No 221
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=322.33 Aligned_cols=252 Identities=20% Similarity=0.303 Sum_probs=198.2
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC---CchhHHHHHHHHHHHHhccCCceeeeeeeee--cCCce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER---TPGGELQFQTEVEMISMAVHRNLLRLRGFCM--TPTER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 368 (621)
.++|.+.+.||+|+||.||+|... +++.||+|+++... .......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 368999999999999999999974 68899999996542 1234567999999999999999999999984 45678
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
++||||+++| |.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999986 7777765432 2488999999999999999999999 99999999999999999999999999998
Q ss_pred ecccC-CCeeeecccccccccchhhhccCCC--CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 449 LMDYK-DTHVTTAVRGTIGHIAPEYLSTGKS--SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 449 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
..... .........||..|+|||++.+... +.++||||||+++|||++|+.||.... ..+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~~- 228 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIGKG- 228 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHC-
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHhcC-
Confidence 76432 2223344569999999999976543 779999999999999999999996321 11222222111
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.. .... .....+.+++..|++.||++|||++++++.
T Consensus 229 ~~------~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 229 SY------AIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CC------CCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CC------CCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10 1111 123578899999999999999999999863
No 222
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.3e-38 Score=322.83 Aligned_cols=253 Identities=22% Similarity=0.306 Sum_probs=202.7
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--------chhHHHHHHHHHHHHhcc-CCceeeeeeeee
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--------PGGELQFQTEVEMISMAV-HRNLLRLRGFCM 363 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 363 (621)
..++|...+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3468889999999999999999875 689999999965431 122346789999999996 999999999999
Q ss_pred cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcc
Q 007020 364 TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 443 (621)
Q Consensus 364 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 443 (621)
.....++||||+++++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999998643 389999999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCeeeecccccccccchhhhc------cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHH
Q 007020 444 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS------TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDW 517 (621)
Q Consensus 444 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 517 (621)
||++....... ......|+..|+|||++. ...++.++||||||+++|+|++|..||.... ....
T Consensus 168 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~ 237 (298)
T 1phk_A 168 FGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLM 237 (298)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHH
T ss_pred ccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--------HHHH
Confidence 99998765332 233456899999999985 4457889999999999999999999995321 1111
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
........ .. ...+ ........+.+++..|++.||++|||+.++++
T Consensus 238 ~~~~~~~~-~~-~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGN-YQ-FGSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTC-CC-CCTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCC-cc-cCcc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 12111111 00 0001 11223467899999999999999999999975
No 223
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.1e-40 Score=336.56 Aligned_cols=257 Identities=22% Similarity=0.337 Sum_probs=198.6
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-chhHHHHHHHHHHHHhcc--CCceeeeeeeeecC
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-PGGELQFQTEVEMISMAV--HRNLLRLRGFCMTP 365 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 365 (621)
+.+.+..++|.+.+.||+|+||.||++...+++.||||++..... ......+.+|+.++..++ |+||+++++++..+
T Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~ 100 (313)
T 3cek_A 21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100 (313)
T ss_dssp CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence 334455678999999999999999999988899999999975443 334567899999999997 59999999999999
Q ss_pred CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccc
Q 007020 366 TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 445 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 445 (621)
+..++||| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||++++ +.+||+|||
T Consensus 101 ~~~~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 101 QYIYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred CEEEEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecc
Confidence 99999999 66789999998653 388999999999999999999999 9999999999999965 799999999
Q ss_pred cceecccCCCe-eeecccccccccchhhhcc-----------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcch
Q 007020 446 LAKLMDYKDTH-VTTAVRGTIGHIAPEYLST-----------GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 513 (621)
Q Consensus 446 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~ 513 (621)
++......... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.... .
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~ 244 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------N 244 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------S
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-------H
Confidence 99876433221 2234468999999999875 467889999999999999999999995221 0
Q ss_pred HHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 514 LLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
....+..... +.............+.+++..||+.||++||++.++++
T Consensus 245 ~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 245 QISKLHAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHHHHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHh---------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111111111 11111111111357889999999999999999999986
No 224
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.5e-39 Score=341.33 Aligned_cols=262 Identities=22% Similarity=0.282 Sum_probs=191.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCC------ce
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ER 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 368 (621)
..+|...+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++.... ..
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 357888999999999999999987777799998865432 1237999999999999999999985443 27
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC-CCCcEEEcccccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLA 447 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla 447 (621)
++||||++++.+. .+.........+++..++.++.||++||+|||++ +|+||||||+|||++ .++.+||+|||++
T Consensus 114 ~lv~e~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 114 NLVLEYVPETVYR-ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEECCSEEHHH-HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccCccHHH-HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 8999999885443 3332111123488999999999999999999999 999999999999998 7999999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh----
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL---- 522 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---- 522 (621)
+...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+...++...
T Consensus 190 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~l~~i~~~~g~p~~ 263 (394)
T 4e7w_A 190 KILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG----IDQLVEIIKVLGTPSR 263 (394)
T ss_dssp EECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCCCCH
T ss_pred ccccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCH
Confidence 8764332 22345689999999999765 589999999999999999999999963221 111111111100
Q ss_pred ---hh--cccccccCccccC-----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007020 523 ---KE--KKLEMLVDPDLQN-----NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRM 571 (621)
Q Consensus 523 ---~~--~~~~~~~d~~~~~-----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~ 571 (621)
.. .......-+.... .+.......+.+++..||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 0000000000000 0111234678999999999999999999999863
No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.6e-39 Score=345.55 Aligned_cols=260 Identities=25% Similarity=0.341 Sum_probs=192.1
Q ss_pred cCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecC------Cce
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------TER 368 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 368 (621)
.+|...+.||+|+||+||+|++. +|+.||||++..... ...+|+++++.++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 46788899999999999999975 689999999865432 234799999999999999999988532 235
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC-CcEEEcccccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLA 447 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla 447 (621)
++||||+++ ++.+.+.........+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999986 66666553222233489999999999999999999999 99999999999999965 67899999999
Q ss_pred eecccCCCeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh----
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL---- 522 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---- 522 (621)
+....... .....||..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+.+.++...
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIKVLGTPTR 278 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCH
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCH
Confidence 87643322 2345689999999999765 689999999999999999999999963211 111112211100
Q ss_pred ---h--hcccccccCccccCc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 523 ---K--EKKLEMLVDPDLQNN-----YVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 523 ---~--~~~~~~~~d~~~~~~-----~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. .........+..... +.......+.+++..||+.||++|||+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0 000011111111110 11122467899999999999999999999975
No 226
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-38 Score=332.80 Aligned_cols=254 Identities=20% Similarity=0.297 Sum_probs=194.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCce----
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER---- 368 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 368 (621)
.++|...+.||+|+||+||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467888999999999999999865 689999999976443 33355788999999999999999999999877654
Q ss_pred --EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 369 --LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 369 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
++||||+. |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 588888743 288999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++..... .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||..... .+.+.......
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~ 258 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVT 258 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHHH
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHh
Confidence 9865432 334568999999999987 6789999999999999999999999963221 11111111100
Q ss_pred cc------ccc-----------cCccccC---cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 KL------EML-----------VDPDLQN---NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ~~------~~~-----------~d~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ..+ ....... .........+.+++..|++.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 259 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 000 0000000 001122467899999999999999999999975
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=339.72 Aligned_cols=201 Identities=24% Similarity=0.384 Sum_probs=154.1
Q ss_pred cCCCc-CceeeeccCceEEEEEcC---CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeee--cCCceE
Q 007020 296 DSFSN-KNILGRGGFGKVYKGRLA---DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERL 369 (621)
Q Consensus 296 ~~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 369 (621)
+.|.. .++||+|+||+||+|.+. +++.||||++..... ...+.+|+.+++.++||||+++++++. .....+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34554 458999999999999864 578999999975432 336789999999999999999999995 467889
Q ss_pred EEEeccCCCchhhhhccC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee----CCCCcEE
Q 007020 370 LVYPYMANGSVASCLRER-----PPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL----DEEFEAV 440 (621)
Q Consensus 370 lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~k 440 (621)
+||||+.+ +|.+++... ......+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999975 888777532 11223489999999999999999999999 99999999999999 6778999
Q ss_pred EcccccceecccCCC--eeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCccc
Q 007020 441 VGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDL 503 (621)
Q Consensus 441 l~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~ 503 (621)
|+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999987653221 223445699999999999874 489999999999999999999999964
No 228
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.9e-39 Score=329.82 Aligned_cols=264 Identities=25% Similarity=0.368 Sum_probs=199.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEc--CCCcEEEEEEecccCCc-hhHHHHHHHHHHHHhc---cCCceeeeeeeee----
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL--ADGSLVAVKRLKEERTP-GGELQFQTEVEMISMA---VHRNLLRLRGFCM---- 363 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 363 (621)
..++|++.+.||+|+||+||+|.. .+|+.||+|+++..... .....+.+|+.+++.+ .||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 46889999998754322 1223566788777766 8999999999987
Q ss_pred -cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEc
Q 007020 364 -TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 442 (621)
Q Consensus 364 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 442 (621)
.....++||||++ |+|.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 5999999875432 388999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007020 443 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 522 (621)
Q Consensus 443 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 522 (621)
|||++....... ......||..|+|||++.+..++.++||||||+++|+|++|+.||..... ......+....
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~ 235 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQLGKILDVI 235 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHH
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHHc
Confidence 999998654321 22345689999999999999999999999999999999999999963221 11111111111
Q ss_pred hhcccccc----------cC---ccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 523 KEKKLEML----------VD---PDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 523 ~~~~~~~~----------~d---~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
........ .. ..............+.+++..||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 00 00000111223467889999999999999999999985
No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.6e-38 Score=328.12 Aligned_cols=260 Identities=22% Similarity=0.272 Sum_probs=201.3
Q ss_pred HhcCCCcCceeeeccCceEEEEEc--CCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCc------eeeeeeeeecC
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRL--ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN------LLRLRGFCMTP 365 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 365 (621)
..++|++.+.||+|+||+||+|.. .+++.||||+++.. ......+.+|+.+++.++|++ ++++++++...
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 356899999999999999999985 36889999998643 334556889999998887654 99999999999
Q ss_pred CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC----------
Q 007020 366 TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---------- 435 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---------- 435 (621)
+..++||||+ +++|.+++..... .++++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999 7899999987542 3488999999999999999999999 9999999999999987
Q ss_pred ---------CCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007020 436 ---------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL 506 (621)
Q Consensus 436 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~ 506 (621)
++.+||+|||++...... .....||..|+|||++.+..++.++||||||+++|||++|..||.....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred cccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999864432 2345689999999999999999999999999999999999999963221
Q ss_pred cCCCcchHHHHHHHHhhhcc--------cccc---------------------cCc-cccCcccHHHHHHHHHHHHhccC
Q 007020 507 ANDDDVMLLDWVKGLLKEKK--------LEML---------------------VDP-DLQNNYVEAEVEQLIQVALLCTQ 556 (621)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~--------~~~~---------------------~d~-~~~~~~~~~~~~~l~~l~~~c~~ 556 (621)
......+........ .... ..+ .............+.+++..||+
T Consensus 240 -----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 314 (339)
T 1z57_A 240 -----KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314 (339)
T ss_dssp -----HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence 111111111110000 0000 000 00001122345789999999999
Q ss_pred CCCCCCCCHHHHHH
Q 007020 557 GSPMDRPKMSEVVR 570 (621)
Q Consensus 557 ~~P~~RPt~~~vl~ 570 (621)
.||++|||++|+++
T Consensus 315 ~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 315 YDPAKRITLREALK 328 (339)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred cCcccccCHHHHhc
Confidence 99999999999975
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.4e-38 Score=319.29 Aligned_cols=253 Identities=24% Similarity=0.317 Sum_probs=202.2
Q ss_pred HHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccC-CchhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEE
Q 007020 293 VATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEER-TPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 370 (621)
Q Consensus 293 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 370 (621)
...++|.+.+.||+|+||+||+|... +++.||+|++.... .......+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999875 78999999986543 23345678999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC---CcEEEcccccc
Q 007020 371 VYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLA 447 (621)
Q Consensus 371 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla 447 (621)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999999887543 388999999999999999999999 99999999999999754 47999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
....... ......|+..|+|||.+.+ .++.++||||||+++|+|++|+.||.... ..+......... .
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~-~ 239 (287)
T 2wei_A 172 TCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGK-Y 239 (287)
T ss_dssp GTBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C
T ss_pred eeecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC-C
Confidence 8654322 1223458999999999875 48899999999999999999999996321 112222221111 1
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.. ..+. .......+.+++..|++.||++|||+.++++
T Consensus 240 ~~-~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 240 AF-DLPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CC-CSGG-----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CC-Cchh-----hhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 0010 1122367889999999999999999999987
No 231
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.7e-39 Score=326.03 Aligned_cols=251 Identities=25% Similarity=0.401 Sum_probs=191.6
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec---------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT--------- 364 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 364 (621)
.++|+..+.||+|+||.||+|... +++.||||.++.. ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467888999999999999999964 7899999998642 3345678999999999999999999998754
Q ss_pred ----CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEE
Q 007020 365 ----PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAV 440 (621)
Q Consensus 365 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 440 (621)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 356799999999999999998643 2377889999999999999999999 999999999999999999999
Q ss_pred EcccccceecccCC-------------CeeeecccccccccchhhhccC-CCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007020 441 VGDFGLAKLMDYKD-------------THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARL 506 (621)
Q Consensus 441 l~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~pf~~~~~ 506 (621)
|+|||++....... ........|+..|+|||++.+. .++.++||||||+++|||++ ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 99999998654221 1122344589999999999865 68999999999999999998 553111
Q ss_pred cCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 507 ANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
........... . ...............+.+++..|++.||++|||++++++
T Consensus 233 ------~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ------ERVNILKKLRS---V----SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ------HHHHHHHHHHS---T----TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------hHHHHHHhccc---c----ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 01111111111 0 111111222333467889999999999999999999976
No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.8e-39 Score=332.54 Aligned_cols=259 Identities=23% Similarity=0.319 Sum_probs=180.8
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHH-HHHhccCCceeeeeeeeecCCceEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
..++|...+.||+|+||.||+|... +|+.||||+++.........++..|+. +++.++||||+++++++..++..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 4578888999999999999999975 789999999987655555556666666 67778999999999999999999999
Q ss_pred EeccCCCchhhhhccCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 372 YPYMANGSVASCLRERP-PSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
|||+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 999986 8877775311 11234889999999999999999999953 7999999999999999999999999999865
Q ss_pred ccCCCeeeecccccccccchhhh----ccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 451 DYKDTHVTTAVRGTIGHIAPEYL----STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 451 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
.... ......||..|+|||++ .+..++.++||||||+++|+|++|+.||....... +.+..
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~------ 241 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQ------ 241 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CC------
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHH------
Confidence 4322 22233589999999998 45668999999999999999999999996321100 00000
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
......+.+...........+.+++..||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 242 VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00001111111111123367899999999999999999999975
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5e-39 Score=335.17 Aligned_cols=269 Identities=21% Similarity=0.254 Sum_probs=187.5
Q ss_pred HHHHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCc-
Q 007020 290 ELQVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE- 367 (621)
Q Consensus 290 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 367 (621)
......++|.+.+.||+|+||+||+|... +|+.||||++..... ....+.+|+..++.++||||+++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 34566789999999999999999999875 689999999865432 22346678888889999999999999865433
Q ss_pred ------eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCCCeeeCC-CCc
Q 007020 368 ------RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH--DHCDPKIIHRDVKAANILLDE-EFE 438 (621)
Q Consensus 368 ------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlk~~Nill~~-~~~ 438 (621)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999987 554444332222334888999999999999999999 88 9999999999999996 899
Q ss_pred EEEcccccceecccCCCeeeecccccccccchhhhccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHH
Q 007020 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDW 517 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 517 (621)
+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ...+...
T Consensus 171 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~~~ 244 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS----AGQLHEI 244 (360)
T ss_dssp EEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH
T ss_pred EEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh----HHHHHHH
Confidence 9999999998765332 233456899999999987654 89999999999999999999999963221 1111111
Q ss_pred HHHHhh-----------hcccccccCc------cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 518 VKGLLK-----------EKKLEMLVDP------DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 518 ~~~~~~-----------~~~~~~~~d~------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
++.... ........+. .............+.+++..||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111000 0000000000 0000111123567999999999999999999999975
No 234
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.7e-38 Score=331.22 Aligned_cols=264 Identities=20% Similarity=0.270 Sum_probs=198.1
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-----------CCceeeeeeee
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-----------HRNLLRLRGFC 362 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 362 (621)
.++|.+.+.||+|+||+||+|.. .+++.||||+++.. ......+.+|+.+++++. |+||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 46788999999999999999986 47899999998643 234456888999988876 89999999998
Q ss_pred ecCC----ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC----
Q 007020 363 MTPT----ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD---- 434 (621)
Q Consensus 363 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---- 434 (621)
...+ ..++||||+ +++|.+++...... .+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHR--GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTS--CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhcc--CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7643 789999999 88999999875332 3889999999999999999999953 799999999999994
Q ss_pred --CCCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCC--
Q 007020 435 --EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDD-- 510 (621)
Q Consensus 435 --~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~-- 510 (621)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999876432 23346899999999999999999999999999999999999999743211100
Q ss_pred cchHHHHHHHHhhhc-------------------ccccccCc---------cccCcccHHHHHHHHHHHHhccCCCCCCC
Q 007020 511 DVMLLDWVKGLLKEK-------------------KLEMLVDP---------DLQNNYVEAEVEQLIQVALLCTQGSPMDR 562 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~-------------------~~~~~~d~---------~~~~~~~~~~~~~l~~l~~~c~~~~P~~R 562 (621)
...+.+.+. ..... ....+... .............+.+++..||+.||++|
T Consensus 247 ~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 247 DDHIAQIIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHH-hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 001111111 00000 00000000 00112345667889999999999999999
Q ss_pred CCHHHHHH
Q 007020 563 PKMSEVVR 570 (621)
Q Consensus 563 Pt~~~vl~ 570 (621)
||++|+++
T Consensus 326 pt~~ell~ 333 (373)
T 1q8y_A 326 ADAGGLVN 333 (373)
T ss_dssp BCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999976
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-38 Score=340.60 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=186.2
Q ss_pred CCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEEEecc
Q 007020 297 SFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPYM 375 (621)
Q Consensus 297 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 375 (621)
.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+.++..+ +||||+++++++.+....++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 44556789999999998776667999999998643 234578899999876 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCC-------------CcE
Q 007020 376 ANGSVASCLRERPPSQLP---LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE-------------FEA 439 (621)
Q Consensus 376 ~~gsL~~~l~~~~~~~~~---~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-------------~~~ 439 (621)
. |+|.+++......... ..+..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 5999999875432211 13335678999999999999999 99999999999999654 489
Q ss_pred EEcccccceecccCCCe---eeecccccccccchhhhcc-------CCCCCcccchhHHHHHHHHHh-CCCCcccccccC
Q 007020 440 VVGDFGLAKLMDYKDTH---VTTAVRGTIGHIAPEYLST-------GKSSEKTDVFGYGIMLLELIT-GQRAFDLARLAN 508 (621)
Q Consensus 440 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~ 508 (621)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.....
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-- 245 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS-- 245 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT--
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh--
Confidence 99999999876543222 1234569999999999976 568999999999999999999 9999952210
Q ss_pred CCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 509 DDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.....+..... .+.............+.+++..|++.||++|||+.+|++
T Consensus 246 ----~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 ----RESNIIRGIFS--------LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ----HHHHHHHTCCC--------CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----hHHHHhcCCCC--------cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111111110 011111123455678999999999999999999999975
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.5e-38 Score=329.45 Aligned_cols=201 Identities=23% Similarity=0.308 Sum_probs=170.3
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CC-----ceeeeeeeeec
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HR-----NLLRLRGFCMT 364 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~ 364 (621)
+...++|.+.+.||+|+||+||+|... +++.||||+++.. .....++..|+.+++.++ |+ +|+++++++..
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 344678999999999999999999865 6889999999643 233456778888888775 44 49999999999
Q ss_pred CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC--CCCcEEEc
Q 007020 365 PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD--EEFEAVVG 442 (621)
Q Consensus 365 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~~~kl~ 442 (621)
.+..++||||+++ +|.+++...... .+++..+..++.|++.||.|||++ +.+|+||||||+|||++ .++.+||+
T Consensus 128 ~~~~~lv~e~~~~-~L~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 128 RNHLCLVFEMLSY-NLYDLLRNTNFR--GVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp TTEEEEEEECCCC-BHHHHHHHTTTS--CCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred CCceEEEEecCCC-CHHHHHhhcCcC--CCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 9999999999975 999999875422 388999999999999999999952 12899999999999995 47789999
Q ss_pred ccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007020 443 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502 (621)
Q Consensus 443 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~ 502 (621)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 204 DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 204 DFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999876432 234568999999999999999999999999999999999999996
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=326.56 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=194.7
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC-chhHHHHHHHHHHHHhccCCceeeeeeeeecCCc-----
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT-PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----- 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 367 (621)
.++|...+.||+|+||.||+|... +|+.||||.+..... ......+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999864 689999999975443 2334578899999999999999999999987654
Q ss_pred -eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEccccc
Q 007020 368 -RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 446 (621)
Q Consensus 368 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 446 (621)
.++||||+. |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 588888753 288999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCeeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 447 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 447 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++..... .....||..|+|||++.+ ..++.++||||||+++|+|++|+.||..... .+.+.......
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~ 240 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVT 240 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--------HHHHHHHHHHH
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHh
Confidence 9764422 234468999999999977 6789999999999999999999999963221 11111111100
Q ss_pred ---------------------ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 ---------------------KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ---------------------~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
.+.....+.+ ..........+.+++..|++.||++|||++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 241 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CBCCHHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000 0111223467899999999999999999999975
No 238
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=325.70 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=191.0
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeee----------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM---------- 363 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~---------- 363 (621)
.++|...+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 467889999999999999999976 58999999987543 445567899999999999999999999873
Q ss_pred ----cCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC-CCCc
Q 007020 364 ----TPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD-EEFE 438 (621)
Q Consensus 364 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~ 438 (621)
+....++||||++ |+|.+++... ++++..+..++.|++.||+|||++ +|+||||||+||+++ +++.
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 3467799999998 5999998653 388999999999999999999999 999999999999997 5679
Q ss_pred EEEcccccceecccCCC--eeeecccccccccchhhhcc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHH
Q 007020 439 AVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL 515 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~ 515 (621)
+||+|||+++....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... .
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~ 231 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE--------L 231 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------H
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--------H
Confidence 99999999987543211 12233457899999998876 6789999999999999999999999963221 1
Q ss_pred HHHHHHhhhccc-------------cc-----ccCccc-cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 516 DWVKGLLKEKKL-------------EM-----LVDPDL-QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 516 ~~~~~~~~~~~~-------------~~-----~~d~~~-~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
+.+......... .. ...+.. ...........+.+++..|++.||++|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 232 EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111111110000 00 000000 00001123467899999999999999999999976
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.5e-39 Score=329.92 Aligned_cols=247 Identities=23% Similarity=0.391 Sum_probs=199.4
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCch-----hHHHHHHHHHHHHhcc--CCceeeeee
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG-----GELQFQTEVEMISMAV--HRNLLRLRG 360 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--h~niv~l~~ 360 (621)
.+.+...++|.+.+.||+|+||.||+|.. .+++.||||.++...... ....+.+|+.+++.++ |+||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 34445567899999999999999999985 478999999997543221 2235678999999996 599999999
Q ss_pred eeecCCceEEEEeccCC-CchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC-CCCc
Q 007020 361 FCMTPTERLLVYPYMAN-GSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD-EEFE 438 (621)
Q Consensus 361 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~ 438 (621)
++..++..++||||+.+ ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++ +++.
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCC
Confidence 99999999999999986 89999998643 388999999999999999999999 999999999999999 7889
Q ss_pred EEEcccccceecccCCCeeeecccccccccchhhhccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHH
Q 007020 439 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDW 517 (621)
Q Consensus 439 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~ 517 (621)
+||+|||++...... ......||..|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 189 ~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~~ 255 (320)
T 3a99_A 189 LKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EI 255 (320)
T ss_dssp EEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HH
T ss_pred EEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------hh
Confidence 999999999876532 2234569999999999987765 688999999999999999999996321 11
Q ss_pred HHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 518 VKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 518 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ... .... . .....+.+++..||+.||++|||++++++
T Consensus 256 ~----~~~---~~~~----~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 I----RGQ---VFFR----Q----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp H----HCC---CCCS----S----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred h----ccc---cccc----c----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000 0011 1 12257889999999999999999999976
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=328.78 Aligned_cols=244 Identities=23% Similarity=0.371 Sum_probs=190.8
Q ss_pred HHHhcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCch-----hHHHHHHHHHHHHhc----cCCceeeeeee
Q 007020 292 QVATDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPG-----GELQFQTEVEMISMA----VHRNLLRLRGF 361 (621)
Q Consensus 292 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l----~h~niv~l~~~ 361 (621)
+...++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++.++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445678999999999999999999864 68899999996543221 222466799999888 89999999999
Q ss_pred eecCCceEEEEec-cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC-CCCcE
Q 007020 362 CMTPTERLLVYPY-MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD-EEFEA 439 (621)
Q Consensus 362 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~ 439 (621)
+...+..++|||| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 78999999998643 389999999999999999999999 999999999999999 88999
Q ss_pred EEcccccceecccCCCeeeecccccccccchhhhccCCCC-CcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007020 440 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS-EKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV 518 (621)
Q Consensus 440 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 518 (621)
||+|||++....... .....|+..|+|||++.+..+. .++||||||+++|||++|+.||.... ...
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~~~ 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------EIL 246 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HHH
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------HHh
Confidence 999999998765332 2345589999999999877664 58999999999999999999996221 110
Q ss_pred HHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 519 KGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 519 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. . . .... ......+.+++..||+.||++|||++++++
T Consensus 247 ~----~-~------~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 E----A-E------LHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp H----T-C------CCCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred h----h-c------cCCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 0 0011 112357889999999999999999999976
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-38 Score=328.88 Aligned_cols=252 Identities=21% Similarity=0.241 Sum_probs=172.3
Q ss_pred hcCCCcC-ceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec----CCce
Q 007020 295 TDSFSNK-NILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTER 368 (621)
Q Consensus 295 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 368 (621)
.++|.+. ++||+|+||+||+|... +|+.||||++.... .........+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4677774 46999999999999876 68999999986421 112222334567789999999999875 4457
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEEEcccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFG 445 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfG 445 (621)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 999999999999999987542 3489999999999999999999999 9999999999999976 4559999999
Q ss_pred cceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 446 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 446 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... ..... ....
T Consensus 177 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~-~~~~ 248 (336)
T 3fhr_A 177 FAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----GMKRR-IRLG 248 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred cceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----hHHHh-hhcc
Confidence 99865422 2234568999999999988888999999999999999999999996332111000 00000 0000
Q ss_pred ccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 KLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. ..............+.+++..|++.||++|||++++++
T Consensus 249 ~------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 Q------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred c------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 00011111223467889999999999999999999987
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-37 Score=324.17 Aligned_cols=260 Identities=20% Similarity=0.245 Sum_probs=198.0
Q ss_pred HhcCCCcCceeeeccCceEEEEEcC-CC-cEEEEEEecccCCchhHHHHHHHHHHHHhccCCc------eeeeeeeeecC
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLA-DG-SLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN------LLRLRGFCMTP 365 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 365 (621)
..++|.+.+.||+|+||+||+|... ++ +.||+|+++.. ......+.+|+.+++.++|++ ++.+++++...
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 3578999999999999999999864 34 68999998643 334557888999999988766 99999999999
Q ss_pred CceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee------------
Q 007020 366 TERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILL------------ 433 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill------------ 433 (621)
+..++||||+ ++++.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CeEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 9999999999 5577777765432 2488999999999999999999999 99999999999999
Q ss_pred -------CCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007020 434 -------DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL 506 (621)
Q Consensus 434 -------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~ 506 (621)
+.++.+||+|||+++..... .....||..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999864432 2345699999999999999999999999999999999999999963221
Q ss_pred cCCCcchHHHHHHHHhhhc--------c-cccccCccc---------------------cCcccHHHHHHHHHHHHhccC
Q 007020 507 ANDDDVMLLDWVKGLLKEK--------K-LEMLVDPDL---------------------QNNYVEAEVEQLIQVALLCTQ 556 (621)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~--------~-~~~~~d~~~---------------------~~~~~~~~~~~l~~l~~~c~~ 556 (621)
......+....... . ......... ...........+.+++..||+
T Consensus 245 -----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 319 (355)
T 2eu9_A 245 -----REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319 (355)
T ss_dssp -----HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence 11111111111000 0 000000000 000112334678999999999
Q ss_pred CCCCCCCCHHHHHH
Q 007020 557 GSPMDRPKMSEVVR 570 (621)
Q Consensus 557 ~~P~~RPt~~~vl~ 570 (621)
.||++|||++|+++
T Consensus 320 ~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 320 FDPAQRITLAEALL 333 (355)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred CChhhCcCHHHHhc
Confidence 99999999999964
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=319.36 Aligned_cols=252 Identities=22% Similarity=0.338 Sum_probs=179.9
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHH-HHHHHHHHHhccCCceeeeeeeeecCCceEEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.++|+..+.||+|+||.||+|.+. +|+.||||++..........+ +..+..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888899999999999999975 789999999976654444334 444445678889999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
||+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 445555554321 238899999999999999999998 5 89999999999999999999999999997654
Q ss_pred cCCCeeeecccccccccchhhhc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 526 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
... ......|+..|+|||++. ...++.++||||||+++|||++|+.||.... . ..+.+........
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~---~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK----T---DFEVLTKVLQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC----S---HHHHHHHHHHSCC
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC----c---cHHHHHHHhccCC
Confidence 322 223345899999999994 4567899999999999999999999996311 1 1122222222111
Q ss_pred cccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 527 LEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 527 ~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
. .... .......+.+++..||+.||.+||+++++++
T Consensus 248 ~------~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 P------LLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp C------CCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C------CCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 0000 0012357889999999999999999999975
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.5e-38 Score=349.31 Aligned_cols=261 Identities=24% Similarity=0.308 Sum_probs=199.4
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeec------CCc
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMT------PTE 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 367 (621)
.++|.+.+.||+|+||+||+|.+. +|+.||||+++..........+.+|+.+++.++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999874 6899999999876656667789999999999999999999998765 677
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCc---EEEccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDF 444 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~Df 444 (621)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999987542 23488889999999999999999999 9999999999999997664 999999
Q ss_pred ccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhh
Q 007020 445 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 524 (621)
Q Consensus 445 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
|++....... ......||..|+|||.+.+..++.++||||||+++|+|++|..||..... ...|.......
T Consensus 169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-------~~~~~~~i~~~ 239 (676)
T 3qa8_A 169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-------PVQWHGKVREK 239 (676)
T ss_dssp CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-------HHHSSTTCC--
T ss_pred cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-------hhhhhhhhhcc
Confidence 9998765332 23445699999999999999999999999999999999999999963210 11111100000
Q ss_pred ccc----cccc------Cc--cccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 007020 525 KKL----EMLV------DP--DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEV 568 (621)
Q Consensus 525 ~~~----~~~~------d~--~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~v 568 (621)
... .... .. .............+.+++..|+..||++|||++++
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000 0000 00 00112233456789999999999999999999763
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=334.11 Aligned_cols=250 Identities=25% Similarity=0.333 Sum_probs=185.6
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEEE
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 372 (621)
...+|...+.||+|+||+||.....+|+.||||++...... .+.+|+.+++.+ +||||+++++++.+....++||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 34568888999999999966554557899999998654322 356899999998 7999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC-----CCcEEEcccccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE-----EFEAVVGDFGLA 447 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-----~~~~kl~DfGla 447 (621)
||+. |+|.+++...... ..+..+..++.||++||+|||++ +|+||||||+|||++. ...+||+|||++
T Consensus 98 E~~~-g~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp ECCS-EEHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred ECCC-CCHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9997 5999999865422 44456789999999999999999 9999999999999953 336889999999
Q ss_pred eecccCCC--eeeecccccccccchhhhc---cCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHH
Q 007020 448 KLMDYKDT--HVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGIMLLELIT-GQRAFDLARLANDDDVMLLDWVKGL 521 (621)
Q Consensus 448 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 521 (621)
+....... .......||+.|+|||++. ...++.++|||||||++|||++ |..||.... . ......
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~------~---~~~~~~ 241 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL------Q---RQANIL 241 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT------T---HHHHHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh------H---HHHHHH
Confidence 87653321 2234456999999999997 4567889999999999999999 999985211 0 111111
Q ss_pred hhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 522 LKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 522 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
....... ...+ .......+.+++..||+.||++|||+++|++
T Consensus 242 ~~~~~~~-~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSLD-CLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCCT-TSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCcc-ccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111110 0110 1223456789999999999999999999974
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-37 Score=349.85 Aligned_cols=239 Identities=21% Similarity=0.282 Sum_probs=194.3
Q ss_pred hcCCCcCceeeeccCceEEEEEcC--CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCceeeeeeeeecCCc-----
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA--DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----- 367 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 367 (621)
.++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|+.+++.++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999865 5899999998765555556678999999999999999999999987665
Q ss_pred eEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccc
Q 007020 368 RLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 447 (621)
Q Consensus 368 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 447 (621)
.|+||||+++++|.+++.. .+++..++.++.||+.||+|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999987754 389999999999999999999999 99999999999999986 8999999999
Q ss_pred eecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccc
Q 007020 448 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
+..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------------ 284 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------------ 284 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc------------------
Confidence 876432 3456999999999997765 8899999999999999999998863211100
Q ss_pred ccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHhc
Q 007020 528 EMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPK-MSEVVRMLEG 574 (621)
Q Consensus 528 ~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-~~~vl~~L~~ 574 (621)
. ...........+.+++..||+.||++||+ ++++...|.+
T Consensus 285 ---~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 ---P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ---C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ---c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00011123367889999999999999995 5556555543
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6.4e-37 Score=308.40 Aligned_cols=231 Identities=12% Similarity=0.033 Sum_probs=183.5
Q ss_pred hcCCCcCceeeeccCceEEEEEcC-CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
.++|++.+.||+|+||.||+|.+. +++.||||+++.... ......+.+|+..+..++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467888999999999999999975 589999999976543 23346789999999999999999999999999999999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++++|.+++... ....++..++.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999999642 34557889999999999999999 99999999999999999999998554
Q ss_pred cCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhccccccc
Q 007020 452 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLV 531 (621)
Q Consensus 452 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (621)
|++ .++.++||||||+++|||++|+.||........... .....
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--------------~~~~~ 218 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--------------AERDT 218 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------------CCBCT
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------------HHHHh
Confidence 333 257899999999999999999999974332111000 00000
Q ss_pred Ccccc--CcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCC
Q 007020 532 DPDLQ--NNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 577 (621)
Q Consensus 532 d~~~~--~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~~L~~~~~ 577 (621)
..... ..........+.+++..||+.||++| |+.++++.|+....
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00000 00111234678999999999999999 99999999988443
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.4e-37 Score=319.40 Aligned_cols=244 Identities=14% Similarity=0.154 Sum_probs=186.1
Q ss_pred HhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-------chhHHHHHHHHHHHHhcc---------CCceee
Q 007020 294 ATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-------PGGELQFQTEVEMISMAV---------HRNLLR 357 (621)
Q Consensus 294 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------h~niv~ 357 (621)
..++|++.+.||+|+||+||+|++ +|+.||||+++.... ......+.+|+.+++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346788899999999999999998 689999999976532 223367889999988886 555555
Q ss_pred eee-----------------eeec-------------CCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHH
Q 007020 358 LRG-----------------FCMT-------------PTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSA 407 (621)
Q Consensus 358 l~~-----------------~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~ 407 (621)
+.+ ++.+ ....++||||+++|++.+.+.+. .+++..++.++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----CCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-----CCCHHHHHHHHHHHH
Confidence 554 4433 67899999999999877777442 378999999999999
Q ss_pred HHHHHHH-hCCCCCeEecCCCCCCeeeCCCC--------------------cEEEcccccceecccCCCeeeeccccccc
Q 007020 408 RGLSYLH-DHCDPKIIHRDVKAANILLDEEF--------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIG 466 (621)
Q Consensus 408 ~~L~~LH-~~~~~~ivH~Dlk~~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~ 466 (621)
.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 88 999999999999999887 8999999999876532 2369999
Q ss_pred ccchhhhccCCCCCcccchhHHHH-HHHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHH
Q 007020 467 HIAPEYLSTGKSSEKTDVFGYGIM-LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVE 545 (621)
Q Consensus 467 y~aPE~~~~~~~~~~~DvwSlGvi-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 545 (621)
|+|||++.+.. +.++||||+|++ .+++++|..||.. ..|............................
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 310 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDKMLKQMTFKTKCNTPAMKQIKR 310 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHHHHHTCCCSSCCCSHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHhhhhhhccCcccchhhhhhcCH
Confidence 99999998766 889999998776 7889999999952 1222221111000001111122233456678
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHH
Q 007020 546 QLIQVALLCTQGSPMDRPKMSEVV 569 (621)
Q Consensus 546 ~l~~l~~~c~~~~P~~RPt~~~vl 569 (621)
.+.+++..|++.| |++|++
T Consensus 311 ~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 311 KIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHhccC-----CHHHHH
Confidence 8999999999966 999887
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.7e-36 Score=305.18 Aligned_cols=228 Identities=21% Similarity=0.245 Sum_probs=176.6
Q ss_pred cCCCcC-ceeeeccCceEEEEEc-CCCcEEEEEEecccCCchhHHHHHHHHHHH-HhccCCceeeeeeeeec----CCce
Q 007020 296 DSFSNK-NILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPGGELQFQTEVEMI-SMAVHRNLLRLRGFCMT----PTER 368 (621)
Q Consensus 296 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 368 (621)
++|... +.||+|+||.||+|.. .+++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456655 7899999999999986 47899999998642 3467888887 56689999999999876 6678
Q ss_pred EEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCC---CCcEEEcccc
Q 007020 369 LLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFG 445 (621)
Q Consensus 369 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfG 445 (621)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 999999999999999987542 2489999999999999999999999 9999999999999998 7899999999
Q ss_pred cceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhhc
Q 007020 446 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 525 (621)
Q Consensus 446 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++.... +..++.++|||||||++|||++|+.||......... ..
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~~ 209 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------PG 209 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CC
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------HH
Confidence 987532 134567899999999999999999999632211000 00
Q ss_pred ccccccCccc--cCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 526 KLEMLVDPDL--QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 526 ~~~~~~d~~~--~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
....+..... ...........+.+++..||+.||++|||+.|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000000 00001123467899999999999999999999986
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.2e-37 Score=325.50 Aligned_cols=244 Identities=14% Similarity=0.115 Sum_probs=179.2
Q ss_pred hcCCCcCceeeeccCceEEEEEc-CCCcEEEEEEecccCCch--hHHHHHHHHHHHHhccC-Cceeeee-----------
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRL-ADGSLVAVKRLKEERTPG--GELQFQTEVEMISMAVH-RNLLRLR----------- 359 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h-~niv~l~----------- 359 (621)
...|...+.||+|+||+||+|.+ .+|+.||||+++...... ....+.+|+.+++.+.| +|...+.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34566778999999999999995 479999999987443222 24578999999998877 2211111
Q ss_pred ----------eeeec-----CCceEEEEeccCCCchhhhhccC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 007020 360 ----------GFCMT-----PTERLLVYPYMANGSVASCLRER---PPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKI 421 (621)
Q Consensus 360 ----------~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 421 (621)
.++.. ....+++|+++ +++|.+++... ......+++..+..++.||++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111 12356777755 57999988521 11223477889999999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhh----------ccCCCCCcccchhHHHHH
Q 007020 422 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL----------STGKSSEKTDVFGYGIML 491 (621)
Q Consensus 422 vH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGvil 491 (621)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999865432 344567 999999999 444578899999999999
Q ss_pred HHHHhCCCCcccccccCCCcchHHHHHHHHhhhcccccccCccccCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007020 492 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVR 570 (621)
Q Consensus 492 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~~vl~ 570 (621)
|||++|+.||........ ...+.... . ..+..+.+++..||+.||++||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~-----------------~~~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-----------------SEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-----------------SGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhh-----------------HHHHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999964322111 11111100 0 11267899999999999999999988864
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2e-30 Score=284.49 Aligned_cols=186 Identities=14% Similarity=0.076 Sum_probs=131.1
Q ss_pred eeeccCceEEEEE-cCCCcEEEEEEecccCC---------chhHHHHHHHHHHHHhc-cCCceeeeeeeeecCCceEEEE
Q 007020 304 LGRGGFGKVYKGR-LADGSLVAVKRLKEERT---------PGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 304 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 372 (621)
.+.|++|.+..++ ...|+.||+|.+..... .....+|.+|+++|+++ .|+||+++++++.++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5566666655543 22478899999975421 22345699999999999 6999999999999999999999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceeccc
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 452 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 452 (621)
||++|++|.++|..... ++. .+|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~~~----l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE----IDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTCC----CCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCCC----CCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999987542 554 35899999999999999 999999999999999999999999999987653
Q ss_pred CCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCc
Q 007020 453 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501 (621)
Q Consensus 453 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf 501 (621)
.. ......+||+.|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 392 ~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 32 23345679999999999975 4567899999999998887766554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3.8e-27 Score=257.06 Aligned_cols=185 Identities=15% Similarity=0.214 Sum_probs=146.1
Q ss_pred CcCceeeeccCceEEEEEcCCCcEEEEEEecccCCc-h------hHHHHHHHHHHHHhccCCceeeeeeeeecCCceEEE
Q 007020 299 SNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP-G------GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 371 (621)
Q Consensus 299 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 371 (621)
...+.||+|+||+||+|.. .++.+++|........ . ...++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4457899999999999965 4788999986543221 1 123579999999999999999777777777888999
Q ss_pred EeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecc
Q 007020 372 YPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 451 (621)
Q Consensus 372 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 451 (621)
|||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 457999999999999999 9999999999999999 99999999999765
Q ss_pred cCCCee------eecccccccccchhhhcc--CCCCCcccchhHHHHHHHHHhCCCCc
Q 007020 452 YKDTHV------TTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGIMLLELITGQRAF 501 (621)
Q Consensus 452 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~pf 501 (621)
...... .....||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 432211 235679999999999987 56778899999999988888877665
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=5.1e-26 Score=231.86 Aligned_cols=175 Identities=35% Similarity=0.614 Sum_probs=161.3
Q ss_pred cccchhHHHHHHHHHhCCCCCCCCCCCCCCCCCCcc--ceeeEEcCC---CcEEEEEcCCCCccc--cCcccccCCCCCc
Q 007020 20 ASANMEGDALHSLRSNLIDPNNVLQSWDPTLVNPCT--WFHVTCNND---NSVIRVDLGNAALSG--QLVSQLGLLKNLQ 92 (621)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~~---~~l~~L~L~~n~l~~--~~~~~~~~l~~L~ 92 (621)
.|...|.+||++||+++.||. .+++|..+ .+||. |.||+|+.. .+|+.|+|++|+|++ .+|..|..+++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 477789999999999999886 79999764 68998 999999864 799999999999999 8999999999999
Q ss_pred EEEeee-CCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccC
Q 007020 93 YLELYS-NNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNN 171 (621)
Q Consensus 93 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 171 (621)
+|+|++ |++++.+|..|.++++|++|+|++|+|++.+|..|.++++|++|+|++|++++.+|..+..+++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCC-CCCCC-CcccccccCCcc
Q 007020 172 RLSGVVPD-NGSFS-LFTPISFANNLD 196 (621)
Q Consensus 172 ~l~~~~~~-~~~~~-~l~~l~l~~N~~ 196 (621)
+|++..+. ...++ +|+.|++++|..
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCee
Confidence 99966554 46776 899999999975
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=4.1e-24 Score=213.82 Aligned_cols=154 Identities=14% Similarity=0.055 Sum_probs=123.5
Q ss_pred HHHHHHhcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCc-----------------hhHHHHHHHHHHHHhcc
Q 007020 289 RELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTP-----------------GGELQFQTEVEMISMAV 351 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~ 351 (621)
..+......|.+.+.||+|+||.||+|.+.+|+.||+|.++..... .....+.+|+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3444455667778999999999999999977999999999643321 13456889999999998
Q ss_pred CCceeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 007020 352 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANI 431 (621)
Q Consensus 352 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 431 (621)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NI 224 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV 224 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHE
Confidence 5 666665533 56799999999999998 421 13457999999999999999 999999999999
Q ss_pred eeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhcc
Q 007020 432 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 475 (621)
Q Consensus 432 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 475 (621)
|++ ++.+||+|||+|+ .+..|+|||++..
T Consensus 225 Ll~-~~~vkl~DFG~a~--------------~~~~~~a~e~l~r 253 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSV--------------EVGEEGWREILER 253 (282)
T ss_dssp EEE-TTEEEECCCTTCE--------------ETTSTTHHHHHHH
T ss_pred EEE-CCcEEEEECCCCe--------------ECCCCCHHHHHHH
Confidence 999 9999999999997 3445789998853
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.88 E-value=4.4e-23 Score=235.80 Aligned_cols=155 Identities=32% Similarity=0.422 Sum_probs=104.1
Q ss_pred hhhcccchhHHHHHHHHHhCCCCCCCCCCCCCCCCCCccceeeEEcCCCcEEEEEcCCCCcccc---Ccc----------
Q 007020 17 SWLASANMEGDALHSLRSNLIDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQ---LVS---------- 83 (621)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~---~~~---------- 83 (621)
+.+++...|++||++||+++.||. .+++|.. ..+||+|.||+|+ .++|+.|+|+++.++|. +++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSS-NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 333456678899999999999998 8999974 4789999999999 78999999999999886 554
Q ss_pred -------------cccCCCCCcEEEeeeCCCCCCCcc--cccCCCccceeeeccccCCCCCCccc-cccccccccccccc
Q 007020 84 -------------QLGLLKNLQYLELYSNNITGPIPS--DLGNLTSLVSLDLYLNSFTGPIPDTL-GKLSKLRFLRLNNN 147 (621)
Q Consensus 84 -------------~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N 147 (621)
.|+.+++|++|+|++|.+++.+|. .|+++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 555666666666666666666665 66666666666666666665555543 45555555555555
Q ss_pred ccCCCCCCC---ccCCccccEEeeccCcCc
Q 007020 148 SLSGPIPMS---LTNISSLQVLDLSNNRLS 174 (621)
Q Consensus 148 ~l~~~~p~~---~~~l~~L~~L~l~~N~l~ 174 (621)
++++..|.. +.++++|++|++++|.++
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 191 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKIS 191 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEE
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCccc
Confidence 555444333 333333333333333333
No 256
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=9.7e-22 Score=190.64 Aligned_cols=149 Identities=23% Similarity=0.240 Sum_probs=137.3
Q ss_pred CCCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeee
Q 007020 51 VNPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDL 120 (621)
Q Consensus 51 ~~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 120 (621)
.+.|+|.+|.|... .+|+.|+|++|+|++..+..|..+++|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 57899999999752 47999999999999988999999999999999999999777778999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCC
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~ 199 (621)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999777778999999999999999999 78999999999999999999999998764 7789999999999999886
Q ss_pred C
Q 007020 200 P 200 (621)
Q Consensus 200 ~ 200 (621)
+
T Consensus 175 c 175 (229)
T 3e6j_A 175 C 175 (229)
T ss_dssp B
T ss_pred c
Confidence 4
No 257
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=1.2e-22 Score=231.60 Aligned_cols=172 Identities=20% Similarity=0.218 Sum_probs=148.9
Q ss_pred ccchhHHHHHHHHHhCCCCCCCCCCCCCCC----CCC--ccc------------eeeEEcCCCcEEEEEcCCCCccccCc
Q 007020 21 SANMEGDALHSLRSNLIDPNNVLQSWDPTL----VNP--CTW------------FHVTCNNDNSVIRVDLGNAALSGQLV 82 (621)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~c~~~~~l~~L~L~~n~l~~~~~ 82 (621)
+...|..||++||.++.+| +|+.+. .+| |+| .||+|+..++|+.|+|++|+|+|.+|
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 3457888999999999877 786553 355 999 99999988899999999999999999
Q ss_pred ccccCCCCCcEEEe-eeCCCCCC---------------------------------------------------------
Q 007020 83 SQLGLLKNLQYLEL-YSNNITGP--------------------------------------------------------- 104 (621)
Q Consensus 83 ~~~~~l~~L~~L~L-~~N~l~~~--------------------------------------------------------- 104 (621)
+.|++|++|++|+| ++|.++|.
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 77754333
Q ss_pred -------------------CcccccCCCccceeeeccccCCC-----------------CCCcccc--cccccccccccc
Q 007020 105 -------------------IPSDLGNLTSLVSLDLYLNSFTG-----------------PIPDTLG--KLSKLRFLRLNN 146 (621)
Q Consensus 105 -------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~ 146 (621)
+|..|++|++|+.|+|++|+|++ .+|..++ ++++|+.|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 78889999999999999999997 3888877 999999999999
Q ss_pred cccCCCCCCCccCCccccEEeeccCc-Ccc--cCCCC-------CCCCCcccccccCCccc
Q 007020 147 NSLSGPIPMSLTNISSLQVLDLSNNR-LSG--VVPDN-------GSFSLFTPISFANNLDL 197 (621)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~--~~~~~-------~~~~~l~~l~l~~N~~~ 197 (621)
|++.+.+|..|.++++|+.|+|++|+ |++ +|... ..+++|+.|++++|...
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99999999999999999999999998 887 33322 34558999999998754
No 258
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=2.2e-21 Score=186.83 Aligned_cols=149 Identities=22% Similarity=0.324 Sum_probs=136.6
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeec
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLY 121 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 121 (621)
..|.|..|.|... .+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 9 C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 9 CTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp SEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred CEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 4578888998642 379999999999998888899999999999999999998889999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 122 LNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
+|+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|.+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 99999766677899999999999999999988999999999999999999999998874 77899999999999999864
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=3.8e-22 Score=204.43 Aligned_cols=175 Identities=17% Similarity=0.236 Sum_probs=152.9
Q ss_pred cccchhHHHHHHHHHhC-CCCCCCCCCCC---CCCCCCccceeeEEc---------CCCcEEEEEcCCCCccccCccccc
Q 007020 20 ASANMEGDALHSLRSNL-IDPNNVLQSWD---PTLVNPCTWFHVTCN---------NDNSVIRVDLGNAALSGQLVSQLG 86 (621)
Q Consensus 20 ~~~~~~~~~l~~~~~~~-~~~~~~l~~w~---~~~~~~c~w~gv~c~---------~~~~l~~L~L~~n~l~~~~~~~~~ 86 (621)
++...+.+||++||.++ .|+.+.+.+|. ....++|.|.|+.|. ...+|+.|+|++|+|+ .+|+.+.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 34567889999999988 57878888994 445789999999995 2478999999999999 7788899
Q ss_pred CCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccC-------
Q 007020 87 LLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTN------- 159 (621)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------- 159 (621)
.+++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..|.++++|+.|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 88989999999999999999999 78989999999999999999988888887765
Q ss_pred --CccccEEeeccCcCcccCCCCCCCCCcccccccCCccc
Q 007020 160 --ISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 160 --l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
+++|+.|+|++|+|+.++.....+++|+.|++++|...
T Consensus 180 ~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC
T ss_pred ccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC
Confidence 89999999999999977766678889999999998753
No 260
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.85 E-value=4.7e-22 Score=222.29 Aligned_cols=174 Identities=22% Similarity=0.247 Sum_probs=151.5
Q ss_pred cchhHHHHHHHHHhCCCCC--------CCCCCCCCCCCCCccc---eeeEEcCCCcEEEEEcCCCCccccCcccccCCCC
Q 007020 22 ANMEGDALHSLRSNLIDPN--------NVLQSWDPTLVNPCTW---FHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKN 90 (621)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~--------~~l~~w~~~~~~~c~w---~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~ 90 (621)
...|..||.+++.++.++. ....+|+.. .+||.| .||+|+..++|+.|+|++|+++|.+|+.|+.|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 4468889999999886553 124479865 789999 9999988899999999999999999999999999
Q ss_pred CcEEEeeeCC----------------------------------------------------------------------
Q 007020 91 LQYLELYSNN---------------------------------------------------------------------- 100 (621)
Q Consensus 91 L~~L~L~~N~---------------------------------------------------------------------- 100 (621)
|++|+|++|.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 9999999984
Q ss_pred --------CCCCCcccccCCCccceeeeccccCCCC-----------------CCcccc--cccccccccccccccCCCC
Q 007020 101 --------ITGPIPSDLGNLTSLVSLDLYLNSFTGP-----------------IPDTLG--KLSKLRFLRLNNNSLSGPI 153 (621)
Q Consensus 101 --------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~ 153 (621)
|++ +|..|+++++|++|+|++|+|++. +|..++ ++++|++|+|++|++.+.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 344 788899999999999999999985 899998 9999999999999999999
Q ss_pred CCCccCCccccEEeeccCc-Ccc--cCCCCCCC------CCcccccccCCccc
Q 007020 154 PMSLTNISSLQVLDLSNNR-LSG--VVPDNGSF------SLFTPISFANNLDL 197 (621)
Q Consensus 154 p~~~~~l~~L~~L~l~~N~-l~~--~~~~~~~~------~~l~~l~l~~N~~~ 197 (621)
|..|.++++|+.|++++|+ +++ +|.....+ ++|+.|++++|...
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 9999999999999999998 987 44434444 88999999999754
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.5e-20 Score=179.34 Aligned_cols=150 Identities=23% Similarity=0.241 Sum_probs=135.0
Q ss_pred CCCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeee
Q 007020 51 VNPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDL 120 (621)
Q Consensus 51 ~~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 120 (621)
...|.|.+|.|... .+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 34689999999642 36999999999999877778999999999999999999877778899999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCC
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~ 199 (621)
++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|+++++.. ..+++|+.|++++|++.|.
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 999999777777899999999999999999877777899999999999999999998874 7789999999999998775
Q ss_pred C
Q 007020 200 P 200 (621)
Q Consensus 200 ~ 200 (621)
.
T Consensus 164 ~ 164 (208)
T 2o6s_A 164 C 164 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=7.8e-21 Score=182.99 Aligned_cols=150 Identities=19% Similarity=0.247 Sum_probs=134.9
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCc-ccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeee
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLV-SQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDL 120 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 120 (621)
.-|.|..+.|++. ..++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 9 C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 9 CRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 3467888888642 367899999999998755 46899999999999999999888889999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCC
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~ 199 (621)
++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 999999888888999999999999999999888999999999999999999999997655 7899999999999999886
Q ss_pred CC
Q 007020 200 PV 201 (621)
Q Consensus 200 ~~ 201 (621)
+.
T Consensus 169 c~ 170 (220)
T 2v70_A 169 CY 170 (220)
T ss_dssp GG
T ss_pred Cc
Confidence 53
No 263
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=1.2e-19 Score=179.11 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=106.9
Q ss_pred CCCcCceeeeccCceEEEEEc-CCCcE--EEEEEecccCCc-----------------------hhHHHHHHHHHHHHhc
Q 007020 297 SFSNKNILGRGGFGKVYKGRL-ADGSL--VAVKRLKEERTP-----------------------GGELQFQTEVEMISMA 350 (621)
Q Consensus 297 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l 350 (621)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+..+..+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999998 67888 999987543211 0113578899999999
Q ss_pred cCCce--eeeeeeeecCCceEEEEeccCC-C----chhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeE
Q 007020 351 VHRNL--LRLRGFCMTPTERLLVYPYMAN-G----SVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLH-DHCDPKII 422 (621)
Q Consensus 351 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH-~~~~~~iv 422 (621)
.|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 88764 333332 367899999943 4 56655432 224467889999999999999 88 999
Q ss_pred ecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 423 HRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 423 H~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 8999999999754
No 264
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.79 E-value=3.8e-21 Score=207.75 Aligned_cols=143 Identities=20% Similarity=0.198 Sum_probs=103.5
Q ss_pred ccceeeEEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCccccc-CCCccceeeeccccCCCCCCcc
Q 007020 54 CTWFHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLG-NLTSLVSLDLYLNSFTGPIPDT 132 (621)
Q Consensus 54 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~ 132 (621)
|.+.++.|....+|+.|+|++|.|++..|..|+.+++|++|+|++|.|++..|..|. ++++|+.|+|++|.|++. |.
T Consensus 109 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~- 186 (487)
T 3oja_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG- 186 (487)
T ss_dssp SCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-
T ss_pred CcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-
Confidence 455566666666777777777777777777777777777777777777776776665 677777777777777754 22
Q ss_pred cccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCC
Q 007020 133 LGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 133 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~ 199 (621)
+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|.|+++++....+++|+.|++++|++.|+
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 3357777778888887775 44447777778888888888777766666677777777877777664
No 265
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.79 E-value=2.2e-19 Score=176.61 Aligned_cols=131 Identities=21% Similarity=0.242 Sum_probs=107.5
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
+++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 57788888888888777788888888888888888888777778888888888888888887667778888888888888
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCC-CCCCCCcccccccCCcc
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPD-NGSFSLFTPISFANNLD 196 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~ 196 (621)
+|+|++..+..|..+++|+.|+|++|+|+++++. ...+++|+.|++++|..
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 167 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcC
Confidence 8888866666678888888888888888888775 36778888888888864
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.78 E-value=6.8e-19 Score=173.13 Aligned_cols=136 Identities=24% Similarity=0.256 Sum_probs=126.7
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 46899999999999998888999999999999999999988888899999999999999999977777789999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~ 199 (621)
|++|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999877778999999999999999999998854 7889999999999999875
No 267
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.78 E-value=2.1e-19 Score=205.37 Aligned_cols=123 Identities=37% Similarity=0.667 Sum_probs=116.2
Q ss_pred cCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccE
Q 007020 86 GLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQV 165 (621)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 165 (621)
..+++|++|+|++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|..+..+++|++
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCcCcccCCCCCCCCCcccccccCCcccCCCCCCCCCCCC
Q 007020 166 LDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPVTGRPCPGS 209 (621)
Q Consensus 166 L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~~~~~~~c~~~ 209 (621)
|+|++|+++|.+|....+.++....+.+|+.+||.+.. .|...
T Consensus 709 L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 709 IDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp EECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred EECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 99999999999999888999999999999999999876 77543
No 268
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.76 E-value=1.3e-18 Score=172.96 Aligned_cols=131 Identities=21% Similarity=0.231 Sum_probs=90.6
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
+++.|+|++|+|++..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 46667777777776555667777777777777777775555556777777777777777775555566777777777777
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+|++++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 77777666666677777777777777777666653 5667777777777653
No 269
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=2.8e-18 Score=170.86 Aligned_cols=137 Identities=22% Similarity=0.187 Sum_probs=108.5
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 45788888888888877777778888888888888888877777778888888888888888866666678888888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
|++|++++..+..|..+++|+.|++++|+|++.++.. ..+++|+.|++++|++.|..
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 8888888776767778888888888888888877764 67788888888888876653
No 270
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=2.7e-18 Score=172.54 Aligned_cols=136 Identities=25% Similarity=0.161 Sum_probs=111.1
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 356778888888887 5677788888888888888888877777888888888888888888877677788888888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~~ 200 (621)
|++|+|++..+..|..+++|+.|+|++|+|+.++.....+.+|+.+++++||+.|.+
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 888888866666677888888888888888888777777778888888888888764
No 271
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.9e-19 Score=168.15 Aligned_cols=129 Identities=25% Similarity=0.347 Sum_probs=87.5
Q ss_pred EEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcc-cccCCCccceeeeccccCCCCCCccccccccccccccccc
Q 007020 69 RVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPS-DLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNN 147 (621)
Q Consensus 69 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 147 (621)
.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4666666665 45554432 677777777777755543 3677777777777777777666777777777777777777
Q ss_pred ccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 148 SLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 777666666777777777777777777765544 56677777777777776654
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.75 E-value=4.6e-19 Score=180.33 Aligned_cols=136 Identities=26% Similarity=0.423 Sum_probs=109.9
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
+|+.|+|++|.+++.+|..+..++ |++|+|++|++++..|..|.++++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 566666666666666666666665 66666666766666777777888888888888888765554 7788899999999
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCCCCCC
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPVTG 203 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~~~~~ 203 (621)
+|+|++.+|..+..+++|+.|+|++|+|++.+|....+++|+.+++++|+++||.+..
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 9999988999999999999999999999988888888999999999999999997543
No 273
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.75 E-value=4.8e-18 Score=159.77 Aligned_cols=129 Identities=24% Similarity=0.312 Sum_probs=117.0
Q ss_pred EEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccc
Q 007020 69 RVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNS 148 (621)
Q Consensus 69 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 148 (621)
.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 5888899998 5666553 68999999999999 778899999999999999999998888889999999999999999
Q ss_pred cCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCCC
Q 007020 149 LSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGPV 201 (621)
Q Consensus 149 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~~ 201 (621)
|++..|..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99888889999999999999999999998864 778999999999999998653
No 274
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.74 E-value=7e-18 Score=167.77 Aligned_cols=131 Identities=24% Similarity=0.271 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.|+...+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 45666666666665444444555666666666666665544445555555555555555555544445555555555555
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
++|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 555555444444555555555555555555554432 344555555555553
No 275
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=4e-18 Score=160.32 Aligned_cols=150 Identities=23% Similarity=0.261 Sum_probs=125.2
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCcc-cccCCCCCcEEEeeeCCCCCCCcccccCCCccceeee
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVS-QLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDL 120 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 120 (621)
..|.|+.+.|+.. .+++.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 6 C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 85 (192)
T 1w8a_A 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp SEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEEC
Confidence 4578888888642 3799999999999977665 5999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCCC
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~~ 200 (621)
++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+...-...++...+.++...|+.
T Consensus 86 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCC
Confidence 99999988888899999999999999999999999999999999999999999976542211112333345555555654
Q ss_pred C
Q 007020 201 V 201 (621)
Q Consensus 201 ~ 201 (621)
+
T Consensus 166 P 166 (192)
T 1w8a_A 166 P 166 (192)
T ss_dssp S
T ss_pred C
Confidence 3
No 276
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=1.3e-17 Score=154.62 Aligned_cols=135 Identities=24% Similarity=0.293 Sum_probs=96.4
Q ss_pred CCccceeeEEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCc
Q 007020 52 NPCTWFHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD 131 (621)
Q Consensus 52 ~~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 131 (621)
..|+|.++.|. +|+++. +|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+.
T Consensus 5 C~C~~~~l~~~-----------~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 5 CSCSGTEIRCN-----------SKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp CEEETTEEECC-----------SSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CEeCCCEEEec-----------CCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 34677766554 455653 34333 26778888888888766666677788888888888888766566
Q ss_pred ccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 132 TLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 132 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
.|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|+++++.. ..+++|+.|++++|++.|..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 6777888888888888887666666777788888888888888777765 56777888888888776654
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.72 E-value=8.4e-18 Score=187.90 Aligned_cols=133 Identities=17% Similarity=0.140 Sum_probs=121.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+++.|||++|+|+++.+..|.++++|++|+|++|+|+++.|..|.+|++|++|+|++|+|++..++.|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37999999999999888889999999999999999999888889999999999999999999777788999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCC-C-CCCCCCcccccccCCccc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVP-D-NGSFSLFTPISFANNLDL 197 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~~~~l~~l~l~~N~~~ 197 (621)
++|+|++..+..|.++++|++|+|++|.|++... . ...+++|+.|++++|...
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 9999998777789999999999999999987643 3 367899999999999753
No 278
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.71 E-value=6.4e-18 Score=175.48 Aligned_cols=145 Identities=21% Similarity=0.181 Sum_probs=126.8
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCccccc-CCCCCcEEEeeeCCCCCCCcccccCCCccceeee
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLG-LLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDL 120 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 120 (621)
.-|.+..+.|... ..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 3466777777542 3588999999999988888887 9999999999999999888888999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC----CCCCCcccccccCCcc
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN----GSFSLFTPISFANNLD 196 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~----~~~~~l~~l~l~~N~~ 196 (621)
++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++++... ..+++|+.|+|++|..
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 999999777778999999999999999999888899999999999999999999988765 4688999999999864
No 279
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.71 E-value=7.1e-18 Score=172.91 Aligned_cols=140 Identities=16% Similarity=0.144 Sum_probs=100.2
Q ss_pred cCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCC-------------chhHHHH--------HHHHHHHHhccCCc
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERT-------------PGGELQF--------QTEVEMISMAVHRN 354 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~--------~~E~~~l~~l~h~n 354 (621)
.-|++.+.||+|+||.||+|...+|+.||||+++.... ....... .+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999998999999999764211 0011112 23455555554433
Q ss_pred eeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeC
Q 007020 355 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLD 434 (621)
Q Consensus 355 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 434 (621)
+.-..-+.. ...++||||++|++|..+... .....++.|++.+|.|||+. |||||||||.|||++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 321111111 234799999999988765431 13457889999999999999 999999999999998
Q ss_pred CCC----------cEEEcccccceec
Q 007020 435 EEF----------EAVVGDFGLAKLM 450 (621)
Q Consensus 435 ~~~----------~~kl~DfGla~~~ 450 (621)
+++ .+.|+||+-+...
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCCcccccccccceEEEEeCCcccC
Confidence 876 3899999987653
No 280
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.71 E-value=8.8e-18 Score=168.44 Aligned_cols=131 Identities=24% Similarity=0.230 Sum_probs=69.7
Q ss_pred CcEEEEEcCCCC-ccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 65 NSVIRVDLGNAA-LSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
.+|+.|+|++|. ++...+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 345555565554 5544455555555555555555555555555555555555555555555544444455555555555
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
|++|++++..+..|..+++|+.|++++|+|++..+.. ..+++|+.|++++|.
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 5555555443344555555555555555555553322 444555555555553
No 281
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=1.3e-17 Score=153.25 Aligned_cols=130 Identities=24% Similarity=0.258 Sum_probs=118.5
Q ss_pred CcEEEEEcCCCCcc-ccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 65 NSVIRVDLGNAALS-GQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
.+|+.|+|++|+|+ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|+|++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57999999999998 78888899999999999999999966 7899999999999999999987888888899999999
Q ss_pred ccccccCCCC-CCCccCCccccEEeeccCcCcccCC----CCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPI-PMSLTNISSLQVLDLSNNRLSGVVP----DNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~~l~~l~l~~N~~ 196 (621)
|++|+|++.. +..+..+++|+.|++++|+|++.++ ....+++|+.|++++|..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 9999999643 2789999999999999999999887 458899999999999974
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.70 E-value=1.9e-17 Score=177.51 Aligned_cols=137 Identities=23% Similarity=0.234 Sum_probs=129.5
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.+++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47999999999999999999999999999999999999988999999999999999999999888899999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCCC
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGPV 201 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~~ 201 (621)
++|++++..|..|..+++|++|++++|+|+++++.. ..+++|+.|++++|++.|..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999888999999999999999999999988876 789999999999999988654
No 283
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=1.1e-16 Score=148.32 Aligned_cols=114 Identities=25% Similarity=0.252 Sum_probs=104.9
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 58999999999999877788999999999999999999877778999999999999999999877778899999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCC
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVP 178 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 178 (621)
++|+|++..+..+..+++|+.|++++|++.+..+
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999997777678899999999999999997665
No 284
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=6.7e-17 Score=151.94 Aligned_cols=124 Identities=26% Similarity=0.338 Sum_probs=111.6
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeec
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLY 121 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 121 (621)
..|.|..+.|++. .+|+.|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 8 C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 8 CTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 3466777777542 37999999999999 677999999999999999999998888899999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCccc
Q 007020 122 LNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGV 176 (621)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 176 (621)
+|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9999988888999999999999999999977777899999999999999999754
No 285
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.68 E-value=1.3e-17 Score=173.23 Aligned_cols=138 Identities=22% Similarity=0.208 Sum_probs=121.2
Q ss_pred CCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccc
Q 007020 63 NDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 63 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (621)
...+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 45689999999999998888899999999999999999998888889999999999999999998888999999999999
Q ss_pred cccccccCCCCCCCc---cCCccccEEeeccCcCcccCCCC-CCCCC--cccccccCCcccCCC
Q 007020 143 RLNNNSLSGPIPMSL---TNISSLQVLDLSNNRLSGVVPDN-GSFSL--FTPISFANNLDLCGP 200 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~~~~~-~~~~~--l~~l~l~~N~~~~~~ 200 (621)
+|++|+|++..+..| ..+++|+.|+|++|+|+++++.. ..++. ++.|+|++|++.|.+
T Consensus 142 ~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 142 YLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp ECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 999999996544445 57999999999999999887543 44555 478999999999975
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.68 E-value=8.6e-17 Score=161.18 Aligned_cols=132 Identities=24% Similarity=0.232 Sum_probs=116.8
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeecccc-CCCCCCccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNS-FTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ 143 (621)
.+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|. ++...|..|..+++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 478999999999998777889999999999999999998888899999999999999997 8866688899999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
|++|++++..|..|..+++|+.|++++|+++++++.. ..+++|+.|++++|..
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 9999999887888999999999999999999888764 6788999999999864
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.68 E-value=6.2e-17 Score=161.44 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=119.2
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36999999999999888889999999999999999999888888999999999999999999887888999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCccc--CCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGV--VPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++.+..+..+..+++|+.|++++|++++. +.....+++|+.|++++|..
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 99999987777899999999999999999984 34457889999999999964
No 288
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.68 E-value=3.7e-17 Score=169.23 Aligned_cols=145 Identities=23% Similarity=0.274 Sum_probs=123.9
Q ss_pred CCCccceeeEEcC------------CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCcccee
Q 007020 51 VNPCTWFHVTCNN------------DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSL 118 (621)
Q Consensus 51 ~~~c~w~gv~c~~------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 118 (621)
..+|.|.|+ |+. ..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 346777766 532 2479999999999998777799999999999999999998888899999999999
Q ss_pred eeccccCCCCCCcccccccccccccccccccCCCCC-CCccCCccccEEeeccC-cCcccCCCC-CCCCCcccccccCCc
Q 007020 119 DLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIP-MSLTNISSLQVLDLSNN-RLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 119 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N-~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
+|++|+|++..+..|.++++|++|+|++|++++..+ ..+..+++|+.|++++| .+.++++.. ..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999996555569999999999999999995444 47899999999999999 577776654 788999999999996
Q ss_pred c
Q 007020 196 D 196 (621)
Q Consensus 196 ~ 196 (621)
.
T Consensus 186 l 186 (353)
T 2z80_A 186 L 186 (353)
T ss_dssp C
T ss_pred c
Confidence 4
No 289
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=1.3e-17 Score=150.01 Aligned_cols=127 Identities=21% Similarity=0.247 Sum_probs=114.8
Q ss_pred CcEEEEEcCCCCcc-ccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 65 NSVIRVDLGNAALS-GQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
.+|+.|+|++|.++ +.+|..+..+++|++|+|++|+|++. ..|.++++|++|+|++|+|++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999999 78899999999999999999999966 7899999999999999999987888888999999999
Q ss_pred ccccccCCC-CCCCccCCccccEEeeccCcCcccCC----CCCCCCCcccccccC
Q 007020 144 LNNNSLSGP-IPMSLTNISSLQVLDLSNNRLSGVVP----DNGSFSLFTPISFAN 193 (621)
Q Consensus 144 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~~l~~l~l~~ 193 (621)
|++|++++. .+..+..+++|+.|++++|++++.++ ....+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999963 34789999999999999999999887 347788999998863
No 290
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=2.7e-16 Score=156.43 Aligned_cols=132 Identities=26% Similarity=0.281 Sum_probs=120.6
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.+++. +.+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46899999999999963 4899999999999999999988888899999999999999999988788899999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCccc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDL 197 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~ 197 (621)
|++|++++..+..|..+++|+.|++++|+|+++++.. ..+++|+.|++++|...
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 9999999887878899999999999999999988876 77899999999999753
No 291
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.67 E-value=5.2e-17 Score=164.57 Aligned_cols=133 Identities=25% Similarity=0.316 Sum_probs=94.1
Q ss_pred CCcEEEEEcCCCCccccCc-ccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCC-CCCccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLV-SQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTG-PIPDTLGKLSKLRF 141 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 141 (621)
..+|+.|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++ .+|..|..+++|+.
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 4567777777777775544 467777777777777777776666677777777777777777765 45666777777777
Q ss_pred ccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 142 LRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 142 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
|+|++|++++..|..|..+++|+.|++++|+|++.++.. ..+++|+.|++++|..
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 777777777666677777777777777777777665533 5566777777777754
No 292
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.66 E-value=1.1e-16 Score=156.01 Aligned_cols=130 Identities=20% Similarity=0.232 Sum_probs=118.0
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCC-CCCCCcccccCCCccceeeecc-ccCCCCCCcccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNN-ITGPIPSDLGNLTSLVSLDLYL-NSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 142 (621)
.+|+.|+|++|+|++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998888899999999999999997 9977777999999999999999 99997777889999999999
Q ss_pred cccccccCCCCCCCccCCcccc---EEeeccC-cCcccCCCC-CCCCCcc-cccccCCcc
Q 007020 143 RLNNNSLSGPIPMSLTNISSLQ---VLDLSNN-RLSGVVPDN-GSFSLFT-PISFANNLD 196 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~~~~-~~~~~l~-~l~l~~N~~ 196 (621)
+|++|++++ +|. |..+++|+ .|++++| +++++++.. ..+++|+ .|++++|..
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 999999996 666 88888888 9999999 999998874 7789999 999999964
No 293
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.66 E-value=1e-16 Score=164.05 Aligned_cols=131 Identities=21% Similarity=0.356 Sum_probs=120.3
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccc--------
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGK-------- 135 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-------- 135 (621)
..+|++|+|++|.|+ .+|..++.+++|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 357999999999999 88999999999999999999999 78989999999999999999988899987765
Q ss_pred -ccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCccc
Q 007020 136 -LSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 136 -l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++++++....+++|+.|++++|+..
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 999999999999999 7888999999999999999999998887788999999999998754
No 294
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=1.6e-16 Score=176.72 Aligned_cols=133 Identities=17% Similarity=0.174 Sum_probs=122.1
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57999999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcc--cCCCCCCCCCcccccccCCccc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSG--VVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
++|++++..+..+.++++|++|++++|.+++ ++.....+++|+.|++++|...
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~ 166 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcce
Confidence 9999998777889999999999999999986 3444588999999999999653
No 295
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.65 E-value=5.2e-16 Score=155.77 Aligned_cols=127 Identities=25% Similarity=0.221 Sum_probs=62.1
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
+++.|+|++|.|++..+..|..+++|++|+|++|+|++..+ ...+++|++|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 45556666666655555555555555555555555553211 144444455555554444 344444444444444444
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
+|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|.
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 44444443444444444444444444444444433 334444444444443
No 296
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.65 E-value=2.2e-16 Score=151.79 Aligned_cols=115 Identities=21% Similarity=0.204 Sum_probs=108.7
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 46899999999999988888999999999999999999988888899999999999999999988899999999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVP 178 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 178 (621)
|++|+|++..|..|..+++|+.|+|++|++.+..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999986543
No 297
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.65 E-value=1e-16 Score=176.12 Aligned_cols=143 Identities=24% Similarity=0.263 Sum_probs=125.3
Q ss_pred CccceeeEEcCC------------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeee
Q 007020 53 PCTWFHVTCNND------------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDL 120 (621)
Q Consensus 53 ~c~w~gv~c~~~------------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 120 (621)
.|.|.|+ |+.. .+|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4888887 7532 37999999999999888899999999999999999999888899999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccccCC-CCCCCccCCccccEEeeccCc-CcccCC-CCCCCCCcccccccCCcc
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSG-PIPMSLTNISSLQVLDLSNNR-LSGVVP-DNGSFSLFTPISFANNLD 196 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~-l~~~~~-~~~~~~~l~~l~l~~N~~ 196 (621)
++|+|++..|..|+++++|++|+|++|++++ ..|..+.++++|++|++++|+ +..+++ ....+++|+.|++++|..
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 9999998777779999999999999999986 357789999999999999998 555554 347889999999999864
No 298
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=1.4e-16 Score=176.82 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=126.8
Q ss_pred CCCCCCCCCCCCCcc----ceeeEEcC-----------------CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeC
Q 007020 41 NVLQSWDPTLVNPCT----WFHVTCNN-----------------DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSN 99 (621)
Q Consensus 41 ~~l~~w~~~~~~~c~----w~gv~c~~-----------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 99 (621)
..+++|.+. .+||. |.++.|.. ..+++.|++++|.++...+..|..+++|++|+|++|
T Consensus 7 ~~l~~~~~~-~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n 85 (597)
T 3oja_B 7 YNVKPRQPE-YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL 85 (597)
T ss_dssp ----CCCSE-ECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTS
T ss_pred ccccCCCCC-CcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCC
Confidence 357788765 44552 66655531 146788999999999777777889999999999999
Q ss_pred CCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCC
Q 007020 100 NITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPD 179 (621)
Q Consensus 100 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 179 (621)
.|++..|..|.++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|+.|+|++|.|+++++.
T Consensus 86 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 86 QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 99988888999999999999999999988888889999999999999999966666678999999999999999998886
Q ss_pred C-CCCCCcccccccCCcc
Q 007020 180 N-GSFSLFTPISFANNLD 196 (621)
Q Consensus 180 ~-~~~~~l~~l~l~~N~~ 196 (621)
. ..+++|+.|++++|..
T Consensus 166 ~~~~l~~L~~L~L~~N~l 183 (597)
T 3oja_B 166 TFQATTSLQNLQLSSNRL 183 (597)
T ss_dssp TTTTCTTCCEEECTTSCC
T ss_pred hhhcCCcCcEEECcCCCC
Confidence 4 7889999999999864
No 299
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.65 E-value=3.4e-16 Score=150.43 Aligned_cols=126 Identities=22% Similarity=0.249 Sum_probs=114.6
Q ss_pred EEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccccc
Q 007020 68 IRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNN 147 (621)
Q Consensus 68 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 147 (621)
..+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 36999999999 5666554 79999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 148 SLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|+|++|..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 140 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcC
Confidence 999776777899999999999999999998765 7889999999999975
No 300
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.65 E-value=4.7e-16 Score=150.45 Aligned_cols=134 Identities=21% Similarity=0.204 Sum_probs=118.8
Q ss_pred ceeeEEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccc
Q 007020 56 WFHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGK 135 (621)
Q Consensus 56 w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 135 (621)
|..-.|+ .+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|+...+..|..
T Consensus 14 ~~~~~Cs----~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 86 (229)
T 3e6j_A 14 PSQCSCS----GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS 86 (229)
T ss_dssp CTTCEEE----TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCEEe----CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhccc
Confidence 4445675 346999999998 5666554 89999999999999998999999999999999999999766677899
Q ss_pred ccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 136 LSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 136 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+.++.....+++|+.|++++|..
T Consensus 87 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l 147 (229)
T 3e6j_A 87 LTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQL 147 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCC
T ss_pred CCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcC
Confidence 9999999999999998777788999999999999999998887778899999999999975
No 301
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.65 E-value=1.5e-16 Score=166.90 Aligned_cols=132 Identities=19% Similarity=0.198 Sum_probs=118.5
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+++.|++++|.++...+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 57889999999999766667899999999999999999888889999999999999999999888888999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
++|+++...+..|..+++|++|++++|+++++++.. ..+++|+.|++++|..
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcC
Confidence 999999655556789999999999999999988764 7889999999999974
No 302
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.64 E-value=1.1e-16 Score=171.67 Aligned_cols=145 Identities=23% Similarity=0.323 Sum_probs=127.8
Q ss_pred CCcccee--eEEcCC---------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCC-cccccCCCccceee
Q 007020 52 NPCTWFH--VTCNND---------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPI-PSDLGNLTSLVSLD 119 (621)
Q Consensus 52 ~~c~w~g--v~c~~~---------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 119 (621)
..|.|.+ |.|... .+|++|+|++|.|++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3566666 777643 47999999999999988999999999999999999998554 67799999999999
Q ss_pred eccccCCCCCCcccccccccccccccccccCCCCCCC--ccCCccccEEeeccCcCcccCCC--CCCCCCcccccccCCc
Q 007020 120 LYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMS--LTNISSLQVLDLSNNRLSGVVPD--NGSFSLFTPISFANNL 195 (621)
Q Consensus 120 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~~~~~~l~~l~l~~N~ 195 (621)
|++|++++..|..|.++++|++|+|++|++++.+|.. |..+++|++|+|++|+|++..+. ...+++|+.|++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999755544 89999999999999999999776 4788999999999997
Q ss_pred c
Q 007020 196 D 196 (621)
Q Consensus 196 ~ 196 (621)
.
T Consensus 166 l 166 (455)
T 3v47_A 166 V 166 (455)
T ss_dssp B
T ss_pred c
Confidence 5
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=3.5e-16 Score=166.95 Aligned_cols=135 Identities=24% Similarity=0.256 Sum_probs=102.7
Q ss_pred CcEEEEEcCCCCccccCcccc-------------------------cCCCCCcEEEeeeCCCCCCCcccccCCCccceee
Q 007020 65 NSVIRVDLGNAALSGQLVSQL-------------------------GLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLD 119 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~-------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 119 (621)
.+|+.|+|++|.|+...+..| ..+++|++|+|++|+|+ .+| .+..+++|+.|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEE
Confidence 578888888887775554444 44555555556666665 333 366677777777
Q ss_pred eccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccC
Q 007020 120 LYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLC 198 (621)
Q Consensus 120 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~ 198 (621)
|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|+|++||+.|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 7777777766778888888888888888888777888888899999999999999888776 678899999999999988
Q ss_pred CCC
Q 007020 199 GPV 201 (621)
Q Consensus 199 ~~~ 201 (621)
.+.
T Consensus 294 dC~ 296 (440)
T 3zyj_A 294 NCD 296 (440)
T ss_dssp SST
T ss_pred CCC
Confidence 763
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.63 E-value=3e-16 Score=169.32 Aligned_cols=132 Identities=18% Similarity=0.225 Sum_probs=119.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+++.|+|++|+|++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 47889999999999888889999999999999999999888999999999999999999999766677899999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
++|++.+..|..|..+++|+.|++++|.++++.+.. ..+++|+.|++++|..
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCC
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcC
Confidence 999999888889999999999999999999887754 7788999999999864
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=1.1e-16 Score=177.98 Aligned_cols=137 Identities=20% Similarity=0.178 Sum_probs=105.4
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCC-CCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITG-PIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
.+|+.|+|++|.+++..|..+..+++|++|+|++|++++ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 467777777777777777777777777777777777776 3677777888888888888888777777788888888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCC-CcccccccCCcccCCCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFS-LFTPISFANNLDLCGPV 201 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~l~~l~l~~N~~~~~~~ 201 (621)
|++|++++..|..|..+++|+.|++++|+|+.+++....++ +|+.|++++|++.|.+.
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 88888887777778888888888888888887777666665 58888888888877654
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.63 E-value=3.8e-16 Score=167.29 Aligned_cols=141 Identities=22% Similarity=0.238 Sum_probs=124.0
Q ss_pred ceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccC
Q 007020 56 WFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSF 125 (621)
Q Consensus 56 w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 125 (621)
|..|.|... .+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 456777532 4799999999999999999999999999999999999988889999999999999999999
Q ss_pred CCCCCcccccccccccccccccccCCCCCCCccCCccccEEeecc-CcCcccCCCC-CCCCCcccccccCCcc
Q 007020 126 TGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSN-NRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 126 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++ |.+..+++.. ..+++|+.|++++|..
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 977777899999999999999999977777899999999999998 5666665543 7788999999999864
No 307
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=2.2e-16 Score=178.33 Aligned_cols=174 Identities=18% Similarity=0.143 Sum_probs=112.5
Q ss_pred ccchhHHHHHHHHHhCCCC-CCCCCCCCCCCCCCccceeeEEcCC-----------------CcEEEEEcCCCCccc---
Q 007020 21 SANMEGDALHSLRSNLIDP-NNVLQSWDPTLVNPCTWFHVTCNND-----------------NSVIRVDLGNAALSG--- 79 (621)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~-~~~l~~w~~~~~~~c~w~gv~c~~~-----------------~~l~~L~L~~n~l~~--- 79 (621)
....+++++.++...+... ...-..|.......++|.+++++.. ..+..++|++|.|.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 3456677888887665321 2233457555556778887766542 123444555555443
Q ss_pred ------cCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCC
Q 007020 80 ------QLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPI 153 (621)
Q Consensus 80 ------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 153 (621)
..+..|..+++|+.|+|++|.|+ .+|..+.++++|++|+|++|.|+ .+|..|.+|++|+.|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 34677889999999999999999 77778889999999999999999 88999999999999999999999 78
Q ss_pred CCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCccc
Q 007020 154 PMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 154 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
|..|..|++|++|+|++|.|+.++..+..+++|+.|+|++|+..
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCC
T ss_pred ChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccC
Confidence 99999999999999999999988888889999999999999864
No 308
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.63 E-value=2.9e-16 Score=181.30 Aligned_cols=133 Identities=24% Similarity=0.219 Sum_probs=89.3
Q ss_pred CcEEEEEcCCCCccccCcc-cccCCCCCcEEEeeeCCCC-----CCCcccccCCCccceeeeccccCCCCCCcccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVS-QLGLLKNLQYLELYSNNIT-----GPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSK 138 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 138 (621)
.+|+.|+|++|++++..+. .+..+++|++|+|++|.++ +..+..|.++++|+.|+|++|+|++..|..|.++++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 3555666666666543332 3444566666666666665 333445667777777777777777666666777777
Q ss_pred cccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCCCC
Q 007020 139 LRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPV 201 (621)
Q Consensus 139 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~~~ 201 (621)
|+.|+|++|+|++..+..+. ++|+.|+|++|+|++.++.. +.+|+.+++++||+.|.+.
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 77777777777765555554 67777777777777776643 5688999999999999654
No 309
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.63 E-value=1.9e-16 Score=160.43 Aligned_cols=144 Identities=22% Similarity=0.244 Sum_probs=123.3
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCC--CcccccCCCccceee
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGP--IPSDLGNLTSLVSLD 119 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~ 119 (621)
..|.|.+|.|+.. .+|+.|+|++|+|+...+..|..+++|++|+|++|+|+.. .+..+..+++|++|+
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 4589999999752 3799999999999966666789999999999999999833 367788899999999
Q ss_pred eccccCCCCCCcccccccccccccccccccCCCCC-CCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 120 LYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIP-MSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 120 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
|++|.++ .+|..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+.+..+.. ..+++|+.|++++|..
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 162 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 162 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEE
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcc
Confidence 9999998 577778999999999999999986554 57889999999999999999887765 6788999999999875
No 310
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=2.4e-16 Score=175.98 Aligned_cols=138 Identities=22% Similarity=0.265 Sum_probs=126.5
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCC-CCCcccccCCCccceeeeccccCCCCCCcccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNIT-GPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (621)
..+++.++++.|.+++..+..+..+++|+.|+|++|++. +..|..|..+++|+.|+|++|+|++..|..|.++++|+.|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 357889999999999999999999999999999999754 4678899999999999999999999889999999999999
Q ss_pred cccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCC-CCcccccccCCcccCCCC
Q 007020 143 RLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSF-SLFTPISFANNLDLCGPV 201 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~~l~~l~l~~N~~~~~~~ 201 (621)
+|++|+|++..|..|..+++|+.|+|++|+|+++++.. ..+ ++|+.|++++||+.|.+.
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999888889999999999999999999998876 555 689999999999999763
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.63 E-value=2.5e-16 Score=160.42 Aligned_cols=141 Identities=21% Similarity=0.204 Sum_probs=107.7
Q ss_pred ceeeEEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccc-cCCCccceeeeccccCCCCCCcccc
Q 007020 56 WFHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDL-GNLTSLVSLDLYLNSFTGPIPDTLG 134 (621)
Q Consensus 56 w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~ 134 (621)
..++.+....+|+.|+|++|+|++..+..+..+++|++|+|++|+|++..+..+ ..+++|++|+|++|+|++. +. ..
T Consensus 111 l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~ 188 (317)
T 3o53_A 111 ISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QV 188 (317)
T ss_dssp CSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CC
T ss_pred cCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-cc
Confidence 334444445667888888888887777788888888888888888887666666 4688888888888888844 33 33
Q ss_pred cccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCC
Q 007020 135 KLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 135 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~ 199 (621)
.+++|+.|+|++|+|++ +|..+..+++|+.|++++|+|++++.....+++|+.|++++|++.|+
T Consensus 189 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 189 VFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 58888888888888884 45558888888888888888888777677788888888888887764
No 312
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=7.8e-16 Score=153.40 Aligned_cols=136 Identities=20% Similarity=0.239 Sum_probs=94.3
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCC-CCccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGP-IPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 143 (621)
.+|+.|+|++|.|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++. +|..|..+++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 5677778877777776667777777777777777777766665677777777777777777753 467777777777777
Q ss_pred ccccccCCCCCCCccCC---------------------------ccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 144 LNNNSLSGPIPMSLTNI---------------------------SSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l---------------------------~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
|++|++++..+..+..+ .+|+.|++++|+|+++++.. ..+++|+.|++++|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 77777765444333332 35667777777777666654 556777777777777
Q ss_pred ccCCC
Q 007020 196 DLCGP 200 (621)
Q Consensus 196 ~~~~~ 200 (621)
+.|.+
T Consensus 236 ~~c~c 240 (276)
T 2z62_A 236 WDCSC 240 (276)
T ss_dssp BCCCT
T ss_pred ccccC
Confidence 76654
No 313
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.62 E-value=7.2e-16 Score=146.78 Aligned_cols=127 Identities=24% Similarity=0.225 Sum_probs=114.6
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 46899999999999987777889999999999999999987777899999999999999999977777799999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
|++|++++..+..|..+++|+.|++++|.+.+. +++|+.|+++.|..
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~ 177 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKH 177 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHC
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecC------CCCHHHHHHHHHhC
Confidence 999999987777799999999999999988754 45788999988864
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.62 E-value=6.7e-16 Score=165.38 Aligned_cols=136 Identities=25% Similarity=0.263 Sum_probs=109.6
Q ss_pred CCcEEEEEcCCCCccccCccc-------------------------ccCCCCCcEEEeeeCCCCCCCcccccCCCcccee
Q 007020 64 DNSVIRVDLGNAALSGQLVSQ-------------------------LGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSL 118 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 118 (621)
..+|+.|+|++|.|+...+.. |..+++|++|+|++|+|++ +| .+..+++|+.|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEE
Confidence 357888999888887655444 4455666666666666663 33 46777788888
Q ss_pred eeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCccc
Q 007020 119 DLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDL 197 (621)
Q Consensus 119 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~ 197 (621)
+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|+|++|++.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 88888888777888999999999999999999888888999999999999999999888876 67899999999999999
Q ss_pred CCCC
Q 007020 198 CGPV 201 (621)
Q Consensus 198 ~~~~ 201 (621)
|.+.
T Consensus 304 CdC~ 307 (452)
T 3zyi_A 304 CDCD 307 (452)
T ss_dssp CSTT
T ss_pred CCCC
Confidence 8764
No 315
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=3.2e-16 Score=145.01 Aligned_cols=128 Identities=19% Similarity=0.109 Sum_probs=111.0
Q ss_pred CCcEEEEEcCCCCccccCcccccCCC-CCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLK-NLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (621)
..+|+.|+|++|+|+. ++. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|+.|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 4579999999999995 454 55554 999999999999965 689999999999999999996655666999999999
Q ss_pred cccccccCCCCCC--CccCCccccEEeeccCcCcccCCC----CCCCCCcccccccCCcc
Q 007020 143 RLNNNSLSGPIPM--SLTNISSLQVLDLSNNRLSGVVPD----NGSFSLFTPISFANNLD 196 (621)
Q Consensus 143 ~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~~~~~~l~~l~l~~N~~ 196 (621)
+|++|+|. .+|. .+..+++|+.|++++|+++..+.. ...+++|+.|++++|..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 99999997 5666 788999999999999999987764 57789999999999864
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=7.2e-16 Score=171.50 Aligned_cols=133 Identities=21% Similarity=0.174 Sum_probs=123.2
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+++.|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47999999999999988999999999999999999999989999999999999999999999888999999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccC-CCCCCCCCcccccccCCccc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVV-PDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~~l~~l~l~~N~~~ 197 (621)
++|++++..|..+.++++|++|++++|+++++. +....+++|+.|++++|...
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 166 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH 166 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc
Confidence 999999777888999999999999999999864 44556899999999999753
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.60 E-value=1.3e-15 Score=162.62 Aligned_cols=141 Identities=25% Similarity=0.278 Sum_probs=119.2
Q ss_pred ceeeEEcC----------CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccC
Q 007020 56 WFHVTCNN----------DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSF 125 (621)
Q Consensus 56 w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 125 (621)
|..|.|.. ..+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 45677753 24688999999999988889999999999999999999988888999999999999999999
Q ss_pred CCCCCcccccccccccccccccccCCCCCCCccCCccccEEeecc-CcCcccCCCC-CCCCCcccccccCCcc
Q 007020 126 TGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSN-NRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 126 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++ |.+..+++.. ..+++|+.|++++|..
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 197 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcC
Confidence 976677899999999999999999977777888889999999988 4555555543 6788888888888864
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.60 E-value=5.2e-16 Score=146.44 Aligned_cols=126 Identities=18% Similarity=0.286 Sum_probs=80.4
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.++. ++.+..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..|..+..+++|+.|+|
T Consensus 66 ~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 456666666665542 235666667777777777766555666666677777777777766555666666677777777
Q ss_pred cccc-cCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCc
Q 007020 145 NNNS-LSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 145 ~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 195 (621)
++|. +. .+| .+..+++|+.|++++|+|++++ ....+++|+.|++++|+
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC-
T ss_pred cCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcc
Confidence 7776 44 344 4666666777777777766644 44556666777776665
No 319
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.60 E-value=2.9e-15 Score=137.71 Aligned_cols=109 Identities=31% Similarity=0.332 Sum_probs=97.3
Q ss_pred EEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccccc
Q 007020 68 IRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNN 147 (621)
Q Consensus 68 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 147 (621)
+.|++++|+|+. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 468899999994 66655 389999999999999888999999999999999999999777778899999999999999
Q ss_pred ccCCCCCCCccCCccccEEeeccCcCcccCCC
Q 007020 148 SLSGPIPMSLTNISSLQVLDLSNNRLSGVVPD 179 (621)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 179 (621)
+|++..+..|..+++|+.|+|++|++....+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99987777899999999999999999876653
No 320
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.59 E-value=9.4e-16 Score=177.01 Aligned_cols=142 Identities=28% Similarity=0.278 Sum_probs=123.6
Q ss_pred ccceeeEEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCC-cccccCCCccceeeeccccCCCCCCcc
Q 007020 54 CTWFHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPI-PSDLGNLTSLVSLDLYLNSFTGPIPDT 132 (621)
Q Consensus 54 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 132 (621)
|.|..|.+ -..+|+.|||++|.|++..+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|+.
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666766 5578999999999999888999999999999999999666555 788999999999999999999888999
Q ss_pred cccccccccccccccccCCCCCCC--ccCCccccEEeeccCcCcccCCC--CCCCCCcccccccCCcc
Q 007020 133 LGKLSKLRFLRLNNNSLSGPIPMS--LTNISSLQVLDLSNNRLSGVVPD--NGSFSLFTPISFANNLD 196 (621)
Q Consensus 133 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~~~~~~l~~l~l~~N~~ 196 (621)
|.++++|++|+|++|.+++.+|.. |.++++|+.|+|++|.+++..+. ...+++|+.|++++|..
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i 160 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcC
Confidence 999999999999999999866665 88999999999999999987653 47889999999999865
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.59 E-value=2.3e-15 Score=169.84 Aligned_cols=132 Identities=21% Similarity=0.183 Sum_probs=116.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999888888999999999999999999888989999999999999999999655567999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
++|++++..|..|.++++|++|++++|.+++.++.. ..+++|+.|++++|..
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 157 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI 157 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcc
Confidence 999999777788999999999999999999887764 6788999999998864
No 322
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.59 E-value=3.1e-15 Score=153.32 Aligned_cols=141 Identities=20% Similarity=0.258 Sum_probs=122.7
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeec
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLY 121 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 121 (621)
..|.|..+.|... .+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3478999999642 379999999999998888899999999999999999998889999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcc--cCCCC-CCCCCcccccccCCcc
Q 007020 122 LNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSG--VVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+|+|+ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++. ..+.. ..+ +|+.|++++|..
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 99999 6666654 899999999999997777779999999999999999974 44443 444 899999999974
No 323
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.3e-15 Score=168.09 Aligned_cols=136 Identities=26% Similarity=0.349 Sum_probs=92.7
Q ss_pred CcEEEEEcCCCCccccCc-ccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCC-CCCCcccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLV-SQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFT-GPIPDTLGKLSKLRFL 142 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L 142 (621)
.+|+.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..|.++++|+.|+|++|.++ +.+|..|..+++|+.|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 355556666666655444 35666667777777777776666666777777777777777766 4566677777777777
Q ss_pred cccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 143 RLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
+|++|++++..|..|..+++|+.|++++|+|++.++.. ..+++|+.|++++|++.|..
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 77777777666777777777777777777777776654 56677777777777766643
No 324
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=4.4e-15 Score=136.96 Aligned_cols=109 Identities=28% Similarity=0.266 Sum_probs=96.7
Q ss_pred EEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccccc
Q 007020 68 IRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNN 147 (621)
Q Consensus 68 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 147 (621)
+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56999999998 5676664 89999999999999888999999999999999999999766667899999999999999
Q ss_pred ccCCCCCCCccCCccccEEeeccCcCcccCCC
Q 007020 148 SLSGPIPMSLTNISSLQVLDLSNNRLSGVVPD 179 (621)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 179 (621)
+|++..+..|..+++|+.|+|++|+|...+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 99976666799999999999999999876653
No 325
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=1.1e-15 Score=144.31 Aligned_cols=128 Identities=16% Similarity=0.256 Sum_probs=114.7
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|+ .+| .+..+++|++|+|++|.++ .+ ..+..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 357999999999999 455 6999999999999999887 33 4899999999999999999987888999999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCc-CcccCCCCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNR-LSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
|++|++++..|..+..+++|+.|++++|+ ++.++ ....+++|+.|++++|..
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCC
Confidence 99999998788889999999999999998 77664 567889999999999964
No 326
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=4e-15 Score=163.93 Aligned_cols=137 Identities=26% Similarity=0.319 Sum_probs=89.7
Q ss_pred CCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCC--CcccccCCCccceeeeccccCCCCCCc-cccccccc
Q 007020 63 NDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGP--IPSDLGNLTSLVSLDLYLNSFTGPIPD-TLGKLSKL 139 (621)
Q Consensus 63 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L 139 (621)
...+|+.|+|++|.+++.+|..+..+++|++|+|++|+|++. +|..|.++++|+.|+|++|++++.+|. .+..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 446788888888888887888888888888888888888853 245678888888888888888864544 35555555
Q ss_pred ccccccccccCC---------------------CCCCCccCCccccEEeeccCcCcccCCC-CCCCCCcccccccCCccc
Q 007020 140 RFLRLNNNSLSG---------------------PIPMSLTNISSLQVLDLSNNRLSGVVPD-NGSFSLFTPISFANNLDL 197 (621)
Q Consensus 140 ~~L~l~~N~l~~---------------------~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~ 197 (621)
+.|+|++|++++ .+|..+..+++|+.|+|++|+|+++++. ...+++|+.|++++|++.
T Consensus 431 ~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp CEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred CEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 555555555443 3444444555556666666665555554 345555556666666555
Q ss_pred CC
Q 007020 198 CG 199 (621)
Q Consensus 198 ~~ 199 (621)
|.
T Consensus 511 c~ 512 (562)
T 3a79_B 511 CT 512 (562)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 327
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=4.4e-15 Score=136.43 Aligned_cols=108 Identities=23% Similarity=0.307 Sum_probs=98.1
Q ss_pred CCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeec
Q 007020 90 NLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLS 169 (621)
Q Consensus 90 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 169 (621)
..+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 5776663 899999999999998889999999999999999999998777788999999999999
Q ss_pred cCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 170 NNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 170 ~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
+|+|+++++.. ..+++|+.|+|++|++.|.+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999999874 78999999999999998865
No 328
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.57 E-value=1.9e-15 Score=170.56 Aligned_cols=137 Identities=25% Similarity=0.261 Sum_probs=104.9
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCc--------ccccCCCccceeeeccccCCCCCCcccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIP--------SDLGNLTSLVSLDLYLNSFTGPIPDTLGKL 136 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 136 (621)
.+|+.|+|++|+|++..+..|..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|.++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 467788888888887667777888888888888888774321 236778888888888888884444568888
Q ss_pred cccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-C-CCCCcccccccCCcccCCCC
Q 007020 137 SKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-G-SFSLFTPISFANNLDLCGPV 201 (621)
Q Consensus 137 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~~l~~l~l~~N~~~~~~~ 201 (621)
++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++++.. . .+++|+.+++++||+.|.+.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 88888888888888666666788888888888888888877654 2 57788899999999988754
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.57 E-value=2.3e-15 Score=146.64 Aligned_cols=130 Identities=18% Similarity=0.182 Sum_probs=116.5
Q ss_pred CCcEEEEEcCCCC-ccccCcccccCCCCCcEEEeee-CCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccc-
Q 007020 64 DNSVIRVDLGNAA-LSGQLVSQLGLLKNLQYLELYS-NNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLR- 140 (621)
Q Consensus 64 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~- 140 (621)
..+|+.|+|++|. ++...+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|+|++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 4689999999997 9877777999999999999999 99997777889999999999999999995 676 88888888
Q ss_pred --ccccccc-ccCCCCCCCccCCcccc-EEeeccCcCcccCCCCCCCCCcccccccCCc
Q 007020 141 --FLRLNNN-SLSGPIPMSLTNISSLQ-VLDLSNNRLSGVVPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 141 --~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 195 (621)
.|+|++| ++++..+..|..+++|+ .|++++|+|+.+++.....++|+.|++++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99977777899999999 9999999999887776555889999999995
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.57 E-value=1.8e-15 Score=163.25 Aligned_cols=133 Identities=18% Similarity=0.158 Sum_probs=122.2
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 46899999999999998899999999999999999999977777899999999999999999988889999999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
|++|.+.+..+..|..+++|+.|++++|+++++++.. ..+++|+.|++++|..
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i 188 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNI 188 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcC
Confidence 9999999888889999999999999999999887653 7788999999999864
No 331
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.57 E-value=3e-15 Score=163.28 Aligned_cols=137 Identities=23% Similarity=0.282 Sum_probs=89.8
Q ss_pred CCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCC--CCcccccCCCccceeeeccccCCCCCCcc-ccccccc
Q 007020 63 NDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITG--PIPSDLGNLTSLVSLDLYLNSFTGPIPDT-LGKLSKL 139 (621)
Q Consensus 63 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L 139 (621)
...+|+.|+|++|.+++.+|..+..+++|++|+|++|+|++ .+|..|.++++|++|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34578888888888887777788888888888888888875 44566778888888888888887645543 5555555
Q ss_pred ccccccccccCC---------------------CCCCCccCCccccEEeeccCcCcccCCC-CCCCCCcccccccCCccc
Q 007020 140 RFLRLNNNSLSG---------------------PIPMSLTNISSLQVLDLSNNRLSGVVPD-NGSFSLFTPISFANNLDL 197 (621)
Q Consensus 140 ~~L~l~~N~l~~---------------------~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~ 197 (621)
+.|+|++|++++ .+|..+..+++|+.|++++|+|+++++. ...+++|+.|++++|++.
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 481 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481 (520)
T ss_dssp CEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCc
Confidence 555555554443 4444445566666666666666655554 345556666666666655
Q ss_pred CC
Q 007020 198 CG 199 (621)
Q Consensus 198 ~~ 199 (621)
|.
T Consensus 482 c~ 483 (520)
T 2z7x_B 482 CS 483 (520)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 332
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.57 E-value=2.8e-15 Score=164.18 Aligned_cols=121 Identities=24% Similarity=0.261 Sum_probs=108.7
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
.|+.|+|++|+|++ +|. |+.+++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|+.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999996 565 999999999999999999 889999999999999999999996 67 89999999999999
Q ss_pred ccccCCCC-CCCccCCccccEEeeccCcCcccCCCCC----CCCCcccccc
Q 007020 146 NNSLSGPI-PMSLTNISSLQVLDLSNNRLSGVVPDNG----SFSLFTPISF 191 (621)
Q Consensus 146 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~----~~~~l~~l~l 191 (621)
+|+|++.. |..|..+++|+.|+|++|+|++.++... .+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999876 9999999999999999999999988653 2677777753
No 333
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.57 E-value=2.7e-15 Score=155.13 Aligned_cols=133 Identities=18% Similarity=0.205 Sum_probs=118.7
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCC-cccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIP-DTLGKLSKLRFL 142 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 142 (621)
..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+ ..|..+++|+.|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 4689999999999998888999999999999999999997666669999999999999999995433 479999999999
Q ss_pred ccccc-ccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 143 RLNNN-SLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 143 ~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+|++| .+.+..+..|..+++|+.|++++|++++..+.. ..+++|+.|++++|..
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999 577666788999999999999999999986654 7889999999999863
No 334
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.56 E-value=3.2e-15 Score=153.02 Aligned_cols=142 Identities=22% Similarity=0.296 Sum_probs=123.5
Q ss_pred CCccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeec
Q 007020 52 NPCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLY 121 (621)
Q Consensus 52 ~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 121 (621)
..|.|+.+.|... .+++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4578999999642 478999999999998888899999999999999999998889999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcc--cCCC-CCCCCCcccccccCCcc
Q 007020 122 LNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSG--VVPD-NGSFSLFTPISFANNLD 196 (621)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~-~~~~~~l~~l~l~~N~~ 196 (621)
+|+|+ .+|..+. ++|+.|++++|++++..+..|..+++|+.|++++|.++. ..+. ...+++|+.|++++|..
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 99999 5666554 799999999999997777778999999999999999974 3333 36788999999999864
No 335
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.56 E-value=7.5e-15 Score=135.39 Aligned_cols=107 Identities=22% Similarity=0.252 Sum_probs=97.1
Q ss_pred CcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeecc
Q 007020 91 LQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSN 170 (621)
Q Consensus 91 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 170 (621)
-+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999998 6777664 8999999999999988899999999999999999999977677789999999999999
Q ss_pred CcCcccCCC-CCCCCCcccccccCCcccCCC
Q 007020 171 NRLSGVVPD-NGSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 171 N~l~~~~~~-~~~~~~l~~l~l~~N~~~~~~ 200 (621)
|+|+++++. ...+++|+.|+|++|++.|.+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999999987 478999999999999998764
No 336
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.56 E-value=1.1e-15 Score=170.04 Aligned_cols=135 Identities=20% Similarity=0.218 Sum_probs=76.9
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCC---CcccccCCCccceeeeccccCCCCCCccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGP---IPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRF 141 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 141 (621)
.+|+.|+|++|.+++..|..+..+++|++|+|++|++++. .+..|..+++|+.|+|++|++++..|..|..+++|+.
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 504 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCE
Confidence 3455555555555555555555555555555555555531 2234555555555555555555555555556666666
Q ss_pred ccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCC
Q 007020 142 LRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGP 200 (621)
Q Consensus 142 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~ 200 (621)
|+|++|++++..|..+..+++| .|++++|++++.++.. ..+++|+.|++++|++.|.+
T Consensus 505 L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 505 VDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp EECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred EECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 6666666655555556666666 6666666666555543 44566667777777766643
No 337
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.56 E-value=3e-15 Score=165.16 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=115.5
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46889999999999888888999999999999999999888888999999999999999999777788999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCccc--CCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGV--VPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++++..+..+.++++|++|++++|.++++ +.....+++|+.|++++|..
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l 161 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc
Confidence 99999976666789999999999999999874 44457788999999999864
No 338
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.56 E-value=7.1e-15 Score=154.19 Aligned_cols=130 Identities=23% Similarity=0.172 Sum_probs=118.5
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 58999999999999888889999999999999999999888889999999999999999999555555799999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++++..|..|..+++|+.|++++|++++.+ ...+++|+.|++++|..
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLL 198 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCC
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccc
Confidence 999999888888999999999999999999874 45678899999998853
No 339
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=6.5e-15 Score=163.33 Aligned_cols=131 Identities=23% Similarity=0.160 Sum_probs=120.0
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++..+..|..+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|++|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 35899999999999998888999999999999999999998888999999999999999999976666689999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
|++|.|++..|..|..+++|+.|+|++|.|++.+ ...+++|+.|++++|..
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCcc
Confidence 9999999988989999999999999999999874 35678888899888854
No 340
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=5.6e-16 Score=157.41 Aligned_cols=129 Identities=19% Similarity=0.178 Sum_probs=61.7
Q ss_pred cEEEEEcCCCCccccCcccc--cCCCCCcEEEeeeCCCCCCCcccccCC-----CccceeeeccccCCCCCCcccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQL--GLLKNLQYLELYSNNITGPIPSDLGNL-----TSLVSLDLYLNSFTGPIPDTLGKLSK 138 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~ 138 (621)
+|+.|+|++|+|++.+|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|..+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 45555555555555444443 4555555555555555543 4444444 55555555555555444455555555
Q ss_pred cccccccccccCCC--CCCCc--cCCccccEEeeccCcCcccCC---CC-CCCCCcccccccCCc
Q 007020 139 LRFLRLNNNSLSGP--IPMSL--TNISSLQVLDLSNNRLSGVVP---DN-GSFSLFTPISFANNL 195 (621)
Q Consensus 139 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~~~---~~-~~~~~l~~l~l~~N~ 195 (621)
|+.|+|++|++.+. .|..+ ..+++|+.|++++|+|++.+. .. ..+++|+.|++++|.
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 55555555554432 11112 444555555555555542211 11 233455555555554
No 341
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.54 E-value=1.4e-14 Score=148.36 Aligned_cols=130 Identities=24% Similarity=0.271 Sum_probs=63.5
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCC--CCCcccccCC--------------------Cccceeeeccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNIT--GPIPSDLGNL--------------------TSLVSLDLYLN 123 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l--------------------~~L~~L~L~~N 123 (621)
+|+.|+|++|.|++..+..|..+++|++|+|++|.++ +..+..|..+ ++|+.|+|++|
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHN 203 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSS
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCC
Confidence 3444444444444433444555555555555555553 2334444333 23333444444
Q ss_pred cCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCc
Q 007020 124 SFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 195 (621)
+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|+|+.++.....+++|+.|++++|+
T Consensus 204 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 204 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCC
Confidence 444333344555555555555555555444444555555555555555555444444445555555555554
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.54 E-value=3.7e-15 Score=151.15 Aligned_cols=129 Identities=18% Similarity=0.128 Sum_probs=76.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCC--C--cccccCCCccceeeeccccCCCCCCc----ccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGP--I--PSDLGNLTSLVSLDLYLNSFTGPIPD----TLGKL 136 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l 136 (621)
.+|+.|+|++|+|++..+..|..+++|++|+|++|++.+. + +..+.++++|++|+|++|+|+ .++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 3566666666666665556666666666666666665531 1 122355666666666666665 2333 23556
Q ss_pred cccccccccccccCCCCCCCccCC---ccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 137 SKLRFLRLNNNSLSGPIPMSLTNI---SSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 137 ~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+.++.... ++|+.|++++|..
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l 284 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRL 284 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcC
Confidence 666666666666666556555555 466666676666665544332 5666666666653
No 343
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.54 E-value=2.4e-15 Score=152.79 Aligned_cols=132 Identities=21% Similarity=0.182 Sum_probs=90.2
Q ss_pred CCcEEEEEcCCCCccccCcccccCC-----CCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCC--CCccc--c
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLL-----KNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGP--IPDTL--G 134 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~ 134 (621)
..+|+.|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. ++..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45677888888888766 6666666 7788888888888777777778888888888888876643 22333 6
Q ss_pred cccccccccccccccCCC--CC-CCccCCccccEEeeccCcCcccCC--CCCCCCCcccccccCCcc
Q 007020 135 KLSKLRFLRLNNNSLSGP--IP-MSLTNISSLQVLDLSNNRLSGVVP--DNGSFSLFTPISFANNLD 196 (621)
Q Consensus 135 ~l~~L~~L~l~~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~~ 196 (621)
.+++|+.|+|++|+|++. ++ ..+..+++|+.|++++|+|++.++ ....+++|+.|++++|..
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 265 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCC
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCcc
Confidence 777777777777777621 11 223456777777777777777653 224466777777777764
No 344
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.54 E-value=1.5e-15 Score=169.47 Aligned_cols=143 Identities=22% Similarity=0.321 Sum_probs=125.0
Q ss_pred ccceeeEE--cCCCcEEEEEcCCCCcccc-----------------Cccccc--CCCCCcEEEeeeCCCCCCCcccccCC
Q 007020 54 CTWFHVTC--NNDNSVIRVDLGNAALSGQ-----------------LVSQLG--LLKNLQYLELYSNNITGPIPSDLGNL 112 (621)
Q Consensus 54 c~w~gv~c--~~~~~l~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 112 (621)
+...|+.- .+..+|+.|+|++|.|++. +|..++ ++++|++|+|++|++.+.+|..|.++
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 45556431 2357899999999999986 999999 99999999999999999999999999
Q ss_pred Cccceeeecccc-CCC-CCCcccccc------cccccccccccccCCCCCC--CccCCccccEEeeccCcCcccCCCCCC
Q 007020 113 TSLVSLDLYLNS-FTG-PIPDTLGKL------SKLRFLRLNNNSLSGPIPM--SLTNISSLQVLDLSNNRLSGVVPDNGS 182 (621)
Q Consensus 113 ~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~~ 182 (621)
++|++|+|++|+ +++ .+|..++.+ ++|+.|+|++|+++ .+|. .+.++++|+.|++++|+++|..|....
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~ 351 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGS 351 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCC
Confidence 999999999998 998 789888887 99999999999999 7888 899999999999999999966666677
Q ss_pred CCCcccccccCCccc
Q 007020 183 FSLFTPISFANNLDL 197 (621)
Q Consensus 183 ~~~l~~l~l~~N~~~ 197 (621)
+++|+.|++++|...
T Consensus 352 l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 352 EIKLASLNLAYNQIT 366 (636)
T ss_dssp EEEESEEECCSSEEE
T ss_pred CCCCCEEECCCCccc
Confidence 888999999988754
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.53 E-value=6.8e-15 Score=162.07 Aligned_cols=127 Identities=20% Similarity=0.172 Sum_probs=113.4
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999888899999999999999999999888999999999999999999999 67766 8999999999
Q ss_pred cccccCCC-CCCCccCCccccEEeeccCcCcccCCCCCCCCCc--ccccccCCcc
Q 007020 145 NNNSLSGP-IPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLF--TPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l--~~l~l~~N~~ 196 (621)
++|++++. +|..|.++++|++|++++|+|++. ....+++| +.|++++|..
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccc
Confidence 99999963 468999999999999999999863 33455566 9999999864
No 346
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.53 E-value=1.6e-14 Score=144.95 Aligned_cols=124 Identities=27% Similarity=0.366 Sum_probs=98.0
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|++..+ +..+++|++|+|++|+|++ ++ .+..+++|+.|+|++|+|++. +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEE
Confidence 3578888888888886544 8888888888888888885 33 488888888888888888853 4577888888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
|++|++++. ..+..+++|+.|++++|+|++.++ ...+++|+.|++++|..
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcC
Confidence 888888854 567788888888888888888766 66778888888888854
No 347
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.53 E-value=1.4e-14 Score=143.14 Aligned_cols=126 Identities=21% Similarity=0.228 Sum_probs=98.2
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|++..+ +..+++|++|+|++|+|++ +|. +.. ++|+.|+|++|+|++ ++ .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 3578888888888886544 8888888888888888885 333 333 888888888888885 33 588888888999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCG 199 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~ 199 (621)
|++|+|++. + .+..+++|+.|++++|+|++. .....+++|+.|++++|+..+.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 999988854 3 678888899999999988887 5557788888889988886554
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.52 E-value=1.7e-14 Score=144.73 Aligned_cols=127 Identities=30% Similarity=0.315 Sum_probs=113.0
Q ss_pred CCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccc
Q 007020 63 NDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 63 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (621)
...+|+.|+|++|.|++ + +.+..+++|++|+|++|+|++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|
T Consensus 88 ~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 161 (291)
T 1h6t_A 88 NLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 161 (291)
T ss_dssp TCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCCCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEE
Confidence 45689999999999996 3 4499999999999999999964 4799999999999999999965 679999999999
Q ss_pred cccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccC
Q 007020 143 RLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLC 198 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~ 198 (621)
+|++|++++..+ +..+++|+.|++++|+|++++. ...+++|+.|++++|+..+
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGG-GTTCTTCSEEEEEEEEEEC
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCCCChh-hccCCCCCEEECcCCcccC
Confidence 999999997655 8999999999999999998754 6788999999999998654
No 349
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.52 E-value=1.9e-14 Score=147.22 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=75.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCC--CCcccccCCCccceeeeccccCCCCCCcccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITG--PIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (621)
.+|+.|+|++|.+++..+..|..+++|++|+|++|.++. ..+..|.++++|+.|+|++|+++ .+|..+. ++|+.|
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L 197 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTEL 197 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEE
Confidence 467788888888877666677777777777777777753 55666777766666666666665 3333322 455555
Q ss_pred cccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 143 RLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
+|++|++++..|..|..+++|+.|++++|+|++.++.. ..+++|+.|++++|.
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 55555555444444555555555555555555444422 344455555555554
No 350
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=3.9e-15 Score=169.87 Aligned_cols=142 Identities=20% Similarity=0.257 Sum_probs=123.9
Q ss_pred ccceeeEE--cCCCcEEEEEcCCCCccc-----------------cCccccc--CCCCCcEEEeeeCCCCCCCcccccCC
Q 007020 54 CTWFHVTC--NNDNSVIRVDLGNAALSG-----------------QLVSQLG--LLKNLQYLELYSNNITGPIPSDLGNL 112 (621)
Q Consensus 54 c~w~gv~c--~~~~~l~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 112 (621)
+...|+.- .+..+|+.|+|++|.|++ .+|+.++ ++++|++|+|++|++.+.+|..|.+|
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 45555432 235789999999999998 3889887 99999999999999999999999999
Q ss_pred Cccceeeecccc-CCC-CCCccccccc-------ccccccccccccCCCCCC--CccCCccccEEeeccCcCcccCCCCC
Q 007020 113 TSLVSLDLYLNS-FTG-PIPDTLGKLS-------KLRFLRLNNNSLSGPIPM--SLTNISSLQVLDLSNNRLSGVVPDNG 181 (621)
Q Consensus 113 ~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~ 181 (621)
++|+.|+|++|+ |++ .+|..+..++ +|+.|+|++|+|+ .+|. .|.++++|+.|+|++|+|+.++ ...
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~ 592 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE-AFG 592 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC-CCC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch-hhc
Confidence 999999999998 987 7888777776 9999999999999 8888 8999999999999999999555 678
Q ss_pred CCCCcccccccCCccc
Q 007020 182 SFSLFTPISFANNLDL 197 (621)
Q Consensus 182 ~~~~l~~l~l~~N~~~ 197 (621)
.+++|+.|++++|...
T Consensus 593 ~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 593 TNVKLTDLKLDYNQIE 608 (876)
T ss_dssp TTSEESEEECCSSCCS
T ss_pred CCCcceEEECcCCccc
Confidence 8899999999999754
No 351
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.52 E-value=1.6e-14 Score=146.22 Aligned_cols=125 Identities=28% Similarity=0.405 Sum_probs=92.7
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++. +.+..+++|++|+|++|+|++. + .+..+++|+.|+|++|+|++. +. +..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 84 LTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLS 157 (308)
T ss_dssp CCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEE
T ss_pred CCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEE
Confidence 46788888888888853 3678888888888888888853 3 378888888888888888754 33 77788888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCccc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
|++|++++..+ +..+++|+.|++++|+|+++++ ...+++|+.|++++|...
T Consensus 158 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 158 IGNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCC
T ss_pred ccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccC
Confidence 88888875433 7777788888888887777655 556677777777777643
No 352
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=9.1e-15 Score=148.31 Aligned_cols=128 Identities=23% Similarity=0.240 Sum_probs=109.2
Q ss_pred CCcEEEEEcCCCCcccc--C--cccccCCCCCcEEEeeeCCCCCCCcc----cccCCCccceeeeccccCCCCCCccccc
Q 007020 64 DNSVIRVDLGNAALSGQ--L--VSQLGLLKNLQYLELYSNNITGPIPS----DLGNLTSLVSLDLYLNSFTGPIPDTLGK 135 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 135 (621)
..+|+.|+|++|++.+. + +..+..+++|++|+|++|+|+ .++. .+.++++|++|+|++|+|++..|..+..
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 46899999999998753 2 233578999999999999998 4443 3578999999999999999887888777
Q ss_pred c---cccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 136 L---SKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 136 l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++++. ...+++|+.|++++|+.
T Consensus 247 ~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 247 CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPF 306 (310)
T ss_dssp CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTT
T ss_pred ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch-hhhCCCccEEECcCCCC
Confidence 7 69999999999999 6787774 899999999999998744 57789999999999986
No 353
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.50 E-value=1.3e-14 Score=132.94 Aligned_cols=114 Identities=25% Similarity=0.169 Sum_probs=101.8
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCC-Ccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPI-PDTLGKLSKLRFL 142 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L 142 (621)
..+|+.|+|++|.|++. ..+..+++|++|+|++|+|++.+|..+.++++|++|+|++|+|++.. +..+..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 46899999999999976 88999999999999999999878888889999999999999999542 2789999999999
Q ss_pred cccccccCCCCC---CCccCCccccEEeeccCcCcccCCC
Q 007020 143 RLNNNSLSGPIP---MSLTNISSLQVLDLSNNRLSGVVPD 179 (621)
Q Consensus 143 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~~~ 179 (621)
+|++|.+++..+ ..+..+++|+.|++++|.+...+..
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcccc
Confidence 999999996544 4789999999999999999887654
No 354
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.50 E-value=1.8e-14 Score=158.19 Aligned_cols=132 Identities=19% Similarity=0.215 Sum_probs=114.3
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCC-CCcccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGP-IPDTLGKLSKLRFL 142 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 142 (621)
..+|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++. .|..|.++++|+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 46899999999999998889999999999999999999988888899999999999999999963 57789999999999
Q ss_pred cccccccCCCCC-CCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 143 RLNNNSLSGPIP-MSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 143 ~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
+|++|++.+.+| ..|..+++|+.|++++|++++..+.. ..+++|+.|++++|.
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc
Confidence 999999544554 68999999999999999999876654 556666666666554
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.50 E-value=4.3e-14 Score=143.15 Aligned_cols=124 Identities=27% Similarity=0.385 Sum_probs=102.0
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++..+ +..+++|++|+|++|+|++. + .+..+++|+.|+|++|+|++ ++. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 4578899999998886444 88899999999999998853 4 68889999999999999885 443 88889999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
|++|++++..+ +..+++|+.|++++|++++.++ ...+++|+.|++++|..
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCcc
Confidence 99999886543 8888899999999999988766 67788899999988864
No 356
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.49 E-value=1e-14 Score=159.07 Aligned_cols=127 Identities=21% Similarity=0.187 Sum_probs=114.8
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 58999999999999888899999999999999999999888999999999999999999999 57766 8999999999
Q ss_pred cccccCC-CCCCCccCCccccEEeeccCcCcccCCCCCCCCCc--ccccccCCcc
Q 007020 145 NNNSLSG-PIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLF--TPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l--~~l~l~~N~~ 196 (621)
++|++++ .+|..|..+++|++|++++|+|++. ....+++| +.|++++|..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS--SVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG--GGGGGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh--hccccccceeeEEEeecccc
Confidence 9999997 4788999999999999999999873 34556777 9999999875
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.49 E-value=3.6e-14 Score=140.21 Aligned_cols=124 Identities=27% Similarity=0.346 Sum_probs=107.9
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|+. ++ .+..+++|++|+|++|+|++..+ |.++++|+.|+|++|+|++ +|... . ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 3579999999999995 44 78999999999999999996554 9999999999999999995 55433 3 9999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCccc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
|++|+|++. + .+..+++|+.|++++|+|++++ ....+++|+.|++++|...
T Consensus 113 L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 113 LDNNELRDT-D-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCC
T ss_pred ccCCccCCC-h-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCc
Confidence 999999963 3 5899999999999999999885 4678899999999999754
No 358
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.49 E-value=1.6e-14 Score=155.91 Aligned_cols=125 Identities=26% Similarity=0.170 Sum_probs=87.5
Q ss_pred EEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccc-ccccccccccc
Q 007020 67 VIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLG-KLSKLRFLRLN 145 (621)
Q Consensus 67 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~ 145 (621)
|+.|+|++|.|++..+. .+++|++|+|++|.|++..|..|+++++|+.|+|++|.|++.+|..+. .+++|+.|+|+
T Consensus 101 L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls 177 (487)
T 3oja_A 101 IETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (487)
T ss_dssp CCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecC
Confidence 34444444444433322 356777788888888777777777788888888888888776676665 67888888888
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
+|.|++..+ +..+++|+.|+|++|+|+++++....+++|+.|++++|..
T Consensus 178 ~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l 226 (487)
T 3oja_A 178 YNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL 226 (487)
T ss_dssp TSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCC
T ss_pred CCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcC
Confidence 888775422 3357788888888888888777767777888888888764
No 359
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.49 E-value=2e-14 Score=148.29 Aligned_cols=110 Identities=25% Similarity=0.208 Sum_probs=96.1
Q ss_pred ccceeeEEcCCCcEEEEEcCCC-CccccCcccccCCCCCcEEEeee-CCCCCCCcccccCCCccceeeeccccCCCCCCc
Q 007020 54 CTWFHVTCNNDNSVIRVDLGNA-ALSGQLVSQLGLLKNLQYLELYS-NNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD 131 (621)
Q Consensus 54 c~w~gv~c~~~~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 131 (621)
|.|..|.| +++ +|+. +|. |..+++|++|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~-----------~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRC-----------TRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEEC-----------CSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEc-----------CCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 77765555 455 7884 677 99999999999996 999988889999999999999999999998899
Q ss_pred ccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccC
Q 007020 132 TLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVV 177 (621)
Q Consensus 132 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 177 (621)
.|.+|++|+.|+|++|+|++..+..|..++ |+.|+|++|+|....
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 999999999999999999976666676666 999999999998653
No 360
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.49 E-value=1.3e-14 Score=158.12 Aligned_cols=134 Identities=25% Similarity=0.334 Sum_probs=106.0
Q ss_pred CCCCCCCCCCCc-----cceee-EEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccc
Q 007020 43 LQSWDPTLVNPC-----TWFHV-TCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLV 116 (621)
Q Consensus 43 l~~w~~~~~~~c-----~w~gv-~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 116 (621)
+.+|... .++| .|.|+ .|.. ++|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~~-~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQ-ALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTT-CCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhcc-CCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 4456443 5677 79999 6763 579999999999996 66655 378999999999999 566 4578999
Q ss_pred eeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 117 SLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 117 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
.|+|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++++. .+++|+.|++++|..
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCC
Confidence 99999999996 676 655 89999999999986 565 57888889999998888665 567888888888864
No 361
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=3.2e-16 Score=148.01 Aligned_cols=128 Identities=23% Similarity=0.293 Sum_probs=102.0
Q ss_pred cEEEEEcCCCCccccCcc------cccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVS------QLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKL 139 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 139 (621)
+++.++|+.+.+++..|. .|..+++|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666666665555 88888999999999999885 56 8888899999999999988 678778888899
Q ss_pred ccccccccccCCCCCCCccCCccccEEeeccCcCcccCC--CCCCCCCcccccccCCcccC
Q 007020 140 RFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVP--DNGSFSLFTPISFANNLDLC 198 (621)
Q Consensus 140 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~~~~ 198 (621)
+.|+|++|+|++ +| .+..+++|+.|++++|+|++.+. ....+++|+.|++++|+..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 999999999885 45 57788889999999999887654 34678888999999887644
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.46 E-value=9.8e-14 Score=152.90 Aligned_cols=123 Identities=29% Similarity=0.395 Sum_probs=76.0
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++..+ +..+++|+.|+|++|+|++ +| .|..|++|+.|+|++|+|++ + +.+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 3466777777777765443 6666667777777766663 23 56666666666666666663 2 3356666666666
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 195 (621)
|++|+|++. ..+..+++|+.|+|++|+|++.++ ...+++|+.|+|++|.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCC
Confidence 666666643 455566666666666666666555 5555666666666664
No 363
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.46 E-value=4.7e-14 Score=145.33 Aligned_cols=122 Identities=25% Similarity=0.325 Sum_probs=56.1
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
+|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|.+++. +.+..+++|+.|+|+
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVG 273 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEcc
Confidence 44555555555543322 4444555555555555543222 44455555555555554432 234444555555555
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCc
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~ 195 (621)
+|++++. ..+..+++|+.|++++|++++..+.. ..+++|+.|++++|+
T Consensus 274 ~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 274 SNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred CCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 5544432 23444444555555555444443332 334444445554444
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.46 E-value=1e-13 Score=152.82 Aligned_cols=127 Identities=29% Similarity=0.305 Sum_probs=113.4
Q ss_pred CCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccc
Q 007020 63 NDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFL 142 (621)
Q Consensus 63 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (621)
...+|+.|+|++|.|++. +.+..+++|++|+|++|+|++. ..|..|++|+.|+|++|+|++. ..|..+++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 356899999999999963 3799999999999999999963 4699999999999999999965 679999999999
Q ss_pred cccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcccC
Q 007020 143 RLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLC 198 (621)
Q Consensus 143 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~~ 198 (621)
+|++|+|++..| +..+++|+.|+|++|+|+++ +....+++|+.|+|++|+...
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEEC
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcC
Confidence 999999997766 99999999999999999987 456789999999999998654
No 365
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.45 E-value=2.4e-14 Score=128.35 Aligned_cols=108 Identities=20% Similarity=0.227 Sum_probs=98.4
Q ss_pred CCCCCcEEEeeeCCCC-CCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccE
Q 007020 87 LLKNLQYLELYSNNIT-GPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQV 165 (621)
Q Consensus 87 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 165 (621)
..++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999999 78898999999999999999999965 77999999999999999999878888888999999
Q ss_pred EeeccCcCcccC--CCCCCCCCcccccccCCcc
Q 007020 166 LDLSNNRLSGVV--PDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 166 L~l~~N~l~~~~--~~~~~~~~l~~l~l~~N~~ 196 (621)
|++++|+|++.+ .....+++|+.|++++|+.
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 999999999865 5568899999999999975
No 366
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.44 E-value=4.3e-14 Score=143.82 Aligned_cols=126 Identities=27% Similarity=0.173 Sum_probs=88.0
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccc-ccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTL-GKLSKLRFLRL 144 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l 144 (621)
+|+.|+|++|.|++..+. .+++|++|+|++|+|++..+..|..+++|++|+|++|.|++..+..+ ..+++|+.|+|
T Consensus 100 ~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 344444444444433222 35677888888888887767777788888888888888886666655 36788888888
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|+|++. +. ...+++|+.|+|++|+|+++++....+++|+.|++++|..
T Consensus 177 ~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l 226 (317)
T 3o53_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL 226 (317)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCC
T ss_pred CCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcc
Confidence 88888744 32 3347788888888888888777767778888888888864
No 367
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.44 E-value=1.3e-13 Score=142.21 Aligned_cols=144 Identities=14% Similarity=0.141 Sum_probs=116.7
Q ss_pred CccceeeEEcCC----------CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCc-ccccCCCccce-eee
Q 007020 53 PCTWFHVTCNND----------NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIP-SDLGNLTSLVS-LDL 120 (621)
Q Consensus 53 ~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 120 (621)
-|+|..|.|+.. .+++.|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|.. +++
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 478888999642 478999999999997767789999999999999999876555 56899998775 677
Q ss_pred ccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeecc-CcCcccCCCC-CCC-CCcccccccCCcc
Q 007020 121 YLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSN-NRLSGVVPDN-GSF-SLFTPISFANNLD 196 (621)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~-~~~-~~l~~l~l~~N~~ 196 (621)
++|+|+...|+.|..+++|++|++++|+|++..+..+....++..|++.+ |++..+++.. ..+ ..++.|++++|..
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 78999977788999999999999999999977777777777888888865 6777776654 333 4577888888864
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.44 E-value=5.6e-14 Score=158.63 Aligned_cols=129 Identities=24% Similarity=0.316 Sum_probs=112.6
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|. .+|..+..+++|++|+|++|.|+ .+|..|.+|++|+.|+|++|+|+ .+|..|.+|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 468999999999999 67777889999999999999999 88999999999999999999999 7899999999999999
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCC-CC-CCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNG-SF-SLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~-~~l~~l~l~~N~~ 196 (621)
|++|.|+ .+|..|..|++|+.|+|++|+|++.++... .+ ..+..++|++|..
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l 353 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRP 353 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcc
Confidence 9999998 788889999999999999999998877542 11 1122356777754
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.41 E-value=3.2e-13 Score=145.06 Aligned_cols=123 Identities=29% Similarity=0.382 Sum_probs=75.0
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 466777777777765443 6666677777777776664433 6666666666666666664322 566666666666
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++++..| +..+++|+.|++++|++++. +....+++|+.|++++|+.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCcc
Confidence 6666665444 55566666666666666654 2334555666666665543
No 370
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=2.2e-13 Score=140.35 Aligned_cols=108 Identities=18% Similarity=0.114 Sum_probs=97.0
Q ss_pred cEEEeeeC-CCCCCCcccccCCCccceeeecc-ccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeec
Q 007020 92 QYLELYSN-NITGPIPSDLGNLTSLVSLDLYL-NSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLS 169 (621)
Q Consensus 92 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 169 (621)
..++++++ +|+ .+|. |..+++|+.|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688998 899 5777 99999999999996 99998877899999999999999999999889999999999999999
Q ss_pred cCcCcccCCCCCCCCCcccccccCCcccCCCC
Q 007020 170 NNRLSGVVPDNGSFSLFTPISFANNLDLCGPV 201 (621)
Q Consensus 170 ~N~l~~~~~~~~~~~~l~~l~l~~N~~~~~~~ 201 (621)
+|+|+++++.......|+.|+|.+|++.|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 99999999877444449999999999998754
No 371
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=7.6e-14 Score=128.95 Aligned_cols=108 Identities=21% Similarity=0.263 Sum_probs=96.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCc--ccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPD--TLGKLSKLRFL 142 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L 142 (621)
.+|+.|+|++|.|++. +.|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 3799999999999975 78999999999999999999766666799999999999999997 6676 79999999999
Q ss_pred cccccccCCCCCCC----ccCCccccEEeeccCcCccc
Q 007020 143 RLNNNSLSGPIPMS----LTNISSLQVLDLSNNRLSGV 176 (621)
Q Consensus 143 ~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~~ 176 (621)
+|++|.++ .+|.. +..+++|+.|++++|.+...
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 99999998 56664 88999999999999988654
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.39 E-value=3.6e-13 Score=146.82 Aligned_cols=99 Identities=29% Similarity=0.355 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 4577888888888876 555 554 77777777777775 444 46666677777776664 444 355666666
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCC
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVP 178 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 178 (621)
|++|+|++ +|. |. ++|+.|+|++|+|+.++.
T Consensus 167 Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~ 197 (571)
T 3cvr_A 167 VRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA 197 (571)
T ss_dssp CCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC
T ss_pred CCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh
Confidence 66666664 444 43 555556666555554444
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.37 E-value=6.7e-13 Score=142.53 Aligned_cols=125 Identities=31% Similarity=0.397 Sum_probs=98.5
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.+++. +.+..+++|++|+|++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 35788888888888853 467788888888888888886544 8888888888888888885433 77888888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCccc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 197 (621)
|++|++++..+ +..+++|+.|++++|++++.++ ...+++|+.|++++|+..
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccC
Confidence 88888886544 7788888888888888888766 567788888888888653
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.37 E-value=5.3e-14 Score=154.08 Aligned_cols=103 Identities=26% Similarity=0.341 Sum_probs=94.9
Q ss_pred CCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeec
Q 007020 90 NLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLS 169 (621)
Q Consensus 90 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 169 (621)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58999999999995 676 999999999999999999 889999999999999999999996 67 89999999999999
Q ss_pred cCcCccc--CCCCCCCCCcccccccCCccc
Q 007020 170 NNRLSGV--VPDNGSFSLFTPISFANNLDL 197 (621)
Q Consensus 170 ~N~l~~~--~~~~~~~~~l~~l~l~~N~~~ 197 (621)
+|+|++. +.....+++|+.|+|++|+..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 9999999 455588999999999999853
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.37 E-value=4.1e-15 Score=140.41 Aligned_cols=125 Identities=20% Similarity=0.192 Sum_probs=108.1
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++ +| .+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 4689999999999997 56 8999999999999999999 678888889999999999999995 55 689999999999
Q ss_pred ccccccCCCCC-CCccCCccccEEeeccCcCcccCCC-----------CCCCCCcccccccCCc
Q 007020 144 LNNNSLSGPIP-MSLTNISSLQVLDLSNNRLSGVVPD-----------NGSFSLFTPISFANNL 195 (621)
Q Consensus 144 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~-----------~~~~~~l~~l~l~~N~ 195 (621)
|++|+|++..+ ..+..+++|+.|++++|++++.++. ...+++|+.|+ +|+
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~ 183 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMP 183 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGG
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--Ccc
Confidence 99999995332 4788999999999999999888665 35677888775 554
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.35 E-value=2.1e-12 Score=137.95 Aligned_cols=120 Identities=23% Similarity=0.245 Sum_probs=91.1
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
..+|+.|+|++|.|++. | .+..+++|++|+|++|+|++. | ++.+++|++|+|++|+|++. + ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 35678888888888864 3 678888888888888888854 3 77888888888888888854 3 77888888888
Q ss_pred ccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 144 LNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 144 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
|++|++++ +| +..+++|+.|++++|+|++++ ...+++|+.|++++|..
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~--l~~l~~L~~L~l~~n~~ 160 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEID--VSHNTQLTELDCHLNKK 160 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCCC--CTTCTTCCEEECTTCSC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccceec--cccCCcCCEEECCCCCc
Confidence 88888885 34 777888888888888888752 55677777777777753
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.34 E-value=9.6e-13 Score=135.49 Aligned_cols=123 Identities=25% Similarity=0.394 Sum_probs=80.6
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++. +. +..+++|+.|+|
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEEC
Confidence 467777777777764332 6667777777777777774433 66677777777777777643 33 667777777777
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|.+++. ..+..+++|+.|++++|+++++ +....+++|+.|++++|+.
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcC
Confidence 77777643 3466677777777777777665 2345566777777777654
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.31 E-value=6e-13 Score=146.81 Aligned_cols=135 Identities=21% Similarity=0.217 Sum_probs=89.5
Q ss_pred CCCCCCCCCCCccceeeEE------cC-CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCcc
Q 007020 43 LQSWDPTLVNPCTWFHVTC------NN-DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSL 115 (621)
Q Consensus 43 l~~w~~~~~~~c~w~gv~c------~~-~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 115 (621)
.++|... .+||.|.|..| .+ .++++.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|
T Consensus 12 w~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL 83 (622)
T ss_dssp HHHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC
T ss_pred HHHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC
Confidence 3445432 46777766332 11 134777888888887 5566554 67888888888887 4554 46778
Q ss_pred ceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCc
Q 007020 116 VSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 116 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 195 (621)
++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|+|++++.. +++|+.|++++|.
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSC
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCCc
Confidence 88888888877 4554 56777788888887774 444 456777777777777776553 3667777777775
Q ss_pred c
Q 007020 196 D 196 (621)
Q Consensus 196 ~ 196 (621)
.
T Consensus 153 l 153 (622)
T 3g06_A 153 L 153 (622)
T ss_dssp C
T ss_pred C
Confidence 3
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.30 E-value=6.3e-12 Score=134.26 Aligned_cols=128 Identities=16% Similarity=0.147 Sum_probs=85.9
Q ss_pred ceeeEEcCCCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccc
Q 007020 56 WFHVTCNNDNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGK 135 (621)
Q Consensus 56 w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 135 (621)
..++......+|+.|+|++|.|++. + +..+++|++|+|++|+|++. + ++++++|++|+|++|+..+.+ .+..
T Consensus 97 l~~~~~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~ 168 (457)
T 3bz5_A 97 LTNLDVTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTP 168 (457)
T ss_dssp CSCCCCTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTT
T ss_pred CceeecCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--cccc
Confidence 3444434456889999999999864 3 88888999999999988864 3 667777777777777544444 3566
Q ss_pred ccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 136 LSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 136 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
+++|+.|+|++|++++ +| +..+++|+.|++++|+|+++ ....+++|+.|++++|..
T Consensus 169 l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCC
T ss_pred CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcc
Confidence 6777777777777664 33 55666666666666666655 244556666666666653
No 380
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=1.5e-11 Score=121.28 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=112.5
Q ss_pred hcCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CCceeeeeeeeecCCceEEEEe
Q 007020 295 TDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYP 373 (621)
Q Consensus 295 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 373 (621)
-+.|.....++.|+.+.||++... ++.+++|+...... .....+.+|+.+++.+. +..+.++++++...+..++|||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 356877788888999999999864 68899999864321 12235889999998885 6678889999888888999999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC------------------------------------ 417 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 417 (621)
|++|.+|.+.+.. ......++.+++++|+.||+..
T Consensus 91 ~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 91 EADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp CCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred ecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999876321 1134578889999999999810
Q ss_pred --------------------CCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 418 --------------------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 418 --------------------~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
.+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13689999999999998766667999998754
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.25 E-value=9.2e-12 Score=137.39 Aligned_cols=52 Identities=31% Similarity=0.288 Sum_probs=23.8
Q ss_pred cccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCc
Q 007020 137 SKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 137 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 195 (621)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++++. .+++|+.|++++|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQ 272 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCC
Confidence 445555555555553 33 223444555555555444333 23344444444443
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.25 E-value=1.5e-13 Score=143.82 Aligned_cols=131 Identities=22% Similarity=0.237 Sum_probs=71.5
Q ss_pred CcEEEEEcCCCCcc-ccCc---ccccCCCCCcEEEeeeCCCC--C---CCcccccCCCccceeeeccccCC----CCCCc
Q 007020 65 NSVIRVDLGNAALS-GQLV---SQLGLLKNLQYLELYSNNIT--G---PIPSDLGNLTSLVSLDLYLNSFT----GPIPD 131 (621)
Q Consensus 65 ~~l~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~ 131 (621)
.+|+.|+|++|+|+ +.++ ..+..+++|++|+|++|+|+ + ..+..+.++++|+.|+|++|.|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 35555666666554 2222 34455566666666666665 1 23335556666666666666663 34555
Q ss_pred ccccccccccccccccccCCC----CCCCcc--CCccccEEeeccCcCcc-----cCCCC-CCCCCcccccccCCc
Q 007020 132 TLGKLSKLRFLRLNNNSLSGP----IPMSLT--NISSLQVLDLSNNRLSG-----VVPDN-GSFSLFTPISFANNL 195 (621)
Q Consensus 132 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~--~l~~L~~L~l~~N~l~~-----~~~~~-~~~~~l~~l~l~~N~ 195 (621)
.+..+++|+.|+|++|.|++. ++..+. .+++|+.|+|++|.|++ ++... ..+++|+.|++++|+
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 556666666666666666543 333442 25666666666666665 33322 335566666666664
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.24 E-value=1.7e-11 Score=130.78 Aligned_cols=117 Identities=26% Similarity=0.344 Sum_probs=70.8
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|++++. +.. .++|++|+|++|++++ +| .|.++++|++|+|++|+|++ +|..+ ++|+.|+|
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 3556666666665532 111 1567777777777774 55 47777777777777777774 45432 46677777
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++++ +| .+..+++|+.|++++|++++++... ++|+.|++++|..
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l 227 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNIL 227 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcC
Confidence 7777764 44 4666677777777777666644321 3566666666643
No 384
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.24 E-value=9.1e-12 Score=128.37 Aligned_cols=125 Identities=17% Similarity=0.144 Sum_probs=104.9
Q ss_pred EEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCC-ccccccccccc-ccccc
Q 007020 69 RVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIP-DTLGKLSKLRF-LRLNN 146 (621)
Q Consensus 69 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~l~~ 146 (621)
.++.++++|+ .+|..+ .++|++|+|++|+|+.+.+..|.+|++|++|+|++|+|.+.+| ..|.++++|.. +++++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 5889999999 567666 3789999999999996666789999999999999999976665 56889998875 67778
Q ss_pred cccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 147 NSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
|+|+...|..|..+++|+.|++++|+|++.++.. ....++..+++.+|..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~ 140 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 140 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTT
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccc
Confidence 9999888899999999999999999999887755 4555677788876543
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.24 E-value=1.6e-13 Score=140.56 Aligned_cols=130 Identities=22% Similarity=0.166 Sum_probs=86.9
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCC-CcccccCCCccceeeeccccCCCCCCccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGP-IPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLR 143 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (621)
.+++.|+|++|.+++..+. +..+++|++|+|++|.+++. ++..+.++++|++|+|++|++++..+..+..+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777755444 44677777777777777654 666677777777777777777766666677777777777
Q ss_pred cccc-ccCCC-CCCCccCCccccEEeeccC-cCccc--CCCCCCCC-CcccccccCCc
Q 007020 144 LNNN-SLSGP-IPMSLTNISSLQVLDLSNN-RLSGV--VPDNGSFS-LFTPISFANNL 195 (621)
Q Consensus 144 l~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~--~~~~~~~~-~l~~l~l~~N~ 195 (621)
|++| .+++. ++..+..+++|+.|++++| .+++. +.....++ +|+.|++++|.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 7777 56532 4555666777777777777 76642 22234566 77777777764
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.23 E-value=4.8e-13 Score=138.68 Aligned_cols=132 Identities=20% Similarity=0.193 Sum_probs=90.2
Q ss_pred CcEEEEEcCCCCccccCc----ccccCCC-CCcEEEeeeCCCCCCCcccccCC-----CccceeeeccccCCCCCCcccc
Q 007020 65 NSVIRVDLGNAALSGQLV----SQLGLLK-NLQYLELYSNNITGPIPSDLGNL-----TSLVSLDLYLNSFTGPIPDTLG 134 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~ 134 (621)
.+|+.|||++|.|++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|++|+|++|+|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 357888888888876666 6677777 78888888888887666666664 7888888888888766555444
Q ss_pred cc-----cccccccccccccCCCCCCCcc----C-CccccEEeeccCcCcccCCCC-----CCCC-CcccccccCCcc
Q 007020 135 KL-----SKLRFLRLNNNSLSGPIPMSLT----N-ISSLQVLDLSNNRLSGVVPDN-----GSFS-LFTPISFANNLD 196 (621)
Q Consensus 135 ~l-----~~L~~L~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~~~~-----~~~~-~l~~l~l~~N~~ 196 (621)
.. ++|+.|+|++|+|++..+..+. . .++|++|+|++|+|++..... ..++ +|+.|++++|..
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 43 7788888888888755444332 2 257888888888877432211 2233 777888887753
No 387
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.22 E-value=3e-13 Score=138.63 Aligned_cols=133 Identities=22% Similarity=0.279 Sum_probs=96.9
Q ss_pred CCcEEEEEcCCCCcccc-CcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccc-cCCCC-CCcccccccccc
Q 007020 64 DNSVIRVDLGNAALSGQ-LVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLN-SFTGP-IPDTLGKLSKLR 140 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~ 140 (621)
..+|+.|+|++|.+++. ++..+..+++|++|+|++|++++..+..|.++++|++|+|++| .+++. ++..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 35788888888888765 7777888888888888888888777778888888888888888 56642 556677788888
Q ss_pred ccccccc-ccCCC-CCCCccCCc-cccEEeeccCc--Cc--ccCCCCCCCCCcccccccCCcc
Q 007020 141 FLRLNNN-SLSGP-IPMSLTNIS-SLQVLDLSNNR--LS--GVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 141 ~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N~--l~--~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
.|+|++| .+++. ++..+..++ +|+.|++++|. ++ +++.....+++|+.|++++|..
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 8888888 77743 455566777 78888888773 43 2222234567777777777763
No 388
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.22 E-value=3.2e-11 Score=118.60 Aligned_cols=129 Identities=14% Similarity=0.047 Sum_probs=98.2
Q ss_pred eeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCc--eeeeeeeeecCCceEEEEeccCCCchhh
Q 007020 305 GRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN--LLRLRGFCMTPTERLLVYPYMANGSVAS 382 (621)
Q Consensus 305 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~ 382 (621)
+.|..+.||++...+|+.+++|+.... ....+..|+.+++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 455669999998777888999997543 1235788999998886545 456888888777889999999998884
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 007020 383 CLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC--------------------------------------------- 417 (621)
Q Consensus 383 ~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------------- 417 (621)
... . ....++.++++.|..||+..
T Consensus 104 -~~~-------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 -SSH-------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp -TSC-------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred -cCc-------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 221 1 12367788888888888752
Q ss_pred ----------CCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 418 ----------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 418 ----------~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
.+.++|+|++|.||++++++.+.|+|||.+..
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998876677999998764
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.21 E-value=3.4e-13 Score=141.10 Aligned_cols=131 Identities=21% Similarity=0.271 Sum_probs=64.1
Q ss_pred CcEEEEEcCCCCccc----cCcccccCCCCCcEEEeeeCCCCCCCccccc----CC---------CccceeeeccccCC-
Q 007020 65 NSVIRVDLGNAALSG----QLVSQLGLLKNLQYLELYSNNITGPIPSDLG----NL---------TSLVSLDLYLNSFT- 126 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~- 126 (621)
.+|+.|+|++|.|++ .++..+..+++|++|+|++|.|++..+..+. .+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 455555555555554 2444555555555555555555432222222 22 55555555555554
Q ss_pred CCCC---cccccccccccccccccccC--C---CCCCCccCCccccEEeeccCcCc-----ccCCCCCCCCCcccccccC
Q 007020 127 GPIP---DTLGKLSKLRFLRLNNNSLS--G---PIPMSLTNISSLQVLDLSNNRLS-----GVVPDNGSFSLFTPISFAN 193 (621)
Q Consensus 127 ~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~-----~~~~~~~~~~~l~~l~l~~ 193 (621)
+.++ ..+..+++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.|+ .++.....+++|+.|+|++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 2222 23445555555555555554 1 22334555555555555555553 1222224445555555555
Q ss_pred Cc
Q 007020 194 NL 195 (621)
Q Consensus 194 N~ 195 (621)
|.
T Consensus 254 n~ 255 (386)
T 2ca6_A 254 CL 255 (386)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 390
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.17 E-value=5.7e-11 Score=126.75 Aligned_cols=117 Identities=23% Similarity=0.261 Sum_probs=96.8
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.|+|++|.+++ +|.. +++|++|+|++|++++ +|.. .++|++|+|++|+|++ +| .|.++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 578999999999997 5543 4889999999999985 3321 2689999999999995 77 5999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCCcc
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLD 196 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~ 196 (621)
++|++++ +|..+ ++|++|++++|++++++ ....+++|+.|++++|..
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l 207 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSL 207 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCC
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcC
Confidence 9999995 66543 58999999999999865 678899999999999864
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.16 E-value=2e-12 Score=134.07 Aligned_cols=128 Identities=23% Similarity=0.183 Sum_probs=109.6
Q ss_pred EEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCc----ccccCCC-ccceeeeccccCCCCCCcccccc-----cc
Q 007020 69 RVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIP----SDLGNLT-SLVSLDLYLNSFTGPIPDTLGKL-----SK 138 (621)
Q Consensus 69 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 138 (621)
.++|++|++++.+|..+...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999999888888889999999999997777 7888999 99999999999998878888876 99
Q ss_pred cccccccccccCCCCCCCcc----CC-ccccEEeeccCcCcccCCCC-----CC-CCCcccccccCCcc
Q 007020 139 LRFLRLNNNSLSGPIPMSLT----NI-SSLQVLDLSNNRLSGVVPDN-----GS-FSLFTPISFANNLD 196 (621)
Q Consensus 139 L~~L~l~~N~l~~~~p~~~~----~l-~~L~~L~l~~N~l~~~~~~~-----~~-~~~l~~l~l~~N~~ 196 (621)
|+.|+|++|++++..+..+. .+ ++|+.|+|++|+|++..... .. .++|+.|++++|..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 99999999999976665443 44 89999999999998876532 22 25899999999964
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.13 E-value=2.6e-10 Score=117.86 Aligned_cols=142 Identities=12% Similarity=0.146 Sum_probs=106.0
Q ss_pred CceeeeccCceEEEEEcCCCcEEEEEEec--ccCCchhHHHHHHHHHHHHhcc--CCceeeeeeeeecC---CceEEEEe
Q 007020 301 KNILGRGGFGKVYKGRLADGSLVAVKRLK--EERTPGGELQFQTEVEMISMAV--HRNLLRLRGFCMTP---TERLLVYP 373 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e 373 (621)
.+.|+.|.++.||+.... +..+++|+.. ..........+.+|..+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456899999999999875 4678888875 3322223346888999999887 45578888888766 45799999
Q ss_pred ccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 007020 374 YMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC------------------------------------ 417 (621)
Q Consensus 374 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 417 (621)
|++|..+.+... ..++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999988754221 12667788899999999999999731
Q ss_pred -------------------CCCeEecCCCCCCeeeCCCCc--EEEccccccee
Q 007020 418 -------------------DPKIIHRDVKAANILLDEEFE--AVVGDFGLAKL 449 (621)
Q Consensus 418 -------------------~~~ivH~Dlk~~Nill~~~~~--~kl~DfGla~~ 449 (621)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999875
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.02 E-value=3e-10 Score=114.52 Aligned_cols=186 Identities=19% Similarity=0.193 Sum_probs=121.7
Q ss_pred CceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CCc--eeeeeeeeecCC---ceEEEEec
Q 007020 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRN--LLRLRGFCMTPT---ERLLVYPY 374 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~ 374 (621)
.+.++.|....||+.. ..+++|+.... .....+.+|..+++.+. +.. +.+++......+ ..|+|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3568999999999874 45889986432 33457889999998874 322 334444433332 34889999
Q ss_pred cCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 007020 375 MANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH-------------------------------------- 416 (621)
Q Consensus 375 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 416 (621)
++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999888754322 156677788888888888888861
Q ss_pred -----------------CCCCeEecCCCCCCeeeCC--CCcEEEcccccceecccCCCeee--e-----------ccccc
Q 007020 417 -----------------CDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMDYKDTHVT--T-----------AVRGT 464 (621)
Q Consensus 417 -----------------~~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~~~~~~~~~~--~-----------~~~gt 464 (621)
..+.++|+|+++.||+++. +..+.|+||+.+...+....... . .....
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1246899999999999998 55688999999876432100000 0 00000
Q ss_pred ccccc-hhhhccCCCCCcccchhHHHHHHHHHhCCCCc
Q 007020 465 IGHIA-PEYLSTGKSSEKTDVFGYGIMLLELITGQRAF 501 (621)
Q Consensus 465 ~~y~a-PE~~~~~~~~~~~DvwSlGvil~elltg~~pf 501 (621)
.++.. |+..... ..-.+.|++|.++|++.+|..+|
T Consensus 252 Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 11112 2222111 11258999999999999999876
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.01 E-value=2.8e-12 Score=137.41 Aligned_cols=111 Identities=24% Similarity=0.204 Sum_probs=57.2
Q ss_pred CcEEEEEcCCCCccccC-----cccccCCCCCcEEEeeeCCCCCC----CcccccCCCccceeeeccccCCCCCCccccc
Q 007020 65 NSVIRVDLGNAALSGQL-----VSQLGLLKNLQYLELYSNNITGP----IPSDLGNLTSLVSLDLYLNSFTGPIPDTLGK 135 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 135 (621)
.+|+.|+|++|.|++.. +..+..+++|++|+|++|+|++. ++..+.++++|+.|+|++|.|++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 45666666666665432 22223456666666666666632 4455555666666666666655332222222
Q ss_pred c-----cccccccccccccCCC----CCCCccCCccccEEeeccCcCcc
Q 007020 136 L-----SKLRFLRLNNNSLSGP----IPMSLTNISSLQVLDLSNNRLSG 175 (621)
Q Consensus 136 l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 175 (621)
. ++|+.|+|++|.+++. ++..+..+++|+.|++++|+|++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 1 4555555555555532 23334444555555555555544
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.92 E-value=2.5e-11 Score=129.89 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=71.9
Q ss_pred CCcEEEEEcCCCCccccCccccc-----CCCCCcEEEeeeCCCCCC----CcccccCCCccceeeeccccCCCCCCcccc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLG-----LLKNLQYLELYSNNITGP----IPSDLGNLTSLVSLDLYLNSFTGPIPDTLG 134 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 134 (621)
..+|+.|+|++|.|++..+..+. ..++|++|+|++|++++. ++..+..+++|+.|+|++|.+++..+..+.
T Consensus 112 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 191 (461)
T 1z7x_W 112 LPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLC 191 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHH
Confidence 34677777777776644333222 245677777777766643 244455566666666666666533222222
Q ss_pred c-----ccccccccccccccCCC----CCCCccCCccccEEeeccCcCcccC-----CC-CCCCCCcccccccCCc
Q 007020 135 K-----LSKLRFLRLNNNSLSGP----IPMSLTNISSLQVLDLSNNRLSGVV-----PD-NGSFSLFTPISFANNL 195 (621)
Q Consensus 135 ~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~-----~~-~~~~~~l~~l~l~~N~ 195 (621)
. +++|+.|+|++|.+++. ++..+..+++|+.|++++|++++.. +. ...+++|+.|++++|.
T Consensus 192 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~ 267 (461)
T 1z7x_W 192 QGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG 267 (461)
T ss_dssp HHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCC
Confidence 1 34666666666666642 3444555566666666666655431 11 1234555666666553
No 396
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=8.8e-10 Score=112.38 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=26.3
Q ss_pred ccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcc-cccccC
Q 007020 136 LSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFT-PISFAN 193 (621)
Q Consensus 136 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~-~l~l~~ 193 (621)
+++|+.|+|++|+++.+.+..|.+|++|+.|++.+| ++.+.... ..+.+|+ .+.+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 344455555555444333344445555555555444 44444333 3444444 444444
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.90 E-value=1.9e-11 Score=126.69 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=99.5
Q ss_pred CcEEEEEcCCCCccccCcccc-cCCCCCcEEEeeeCCCCCCCcccc-----cCCCccceeeeccccCCCC----CCcccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQL-GLLKNLQYLELYSNNITGPIPSDL-----GNLTSLVSLDLYLNSFTGP----IPDTLG 134 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p~~~~ 134 (621)
.+|+.|+|++|.|+......+ ..+++|++|+|++|+|+......+ ...++|+.|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433333 346789999999999985444444 3568899999999998742 344557
Q ss_pred cccccccccccccccCCC----CCCCccCCccccEEeeccCcCcccCCC-----CCCCCCcccccccCCcc
Q 007020 135 KLSKLRFLRLNNNSLSGP----IPMSLTNISSLQVLDLSNNRLSGVVPD-----NGSFSLFTPISFANNLD 196 (621)
Q Consensus 135 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~-----~~~~~~l~~l~l~~N~~ 196 (621)
.+++|++|+|++|.|.+. ++..+...++|+.|+|++|.|+..... ....++|+.|+|++|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 789999999999998742 245567778999999999999864321 13457899999999963
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=1.9e-09 Score=109.97 Aligned_cols=130 Identities=16% Similarity=0.135 Sum_probs=105.5
Q ss_pred CCcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCccccc---------------------------------
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLG--------------------------------- 110 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--------------------------------- 110 (621)
..+|+.|+|.+ +++.+.+.+|.++++|+.|+|++|.++.+.+..|.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 45788999998 88877778899999999999999986422222111
Q ss_pred ---------------------------------------------CCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 111 ---------------------------------------------NLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 111 ---------------------------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
.+++|+.|+|++|+++.+.+..|.++++|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 26789999999999996666789999999999999
Q ss_pred ccccCCCCCCCccCCcccc-EEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 146 NNSLSGPIPMSLTNISSLQ-VLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+| ++.+.+..|.+|++|+ .|++.+ .++.+.+.. ..+++|+.+++++|..
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 98 7767778899999999 999998 788887665 7789999999987754
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.77 E-value=9.3e-11 Score=114.44 Aligned_cols=67 Identities=28% Similarity=0.377 Sum_probs=46.0
Q ss_pred cCCCccceeeeccccCCC--CCCcccccccccccccccccccCCCCCCCccCCc--cccEEeeccCcCcccCC
Q 007020 110 GNLTSLVSLDLYLNSFTG--PIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNIS--SLQVLDLSNNRLSGVVP 178 (621)
Q Consensus 110 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~ 178 (621)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++..+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 457778888888888876 3345666778888888888888754 2334444 77788888888776443
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.71 E-value=6.2e-10 Score=115.24 Aligned_cols=112 Identities=21% Similarity=0.219 Sum_probs=89.6
Q ss_pred CcEEEEEcCCCCccccCcccc-----cCCCCCcEEEeeeCCCCCC----CcccccCCCccceeeeccccCCCC----CCc
Q 007020 65 NSVIRVDLGNAALSGQLVSQL-----GLLKNLQYLELYSNNITGP----IPSDLGNLTSLVSLDLYLNSFTGP----IPD 131 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~ 131 (621)
.+|+.|+|++|.|+......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 379999999999986544444 3568999999999999842 445567899999999999999843 245
Q ss_pred ccccccccccccccccccCCC----CCCCccCCccccEEeeccCcCccc
Q 007020 132 TLGKLSKLRFLRLNNNSLSGP----IPMSLTNISSLQVLDLSNNRLSGV 176 (621)
Q Consensus 132 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 176 (621)
.+...++|+.|+|++|.|++. ++..+...++|++|+|++|.|+..
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 677889999999999999843 333455678999999999999764
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.64 E-value=1.7e-07 Score=94.88 Aligned_cols=137 Identities=18% Similarity=0.184 Sum_probs=100.7
Q ss_pred CCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccC----CceeeeeeeeecCCceEEEE
Q 007020 297 SFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVH----RNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 297 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~ 372 (621)
.+...+.++.|....||+. |+.+++|+... ......+.+|..++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~---~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR---DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc---HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4556678999999999998 56688897642 2223468899998888865 123444444 5678999
Q ss_pred eccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 007020 373 PYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHC----------------------------------- 417 (621)
Q Consensus 373 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 417 (621)
||++|.++.+.... .++..+...++.++++.++.||+..
T Consensus 107 e~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999888743321 1556667788888888888888542
Q ss_pred -------------------------CCCeEecCCCCCCeeeCCCCcEEEcccccceec
Q 007020 418 -------------------------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 450 (621)
Q Consensus 418 -------------------------~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 450 (621)
.+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999998753
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.63 E-value=3e-09 Score=103.80 Aligned_cols=80 Identities=26% Similarity=0.255 Sum_probs=65.9
Q ss_pred cCCCCCcEEEeeeCCCCC--CCcccccCCCccceeeeccccCCCCCCccccccc--ccccccccccccCCCCCC------
Q 007020 86 GLLKNLQYLELYSNNITG--PIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLS--KLRFLRLNNNSLSGPIPM------ 155 (621)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 155 (621)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999997 3456778999999999999999965 4455565 999999999999976663
Q ss_pred -CccCCccccEEe
Q 007020 156 -SLTNISSLQVLD 167 (621)
Q Consensus 156 -~~~~l~~L~~L~ 167 (621)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356778888776
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.57 E-value=8.7e-09 Score=113.79 Aligned_cols=84 Identities=15% Similarity=-0.047 Sum_probs=37.9
Q ss_pred CCCccceeeeccccCCCCCCcccccccccccccccccccC---CCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcc
Q 007020 111 NLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLS---GPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFT 187 (621)
Q Consensus 111 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~ 187 (621)
++++|+.|+|++|.+.+ +|..+..+++|+.|+++++... +..+..+..+++|+.|+++++.....+.....+++|+
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIR 296 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCc
Confidence 34444444444444442 3333444444444444432111 1222334444555555555543333333334556677
Q ss_pred cccccCCc
Q 007020 188 PISFANNL 195 (621)
Q Consensus 188 ~l~l~~N~ 195 (621)
.|++++|.
T Consensus 297 ~L~Ls~~~ 304 (592)
T 3ogk_B 297 KLDLLYAL 304 (592)
T ss_dssp EEEETTCC
T ss_pred EEecCCCc
Confidence 77777665
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.56 E-value=1.2e-09 Score=120.78 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=76.1
Q ss_pred CcEEEEEcCCCCccccCcccccC-CCCCcEEEee----eCCCCCC-----CcccccCCCccceeeeccc--cCCCCCCcc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGL-LKNLQYLELY----SNNITGP-----IPSDLGNLTSLVSLDLYLN--SFTGPIPDT 132 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~p~~ 132 (621)
.+|+.|+|+.|++++..+..+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|+++ .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 34556666556665544444444 6666666664 4555542 2223455666666666532 244333333
Q ss_pred cc-cccccccccccccccCC-CCCCCccCCccccEEeeccCcCcccCC-C-CCCCCCcccccccCCc
Q 007020 133 LG-KLSKLRFLRLNNNSLSG-PIPMSLTNISSLQVLDLSNNRLSGVVP-D-NGSFSLFTPISFANNL 195 (621)
Q Consensus 133 ~~-~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~~~~l~~l~l~~N~ 195 (621)
+. .+++|+.|+|++|++++ .++..+..+++|+.|++++|.|++... . ...+++|+.|++++|+
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 33 36777777777777764 233445667788888888887754311 1 2456778888888876
No 405
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=5.6e-07 Score=89.44 Aligned_cols=142 Identities=23% Similarity=0.271 Sum_probs=92.8
Q ss_pred cCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCC---ceeeeeeeeecCCceEEEEeccC
Q 007020 300 NKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR---NLLRLRGFCMTPTERLLVYPYMA 376 (621)
Q Consensus 300 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 376 (621)
..+.|+.|.++.||++...+|+.++||+..... ......+..|.+.++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 356799999999999998889999999965322 22234689999999999865 477777763 4689999999
Q ss_pred CCchhh-----------hhccCCCCCC-----------------CCCHHHHH---H-----------------HHHHHHH
Q 007020 377 NGSVAS-----------CLRERPPSQL-----------------PLDWPTRK---R-----------------IALGSAR 408 (621)
Q Consensus 377 ~gsL~~-----------~l~~~~~~~~-----------------~~~~~~~~---~-----------------i~~~i~~ 408 (621)
++++.. .+|....... .-+|.... + ....+-+
T Consensus 94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~ 173 (288)
T 3d1u_A 94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK 173 (288)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 986531 1333211100 01233211 0 0111112
Q ss_pred HHHHHH----hCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 409 GLSYLH----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 409 ~L~~LH----~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
.++.|. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 222232 2235689999999999999884 5889999 665
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=5.4e-09 Score=96.91 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=68.3
Q ss_pred CCcEEEEEcCCC-Ccccc----CcccccCCCCCcEEEeeeCCCCCC----CcccccCCCccceeeeccccCCCC----CC
Q 007020 64 DNSVIRVDLGNA-ALSGQ----LVSQLGLLKNLQYLELYSNNITGP----IPSDLGNLTSLVSLDLYLNSFTGP----IP 130 (621)
Q Consensus 64 ~~~l~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 130 (621)
..+|+.|+|++| .|... +...+...++|++|+|++|+|+.. +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 346777777777 77632 344556667777777777777632 333455556777777777777632 23
Q ss_pred cccccccccccccc--cccccCCC----CCCCccCCccccEEeeccCcCc
Q 007020 131 DTLGKLSKLRFLRL--NNNSLSGP----IPMSLTNISSLQVLDLSNNRLS 174 (621)
Q Consensus 131 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 174 (621)
..+...++|+.|+| ++|.|... +...+...++|+.|+|++|.|.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 44556667777777 66776632 2223344466777777666654
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.47 E-value=1.3e-06 Score=85.95 Aligned_cols=135 Identities=20% Similarity=0.183 Sum_probs=98.0
Q ss_pred eeeeccCc-eEEEEEcC-CCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-CCceeeeeeeeecCCceEEEEeccCCCc
Q 007020 303 ILGRGGFG-KVYKGRLA-DGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPYMANGS 379 (621)
Q Consensus 303 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 379 (621)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...++.+. +--+-++++++.+.+..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45666666 69988765 466799998643 23446788999888774 3336678888888889999999999988
Q ss_pred hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 007020 380 VASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH------------------------------------------- 416 (621)
Q Consensus 380 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~------------------------------------------- 416 (621)
+.+...... .....+..+++..|..||+.
T Consensus 107 ~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 877654321 23345666777777777742
Q ss_pred ------------CCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 417 ------------CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 417 ------------~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
..+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112488999999999999887778999998864
No 408
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=1.9e-06 Score=86.55 Aligned_cols=136 Identities=18% Similarity=0.174 Sum_probs=94.3
Q ss_pred CceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCC---ceeeeeeeee-cCCceEEEEeccC
Q 007020 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHR---NLLRLRGFCM-TPTERLLVYPYMA 376 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~ 376 (621)
.+.++.|....||+. |..+++|+.. .......+..|..+++.+.+. .+.+++.+.. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 356888888999988 4668888853 223455789999999988753 2455666653 4456789999999
Q ss_pred CCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 007020 377 NGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDH---------------------------------------- 416 (621)
Q Consensus 377 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~---------------------------------------- 416 (621)
|.++.+..-.. ++......++.++++.|+.||+.
T Consensus 97 G~~l~~~~~~~------l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 97 GQILGEDGMAV------LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp SEECHHHHHTT------SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CeECchhhhhh------CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 98887632111 33445555555565555555542
Q ss_pred -----------------CCCCeEecCCCCCCeeeCC---CCc-EEEccccccee
Q 007020 417 -----------------CDPKIIHRDVKAANILLDE---EFE-AVVGDFGLAKL 449 (621)
Q Consensus 417 -----------------~~~~ivH~Dlk~~Nill~~---~~~-~kl~DfGla~~ 449 (621)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2336799999999999987 455 58999998875
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.34 E-value=1.1e-08 Score=112.94 Aligned_cols=129 Identities=12% Similarity=0.066 Sum_probs=67.3
Q ss_pred cEEEEEcCCCCccccCccccc-CCCCCcEEEee--e----CCCCCCC-----cccccCCCccceeeeccccCCCCCCccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLG-LLKNLQYLELY--S----NNITGPI-----PSDLGNLTSLVSLDLYLNSFTGPIPDTL 133 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 133 (621)
+|+.|+++.|++++.....+. .+++|+.|+|+ + |++++.. +..+.++++|+.|+|++ .+++..+..+
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 444455555555543333333 35566666665 2 3444211 11144555666666654 4443323333
Q ss_pred cc-ccccccccccccccCCCCCCCc-cCCccccEEeeccCcCcccCCC--CCCCCCcccccccCCc
Q 007020 134 GK-LSKLRFLRLNNNSLSGPIPMSL-TNISSLQVLDLSNNRLSGVVPD--NGSFSLFTPISFANNL 195 (621)
Q Consensus 134 ~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~--~~~~~~l~~l~l~~N~ 195 (621)
.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... ...+++|+.|++++|+
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 33 6667777777777654333333 4567777777777777433221 2346677777777764
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=1e-08 Score=95.04 Aligned_cols=118 Identities=18% Similarity=0.165 Sum_probs=91.2
Q ss_pred cccCcccccCCCCCcEEEeeeC-CCCCC----CcccccCCCccceeeeccccCCCC----CCcccccccccccccccccc
Q 007020 78 SGQLVSQLGLLKNLQYLELYSN-NITGP----IPSDLGNLTSLVSLDLYLNSFTGP----IPDTLGKLSKLRFLRLNNNS 148 (621)
Q Consensus 78 ~~~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~ 148 (621)
...+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|+.|+|++|.
T Consensus 25 ~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 25 EETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 3345567788999999999999 98842 445677789999999999999742 23445666899999999999
Q ss_pred cCCC----CCCCccCCccccEEee--ccCcCcccCC-----CCCCCCCcccccccCCc
Q 007020 149 LSGP----IPMSLTNISSLQVLDL--SNNRLSGVVP-----DNGSFSLFTPISFANNL 195 (621)
Q Consensus 149 l~~~----~p~~~~~l~~L~~L~l--~~N~l~~~~~-----~~~~~~~l~~l~l~~N~ 195 (621)
|... +...+...++|+.|+| ++|.|..... .....++|+.|+|++|.
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 9843 3556777889999999 8899976421 12345789999999985
No 411
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.28 E-value=4.2e-06 Score=86.08 Aligned_cols=142 Identities=12% Similarity=0.069 Sum_probs=88.7
Q ss_pred CceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCc--eeeeeeeeecC-CceEEEEeccCC
Q 007020 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN--LLRLRGFCMTP-TERLLVYPYMAN 377 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 377 (621)
.+.++.|....+|+... +|+.+++|+.... ..+..|..++..+.... +.++++++... ...++||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 45689999999999886 5788999986432 25788888888886433 45566666554 568999999998
Q ss_pred Cchhhh------------------hccCCCCC-C-------C-----CCHHHH---------------------HHHHHH
Q 007020 378 GSVASC------------------LRERPPSQ-L-------P-----LDWPTR---------------------KRIALG 405 (621)
Q Consensus 378 gsL~~~------------------l~~~~~~~-~-------~-----~~~~~~---------------------~~i~~~ 405 (621)
.++.+. |+...... . + -.|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 766421 11111000 0 0 001100 011111
Q ss_pred HHHHHHHHHhC-CCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 406 SARGLSYLHDH-CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 406 i~~~L~~LH~~-~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+...++++... ..+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 22222233221 124789999999999998877788999998875
No 412
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.25 E-value=2.3e-06 Score=89.26 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=78.4
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
+|+.++|.+ .++.+...+|.++++|+.++|++|+++.+....|. ..+|+.+.|.+| ++.+-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 477777775 56656667788888888888887777755555555 477777777744 554555667777777777776
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+| ++.+....|.+ .+|+.+.+ .|.++.+.... ..+++|+.+.+.+|..
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 54 34344445555 56666666 34455554443 4555666666655543
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.22 E-value=1.5e-06 Score=90.58 Aligned_cols=126 Identities=12% Similarity=0.088 Sum_probs=103.1
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCC-----CCCCccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFT-----GPIPDTLGKLSKL 139 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L 139 (621)
.+|+.|+|.+| ++.+...+|.+ .+|+.+.| .|.++.+....|.++++|+.++|.+|.+. ...+..|.++++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 47889999875 66666778888 89999999 56677677889999999999999998875 3456789999999
Q ss_pred ccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 140 RFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 140 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
+.++|. |.++.+....|.+|.+|+.|.|..| ++.+.... ..+ +|+.+.+.+|..
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 999999 4577677788999999999999655 77776665 556 899999998853
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.22 E-value=3e-08 Score=109.43 Aligned_cols=86 Identities=16% Similarity=0.118 Sum_probs=39.7
Q ss_pred CCCCCcEEEeeeCCCCCCCccccc-CCCccceeeeccc-cCCCC-CCcccccccccccccccccccCCCCCCCc----cC
Q 007020 87 LLKNLQYLELYSNNITGPIPSDLG-NLTSLVSLDLYLN-SFTGP-IPDTLGKLSKLRFLRLNNNSLSGPIPMSL----TN 159 (621)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~ 159 (621)
.+++|++|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 345555555555555544343443 3555555555555 33311 22223345555555555555443322222 23
Q ss_pred CccccEEeeccCc
Q 007020 160 ISSLQVLDLSNNR 172 (621)
Q Consensus 160 l~~L~~L~l~~N~ 172 (621)
+++|+.|++++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 4455555555554
No 415
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.19 E-value=2.4e-06 Score=87.71 Aligned_cols=81 Identities=9% Similarity=0.008 Sum_probs=54.5
Q ss_pred cee-eeccCceEEEEEcC-------CCcEEEEEEecccCC--chhHHHHHHHHHHHHhccC---CceeeeeeeeecC---
Q 007020 302 NIL-GRGGFGKVYKGRLA-------DGSLVAVKRLKEERT--PGGELQFQTEVEMISMAVH---RNLLRLRGFCMTP--- 365 (621)
Q Consensus 302 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~--- 365 (621)
+.| +.|....+|+.... +++.+++|+...... ......+..|..+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999988754 267789998653220 0011356788888887752 3466777776554
Q ss_pred CceEEEEeccCCCchhh
Q 007020 366 TERLLVYPYMANGSVAS 382 (621)
Q Consensus 366 ~~~~lv~e~~~~gsL~~ 382 (621)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877654
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.18 E-value=1.8e-07 Score=95.96 Aligned_cols=128 Identities=16% Similarity=0.241 Sum_probs=74.3
Q ss_pred CCcEEEEEcCCCC-ccccCcccccCCCCCcEEEeeeCCCCCCCccccc--CCCccceeeecc--ccCCCC-----CCccc
Q 007020 64 DNSVIRVDLGNAA-LSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLG--NLTSLVSLDLYL--NSFTGP-----IPDTL 133 (621)
Q Consensus 64 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~ 133 (621)
..+|+.|+|++|. ++ ++. +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3567777777662 32 222 32 67788888877776633323333 677888887753 221111 11122
Q ss_pred --ccccccccccccccccCCCCCCCcc---CCccccEEeeccCcCccc-----CCCCCCCCCcccccccCCc
Q 007020 134 --GKLSKLRFLRLNNNSLSGPIPMSLT---NISSLQVLDLSNNRLSGV-----VPDNGSFSLFTPISFANNL 195 (621)
Q Consensus 134 --~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~-----~~~~~~~~~l~~l~l~~N~ 195 (621)
..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|.+. ......+++|+.|++++|.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 2467888888887777632222222 467788888888887763 2221346778888887774
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.03 E-value=4.1e-07 Score=93.28 Aligned_cols=113 Identities=16% Similarity=0.195 Sum_probs=82.3
Q ss_pred CCcEEEEEcCCCCccccCccccc--CCCCCcEEEeee--CCCCCC-----Ccccc--cCCCccceeeeccccCCCCCCcc
Q 007020 64 DNSVIRVDLGNAALSGQLVSQLG--LLKNLQYLELYS--NNITGP-----IPSDL--GNLTSLVSLDLYLNSFTGPIPDT 132 (621)
Q Consensus 64 ~~~l~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~l~~~~p~~ 132 (621)
..+|+.|+|..+.+.......+. .+++|++|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 35799999999988754444454 789999999974 222111 11223 35899999999999987533333
Q ss_pred cc---cccccccccccccccCCC----CCCCccCCccccEEeeccCcCccc
Q 007020 133 LG---KLSKLRFLRLNNNSLSGP----IPMSLTNISSLQVLDLSNNRLSGV 176 (621)
Q Consensus 133 ~~---~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 176 (621)
+. .+++|+.|+|+.|.|.+. ++..+.++++|+.|+|++|.|+..
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 32 589999999999999853 445556789999999999988743
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.02 E-value=3.3e-05 Score=78.55 Aligned_cols=142 Identities=18% Similarity=0.258 Sum_probs=79.6
Q ss_pred ceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc-----CCceeeee-e--eeecCCceEEEEe
Q 007020 302 NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV-----HRNLLRLR-G--FCMTPTERLLVYP 373 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e 373 (621)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+. .|.++... | +....+..+++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3466677899999987554 5899988642 123344555555443 23333311 1 1224566789999
Q ss_pred ccCCCchh--------------hhhccCC-----CCC-----CCCCHHHH------------------------------
Q 007020 374 YMANGSVA--------------SCLRERP-----PSQ-----LPLDWPTR------------------------------ 399 (621)
Q Consensus 374 ~~~~gsL~--------------~~l~~~~-----~~~-----~~~~~~~~------------------------------ 399 (621)
|++|.++. ..+|... ... ....|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1122110 000 00122211
Q ss_pred -HHHHHHHHHHHHHHHh----------CCCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 400 -KRIALGSARGLSYLHD----------HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 400 -~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
..+...+..++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223446667763 0234899999999999998888899999998753
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.96 E-value=3.1e-05 Score=80.63 Aligned_cols=76 Identities=11% Similarity=0.003 Sum_probs=48.9
Q ss_pred CceeeeccCceEEEEEcC-CCcEEEEEEecccCC------chhHHHHHHHHHHHHhccC--Cc-eeeeeeeeecCCceEE
Q 007020 301 KNILGRGGFGKVYKGRLA-DGSLVAVKRLKEERT------PGGELQFQTEVEMISMAVH--RN-LLRLRGFCMTPTERLL 370 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 370 (621)
.+.||.|.++.||++... +++.|+||....... ......+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357999999999999764 468899998653211 1122346778888877642 33 3345543 3456789
Q ss_pred EEeccCCC
Q 007020 371 VYPYMANG 378 (621)
Q Consensus 371 v~e~~~~g 378 (621)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.82 E-value=0.00014 Score=72.67 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=92.2
Q ss_pred CceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhcc---CCceeeeeeeeecCCceEEEEeccCC
Q 007020 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLVYPYMAN 377 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 377 (621)
.+.|+.|....+|+... ++..+++|+.... ....+..|...++.+. ...+.+++++....+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45689999999999987 4678899986532 2456888988888774 35677888888777889999999998
Q ss_pred Cchhh-----------hhccCCC-CCC-----------------CCCHHHHH---HHH----------------HHHHHH
Q 007020 378 GSVAS-----------CLRERPP-SQL-----------------PLDWPTRK---RIA----------------LGSARG 409 (621)
Q Consensus 378 gsL~~-----------~l~~~~~-~~~-----------------~~~~~~~~---~i~----------------~~i~~~ 409 (621)
..+.. .++.... ... .-+|.... ++. ..+...
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76521 2333221 000 12444321 111 111111
Q ss_pred -HHHHHh-CCCCCeEecCCCCCCeeeCCCCcEEEcccc
Q 007020 410 -LSYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFG 445 (621)
Q Consensus 410 -L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 445 (621)
...|.. ...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223321 2356899999999999999887 8899984
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.75 E-value=3.9e-06 Score=75.86 Aligned_cols=58 Identities=12% Similarity=0.205 Sum_probs=27.6
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCC-CCCCCcccccCC----Cccceeeeccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNN-ITGPIPSDLGNL----TSLVSLDLYLN 123 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N 123 (621)
+|+.|||+++.|+..--..+..+++|+.|+|+++. |+..--..+..+ ++|++|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCC
Confidence 45555655555554433444555555555555542 443222223332 24555555554
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.75 E-value=9.9e-05 Score=73.12 Aligned_cols=80 Identities=19% Similarity=0.266 Sum_probs=56.1
Q ss_pred cCCCcCceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccC---CceeeeeeeeecCCceEEEE
Q 007020 296 DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVH---RNLLRLRGFCMTPTERLLVY 372 (621)
Q Consensus 296 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~ 372 (621)
......+.+|.|..+.||+.+..+|+.|.+|+..... ......|..|...|+.+.- --+.+++++ +..++||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~ 89 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAM 89 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEE
Confidence 3444567799999999999999999999999865433 2223357889998887742 123444444 2347899
Q ss_pred eccCCCch
Q 007020 373 PYMANGSV 380 (621)
Q Consensus 373 e~~~~gsL 380 (621)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987643
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.72 E-value=6.4e-06 Score=74.45 Aligned_cols=93 Identities=12% Similarity=0.054 Sum_probs=69.5
Q ss_pred cccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeecccc-CCCCCCcccccc----cccccccccccc-cCCCCCC
Q 007020 82 VSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNS-FTGPIPDTLGKL----SKLRFLRLNNNS-LSGPIPM 155 (621)
Q Consensus 82 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~ 155 (621)
|.....-.+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|+.|+|+++. |+..--.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433333579999999999996655678999999999999995 664222234443 479999999985 8754344
Q ss_pred CccCCccccEEeeccCc-Cc
Q 007020 156 SLTNISSLQVLDLSNNR-LS 174 (621)
Q Consensus 156 ~~~~l~~L~~L~l~~N~-l~ 174 (621)
.+..+++|+.|+|+++. ++
T Consensus 134 ~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HGGGCTTCCEEEEESCTTCC
T ss_pred HHhcCCCCCEEECCCCCCCC
Confidence 57789999999999985 44
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.70 E-value=0.00022 Score=74.84 Aligned_cols=79 Identities=11% Similarity=0.015 Sum_probs=48.0
Q ss_pred CCeEecCCCCCCeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCC---CCCcccchhHHHHHHHHH
Q 007020 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGIMLLELI 495 (621)
Q Consensus 419 ~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~ell 495 (621)
+.++|+|+++.|||++.++ ++++||+.+..-.....-...-..-...|++|+...... .....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876 999999998753311100000000113466666543111 112345567788888887
Q ss_pred hCC
Q 007020 496 TGQ 498 (621)
Q Consensus 496 tg~ 498 (621)
++.
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 425
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.41 E-value=0.00055 Score=68.17 Aligned_cols=71 Identities=10% Similarity=0.073 Sum_probs=44.8
Q ss_pred CceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCcee-eeeeeeecCCceEEEEecc-CCC
Q 007020 301 KNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLL-RLRGFCMTPTERLLVYPYM-ANG 378 (621)
Q Consensus 301 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~-~~g 378 (621)
.+.|+.|....+|+. +.+++|+...... .......|..+++.+....+. +++++ +.+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~--~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE--EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc--ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 567999999999999 4588888754311 111245677777766533333 44444 344567899999 654
Q ss_pred ch
Q 007020 379 SV 380 (621)
Q Consensus 379 sL 380 (621)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 426
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.38 E-value=0.00044 Score=71.29 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=92.9
Q ss_pred cEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCccccccccccccccc
Q 007020 66 SVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLN 145 (621)
Q Consensus 66 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 145 (621)
.++.+.+..+ +..+....|..+.+|+.+.+..+ ++.+-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3445555433 44345566777888888888765 66566677888888888888655 553445678888888888888
Q ss_pred ccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCCCCCCCC
Q 007020 146 NNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGPVTGRPC 206 (621)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~~~~~~c 206 (621)
+|.++.+....|.+|.+|+.+.|..+ ++.+.... ..+.+|+.+.+..|-..-|......|
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~v~~I~~~aF~~c 355 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKSITLIESGAFEGS 355 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTS
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCccCEEchhHhhCC
Confidence 88887666778888888888888654 66665554 56677888887665433333333334
No 427
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.37 E-value=0.00016 Score=75.17 Aligned_cols=116 Identities=6% Similarity=0.122 Sum_probs=77.8
Q ss_pred ccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCC
Q 007020 77 LSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMS 156 (621)
Q Consensus 77 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 156 (621)
++.+-..+|.++.+|+.+.+.++..+ +....|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++.+....
T Consensus 253 v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 253 VARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp EEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 44344556777788888887665544 556677778888888875 4455344566777888888887654 55455567
Q ss_pred ccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcc
Q 007020 157 LTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLD 196 (621)
Q Consensus 157 ~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~ 196 (621)
|.+|.+|+.+.+..+ ++.+.... ..+.+|+.+.+.+|..
T Consensus 330 F~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 778888888887544 55555444 5667778887777654
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.33 E-value=0.00091 Score=67.57 Aligned_cols=142 Identities=18% Similarity=0.126 Sum_probs=72.4
Q ss_pred ceeeeccCce-EEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccC--CceeeeeeeeecCCceEEEEeccCCC
Q 007020 302 NILGRGGFGK-VYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVH--RNLLRLRGFCMTPTERLLVYPYMANG 378 (621)
Q Consensus 302 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 378 (621)
+.|+.|.... +|+....+|+.+++|....... ..+..|+.++..+.. -.+.+++.+..+. -+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 3465555444 6677654467787876543210 234556666666542 2344566653322 37899999876
Q ss_pred chhhhhccC---------------------CCCCCC-CCHHHHH-------H-------------HHHHHHHHHHHHHh-
Q 007020 379 SVASCLRER---------------------PPSQLP-LDWPTRK-------R-------------IALGSARGLSYLHD- 415 (621)
Q Consensus 379 sL~~~l~~~---------------------~~~~~~-~~~~~~~-------~-------------i~~~i~~~L~~LH~- 415 (621)
++.+.+... .....+ ++..... . ....+...++.+..
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 665433211 110111 2211100 0 00111122233311
Q ss_pred --CCCCCeEecCCCCCCeeeCCC----CcEEEccccccee
Q 007020 416 --HCDPKIIHRDVKAANILLDEE----FEAVVGDFGLAKL 449 (621)
Q Consensus 416 --~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla~~ 449 (621)
...+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123489999999999999874 6799999998875
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.26 E-value=1.6e-05 Score=73.15 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=29.2
Q ss_pred CcEEEEEcCCC-Cccc----cCcccccCCCCCcEEEeeeCCCCCC----CcccccCCCccceeeeccccCC
Q 007020 65 NSVIRVDLGNA-ALSG----QLVSQLGLLKNLQYLELYSNNITGP----IPSDLGNLTSLVSLDLYLNSFT 126 (621)
Q Consensus 65 ~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 126 (621)
..|+.|+|++| +|.. .+...+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34555666553 4442 1233444445555555555555521 2223333445555555555554
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.20 E-value=0.00036 Score=72.42 Aligned_cols=124 Identities=17% Similarity=0.137 Sum_probs=84.5
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
..|+.+.+.++-.+ +....|.++++|+.+.+. +.++.+....|.++.+|+.++|..| ++..-..+|.++++|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 35666777655333 556678888999999986 5566566778999999999999865 66455677889999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCCCCCCCcccccccCC
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANN 194 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N 194 (621)
..+ ++.+....|.+|.+|+.+++.+|.... .......+|+.+.+..|
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC--------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCC
Confidence 755 664666788899999999998876542 12234456666666544
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.20 E-value=0.0033 Score=63.19 Aligned_cols=143 Identities=16% Similarity=0.143 Sum_probs=81.3
Q ss_pred ceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCc--eeeeeee-----eecCCceEEEEec
Q 007020 302 NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN--LLRLRGF-----CMTPTERLLVYPY 374 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e~ 374 (621)
..++ |....||+....+|+.+++|..+.... ....+..|..++..+.... +.+++.. ....+..+++|+|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3566 888899998877777899999864322 2345667887777664222 3444433 1123456789999
Q ss_pred cCCCchhh--------------hhcc----CCC-CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhC
Q 007020 375 MANGSVAS--------------CLRE----RPP-SQLPLDWPTR----KRI---------------ALGSARGLSYLHDH 416 (621)
Q Consensus 375 ~~~gsL~~--------------~l~~----~~~-~~~~~~~~~~----~~i---------------~~~i~~~L~~LH~~ 416 (621)
++|..+.. .+|. ... ....+++... ..+ ...+...++.+...
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99854321 0111 000 0011222111 000 11111223333221
Q ss_pred ----CCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 417 ----CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 417 ----~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234688999999999999 4 899999998764
No 432
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.19 E-value=0.00052 Score=70.77 Aligned_cols=111 Identities=11% Similarity=0.088 Sum_probs=90.1
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
..|+.+.+..+ ++.+-...|.++.+|+.+.+..+ ++.+....|.++++|+.+.|.+|.++..-...|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 46888888765 66566778999999999999765 66566678999999999999999998666778999999999999
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCC
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPD 179 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 179 (621)
..+ ++.+....|.+|.+|+.+.+..+ ++.+...
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~ 350 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESG 350 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchh
Confidence 765 66566778999999999998755 5555443
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.0029 Score=63.42 Aligned_cols=159 Identities=9% Similarity=0.043 Sum_probs=85.9
Q ss_pred CHHHHHHHhcCCCcC-----ceeeeccCceEEEEEcCCCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCc--eeeee
Q 007020 287 SLRELQVATDSFSNK-----NILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN--LLRLR 359 (621)
Q Consensus 287 ~~~~~~~~~~~~~~~-----~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 359 (621)
+.+++.....+|... +.|+.|....+|+....+| .+++|+...... ...+..|..++..+.... +.+++
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344455444456542 3466788889999987655 688998765211 224556777776664222 22333
Q ss_pred ee------eecCCceEEEEeccCCCchhh--------------hhccC----CCCC-CCC---CHHHHHH----------
Q 007020 360 GF------CMTPTERLLVYPYMANGSVAS--------------CLRER----PPSQ-LPL---DWPTRKR---------- 401 (621)
Q Consensus 360 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~~-~~~---~~~~~~~---------- 401 (621)
.. ....+..+++|+|++|..+.. .++.. .... ... .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 112355689999999865421 12211 0000 001 1221100
Q ss_pred --HHHHHHHHHHHHHhC----CCCCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 402 --IALGSARGLSYLHDH----CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 402 --i~~~i~~~L~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
+...+.+.+++++.. ..++++|+|+++.|||++.+..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555532 234799999999999999876668999998763
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.15 E-value=0.00047 Score=59.15 Aligned_cols=56 Identities=29% Similarity=0.317 Sum_probs=39.8
Q ss_pred EEEcCCCCcc-ccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCC
Q 007020 69 RVDLGNAALS-GQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFT 126 (621)
Q Consensus 69 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 126 (621)
.++.++++|+ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5788888887 24454332 46788888888888666667777888888888887765
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.14 E-value=0.001 Score=69.81 Aligned_cols=72 Identities=17% Similarity=0.223 Sum_probs=48.5
Q ss_pred ceeeeccCceEEEEEcCC--------CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCce-eeeeeeeecCCceEEEE
Q 007020 302 NILGRGGFGKVYKGRLAD--------GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVY 372 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 372 (621)
+.|+.|....||+....+ ++.|++|+...... ...+..|..+++.+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 468888889999998653 57899998743211 1345578888887754444 456665432 3899
Q ss_pred eccCCCch
Q 007020 373 PYMANGSV 380 (621)
Q Consensus 373 e~~~~gsL 380 (621)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987444
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.13 E-value=0.00045 Score=59.32 Aligned_cols=56 Identities=23% Similarity=0.288 Sum_probs=32.5
Q ss_pred EEEeeeCCCC-CCCcccccCCCccceeeeccccCCCCCCcccccccccccccccccccC
Q 007020 93 YLELYSNNIT-GPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLS 150 (621)
Q Consensus 93 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 150 (621)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 23443322 24666666666666544555666666666666666553
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.11 E-value=0.00099 Score=69.09 Aligned_cols=137 Identities=9% Similarity=0.035 Sum_probs=73.0
Q ss_pred CcEEEEEcCCCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeeccccCCCCCCcccccccccccccc
Q 007020 65 NSVIRVDLGNAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRL 144 (621)
Q Consensus 65 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 144 (621)
.+|+.+.|.. .++.+-..+|.++++|+.++|.+| ++.+-...|.++.+|+.+.+..+ ++..-...|.++..+.....
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC
Confidence 4577777764 365555566777777777777644 55445556777777776666544 22133333444433322222
Q ss_pred cccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCcccccccCCcccCCCCCCCCCC
Q 007020 145 NNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLFTPISFANNLDLCGPVTGRPCP 207 (621)
Q Consensus 145 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~~~~~~~~~c~ 207 (621)
..... .....|.++++|+.+.+.++. ..+.... ..+.+|+.+.+..|-..-+......|.
T Consensus 148 ~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~ 208 (394)
T 4fs7_A 148 EGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECI 208 (394)
T ss_dssp TTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCT
T ss_pred ccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCCceEeCchhhcccc
Confidence 22211 223456677777777776543 3343333 455667777776664433333333443
No 438
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.09 E-value=0.00076 Score=69.97 Aligned_cols=84 Identities=11% Similarity=0.055 Sum_probs=52.4
Q ss_pred cccCCCccceeeeccccCCCCCCcccccccccccccccccccCCCCCCCccCCccccEEeeccCcCcccCCCC-CCCCCc
Q 007020 108 DLGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDN-GSFSLF 186 (621)
Q Consensus 108 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l 186 (621)
.|..+.+|+.+.+.+| ++..-...|.++++|+.++|.++ ++.+....|.+|.+|+.+++..| ++.+.... ..+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 4566666666666554 44334456777777777777544 55444566777777777777665 65555544 556667
Q ss_pred ccccccCC
Q 007020 187 TPISFANN 194 (621)
Q Consensus 187 ~~l~l~~N 194 (621)
+.+.+..|
T Consensus 369 ~~i~lp~~ 376 (394)
T 4fs7_A 369 KKVELPKR 376 (394)
T ss_dssp CEEEEEGG
T ss_pred CEEEECCC
Confidence 77766554
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.06 E-value=0.003 Score=64.78 Aligned_cols=142 Identities=16% Similarity=0.144 Sum_probs=82.4
Q ss_pred ceeeeccCceEEEEEcC--------CCcEEEEEEecccCCchhHHHHHHHHHHHHhccCCce-eeeeeeeecCCceEEEE
Q 007020 302 NILGRGGFGKVYKGRLA--------DGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVY 372 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 372 (621)
+.|..|-...+|+.... +++.|++|+.... ......+.+|..+++.+.-.++ .++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45777888899999864 2478999986321 1223456789998887753222 456666543 3999
Q ss_pred eccCCCchhhh-----------------hccCCC-CCCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 007020 373 PYMANGSVASC-----------------LRERPP-SQLPLD--WPTRKRIALGSAR-------------------GLSYL 413 (621)
Q Consensus 373 e~~~~gsL~~~-----------------l~~~~~-~~~~~~--~~~~~~i~~~i~~-------------------~L~~L 413 (621)
||++|.+|..- +|.... ...... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 122111 011122 3444444443321 23333
Q ss_pred H----hC-CCCCeEecCCCCCCeeeCCC----CcEEEccccccee
Q 007020 414 H----DH-CDPKIIHRDVKAANILLDEE----FEAVVGDFGLAKL 449 (621)
Q Consensus 414 H----~~-~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla~~ 449 (621)
. .. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 21 23378899999999999876 7899999998864
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.89 E-value=0.0026 Score=65.24 Aligned_cols=73 Identities=8% Similarity=0.050 Sum_probs=43.6
Q ss_pred ceeeeccCceEEEEEcCC---------CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCce-eeeeeeeecCCceEEE
Q 007020 302 NILGRGGFGKVYKGRLAD---------GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLV 371 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv 371 (621)
+.|+.|....+|+....+ ++.+++|+..... ........|..+++.+...++ .++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 457788889999998653 2688888864321 111134678888877753343 3565543 23789
Q ss_pred EeccCCCch
Q 007020 372 YPYMANGSV 380 (621)
Q Consensus 372 ~e~~~~gsL 380 (621)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999998544
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.87 E-value=0.0037 Score=65.90 Aligned_cols=73 Identities=10% Similarity=0.101 Sum_probs=47.1
Q ss_pred ceeeeccCceEEEEEcCC-CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCce-eeeeeeeecCCceEEEEeccCCCc
Q 007020 302 NILGRGGFGKVYKGRLAD-GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVYPYMANGS 379 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 379 (621)
+.|+.|-...+|+....+ +..|++|+..... . .......|..++..+...++ .++++.+. + .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-D-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-C-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-h-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 568888889999998764 4788898874322 1 11123588888888865444 45666652 2 35999999855
Q ss_pred h
Q 007020 380 V 380 (621)
Q Consensus 380 L 380 (621)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.83 E-value=0.0061 Score=61.63 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=27.8
Q ss_pred CCeEecCCCCCCeeeCCCCcEEEccccccee
Q 007020 419 PKIIHRDVKAANILLDEEFEAVVGDFGLAKL 449 (621)
Q Consensus 419 ~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 449 (621)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.59 E-value=0.00012 Score=67.44 Aligned_cols=114 Identities=12% Similarity=0.103 Sum_probs=78.7
Q ss_pred CcccccCCCCCcEEEeeeC-CCCC----CCcccccCCCccceeeeccccCCCC----CCcccccccccccccccccccCC
Q 007020 81 LVSQLGLLKNLQYLELYSN-NITG----PIPSDLGNLTSLVSLDLYLNSFTGP----IPDTLGKLSKLRFLRLNNNSLSG 151 (621)
Q Consensus 81 ~~~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 151 (621)
+...+.+-+.|++|+|++| +|.. .+...+..-+.|+.|+|++|+|... +.+.+..-+.|+.|+|++|.|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3445556689999999985 8873 2455677788999999999999832 33445567899999999999984
Q ss_pred C----CCCCccCCccccEEeeccCc---CcccC-----CCCCCCCCcccccccCC
Q 007020 152 P----IPMSLTNISSLQVLDLSNNR---LSGVV-----PDNGSFSLFTPISFANN 194 (621)
Q Consensus 152 ~----~p~~~~~l~~L~~L~l~~N~---l~~~~-----~~~~~~~~l~~l~l~~N 194 (621)
. +-..+..-+.|+.|+|++|. |.... .....-+.|+.|+++.|
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~ 167 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 167 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCC
Confidence 2 22244555679999998763 33211 11123456777887655
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.20 E-value=0.061 Score=49.71 Aligned_cols=101 Identities=16% Similarity=0.110 Sum_probs=64.4
Q ss_pred CchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccceecccCCCee
Q 007020 378 GSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 457 (621)
Q Consensus 378 gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 457 (621)
-||.+.|...+ .++++.+++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---------
Confidence 37888888754 3599999999999999998876321111 1233456888899998887763 1110
Q ss_pred eecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCC
Q 007020 458 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 498 (621)
Q Consensus 458 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~ 498 (621)
.....+.|||... ...+.+.=|||+|+++|.-+-=.
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg 133 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG 133 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence 1233466888763 34467788999999999988633
No 445
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=95.85 E-value=0.0057 Score=40.49 Aligned_cols=34 Identities=24% Similarity=0.217 Sum_probs=24.2
Q ss_pred CcceeeeeehhhhHHHhhhhHHHHHhhhcCCCCc
Q 007020 232 ATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQE 265 (621)
Q Consensus 232 ~~~~i~~~v~~~~~~~~~~~~~~~~~~~r~~~~~ 265 (621)
.+.+|++++++|++.++++.+..++++|||+.++
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 3456888888888777777777777777766543
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.64 E-value=0.037 Score=56.95 Aligned_cols=144 Identities=15% Similarity=0.122 Sum_probs=80.9
Q ss_pred ceeeeccCceEEEEEcCC--------CcEEEEEEecccCCc----------hhH-------HHHHHHHHHHHhccCCc-e
Q 007020 302 NILGRGGFGKVYKGRLAD--------GSLVAVKRLKEERTP----------GGE-------LQFQTEVEMISMAVHRN-L 355 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~~-------~~~~~E~~~l~~l~h~n-i 355 (621)
+.|..|-...+|+....+ ++.|.+++.-..... ..+ ..+..|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788899988653 367888886432110 001 12234888887775333 4
Q ss_pred eeeeeeeecCCceEEEEeccCCCchhhh-----------------hccCCC-CCCCCC--HHHHHHHHHHHH--------
Q 007020 356 LRLRGFCMTPTERLLVYPYMANGSVASC-----------------LRERPP-SQLPLD--WPTRKRIALGSA-------- 407 (621)
Q Consensus 356 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~~-~~~~~~--~~~~~~i~~~i~-------- 407 (621)
.++++++.. .+|+||++|-+|..- +|.... -..... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 456666542 289999997554211 111110 011122 223333333221
Q ss_pred --------------HHHH----HHHhC-CCCCeEecCCCCCCeeeCCC------CcEEEccccccee
Q 007020 408 --------------RGLS----YLHDH-CDPKIIHRDVKAANILLDEE------FEAVVGDFGLAKL 449 (621)
Q Consensus 408 --------------~~L~----~LH~~-~~~~ivH~Dlk~~Nill~~~------~~~kl~DfGla~~ 449 (621)
.-+. +|... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 22222 23378899999999999876 7899999998864
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=95.32 E-value=0.0087 Score=39.49 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=25.1
Q ss_pred CCcceeeeeehhhhHHHhhhhHHHHHhhhcCCCCc
Q 007020 231 SATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQE 265 (621)
Q Consensus 231 ~~~~~i~~~v~~~~~~~~~~~~~~~~~~~r~~~~~ 265 (621)
+....|++++++|++.++++.+..|+++|||+.++
T Consensus 7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34456888888888887777777777777776554
No 448
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.10 E-value=0.044 Score=56.93 Aligned_cols=73 Identities=5% Similarity=0.063 Sum_probs=47.1
Q ss_pred ceeeeccCceEEEEEcCC--------CcEEEEEEecccCCchhHHHHHHHHHHHHhccCCce-eeeeeeeecCCceEEEE
Q 007020 302 NILGRGGFGKVYKGRLAD--------GSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVY 372 (621)
Q Consensus 302 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 372 (621)
+.+..|-...+|+....+ ++.|++|+..... .......+|..+++.+...++ .++++.+ .-++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEE
Confidence 457778888999998653 5789999864321 111234678888877753333 3455433 237899
Q ss_pred eccCCCch
Q 007020 373 PYMANGSV 380 (621)
Q Consensus 373 e~~~~gsL 380 (621)
||++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998664
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.58 E-value=0.12 Score=53.40 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=25.4
Q ss_pred CeEecCCCCCCeee------CCCCcEEEccccccee
Q 007020 420 KIIHRDVKAANILL------DEEFEAVVGDFGLAKL 449 (621)
Q Consensus 420 ~ivH~Dlk~~Nill------~~~~~~kl~DfGla~~ 449 (621)
.++|+|+.+.|||+ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=89.87 E-value=0.54 Score=43.30 Aligned_cols=116 Identities=11% Similarity=0.108 Sum_probs=78.8
Q ss_pred cCCceeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 007020 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAAN 430 (621)
Q Consensus 351 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 430 (621)
.||+++.. .+-.+++...+.++.-+.+.=...++. .+...+++++.+|+....++++. +|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 57888865 455566666666665543322233443 67789999999999888777665 788999999
Q ss_pred eeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007020 431 ILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502 (621)
Q Consensus 431 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~ 502 (621)
++++.++.+++.-.|+...+. |. ..+...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCC------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999998777643221 11 00111112345678889999999886
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=88.41 E-value=0.13 Score=33.80 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=14.8
Q ss_pred eeeeehhhhHHHhhhhHHHHHhhhcCCCC
Q 007020 236 IAGGVAAGAALLFAAPAIAFAWWRRRKPQ 264 (621)
Q Consensus 236 i~~~v~~~~~~~~~~~~~~~~~~~r~~~~ 264 (621)
++++++ |+++++++.+..++|.|||+.+
T Consensus 14 Ia~~vV-Gvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVV-GILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHH-HHHHHHHHHHHHHhheehhhhh
Confidence 444433 3555555555556666666544
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=86.40 E-value=0.26 Score=31.47 Aligned_cols=28 Identities=18% Similarity=-0.059 Sum_probs=12.1
Q ss_pred ceeeeeehhhhHHHhhhhHHHHHhhhcC
Q 007020 234 GAIAGGVAAGAALLFAAPAIAFAWWRRR 261 (621)
Q Consensus 234 ~~i~~~v~~~~~~~~~~~~~~~~~~~r~ 261 (621)
.+++..++..++.+.++.++.|+++|||
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 3444433333333333444445555543
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.46 E-value=1.6 Score=40.25 Aligned_cols=115 Identities=16% Similarity=0.181 Sum_probs=77.5
Q ss_pred cCCceeeeeeeeecCCceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCC
Q 007020 351 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGSARGLS-YLHDHCDPKIIHRDVKAA 429 (621)
Q Consensus 351 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlk~~ 429 (621)
.||++ -..+-.+++...+.++.-+++.=...++. ++...+++++.+|+.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 47777 44445667777777776545433444443 677899999999888777 66554 78889999
Q ss_pred CeeeCCCCcEEEcccccceecccCCCeeeecccccccccchhhhccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007020 430 NILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 502 (621)
Q Consensus 430 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~pf~ 502 (621)
|++++.++.++|.-.|+-..+ +|.-+ +..-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877764322 22111 111112345677888888888885
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.19 E-value=0.21 Score=52.59 Aligned_cols=61 Identities=5% Similarity=0.008 Sum_probs=17.9
Q ss_pred cCceeeeccCceEEEEEcCC-CcEEEE------EEecccCCc-hhHHHHHHHHHHHHhccCCceeeeeeeee
Q 007020 300 NKNILGRGGFGKVYKGRLAD-GSLVAV------KRLKEERTP-GGELQFQTEVEMISMAVHRNLLRLRGFCM 363 (621)
Q Consensus 300 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 363 (621)
+.+.|| ||.||+|.+.. ...||| |..+..... .....+.+|..++...+|+|+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 445676 99999999853 357888 766543322 22345778888888899999999988754
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=80.13 E-value=0.44 Score=31.06 Aligned_cols=29 Identities=41% Similarity=0.646 Sum_probs=14.2
Q ss_pred cceeeeeehhhhHHHhhhhHHHHHhhhcC
Q 007020 233 TGAIAGGVAAGAALLFAAPAIAFAWWRRR 261 (621)
Q Consensus 233 ~~~i~~~v~~~~~~~~~~~~~~~~~~~r~ 261 (621)
...+++++++|++++++++.+.++++||+
T Consensus 12 ~~~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred eEEEEeehhHHHHHHHHHHHHheeEeeec
Confidence 34455666666555442344444444443
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=66.95 E-value=0.37 Score=29.89 Aligned_cols=26 Identities=19% Similarity=0.185 Sum_probs=12.7
Q ss_pred eeeeeehhhhHHHhhhhHHHHHhhhcC
Q 007020 235 AIAGGVAAGAALLFAAPAIAFAWWRRR 261 (621)
Q Consensus 235 ~i~~~v~~~~~~~~~~~~~~~~~~~r~ 261 (621)
.+++++.+ +++++++.+...+++|||
T Consensus 9 sIaagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 9 FIIATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred EeHHHHHH-HHHHHHHHHHhheEEeec
Confidence 34444444 444444444455555555
No 457
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=65.79 E-value=1.1 Score=27.24 Aligned_cols=28 Identities=32% Similarity=0.598 Sum_probs=19.8
Q ss_pred eeeeeehhhhHHHhhhhHHHHHhhhcCC
Q 007020 235 AIAGGVAAGAALLFAAPAIAFAWWRRRK 262 (621)
Q Consensus 235 ~i~~~v~~~~~~~~~~~~~~~~~~~r~~ 262 (621)
.++..+++|.++++.++...|.+||.|+
T Consensus 7 ~malt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 7 TMALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCceeEEEcccc
Confidence 3445566777777777777788888765
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.12 E-value=24 Score=27.78 Aligned_cols=16 Identities=13% Similarity=0.027 Sum_probs=6.6
Q ss_pred ccccCCCccceeeecc
Q 007020 107 SDLGNLTSLVSLDLYL 122 (621)
Q Consensus 107 ~~~~~l~~L~~L~L~~ 122 (621)
..|.++++|+.+.|..
T Consensus 14 ~aF~~c~~L~~i~iP~ 29 (100)
T 2lz0_A 14 SLFAGNTVIREITVQP 29 (100)
T ss_dssp CTTTTCTTCCCEEECT
T ss_pred HHhcCCCCCcEEEcCC
Confidence 3344444444444433
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=50.58 E-value=27 Score=27.54 Aligned_cols=50 Identities=16% Similarity=0.017 Sum_probs=40.0
Q ss_pred CCCccccCcccccCCCCCcEEEeeeCCCCCCCcccccCCCccceeeecccc
Q 007020 74 NAALSGQLVSQLGLLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNS 124 (621)
Q Consensus 74 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 124 (621)
+..++.+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.|....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 34566667788999999999999876 554667789999999999997754
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=50.28 E-value=1e+02 Score=33.03 Aligned_cols=46 Identities=20% Similarity=0.151 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 396 WPTRKRIALGSA--RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 396 ~~~~~~i~~~i~--~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
+..+..++..+| ..+.|+=.. +|=.++|||++.+|++.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445566666654 356666655 5888999999999999999999874
No 461
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=37.73 E-value=1.6e+02 Score=32.03 Aligned_cols=45 Identities=22% Similarity=0.181 Sum_probs=33.7
Q ss_pred HHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCeeeCCCCcEEEcccccce
Q 007020 397 PTRKRIALGSA--RGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 448 (621)
Q Consensus 397 ~~~~~i~~~i~--~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 448 (621)
..+..++.++| ..+.|+=.. +|=+++|||++.+|++.-+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34555555554 345666544 6899999999999999999999874
No 462
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=28.87 E-value=2e+02 Score=28.14 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=42.6
Q ss_pred ceEEEEeccCCCchhhhhccCCCCCCCCCHHHHHHHHHHH--HHHHHHHHhCCCC-Ce-EecCCCCCCeeeCCCC-cEEE
Q 007020 367 ERLLVYPYMANGSVASCLRERPPSQLPLDWPTRKRIALGS--ARGLSYLHDHCDP-KI-IHRDVKAANILLDEEF-EAVV 441 (621)
Q Consensus 367 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i--~~~L~~LH~~~~~-~i-vH~Dlk~~Nill~~~~-~~kl 441 (621)
..+++|||.+|..|...-.....+ .+.. +.+.++ .-++..+..+... +. .+.--.+.|||++.++ .+.+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~--~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ 229 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPE--VLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVP 229 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHH--HSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEE
T ss_pred cceehhhhcCCCccccchhhhhhh--hcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEE
Confidence 456999999987666542221000 0222 222222 3355666655311 11 1122478899997654 4889
Q ss_pred ccccccee
Q 007020 442 GDFGLAKL 449 (621)
Q Consensus 442 ~DfGla~~ 449 (621)
+|-+.+..
T Consensus 230 IDhn~af~ 237 (342)
T 1cja_A 230 IDSKIIPL 237 (342)
T ss_dssp CSCCCCCC
T ss_pred EcCCcccc
Confidence 99999864
No 463
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=27.94 E-value=32 Score=23.62 Aligned_cols=20 Identities=25% Similarity=0.034 Sum_probs=9.2
Q ss_pred ceeeeeehhhhHHHhhhhHH
Q 007020 234 GAIAGGVAAGAALLFAAPAI 253 (621)
Q Consensus 234 ~~i~~~v~~~~~~~~~~~~~ 253 (621)
..+++++.+|..++.+++++
T Consensus 10 WiIi~svl~GLLLL~Lii~~ 29 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLLILA 29 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444555555444444333
No 464
>2li5_B Ubiquitin-like modifier-activating enzyme ATG7; autophagy, protein transport; NMR {Saccharomyces cerevisiae}
Probab=21.64 E-value=19 Score=20.85 Aligned_cols=25 Identities=28% Similarity=0.494 Sum_probs=19.6
Q ss_pred HhhhhccccCCCCCCCcccCCCccc
Q 007020 588 EVLRQEVELAPHPNSDWIVDSTENL 612 (621)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (621)
.+.+||++..-+..-.|.++.++++
T Consensus 9 svikqeverlgndvfeweddesdei 33 (34)
T 2li5_B 9 SVIKQEVERLGNDVFEWEDDESDEI 33 (34)
T ss_dssp CCCCCCCSSCCGGGCCSSCTTSGGG
T ss_pred HHHHHHHHHhcCccccccccccccc
Confidence 3467788888888888999988875
No 465
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.62 E-value=64 Score=22.15 Aligned_cols=20 Identities=25% Similarity=0.077 Sum_probs=9.2
Q ss_pred ceeeeeehhhhHHHhhhhHH
Q 007020 234 GAIAGGVAAGAALLFAAPAI 253 (621)
Q Consensus 234 ~~i~~~v~~~~~~~~~~~~~ 253 (621)
..+++++.+|..++.+++++
T Consensus 13 wiIi~svl~GLllL~li~~~ 32 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLA 32 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444555555444444333
Done!