Your job contains 1 sequence.
>007021
MSARRGGKSPIAAGSSNTSVKGKNVTEVSNSQVDHLSGSVADISLDSAQDDGGWEVYVRK
SKNKAGSGTTKSFGSQNSNYKAWGHLDSTQKPGMRGNGSSGRAPAKTWTTVNADSKIPAG
RVNARPQLTNWVPETNNMATQTGIRPPLEHGWNWQSRAGSTIFKHSEDGHDKESGNLDEV
HKDNVEDDYDDEKDDDSNVSDDSDDELLSDEFDSDTSQKSHDTRKKSRWFKKFFESLESL
TVEEINEPARQWHCPACQGGPGAIDWYRGLQPLMTHAKTKGSKRVKLHRELAELLDEELR
RRGTSVIPAGEVFGKWKGLKDTEKDHEIVWPPMVIIMNTRLDKDENDKWTGMGNQELLEY
FILYAAVRARHSYGPQGHRGMSVLIFESSAGGYLEAERLHKHFAEQGTDRDSWNNSNRRV
LFHAGGKRQLYGFMALKEDLDVFNQHCHGKTKQKFEMRSYHEMVVNQIRQMSEDNQQLIY
LKNRVVKEQRHSKALEATFSIVSEKLRETMEENRIVKQRTKMQHEQNKEEVKQSIANPKN
TEDYKLRAEEIAKFITVQDKEMEEFVAARDRLIKFHGEKMDAMRRRHWEEEVELEKGFDA
ELTQLMEKYSTHITEVAADSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007021
(621 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171716 - symbol:SGS3 "SUPPRESSOR OF GENE SILE... 1252 1.6e-127 1
TAIR|locus:2114560 - symbol:IDN2 "AT3G48670" species:3702... 142 3.4e-06 1
TAIR|locus:2125078 - symbol:AT4G01180 "AT4G01180" species... 136 1.2e-05 1
TAIR|locus:2148323 - symbol:AT5G59390 species:3702 "Arabi... 126 0.00015 1
UNIPROTKB|F1NGZ3 - symbol:F1NGZ3 "Uncharacterized protein... 132 0.00020 1
>TAIR|locus:2171716 [details] [associations]
symbol:SGS3 "SUPPRESSOR OF GENE SILENCING 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IDA]
[GO:0009616 "virus induced gene silencing" evidence=RCA;IMP]
[GO:0010050 "vegetative phase change" evidence=RCA;IMP] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA;IMP] [GO:0051607 "defense response to virus"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0010025 "wax biosynthetic process" evidence=IGI] GO:GO:0005783
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0048471
GO:GO:0019048 GO:GO:0010025 GO:GO:0010267 GO:GO:0010050
EMBL:AB025633 GO:GO:0050688 GO:GO:0009616 EMBL:AF239719
EMBL:BT002944 EMBL:BT004380 IPI:IPI00531176 RefSeq:NP_197747.1
UniGene:At.31001 ProteinModelPortal:Q9LDX1 DIP:DIP-29658N
MINT:MINT-7014693 STRING:Q9LDX1 PaxDb:Q9LDX1 PRIDE:Q9LDX1
EnsemblPlants:AT5G23570.1 GeneID:832422 KEGG:ath:AT5G23570
TAIR:At5g23570 eggNOG:NOG259720 HOGENOM:HOG000085166
InParanoid:Q9LDX1 OMA:PPMVIIM PhylomeDB:Q9LDX1
ProtClustDB:CLSN2914848 Genevestigator:Q9LDX1 InterPro:IPR005380
InterPro:IPR005381 Pfam:PF03468 Pfam:PF03470 Uniprot:Q9LDX1
Length = 625
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 278/593 (46%), Positives = 359/593 (60%)
Query: 21 KGKNVTEVSNSQVDHLSGSVADISLDSAQDDGGWEVYVRKSKNKAGSGTTKSFGSQNSNY 80
K KNV +V+ L +A L S+QDDGG E V KNK G T + N
Sbjct: 10 KEKNVQGGYRPEVEQLVQGLAGTRLASSQDDGG-EWEVISKKNKNKPGNTSGKTWVSQNS 68
Query: 81 KAWGHLDSTQKPGMRGNGSSGRAPAKTWTTVNADSKIPAGRVNARPQLTNWVPETNNMAT 140
Q+ G RG+ SGR + N + + ++ R + + + N +A
Sbjct: 69 NP-PRAWGGQQQG-RGSNVSGRGNNVSGRG-NGNGRGIQANISGRGRALSRKYDNNFVAP 125
Query: 141 QTGIRPPLEHGWNWQSRAGSTIFKHSEDGHDKESGNLDEVHXXXXXXXXXXXXXXXXXXX 200
RPPLE GWNWQ+R GS ++ D E D+V
Sbjct: 126 PPVSRPPLEGGWNWQARGGSAQHTAVQEFPDVE----DDVDNASEEENDSDALDDSDDDL 181
Query: 201 XXXXXXXXXXXXXXXTSQKSHDTRKKSRWFKKFFESLESLTVEEINEPARQWHCPACQGG 260
SQKSH +RK+++WFKKFF SL+SL++E+INEP RQWHCPACQ G
Sbjct: 182 ASDDYDSD-------VSQKSHGSRKQNKWFKKFFGSLDSLSIEQINEPQRQWHCPACQNG 234
Query: 261 PGAIDWYRGLQPLMTHAKTKGSKRVKLHXXXXXXXXXXXXXXGTSVIPAGEVFGKWKGLK 320
PGAIDWY L PL+ HA+TKG++RVKLH G SVIP GE++G+WKGL
Sbjct: 235 PGAIDWYN-LHPLLAHARTKGARRVKLHRELAEVLEKDLQMRGASVIPCGEIYGQWKGLG 293
Query: 321 DTEKDHEIVWPPMVIIMNTRLDKDENDKWTGMGNQELLEYFILYAAVRARHSYGPQGHRG 380
+ EKD+EIVWPPMVIIMNTRLDKD+NDKW GMGNQELLEYF Y A+RARHSYGPQGHRG
Sbjct: 294 EDEKDYEIVWPPMVIIMNTRLDKDDNDKWLGMGNQELLEYFDKYEALRARHSYGPQGHRG 353
Query: 381 MSVLIFESSAGGYLEAERLHKHFAEQGTDRDSWNNSNRRVLFHAGGKRQLYGFMALKEDL 440
MSVL+FESSA GYLEAERLH+ AE G DR +W +R +F +GG RQLYGF+A K+DL
Sbjct: 354 MSVLMFESSATGYLEAERLHRELAEMGLDRIAWGQ--KRSMF-SGGVRQLYGFLATKQDL 410
Query: 441 DVFNQHCHGKTKQKFEMRSYHEMVVNQIRQMSEDNQQLIYLKNRVVKEQRHSKALEATFS 500
D+FNQH GKT+ KFE++SY EMVV ++RQ+SEDNQQL Y KN++ K+ +H+K LE +
Sbjct: 411 DIFNQHSQGKTRLKFELKSYQEMVVKELRQISEDNQQLNYFKNKLSKQNKHAKVLEESLE 470
Query: 501 IVSEKLRETMEENRIVKQRTKMQHEQNKEEVKQS----IANPKNTEDYKLRAEEIAKFIT 556
I+SEKLR T E+NRIV+QRTKMQHEQN+EE+ + + K + + EE F
Sbjct: 471 IMSEKLRRTAEDNRIVRQRTKMQHEQNREEMDAHDRFFMDSIKQIHERRDAKEE--NFEM 528
Query: 557 VQDKEMEEFVAARDRLIKFHGEKMDAMRRRHWEEEVELEKGF-DAELTQLMEK 608
+Q +E + V + + I + D R+R EEV F + E+ + +E+
Sbjct: 529 LQQQERAKVVGQQQQNI--NPSSNDDCRKR--AEEVSSFIEFQEKEMEEFVEE 577
Score = 239 (89.2 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 55/178 (30%), Positives = 98/178 (55%)
Query: 438 EDLDVFNQHCHGKTKQKFEMRSYHEMVVNQIRQMSEDNQQLIYLKNRVVKEQRHSKALEA 497
+ L+ F + K + E++ ++R+ +EDN+ ++ + ++ EQ + ++A
Sbjct: 446 QQLNYFKNKLSKQNKHAKVLEESLEIMSEKLRRTAEDNR-IVRQRTKMQHEQNREE-MDA 503
Query: 498 TFSIVSEKLRETMEENRIVKQRTKMQHEQNKEEV---KQSIANPKNTEDYKLRAEEIAKF 554
+ +++ E ++ +M +Q + +V +Q NP + +D + RAEE++ F
Sbjct: 504 HDRFFMDSIKQIHERRDAKEENFEMLQQQERAKVVGQQQQNINPSSNDDCRKRAEEVSSF 563
Query: 555 ITVQDKEMEEFVAARDRLIKFHGEKMDAMRRRHWEEEVELEKGFDAELTQLMEKYSTH 612
I Q+KEMEEFV R+ LIK +KM+ M++RH EE +LEK FD L QLM K+ H
Sbjct: 564 IEFQEKEMEEFVEEREMLIKDQEKKMEDMKKRHHEEIFDLEKEFDEALEQLMYKHGLH 621
>TAIR|locus:2114560 [details] [associations]
symbol:IDN2 "AT3G48670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006306 "DNA methylation" evidence=IGI;IMP]
[GO:0006342 "chromatin silencing" evidence=IGI] GO:GO:0046686
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006342 GO:GO:0006306
InterPro:IPR005380 InterPro:IPR005381 Pfam:PF03468 Pfam:PF03470
InterPro:IPR005379 Pfam:PF03469 EMBL:AY065184 EMBL:BT000136
IPI:IPI00524938 RefSeq:NP_190436.2 RefSeq:NP_974403.1
UniGene:At.27894 PDB:4E8U PDBsum:4E8U ProteinModelPortal:Q8VZ79
SMR:Q8VZ79 PRIDE:Q8VZ79 EnsemblPlants:AT3G48670.1
EnsemblPlants:AT3G48670.2 GeneID:824027 KEGG:ath:AT3G48670
TAIR:At3g48670 eggNOG:NOG244769 HOGENOM:HOG000237495
InParanoid:Q8VZ79 OMA:GRYIISE PhylomeDB:Q8VZ79
ProtClustDB:CLSN2690591 Genevestigator:Q8VZ79 Uniprot:Q8VZ79
Length = 647
Score = 142 (55.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 54/250 (21%), Positives = 113/250 (45%)
Query: 319 LKDTEKDHEIVWPPMVIIMNTRLDKDENDKWTGMGNQELLEYFIL--YAAVRARHSYGPQ 376
++D + D ++V+P I++N K ++ + G +L + +IL + R R +
Sbjct: 118 IQDCDHDEKLVYPWKGIVVNIPTTKAQDGRSAGESGSKLRDEYILRGFNPTRVRPLWNYL 177
Query: 377 GHRGMSVLIFESSAGGYLEAERLHKHFAEQGTDRDSWNNSNRRVLFHAGGKRQLYGFMAL 436
GH G +++ F G K + G + W + G K LYG++A
Sbjct: 178 GHSGTAIVEFNKDWNGLHNGLLFDKAYTVDGHGKKDWLKKD-------GPKLGLYGWIAR 230
Query: 437 KEDLDVFNQHCHGKTKQKF-EMRSYHEMVVNQIRQMSEDNQQLIY--LKNRVVKEQRHSK 493
+D + + G+ +K ++++ E+ + R+ Q+L+ L+ V ++++ K
Sbjct: 231 ADDYN--GNNIIGENLRKTGDLKTIAELTEEEARK-----QELLVQNLRQLVEEKKKDMK 283
Query: 494 ALEATFSIVSEKLRETMEENRIVKQRTKMQHEQNKEEVKQSIANPKNTEDYKLRAEEIAK 553
+E S+ SE+L + MEE K + K E N + + K +D+ E++ +
Sbjct: 284 EIEELCSVKSEELNQLMEEKE--KNQQKHYRELNAIQERTMSHIQKIVDDH----EKLKR 337
Query: 554 FITVQDKEME 563
+ + K++E
Sbjct: 338 LLESERKKLE 347
>TAIR|locus:2125078 [details] [associations]
symbol:AT4G01180 "AT4G01180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 EMBL:CP002687 EMBL:AL161491 InterPro:IPR005380
Pfam:PF03468 InterPro:IPR005379 Pfam:PF03469
ProtClustDB:CLSN2685473 IPI:IPI00541233 PIR:E85015
RefSeq:NP_192027.1 UniGene:At.54071 ProteinModelPortal:Q9M150
PRIDE:Q9M150 EnsemblPlants:AT4G01180.1 GeneID:828058
KEGG:ath:AT4G01180 TAIR:At4g01180 InParanoid:Q9M150 OMA:VARADDH
PhylomeDB:Q9M150 ArrayExpress:Q9M150 Genevestigator:Q9M150
Uniprot:Q9M150
Length = 554
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 70/311 (22%), Positives = 137/311 (44%)
Query: 320 KDTEKDHEIVWPPMVIIMNTRLDKDENDKWTGMGNQELLEYFIL--YAAVRARHSYGPQG 377
+D +K + VWP + ++ N + + + + G L + F L + R + + +G
Sbjct: 26 QDQQKRY--VWPWVGLVANVPTEVEPSGRRVGKSGSTLRDEFTLKGFNPTRVKPIWNTKG 83
Query: 378 HRGMSVLIFESSAGGYLEAERLHKHFAEQGTDRDSWNNSNRRVLFHAGGKRQLYGFMALK 437
H G +++ F G+ A + K F + W +R +LYG++A +
Sbjct: 84 HTGFALVEFAKDFKGFESAMQFEKSFDLDRHGKRDWKKGHRL------RDDKLYGWLA-R 136
Query: 438 EDLDVFNQHCHGKT-KQKFEMRSYHEMVVNQIRQMSE--DNQQLIYLKNRVVKEQRHSKA 494
ED D GK K+K +++S ++V R++ +N KN+ K+Q K
Sbjct: 137 ED-DYNRSDTVGKNVKKKRDLKSISQIVEEDQRKLYHLFENMCQTIEKNKQRKQQLEQKV 195
Query: 495 LEATFSIVSEKLRETMEENRIVKQRTKMQHEQNKEEVKQSI--ANPKNTEDYKLRAEEI- 551
E S+ L M N ++ KM E+N +E Q + + K+ + + + E++
Sbjct: 196 DETLESLEFHNL---MLNNSYQEEIQKM--EKNMQEFYQQVLGGHEKSFAELEAKREKLD 250
Query: 552 --AKFITVQ----DKEMEEFVAARDRLIKFHGEKMDA------MRRRHWEEEVELEKGF- 598
A+ I + ++EME+ R+ + K E+ +A + +H +E+ +L K
Sbjct: 251 ERARLIEQRAIKNEEEMEKTRLEREMIQKAMCEQNEANEEAMKLAEKHQKEKEKLHKRIM 310
Query: 599 --DAELTQLME 607
+A+L + E
Sbjct: 311 EMEAKLNETQE 321
>TAIR|locus:2148323 [details] [associations]
symbol:AT5G59390 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688 EMBL:AB025604
InterPro:IPR005380 Pfam:PF03468 InterPro:IPR005379 Pfam:PF03469
HOGENOM:HOG000237495 IPI:IPI00523049 RefSeq:NP_200747.1
UniGene:At.55622 ProteinModelPortal:Q9LTJ0 PRIDE:Q9LTJ0
EnsemblPlants:AT5G59390.1 GeneID:836058 KEGG:ath:AT5G59390
TAIR:At5g59390 InParanoid:Q9LTJ0 OMA:NANEELM PhylomeDB:Q9LTJ0
ProtClustDB:CLSN2685473 Genevestigator:Q9LTJ0 Uniprot:Q9LTJ0
Length = 561
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 66/310 (21%), Positives = 131/310 (42%)
Query: 323 EKDHEIVWPPMVIIMNTRLDKDENDKWTGMGNQELLEYFIL--YAAVRARHSYGPQGHRG 380
++ VWP + ++ N + + + + G L + F + + R + + +GH G
Sbjct: 29 QQQQRFVWPWVGLVANIPTEVEPSGRRVGKSGSTLRDEFTMKGFNPTRVQPIWDFKGHSG 88
Query: 381 MSVLIFESSAGGYLEAERLHKHFAEQGTDRDSWNNSNRRVLFHAGGKRQLYGFMALKEDL 440
+++ F G+ A + F + W +R +LYG++A +ED
Sbjct: 89 FALVEFAKDFEGFESAMNFERSFNLDRHGKRDWEKGHRL------RDNKLYGWVA-RED- 140
Query: 441 DVFNQHCHGKT-KQKFEMRSYHEMVVNQIRQMSE--DNQQLIYLKNRVVKEQRHSKALEA 497
D GK K+K +++S ++V R+M +N K + K++ K E
Sbjct: 141 DYNRSDTVGKNVKKKRDLKSISQIVEEDERKMVHLVENMSQTIEKKKQSKQELEQKVDET 200
Query: 498 TFSIVSEKLRETMEENRIVK--QRTKMQHEQNKEEV----KQSIANPK-NTEDYKLRAEE 550
+ + S +L + + Q+ +M+ E+ ++V ++S+A + E RA
Sbjct: 201 SRFLESLELHNVLLNKNYQEGFQKMQMKMEELYQQVLDGHEKSLAELEAKREKLDERARL 260
Query: 551 IAKFITVQDKEMEEFVAARDRLIKFHGEKMDAMRRRHWEEEVELEKGFDAELTQLMEKYS 610
I + + ++EME + RL + +K + EE ++L + A + L EK
Sbjct: 261 IEQRAIINEEEME-----KSRLEREMNQKAMCEQNEANEEAMKLAEKHQAS-SSLKEKEK 314
Query: 611 TH--ITEVAA 618
H I E+ A
Sbjct: 315 LHKRIMEMEA 324
>UNIPROTKB|F1NGZ3 [details] [associations]
symbol:F1NGZ3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010457 "centriole-centriole
cohesion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0030997 "regulation of centriole-centriole
cohesion" evidence=IEA] [GO:0031616 "spindle pole centrosome"
evidence=IEA] InterPro:IPR026048 GO:GO:0043234 GO:GO:0008104
GO:GO:0005814 GO:GO:0000278 GeneTree:ENSGT00700000104019
GO:GO:0030997 GO:GO:0010457 PANTHER:PTHR23159:SF1 EMBL:AADN02019503
EMBL:AADN02019504 EMBL:AADN02019505 IPI:IPI00570644
Ensembl:ENSGALT00000002729 Uniprot:F1NGZ3
Length = 2417
Score = 132 (51.5 bits), Expect = 0.00020, P = 0.00020
Identities = 51/201 (25%), Positives = 99/201 (49%)
Query: 428 RQLYGFMALKEDLDV------FNQHCHGKTKQKFEMRSYHEMVVNQIRQMSEDNQQLIYL 481
R+ ALKE+L F QH H + ++K + + + +MS +QQ +L
Sbjct: 364 RRQKAIQALKEELSTRQDSISFLQHQHRQQEEKCKKLQQRLEQLEEENKMSNSHQQ--HL 421
Query: 482 KNRVVKEQRHSKALEATFSIVSEKLRETMEE-NRIVKQRTKMQHEQNK---EEVKQSIAN 537
K+ V+ + + LE + +KL + +E +R+ + T++Q +++ E+V+Q +A
Sbjct: 422 KSLVLALKCDCENLEKIRGELQQKLELSEQEASRLRQSNTELQLKEDSAQGEKVEQQLAM 481
Query: 538 PKNTEDYKLRAEEIAKFITVQDKEMEEFVAARDRLIKFHGEKMDAMRRRHWEEEVELEKG 597
+ D++L +++A E VAAR++L + H ++ D +++ E V LEK
Sbjct: 482 ERAHHDHELVLKDLAALEEKHSLLQNELVAAREKLEESHLQR-DLLKQEKHELTVALEKA 540
Query: 598 FD--AELTQLMEKYSTHITEV 616
A LT K ++ I ++
Sbjct: 541 EKSVAALTGAQNKLNSEIADL 561
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 621 573 0.00080 120 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 626 (67 KB)
Total size of DFA: 349 KB (2172 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.81u 0.11s 58.92t Elapsed: 00:00:03
Total cpu time: 58.81u 0.11s 58.92t Elapsed: 00:00:03
Start: Sat May 11 11:51:59 2013 End: Sat May 11 11:52:02 2013