BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007025
(621 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/337 (67%), Positives = 267/337 (79%), Gaps = 5/337 (1%)
Query: 262 RQRHNQQIFFDVNEQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ 321
R++ Q FFDV + EV LG LKRF +ELQ A+ NFS+KN++G+GGFG VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 322 DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNG 381
DGT+VAVKRLK+ GGE+QFQTEVEMIS+AVHRNLLRL GFCMT TERLLVYPYM+NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 382 SVAS----RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 437
SVAS R +++P LDW R+RIALG+ARGL YLH+ CDPKIIHRDVKAANILLDE +E
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 438 AVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGL 497
AVVGDFGLAKL+D+ D HV AVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELI+G
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 498 RALEFGKTANQKGAM-LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYL 556
RA + + AN M LDWVK + +EKKLE LVD DL+ NY E+E+++QVALLCTQ
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 557 PSLRPKMSEVVRMLEGDGLAEKWAASQKAEATRSRAN 593
P RPKMSEVVRMLEGDGLAE+W QK E R N
Sbjct: 301 PMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFN 337
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/326 (68%), Positives = 259/326 (79%), Gaps = 5/326 (1%)
Query: 270 FFDVNEQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVK 329
FFDV + EV LG LKRF +ELQ A+ NF +KN++G+GGFG VYKG L DG +VAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 330 RLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS---- 385
RLK+ GGE+QFQTEVEMIS+AVHRNLLRL GFCMT TERLLVYPYM+NGSVAS
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
R +++P LDW R+RIALG+ARGL YLH+ CDPKIIHRDVKAANILLDE +EAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKT 505
AKL+D+ D HV AVRG +GHIAPEYLSTG+SSEKTDVFG+G++LLELI+G RA + +
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 506 ANQKGAM-LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 564
AN M LDWVK + +EKKLE LVD DL+ NY E+E+++QVALLCTQ P RPKMS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 565 EVVRMLEGDGLAEKWAASQKAEATRS 590
EVVRMLEGDGLAE+W QK E R
Sbjct: 301 EVVRMLEGDGLAERWEEWQKEEMFRQ 326
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 162/289 (56%), Gaps = 10/289 (3%)
Query: 288 RFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEV 347
R +L+ AT+NF K L+G G FG VYKG L+DG VA+KR + + G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKP----SLDWATRKRIAL 403
E +S H +L+ LIGFC E +L+Y YM NG++ L S+ W R I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRG 462
GAARGL YLH + IIHRDVK+ NILLDE + + DFG++K D +H+ V+G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
T+G+I PEY G+ +EK+DV+ FG++L E++ A+ + + +W + H
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNN 262
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+LE +VD +L + L + A+ C RP M +V+ LE
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 162/289 (56%), Gaps = 10/289 (3%)
Query: 288 RFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEV 347
R +L+ AT+NF K L+G G FG VYKG L+DG VA+KR + + G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKP----SLDWATRKRIAL 403
E +S H +L+ LIGFC E +L+Y YM NG++ L S+ W R I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-LDHCDSHVTTAVRG 462
GAARGL YLH + IIHRDVK+ NILLDE + + DFG++K + +H+ V+G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
T+G+I PEY G+ +EK+DV+ FG++L E++ A+ + + +W + H
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNN 262
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+LE +VD +L + L + A+ C RP M +V+ LE
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 173/310 (55%), Gaps = 21/310 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAV 328
E + EV F F EL++ T+NF + N +G+GGFG VYKGY+ + T VAV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 329 KRLKDGNAIGGE---IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS 385
K+L I E QF E+++++ H NL+ L+GF + LVY YM NGS+
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 386 RLK---AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 442
RL P L W R +IA GAA G+ +LHE IHRD+K+ANILLDE + A + D
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 443 FGLAKLLDHCDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501
FGLA+ + V + + GT ++APE L G+ + K+D++ FG++LLE+I+GL A++
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 502 FGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP 561
+ + + + +EK +E +DK + N+ D +E M VA C + RP
Sbjct: 236 --EHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 562 KMSEVVRMLE 571
+ +V ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 172/310 (55%), Gaps = 21/310 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAV 328
E + EV F F EL++ T+NF + N +G+GGFG VYKGY+ + T VAV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 329 KRLKDGNAIGGE---IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS 385
K+L I E QF E+++++ H NL+ L+GF + LVY YM NGS+
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 386 RLK---AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 442
RL P L W R +IA GAA G+ +LHE IHRD+K+ANILLDE + A + D
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 443 FGLAKLLDHCDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501
FGLA+ + V + GT ++APE L G+ + K+D++ FG++LLE+I+GL A++
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 502 FGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP 561
+ + + + +EK +E +DK + N+ D +E M VA C + RP
Sbjct: 236 --EHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 562 KMSEVVRMLE 571
+ +V ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 170/300 (56%), Gaps = 24/300 (8%)
Query: 288 RFH---FKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG 338
RFH F EL++ T+NF + N +G+GGFG VYKGY+ + T VAVK+L I
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 63
Query: 339 GE---IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPS 392
E QF E+++++ H NL+ L+GF + LVY YM NGS+ RL P
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 393 LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452
L W R +IA GAA G+ +LHE IHRD+K+ANILLDE + A + DFGLA+ +
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 453 DSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 511
V + GT ++APE L G+ + K+D++ FG++LLE+I+GL A++ + +
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLL 237
Query: 512 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ + +EK +E +DK + N+ D +E M VA C + RP + +V ++L+
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 165/300 (55%), Gaps = 24/300 (8%)
Query: 288 RFH---FKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG 338
RFH F EL++ T+NF + N G+GGFG VYKGY+ + T VAVK+L I
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDIT 60
Query: 339 GE---IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPS 392
E QF E+++ + H NL+ L+GF + LVY Y NGS+ RL P
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 393 LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452
L W R +IA GAA G+ +LHE IHRD+K+ANILLDE + A + DFGLA+ +
Sbjct: 121 LSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 453 DSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 511
V + + GT + APE L G+ + K+D++ FG++LLE+I+GL A++ + +
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLL 234
Query: 512 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ + +EK +E +DK N+ D +E VA C + RP + +V ++L+
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 84
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 141
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 241
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 242 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 85
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 142
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 242
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 243 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 239
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 233
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 78
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 135
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 196 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 235
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 236 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 86
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 143
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 243
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 244 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 233
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 77
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 134
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 195 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 234
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 235 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 239
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 199 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 238
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 239 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 233
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 71
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 128
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 228
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 229 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G G V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 233
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY T VAVK LK G+ F E ++ H+ L+RL + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRL--YAV 72
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
T E + ++ YM NGS+ LK + K + + A A G+ ++ E+ IHR
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 129
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
+++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE-- 541
+ FGILL E+++ R G T + V ++L+ Y +
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPE--------------------VIQNLERGYRMVRPD 229
Query: 542 --LEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
EE+ Q+ LC + P RP + +LE
Sbjct: 230 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNL 358
+ + K +G G FG V++ G+ VAVK L + + + +F EV ++ H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPSLDWATRKRIALGAARGLLYLHEQ 415
+ +G +V Y+S GS+ L A+ LD R +A A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+P I+HRD+K+ N+L+D+ Y V DFGL++ L + GT +APE L
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 476 QSSEKTDVFGFGILLLELIS 495
S+EK+DV+ FG++L EL +
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNL 358
+ + K +G G FG V++ G+ VAVK L + + + +F EV ++ H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPSLDWATRKRIALGAARGLLYLHEQ 415
+ +G +V Y+S GS+ L A+ LD R +A A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+P I+HR++K+ N+L+D+ Y V DFGL++L +A GT +APE L
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRDE 214
Query: 476 QSSEKTDVFGFGILLLELIS 495
S+EK+DV+ FG++L EL +
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY + VA+K +K+G+ E F E E++ H L++L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM--SEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWA-TRKRIALGAARGLLYLHEQCDPKIIHRDV 425
LV+ +M +G ++ L+ + L A T + L G+ YL E C +IHRD+
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
A N L+ E V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 486 FGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD----RIE 541
FG+L+ E+ S KI E + V +D+ + R+
Sbjct: 210 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 249
Query: 542 LEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ Q+ C + P RP S ++R L
Sbjct: 250 STHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 152
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 171
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 232 KFTTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 170
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 231 KFTTKSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 144
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 205 KFTTKSDVWSFGVLLWELMT 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY + VA+K +++G E F E E++ H L++L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWA-TRKRIALGAARGLLYLHEQCDPKIIHRDV 425
LV+ +M +G ++ L+ + L A T + L G+ YL E C +IHRD+
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
A N L+ E V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 486 FGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD----RIE 541
FG+L+ E+ S KI E + V +D+ + R+
Sbjct: 193 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 232
Query: 542 LEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ Q+ C + P RP S ++R L
Sbjct: 233 STHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 147
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 208 KFTTKSDVWSFGVLLWELMT 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 151
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 150
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 149
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 210 KFTTKSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 152
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + ++ H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY + VA+K +++G E F E E++ H L++L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWA-TRKRIALGAARGLLYLHEQCDPKIIHRDV 425
LV+ +M +G ++ L+ + L A T + L G+ YL E C +IHRD+
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
A N L+ E V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 486 FGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD----RIE 541
FG+L+ E+ S KI E + V +D+ + R+
Sbjct: 190 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 542 LEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ Q+ C + P RP S ++R L
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY + VA+K +++G E F E E++ H L++L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWA-TRKRIALGAARGLLYLHEQCDPKIIHRDV 425
LV+ +M +G ++ L+ + L A T + L G+ YL E C +IHRD+
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
A N L+ E V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 486 FGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD----RIE 541
FG+L+ E+ S KI E + V +D+ + R+
Sbjct: 188 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 227
Query: 542 LEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ Q+ C + P RP S ++R L
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 151
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL---DHCDSHVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + + H T + V +A E L T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 153
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAK-LLD-HCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ +LD DS H T + V +A E L T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGE------IQFQTEVEM 349
A + + +GKGGFG V+KG L +D +VVA+K L G++ G +FQ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL--KAKPSLDWATRKRIALGAAR 407
+S H N+++L G M R +V ++ G + RL KA P + W+ + R+ L A
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIAL 133
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLLDHCDSHVTTAVRG 462
G+ Y+ Q +P I+HRD+++ NI L E A V DFGL++ H + + G
Sbjct: 134 GIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLG 188
Query: 463 TVGHIAPEYLSTGQSS--EKTDVFGFGILLLELISG---LRALEFGKTANQKGAMLDWVK 517
+APE + + S EK D + F ++L +++G +GK
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI------------ 236
Query: 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
K + M+ ++ L+ + V LC P RP S +V+ L
Sbjct: 237 -----KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY + VA+K +++G E F E E++ H L++L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWA-TRKRIALGAARGLLYLHEQCDPKIIHRDV 425
LV +M +G ++ L+ + L A T + L G+ YL E C +IHRD+
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
A N L+ E V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 486 FGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD----RIE 541
FG+L+ E+ S KI E + V +D+ + R+
Sbjct: 191 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 230
Query: 542 LEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ Q+ C + P RP S ++R L
Sbjct: 231 STHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 150
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + DS H T + V +A E L T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 211
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + DS H T + V +A E L T
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 272 KFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 157
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + DS H T + V +A E L T
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 218 KFTTKSDVWSFGVLLWELMT 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 152
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + DS H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 153
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + DS H T + V +A E L T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG V+ GY + T VAVK LK G +Q F E ++ H L+RL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
++ YM+ GS+ LK+ K I A A G+ Y+ + IHR
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AAN+L+ E + DFGLA++++ + + + APE ++ G + K+DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 484 FGFGILLLELIS 495
+ FGILL E+++
Sbjct: 195 WSFGILLYEIVT 206
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 306 LVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHEQCDP 418
+G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 152
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDS-HVTTAVRGTVGHIAPEYLSTG 475
K +HRD+ A N +LDE + V DFGLA+ + DS H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 476 QSSEKTDVFGFGILLLELIS 495
+ + K+DV+ FG+LL EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 100/230 (43%), Gaps = 9/230 (3%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKD 333
E EE K K+ Q A +F +GKG FGNVY Q ++A+K L
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 334 GN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKP 391
G E Q + EVE+ S H N+LRL G+ T L+ Y G+V L+
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 392 SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451
D A L Y H + ++IHRD+K N+LL E + DFG + H
Sbjct: 130 KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---H 183
Query: 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501
S T + GT+ ++ PE + EK D++ G+L E + G E
Sbjct: 184 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ GY + VA+K +++G E F E E++ H L++L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWA-TRKRIALGAARGLLYLHEQCDPKIIHRDV 425
LV+ +M +G ++ L+ + L A T + L G+ YL E +IHRD+
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
A N L+ E V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 486 FGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD----RIE 541
FG+L+ E+ S KI E + V +D+ + R+
Sbjct: 190 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 542 LEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ Q+ C + P RP S ++R L
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGE------IQFQTEVEM 349
A + + +GKGGFG V+KG L +D +VVA+K L G++ G +FQ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL--KAKPSLDWATRKRIALGAAR 407
+S H N+++L G M R +V ++ G + RL KA P + W+ + R+ L A
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIAL 133
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLLDHCDSHVTTAVRG 462
G+ Y+ Q +P I+HRD+++ NI L E A V DFG ++ H + + G
Sbjct: 134 GIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHSVSGLLG 188
Query: 463 TVGHIAPEYLSTGQSS--EKTDVFGFGILLLELISG---LRALEFGKTANQKGAMLDWVK 517
+APE + + S EK D + F ++L +++G +GK
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI------------ 236
Query: 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
K + M+ ++ L+ + V LC P RP S +V+ L
Sbjct: 237 -----KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLP 175
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGE------IQFQTEVEM 349
A + + +GKGGFG V+KG L +D +VVA+K L G++ G +FQ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL--KAKPSLDWATRKRIALGAAR 407
+S H N+++L G M R +V ++ G + RL KA P + W+ + R+ L A
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIAL 133
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLLDHCDSHVTTAVRG 462
G+ Y+ Q +P I+HRD+++ NI L E A V DF L++ H + + G
Sbjct: 134 GIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLG 188
Query: 463 TVGHIAPEYLSTGQSS--EKTDVFGFGILLLELISG---LRALEFGKTANQKGAMLDWVK 517
+APE + + S EK D + F ++L +++G +GK
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI------------ 236
Query: 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
K + M+ ++ L+ + V LC P RP S +V+ L
Sbjct: 237 -----KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 191
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDYLP 179
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 174
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVG 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 175
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGYLQDGT-VVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY ++ ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ +T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + K+IHRD+K N+LL E + DFG + H S A+ GT+ ++ PE
Sbjct: 124 CHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 179
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 123 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 176
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVG 201
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S A+ GT+ ++ PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 180
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 99/230 (43%), Gaps = 9/230 (3%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKD 333
E EE K K+ Q A +F +GKG FGNVY Q ++A+K L
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 334 GN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKP 391
G E Q + EVE+ S H N+LRL G+ T L+ Y G+V L+
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 392 SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451
D A L Y H + ++IHRD+K N+LL E + DFG + H
Sbjct: 130 KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---H 183
Query: 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501
S + GT+ ++ PE + EK D++ G+L E + G E
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 29/282 (10%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGT-----VVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
S + + ++G G FG VYKG L+ + VA+K LK G + F E ++
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLY 411
H N++RL G +++ YM NG++ L+ K +++ + + + G A G+ Y
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKY 162
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAP 469
L + +HRD+ A NIL++ V DFGL+++L D ++ T+ + + AP
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 470 EYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
E +S + + +DV+ FGI++ E+++ +G+ + + + +K I+ +L +
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMT------YGERPYWELSNHEVMKAINDGFRLPTPM 273
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
D + Q+ + C Q + RPK +++V +L+
Sbjct: 274 DCP----------SAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG V+ GY + T VAVK LK G +Q F E ++ H L+RL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
++ +M+ GS+ LK+ K I A A G+ Y+ + IHR
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AAN+L+ E + DFGLA++++ + + + APE ++ G + K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 484 FGFGILLLELIS 495
+ FGILL E+++
Sbjct: 194 WSFGILLYEIVT 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S A+ GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + +FG + H S T + GT+ ++
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLP 176
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 127
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 121 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 174
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVG 199
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 176
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTLDYLP 175
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + +FG + H S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS 351
L+ + + + ++G GGFG VY+ + + D V R I I+ + E ++ +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK---PSL--DWATRKRIALGAA 406
+ H N++ L G C+ LV + G + L K P + +WA + A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IA 115
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYE--------AVVGDFGLAKLLDHCDSHVTT 458
RG+ YLH++ IIHRD+K++NIL+ + E + DFGLA+ + H TT
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTT 170
Query: 459 --AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ G +APE + S+ +DV+ +G+LL EL++G
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 348
K+ Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ S H N+LRL G+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 177
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + EK D++ G+L E + G
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGLA++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
+ EK D++ G+L E + G+ E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEM 177
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L A + + IA ARG+ YLH + IIHRD
Sbjct: 78 -TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S S +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 194 SDVYAFGIVLYELMTG 209
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L + VA+K LK G F E
Sbjct: 11 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 127
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 128 ASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 183
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 237
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 238 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 38 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 154
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 155 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 210
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 264
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 265 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL ++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L + VA+K LK G F E
Sbjct: 28 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V YM NGS+ S L+ K + + + + G
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 144
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 145 ASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 200
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 254
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 255 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q A +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEM 180
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
+ EK D++ G+L E + G
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G FG V+ G L+ D T+VAVK ++ + +F E ++ H N++RLIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
+V + G + L+ + + L T ++ AA G+ YL +C IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT-VGHIAPEYLSTGQSSEKTDV 483
+ A N L+ E + DFG+++ + +R V APE L+ G+ S ++DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 484 FGFGILLLELISGLRALEFGKTANQK 509
+ FGILL E S L A + +NQ+
Sbjct: 299 WSFGILLWETFS-LGASPYPNLSNQQ 323
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 39/302 (12%)
Query: 289 FHFKELQSATSNFSSK---------NLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGN 335
F F++ A F+ + ++G G FG V G+L+ VA+K LK G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 336 AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW 395
F +E ++ H N++ L G +T +++ +M NGS+ S L+ +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QF 132
Query: 396 ATRKRIAL--GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DH 451
+ + + G A G+ YL D +HRD+ A NIL++ V DFGL++ L D
Sbjct: 133 TVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 452 CDSHVTTAVRGTVG--HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 509
D T+A+ G + APE + + + +DV+ +GI++ E++S +G+
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------YGERPYWD 243
Query: 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569
D + I Q+ +L +D + Q+ L C Q + RPK ++V
Sbjct: 244 MTNQDVINAIEQDYRLPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQIVNT 293
Query: 570 LE 571
L+
Sbjct: 294 LD 295
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G FG V+ G L+ D T+VAVK ++ + +F E ++ H N++RLIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
+V + G + L+ + + L T ++ AA G+ YL +C IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG----TVGHIAPEYLSTGQSSEK 480
+ A N L+ E + DFG+++ + D V A G V APE L+ G+ S +
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR--EEADG-VYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 481 TDVFGFGILLLELISGLRALEFGKTANQK 509
+DV+ FGILL E S L A + +NQ+
Sbjct: 296 SDVWSFGILLWETFS-LGASPYPNLSNQQ 323
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 42/294 (14%)
Query: 284 GNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQF 343
G+L +KE++ + +VG+G FG V K + VA+K+++ + F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESE---RKAF 49
Query: 344 QTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI-- 401
E+ +S H N+++L G C+ LV Y GS+ + L L + T
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 402 -ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCD--SHVT 457
L ++G+ YLH +IHRD+K N+LL + + DFG A CD +H+T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMT 162
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRAL-EFGKTANQKGAMLDWV 516
+G+ +APE SEK DVF +GI+L E+I+ + E G A + + W
Sbjct: 163 NN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWA 217
Query: 517 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+H + + +KN IE + C PS RP M E+V+++
Sbjct: 218 --VHNGTRPPL-----IKNLPKPIE-----SLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 351
Q +F +GKG FGNVY Q ++A+K L G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
H N+LRL G+ T L+ Y G+V L+ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEM 181
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
+ EK D++ G+L E + G+ E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HRD+ A N ++ + +GDFG+ + + D +G V +A
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWMA 200
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 245
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P++RP E+V +L+ D
Sbjct: 246 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L A + + IA ARG+ YLH + IIHRD
Sbjct: 90 -TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDH-CDSHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA SH + G++ +APE + S S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 206 SDVYAFGIVLYELMTG 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HRD+ A N ++ + +GDFG+ + + D +G V +A
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG-KGLLPVRWMA 200
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 245
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P +RP E+V +L+ D
Sbjct: 246 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HRD+ A N ++ + +GDFG+ + + D + +G V +A
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 200
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 245
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P +RP E+V +L+ D
Sbjct: 246 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L A + + IA ARG+ YLH + IIHRD
Sbjct: 90 -TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDH-CDSHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA SH + G++ +APE + S S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 206 SDVYAFGIVLYELMTG 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 299 SNFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
S+ ++GKG FG K + + G V+ +K L + + F EV+++ H N
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE-ETQRTFLKEVKVMRCLEHPN 68
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQC 416
+L+ IG + Y+ G++ +K+ S W+ R A A G+ YLH
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM- 127
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-------------LDHCDSHVTTAVRGT 463
IIHRD+ + N L+ E VV DFGLA+L L D V G
Sbjct: 128 --NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 464 VGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRA 499
+APE ++ EK DVF FGI+L E+I + A
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HRD+ A N ++ + +GDFG+ + + D +G V +A
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG-KGLLPVRWMA 197
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 242
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P +RP E+V +L+ D
Sbjct: 243 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 121/276 (43%), Gaps = 37/276 (13%)
Query: 301 FSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
F+ +GKG FG V+KG + VVA+K + A Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
+ G + T+ ++ Y+ GS L+ P LD I +GL YLH + K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 124
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE 479
IHRD+KAAN+LL E+ E + DFG+A L T V GT +APE +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 183
Query: 480 KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE---KKLEMLVDKD---- 532
K D++ GI +EL G + H E K+ L+ K+
Sbjct: 184 KADIWSLGITAIELARG--------------------EPPHSELHPMKVLFLIPKNNPPT 223
Query: 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 568
L+ NY + L+E V+ C PS RP E+++
Sbjct: 224 LEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 121/276 (43%), Gaps = 37/276 (13%)
Query: 301 FSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
F+ +GKG FG V+KG + VVA+K + A Q E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
+ G + T+ ++ Y+ GS L+ P LD I +GL YLH + K
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 144
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE 479
IHRD+KAAN+LL E+ E + DFG+A L T V GT +APE +
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 480 KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE---KKLEMLVDKD---- 532
K D++ GI +EL G + H E K+ L+ K+
Sbjct: 204 KADIWSLGITAIELARG--------------------EPPHSELHPMKVLFLIPKNNPPT 243
Query: 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 568
L+ NY + L+E V+ C PS RP E+++
Sbjct: 244 LEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 275
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HRD+ A N ++ + +GDFG+ + + D + +G V +A
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 199
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 244
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P +RP E+V +L+ D
Sbjct: 245 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 46/289 (15%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
YL+ + K +HRD+ A N ++ + +GDFG+ + D + T R V
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPV 196
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+APE L G + +D++ FG++L E+ S A Q + + E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQV 241
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
L+ ++D + D E + + +C Q+ P +RP E+V +L+ D
Sbjct: 242 LKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 128
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 189 WSFGILLTELTTKGRV 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 62
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 123 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 224
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 225 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V M NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIG 363
+ +VG+G FG V K + VA+K+++ + F E+ +S H N+++L G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYG 68
Query: 364 FCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI---ALGAARGLLYLHEQCDPKI 420
C+ LV Y GS+ + L L + T L ++G+ YLH +
Sbjct: 69 ACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 421 IHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCD--SHVTTAVRGTVGHIAPEYLSTGQS 477
IHRD+K N+LL + + DFG A CD +H+T +G+ +APE
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNN-KGSAAWMAPEVFEGSNY 180
Query: 478 SEKTDVFGFGILLLELISGLRAL-EFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 536
SEK DVF +GI+L E+I+ + E G A + + W +H + + +KN
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWA--VHNGTRPPL-----IKNL 229
Query: 537 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
IE + C PS RP M E+V+++
Sbjct: 230 PKPIE-----SLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HR++ A N ++ + +GDFG+ + + D + +G V +A
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 201
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 246
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P++RP E+V +L+ D
Sbjct: 247 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 228
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 228
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L+ VA+K LK G F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V M NGS+ S L+ K + + + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 156
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 266
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 267 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 38/285 (13%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA----------KPSLDWATRKRIALGAARGLL 410
L+G L+V M++G + S L++ +P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--TVGHIA 468
YL+ + K +HR++ A N ++ + +GDFG+ + + D + +G V +A
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 200
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528
PE L G + +D++ FG++L E+ S A Q + + E+ L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQP------YQGLSNEQVLKFV 245
Query: 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573
+D + D E + + +C Q+ P++RP E+V +L+ D
Sbjct: 246 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + +N S +VG G FG V G L + VA+K LK G F E
Sbjct: 11 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++RL G + ++V M NGS+ S L+ K + + + + G
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGI 127
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
A G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 128 ASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 183
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ +PE ++ + + +DV+ +GI+L E++S +G+ + + D +K + +
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------YGERPYWEMSNQDVIKAVDEG 237
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 238 YRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 122/274 (44%), Gaps = 33/274 (12%)
Query: 301 FSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
F+ +GKG FG V+KG + VVA+K + A Q E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
+ G + T+ ++ Y+ GS L+ P LD I +GL YLH + K
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 139
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT-TAVRGTVGHIAPEYLSTGQSS 478
IHRD+KAAN+LL E+ E + DFG+A L D+ + GT +APE +
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD----LK 534
K D++ GI +EL G ++H K L L+ K+ L+
Sbjct: 198 SKADIWSLGITAIELARGEPPHS----------------ELHPMKVL-FLIPKNNPPTLE 240
Query: 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 568
NY + L+E V+ C PS RP E+++
Sbjct: 241 GNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 270
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 62
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 123 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 224
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 225 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 228
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK GN F E +++ H L++L + +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 305
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGL +L++ + + + APE G+ + K+DV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 366 WSFGILLTELTTKGRV 381
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 225
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 226 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 131
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 192 WSFGILLTELTTKGRV 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 304
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 365 WSFGILLTELTTKGRV 380
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 387
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 484 FGFGILLLELISGLR 498
+ FGILL EL + R
Sbjct: 448 WSFGILLTELTTKGR 462
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 303 SKNLVGKGGFGNVYKG-YL---QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
S ++GKG FG VY G Y+ Q+ A+K L + F E ++ H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 359 LRLIGFCMTTTERL--LVYPYMSNGSVASRLKAKPSLDWATRKRIALG--AARGLLYLHE 414
L LIG M E L ++ PYM +G + +++ P + + I+ G ARG+ YL E
Sbjct: 85 LALIGI-MLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLD--HCDSHVTTAVRGTVGHIAPEY 471
Q K +HRD+ A N +LDE + V DFGLA+ +LD + R V A E
Sbjct: 143 Q---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 472 LSTGQSSEKTDVFGFGILLLELIS 495
L T + + K+DV+ FG+LL EL++
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 304
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 365 WSFGILLTELTTKGRV 380
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 24/276 (8%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++ + K+ +G G FG VY+G + ++ VAVK LK+ E F E ++ H N
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 68
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
L++L+G C ++ +M+ G++ L+ + + +A + + YL ++
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
IHRD+ A N L+ E + V DFGL++L+ + + APE L+
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 476 QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535
+ S K+DV+ FG+LL E+ + + G +Q + L++KD +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------------VYELLEKDYRM 229
Query: 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
E++ ++ C Q+ PS RP +E+ + E
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 65
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 126 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 227
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 228 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 228
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 223
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 224 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 301 FSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
F+ +GKG FG V+KG + VVA+K + A Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
+ G + T+ ++ Y+ GS L+ P LD I +GL YLH + K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 124
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT-TAVRGTVGHIAPEYLSTGQSS 478
IHRD+KAAN+LL E+ E + DFG+A L D+ + GT +APE +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE---KKLEMLVDKD--- 532
K D++ GI +EL G + H E K+ L+ K+
Sbjct: 183 SKADIWSLGITAIELARG--------------------EPPHSELHPMKVLFLIPKNNPP 222
Query: 533 -LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 568
L+ NY + L+E V+ C PS RP E+++
Sbjct: 223 TLEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 223
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 224 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 225
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 226 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 127
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 188 WSFGILLTELTTKGRV 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 129
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 190 WSFGILLTELTTKGRV 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 74
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 134
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 135 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 191
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 236
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 237 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 63
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 225
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 226 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 304
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 365 WSFGILLTELTTKGRV 380
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + + +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 223
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 224 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 24/276 (8%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E ++ H N
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 68
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
L++L+G C ++ +M+ G++ L+ + + +A + + YL ++
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
IHRD+ A N L+ E + V DFGL++L+ + + APE L+
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 476 QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535
+ S K+DV+ FG+LL E+ + + G +Q + L++KD +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------------VYELLEKDYRM 229
Query: 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
E++ ++ C Q+ PS RP +E+ + E
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KE+++ S + + ++G G FG V G L+ VA+K LK G F E
Sbjct: 17 KEIEA--SCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++ L G + ++V YM NGS+ + LK K + + + + G
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK-KNDGQFTVIQLVGMLRGI 133
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG--- 462
+ G+ YL D +HRD+ A NIL++ V DFGL+++L+ D RG
Sbjct: 134 SAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKI 189
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
+ APE ++ + + +DV+ +GI++ E++S +G+ + D +K + +
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS------YGERPYWEMTNQDVIKAVEEG 243
Query: 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK E+V ML+
Sbjct: 244 YRLPSPMDCPAA----------LYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 66
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + + +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 126
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 228
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 229 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + + +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 223
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 224 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + + +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 223
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 224 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 291 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQ-FQTEVE 348
+ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E++ F E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAA 307
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHR++ A N L+ E + V DFGL++L+ + +
Sbjct: 368 SAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 469
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 470 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVE 348
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 61
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAA 406
++ H NL++L+G C ++ +M+ G++ L+ + + +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ YL ++ IHRD+ A N L+ E + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 223
Query: 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 224 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 30/278 (10%)
Query: 304 KNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ ++G G FG V +G L+ + VA+K LK G +F +E ++ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCD 417
RL G + +++ +M NG++ S L+ + + + + G A G+ YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG-QFTVIQLVGMLRGIASGMRYLAEM-- 135
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH--CDSHVTTAVRGTVG--HIAPEYLS 473
+HRD+ A NIL++ V DFGL++ L+ D T+++ G + APE ++
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533
+ + +D + +GI++ E++S FG+ + D + I Q+ +L D
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS------FGERPYWDMSNQDVINAIEQDYRLPPPPDCPT 248
Query: 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ Q+ L C Q + RP+ +VV L+
Sbjct: 249 S----------LHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVE 348
++ E++++ S++ +G G FG VYKG VAVK LK + + Q F+ EV
Sbjct: 29 YYWEIEASEVMLSTR--IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVA 84
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAAR 407
++ H N+L +G+ MT +V + S+ L + + IA A+
Sbjct: 85 VLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGH 466
G+ YLH + IIHRD+K+ NI L E +GDFGLA + S G+V
Sbjct: 144 GMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 467 IAPEYLSTGQS---SEKTDVFGFGILLLELISG 496
+APE + + S ++DV+ +GI+L EL++G
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 30/278 (10%)
Query: 304 KNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ ++G G FG V +G L+ + VA+K LK G +F +E ++ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCD 417
RL G + +++ +M NG++ S L+ + + + + G A G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG-QFTVIQLVGMLRGIASGMRYLAEM-- 137
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH--CDSHVTTAVRGTVG--HIAPEYLS 473
+HRD+ A NIL++ V DFGL++ L+ D T+++ G + APE ++
Sbjct: 138 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533
+ + +D + +GI++ E++S FG+ + D + I Q+ +L D
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS------FGERPYWDMSNQDVINAIEQDYRLPPPPDCPT 250
Query: 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ Q+ L C Q + RP+ +VV L+
Sbjct: 251 S----------LHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YM+ GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHR 135
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 196 WSFGILLTELTTKGRV 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQ-FQTEV 347
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E++ F E
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEA 264
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGA 405
++ H NL++L+G C ++ +M+ G++ L+ + ++ +A
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 324
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG 465
+ + YL ++ IHR++ A N L+ E + V DFGL++L+ + +
Sbjct: 325 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE------- 427
Query: 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 428 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 39/301 (12%)
Query: 289 FHFKELQSATSNFSSK---------NLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGN 335
F F++ A F+ + ++G G FG V G L+ VA+K LK G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 336 AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW 395
F +E ++ H N++ L G +++ YM NGS+ + L+ K +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRF 128
Query: 396 ATRKRIAL--GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453
+ + + G G+ YL D +HRD+ A NIL++ V DFG++++L+ D
Sbjct: 129 TVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED-D 184
Query: 454 SHVTTAVRG---TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 510
RG + APE ++ + + +DV+ +GI++ E++S +G+
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------YGERPYWDM 238
Query: 511 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ D +K I + +L +D + + Q+ L C Q S RPK ++V ML
Sbjct: 239 SNQDVIKAIEEGYRLPPPMDCPIA----------LHQLMLDCWQKERSDRPKFGQIVNML 288
Query: 571 E 571
+
Sbjct: 289 D 289
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 30/278 (10%)
Query: 304 KNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ ++G G FG V G+L+ VA+K LK G F +E ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCD 417
L G +T +++ +M NGS+ S L+ + + + + G A G+ YL D
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYL---AD 127
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVG--HIAPEYLS 473
+HR + A NIL++ V DFGL++ L D D T+A+ G + APE +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533
+ + +DV+ +GI++ E++S +G+ D + I Q+ +L +D
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS------YGERPYWDMTNQDVINAIEQDYRLPPPMDCP- 240
Query: 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ Q+ L C Q + RPK ++V L+
Sbjct: 241 ---------SALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YM+ GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHR 135
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 196 WSFGILLTELTTKGRV 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
F+ + +GKG FG VYKG + + T VVA+K + A Q E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
R G + +T+ ++ Y+ GS LK P L+ I +GL YLH +
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSE--- 135
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT-TAVRGTVGHIAPEYLSTGQS 477
+ IHRD+KAAN+LL E + + DFG+A L D+ + GT +APE +
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 478 SEKTDVFGFGILLLELISG 496
K D++ GI +EL G
Sbjct: 194 DFKADIWSLGITAIELAKG 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQ-FQTEV 347
++ + + ++ + K+ +G G +G VY+G + ++ VAVK LK+ E++ F E
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEA 267
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGA 405
++ H NL++L+G C ++ +M+ G++ L+ + + +A
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 327
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG 465
+ + YL ++ IHR++ A N L+ E + V DFGL++L+ + +
Sbjct: 328 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
APE L+ + S K+DV+ FG+LL E+ + +G + G L V +
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE------- 430
Query: 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
L++KD + E++ ++ C Q+ PS RP +E+ + E
Sbjct: 431 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 190 SDVYAFGIVLYELMTG 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS GS+ LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D+ AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 195 SDVYAFGIVLYELMTG 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS G + LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 76 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 192 SDVYAFGIVLYELMTG 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 24/276 (8%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++ + K+ +G G +G VY+G + ++ VAVK LK+ E F E ++ H N
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 68
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
L++L+G C ++ +M+ G++ L+ + + +A + + YL ++
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
IHRD+ A N L+ E + V DFGL++L+ + + APE L+
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 476 QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535
+ S K+DV+ FG+LL E+ + + G +Q + L++KD +
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------------VYELLEKDYRM 229
Query: 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
E++ ++ C Q+ PS RP +E+ + E
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 101 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 156
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 217 SDVYAFGIVLYELMTG 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 195 SDVYAFGIVLYELMTG 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 190 SDVYAFGIVLYELMTG 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++++ T K +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D + TT
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA + SH + G++ +APE + S +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 218 SDVYAFGIVLYELMTG 233
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ T VAVK +K G ++ E F E ++ H L++L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVE-AFLAEANVMKTLQHDKLVKLHA-VV 79
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHRD 424
T ++ +M+ GS+ LK+ K I A A G+ ++ ++ IHRD
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 136
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 484
++AANIL+ + DFGLA++++ + + + APE ++ G + K+DV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 485 GFGILLLELIS 495
FGILL+E+++
Sbjct: 197 SFGILLMEIVT 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHR 423
+ E + +V YMS G + LK + + + + A A G+ Y+ +HR
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D++AANIL+ E V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL + R
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 30/277 (10%)
Query: 304 KNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ ++G G FG V G L+ VA+K LK G F +E ++ H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCD 417
L G +++ YM NGS+ + L+ K + + + + G G+ YL D
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYLS---D 134
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG---TVGHIAPEYLST 474
+HRD+ A NIL++ V DFG++++L+ D RG + APE ++
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534
+ + +DV+ +GI++ E++S +G+ + D +K I + +L +D +
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA 247
Query: 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ Q+ L C Q S RPK ++V ML+
Sbjct: 248 ----------LHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 30/277 (10%)
Query: 304 KNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ ++G G FG V G L+ VA+K LK G F +E ++ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCD 417
L G +++ YM NGS+ + L+ K + + + + G G+ YL D
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYLS---D 128
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG---TVGHIAPEYLST 474
+HRD+ A NIL++ V DFG++++L+ D RG + APE ++
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534
+ + +DV+ +GI++ E++S +G+ + D +K I + +L +D +
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA 241
Query: 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ Q+ L C Q S RPK ++V ML+
Sbjct: 242 ----------LHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA-----------TRKRIA-- 402
++ L+G C ++ Y S G++ L+A+ P ++ + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 403 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAV 460
ARG+ YL Q K IHRD+ A N+L+ E + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 27/249 (10%)
Query: 296 SATSNFSSKNL-----VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQT 345
S + F ++L +GKG FG+V LQD G VVAVK+L+ F+
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFER 60
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIA 402
E+E++ H N+++ G C + R L+ Y+ GS+ L K K +D +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAV 460
+G+ YL + + IHRD+ NIL++ +GDFGL K+L D V
Sbjct: 121 SQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
+ APE L+ + S +DV+ FG++L EL F K ++++ I
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIG 229
Query: 521 QEKKLEMLV 529
+K+ +M+V
Sbjct: 230 NDKQGQMIV 238
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 107
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 164
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 225 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 80
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 137
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 198 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 242
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ T VAVK +K G+ F E ++ H L++L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHRD 424
T ++ +M+ GS+ LK+ K I A A G+ ++ ++ IHRD
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 309
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 484
++AANIL+ + DFGLA++++ + + + APE ++ G + K+DV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 485 GFGILLLELIS 495
FGILL+E+++
Sbjct: 370 SFGILLMEIVT 380
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA SH + G++ +APE + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 190 SDVYAFGIVLYELMTG 205
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 75
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 132
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 193 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 83
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 140
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 201 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 81
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 138
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 199 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 79
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 197 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 16/256 (6%)
Query: 295 QSATSNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVE--MIS 351
+ + +F +G G FG V+ +G A+K LK + + T E M+S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
+ H ++R+ G + ++ Y+ G + S L+ K A L Y
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH + II+RD+K NILLD+ + DFG AK + VT + GT +IAPE
Sbjct: 122 LHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEV 174
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531
+ST ++ D + FGIL+ E+++G T M + K ++ E + ++
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNAELRFPPFFNE 228
Query: 532 DLKNNYDRIELEEMVQ 547
D+K+ R+ ++ Q
Sbjct: 229 DVKDLLSRLITRDLSQ 244
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 82
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 139
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 200 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 244
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 94 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA SH + G++ +APE + S +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 210 SDVYAFGIVLYELMTG 225
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFC 365
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L +G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 366 MTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T + +V + S+ L + + IA A+G+ YLH + IIHRD
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
+K+ NI L E +GDFGLA SH + G++ +APE + S +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 481 TDVFGFGILLLELISG 496
+DV+ FGI+L EL++G
Sbjct: 218 SDVYAFGIVLYELMTG 233
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ G T VA+K LK G F E +++ H L++L + +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTM--SPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 367 TTTERL-LVYPYMSNGSVASRLK--AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHR 423
+ E + +V YM+ GS+ LK +L +A A G+ Y+ IHR
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHR 129
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
D+++ANIL+ + DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 484 FGFGILLLELISGLRA 499
+ FGILL EL++ R
Sbjct: 190 WSFGILLTELVTKGRV 205
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 76
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 194 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
F+ +GKG FG V+KG + VVA+K + A Q E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCD 417
+ G + ++ ++ Y+ GS L+A P AT + L +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSE-- 139
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
K IHRD+KAAN+LL E + + DFG+A L T V GT +APE +
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAY 197
Query: 478 SEKTDVFGFGILLLELISG 496
K D++ GI +EL G
Sbjct: 198 DSKADIWSLGITAIELAKG 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 74
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 131
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 192 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 94
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 212 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 94
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 212 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLA 353
NF ++GKG FG V +++ G + AVK LK + + TE ++SLA
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 354 VHRNLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
+ L + C T +RL V +++ G + ++ D A + A L++L
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H D II+RD+K N+LLD + DFG+ K C+ T GT +IAPE L
Sbjct: 141 H---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDYIAPEIL 196
Query: 473 STGQSSEKTDVFGFGILLLELISGLRALE 501
D + G+LL E++ G E
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS 351
+ S ++ +G G +G K + DG ++ K L G+ E Q +EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 352 LAVHRNLLRLIGFCM--TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGA 405
H N++R + T T +V Y G +AS + K + LD R+
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 406 ARGLLYLHEQCD--PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT 463
L H + D ++HRD+K AN+ LD +GDFGLA++L+H D+ A GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGT 179
Query: 464 VGHIAPEYLSTGQSSEKTDVFGFGILLLEL 493
+++PE ++ +EK+D++ G LL EL
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 307 VGKGGFGNVY--------KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 357
+G+G FG V K T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKR--------------I 401
++ L+G C ++ Y S G++ L+A+ P L+++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAV 460
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + H D TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE L + ++DV+ FG+LL E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS 351
+ S ++ +G G +G K + DG ++ K L G+ E Q +EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 352 LAVHRNLLRLIGFCM--TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGA 405
H N++R + T T +V Y G +AS + K + LD R+
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 406 ARGLLYLHEQCD--PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT 463
L H + D ++HRD+K AN+ LD +GDFGLA++L+H S T V GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GT 179
Query: 464 VGHIAPEYLSTGQSSEKTDVFGFGILLLEL 493
+++PE ++ +EK+D++ G LL EL
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 122
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 123 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 179 XRKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 225
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + ++++ +C QY P +RP E++
Sbjct: 226 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 79
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L+A +D + +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 197 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 27/249 (10%)
Query: 296 SATSNFSSKNL-----VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQT 345
S + F ++L +GKG FG+V LQD G VVAVK+L+ F+
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFER 60
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIA 402
E+E++ H N+++ G C + R L+ Y+ GS+ L K K +D +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG 462
+G+ YL + + IHRD+ NIL++ +GDFGL K+L G
Sbjct: 121 SQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 463 T--VGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
+ APE L+ + S +DV+ FG++L EL F K ++++ I
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIG 229
Query: 521 QEKKLEMLV 529
+K+ +M+V
Sbjct: 230 NDKQGQMIV 238
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 128
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 129 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 183
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 231
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 232 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 131
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 132 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 186
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 234
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 235 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL- 137
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 138 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 192
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 240
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 241 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 137
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 138 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 192
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 240
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 241 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 124
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 125 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 179
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 227
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 228 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 130
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 131 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 185
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 233
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 234 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 131
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 132 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 188 XRKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 234
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 235 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL- 127
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 128 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 182
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 230
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 231 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 79
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ ++ GS+ L K K +D + +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ IHRD+ NIL++ +GDFGL K+L D V + APE L+ +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 197 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 130
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 131 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 185
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 233
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 234 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 159
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N ++ E + +GDFG+ + + D
Sbjct: 160 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD- 214
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 262
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + + ++ +C QY P +RP E++
Sbjct: 263 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 50/296 (16%)
Query: 307 VGKGGFGNVYKGY------LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V++ + T+VAVK LK+ + + FQ E +++ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKA------------------------KPSLDWA 396
L+G C L++ YM+ G + L++ P L A
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 397 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456
+ IA A G+ YL E+ K +HRD+ N L+ E + DFGL++ + D +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 457 TTAVRGT-VGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW 515
+ + PE + + + ++DV+ +G++L E+ S +G L
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS------YG---------LQP 276
Query: 516 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ E+ + + D ++ + L E+ + LC LP+ RP + R+L+
Sbjct: 277 YYGMAHEEVIYYVRDGNILACPENCPL-ELYNLMRLCWSKLPADRPSFCSIHRILQ 331
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+GKG FG+V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 77
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 134
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQ 476
+ IHR++ NIL++ +GDFGL K+L + G + APE L+ +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
S +DV+ FG++L EL F K ++++ I +K+ +M+V
Sbjct: 195 FSVASDVWSFGVVLYEL--------FTYIEKSKSPPAEFMRMIGNDKQGQMIV 239
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 51/300 (17%)
Query: 304 KNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
K +G+G FG V+ +D +VAVK LKD + FQ E E+++ H +
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEH 78
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLK----------------AKPSLDWATRKRI 401
+++ G C ++V+ YM +G + L+ AK L + I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-----SHV 456
A A G++YL Q +HRD+ N L+ +GDFG+++ + D H
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
+R + PE + + + ++DV+ FG++L E+ + +GK + + + +
Sbjct: 196 MLPIRW----MPPESIMYRKFTTESDVWSFGVILWEIFT------YGKQPWFQLSNTEVI 245
Query: 517 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 576
+ I Q + LE R+ +E+ V L C Q P R + E+ ++L G A
Sbjct: 246 ECITQGRVLER----------PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 29/213 (13%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDGTVV----AVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ ++G G FG VYKG ++ +G V A+K L + ++F E +++
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 354 VHRNLLRLIGFCMTTTERL----------LVYPYMSNGSVASRLKAKPSLDWATRKRIAL 403
H +L+RL+G C++ T +L L Y + ++ S+L L+W +
Sbjct: 98 DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQ----- 148
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTT-AVRG 462
A+G++YL E+ +++HRD+ A N+L+ + DFGLA+LL+ + +
Sbjct: 149 -IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 204
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+ +A E + + + ++DV+ +G+ + EL++
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 305 NLVGKGGFGNVYKG-YLQDGTVV----AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
++G G FG VYKG ++ +G V A+K L + ++F E +++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 360 RLIGFCMTTTERL----------LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
RL+G C++ T +L L Y + ++ S+L L+W + A+G+
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQ------IAKGM 130
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTT-AVRGTVGHIA 468
+YL E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + +A
Sbjct: 131 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELIS 495
E + + + ++DV+ +G+ + EL++
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVY----KGYLQDG--TVVAVKRLKDGNAIGGEIQFQTE 346
E + A + +G+G FG VY KG ++D T VA+K + + ++ I+F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 347 VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK------------AKPSLD 394
++ +++RL+G L++ M+ G + S L+ A PSL
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL- 124
Query: 395 WATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ ++A A G+ YL+ K +HRD+ A N + E + +GDFG+ + + D
Sbjct: 125 -SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD- 179
Query: 455 HVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+ +G V ++PE L G + +DV+ FG++L E+ + A Q
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP--- 227
Query: 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ + E+ L +++ L + D + ++++ +C QY P +RP E++
Sbjct: 228 ---YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVH 355
+F +GKG FGNVY Q+ ++A+K L G E Q + E+E+ S H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N+LR+ + L+ + G + L+ D A L Y HE+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 135 ---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 476 QSSEKTDVFGFGILLLELISGL 497
EK D++ G+L E + G+
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGM 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS 351
+ S ++ +G G +G K + DG ++ K L G+ E Q +EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 352 LAVHRNLLRLIGFCM--TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGA 405
H N++R + T T +V Y G +AS + K + LD R+
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 406 ARGLLYLHEQCD--PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT 463
L H + D ++HRD+K AN+ LD +GDFGLA++L+H D GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DEDFAKEFVGT 179
Query: 464 VGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+++PE ++ +EK+D++ G LL EL +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVH 355
+F +GKG FGNVY Q+ ++A+K L G E Q + E+E+ S H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N+LR+ + L+ + G + L+ D A L Y HE+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 476 QSSEKTDVFGFGILLLELISGL 497
EK D++ G+L E + G+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGM 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 263
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 264 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 300
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVH 355
+F +GKG FGNVY Q+ ++A+K L G E Q + E+E+ S H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N+LR+ + L+ + G + L+ D A L Y HE+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 476 QSSEKTDVFGFGILLLELISGL 497
EK D++ G+L E + G+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGM 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 36/284 (12%)
Query: 305 NLVGKGGFGNVYKGYL--QDGTV--VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLL 359
++G+G FG+V +G L +DGT VAVK +K N+ EI+ F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 360 RLIGFCMTTTER-----LLVYPYMSNGSV-----ASRLKAKPS-LDWATRKRIALGAARG 408
RL+G C+ + + +++ P+M G + SRL+ P + T + + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV-RGTVGHI 467
+ YL + +HRD+ A N +L + V DFGL+K + D + + + V I
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 468 APEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527
A E L+ + K+DV+ FG+ + E+ + R + Q M D++ H+ K+ E
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT--RGMT-PYPGVQNHEMYDYLLHGHRLKQPED 273
Query: 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+D E+ ++ C + P RP S + LE
Sbjct: 274 CLD-------------ELYEIMYSCWRTDPLDRPTFSVLRLQLE 304
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VAVK +K+G+ E FQ M+ L+ H L++ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEF-FQEAQTMMKLS-HPKLVKFYGVCS 73
Query: 367 TTTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+V Y+SNG + + L++ L+ + + G+ +L + IHRD+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDL 130
Query: 426 KAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDV 483
A N L+D V DFG+ + +LD D +V++ + V APE + S K+DV
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELE 543
+ FGIL+ E+ S GK + V K+ Q +L + +
Sbjct: 189 WAFGILMWEVFS------LGKMPYDLYTNSEVVLKVSQGHRLYR----------PHLASD 232
Query: 544 EMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ Q+ C LP RP +++ +E
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGT-VVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHR 356
+F +GKG FGNVY + +VA+K L G E Q + E+E+ + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
N+LRL + L+ Y G + L+ + D I A L+Y H +
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK- 142
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
K+IHRD+K N+LL E + DFG + H S + GT+ ++ PE +
Sbjct: 143 --KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 477 SSEKTDVFGFGILLLELISG 496
+EK D++ G+L EL+ G
Sbjct: 198 HNEKVDLWCIGVLCYELLVG 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 263
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 264 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 300
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 278
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 279 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 315
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 278
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 279 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 315
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 201
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 255
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 256 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 292
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 278
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 279 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 264
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 265 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 301
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 356
++ + K+ +G G +G VY G + ++ VAVK LK+ E++ F E ++ H
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHP 88
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHE 414
NL++L+G C +V YM G++ L+ + + +A + + YL +
Sbjct: 89 NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK 148
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 474
+ IHRD+ A N L+ E + V DFGL++L+ + + APE L+
Sbjct: 149 K---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 205
Query: 475 GQSSEKTDVFGFGILLLELIS 495
S K+DV+ FG+LL E+ +
Sbjct: 206 NTFSIKSDVWAFGVLLWEIAT 226
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 264
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 265 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 226
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 280
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 281 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 317
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 216
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 270
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 271 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ-----DIYRASYYRKGGCAMLPV 210
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 264
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 265 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 301
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 284 GNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNAIGG 339
G R +E+++ S + ++G G G V G L Q VA+K LK G
Sbjct: 36 GRAGRSFTREIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 340 EIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRK 399
F +E ++ H N++RL G ++V YM NGS+ + L+ + +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQ 152
Query: 400 RIAL--GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSH 455
+ + G G+ YL D +HRD+ A N+L+D V DFGL+++L D ++
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
TT + + APE ++ S +DV+ FG+++ E+++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 55/297 (18%)
Query: 304 KNLVGKGGFGNVYKGYLQ-DGTVV--AVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLL 359
++++G+G FG V K ++ DG + A+KR+K+ + F E+E++ L H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 360 RLIGFCMTTTERLLVYPYMSNGSV-----ASR-LKAKPSLDWATRK----------RIAL 403
L+G C L Y +G++ SR L+ P+ A A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT 463
ARG+ YL ++ + IHRD+ A NIL+ E Y A + DFGL++ + V+ T
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 189
Query: 464 VGHI-----APEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+G + A E L+ + +DV+ +G+LL E++S G T + +K
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEK 243
Query: 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV----RMLE 571
+ Q +LE ++ D +E+ + C + P RP ++++ RMLE
Sbjct: 244 LPQGYRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 55/302 (18%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVV--AVKRLKDGNAIGGEIQFQTEVEMI-SLAV 354
++ ++++G+G FG V K ++ DG + A+KR+K+ + F E+E++ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNGSV-----ASR-LKAKPSLDWATRK--------- 399
H N++ L+G C L Y +G++ SR L+ P+ A
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 400 -RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTT 458
A ARG+ YL ++ + IHRD+ A NIL+ E Y A + DFGL++ +
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE-------V 194
Query: 459 AVRGTVGHI-----APEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML 513
V+ T+G + A E L+ + +DV+ +G+LL E++S G T
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCA 248
Query: 514 DWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV----RM 569
+ +K+ Q +LE ++ D +E+ + C + P RP ++++ RM
Sbjct: 249 ELYEKLPQGYRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
Query: 570 LE 571
LE
Sbjct: 299 LE 300
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG-TVGHIAP 469
E IHRD+ A N LL A +GDFG+A+ + + V + P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 470 EYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
E G + KTD + FG+LL E+ S L + + +NQ+ +L++V + M
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR-----MDP 307
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 308 PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG-TVGHIAP 469
E IHRD+ A N LL A +GDFG+A+ + + V + P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 470 EYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
E G + KTD + FG+LL E+ S L + + +NQ+ +L++V + M
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR-----MDP 284
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 285 PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 318
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+GKG FG+V G + G VAVK +K+ F E +++ H NL++L+G +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP------- 418
L +V YM+ GS+ L+ +R R LG L + + C+
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLR--------SRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
+HRD+ A N+L+ E A V DFGL K V+ T APE L + S
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 177
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
K+DV+ FGILL E+ S FG+ + + D V ++ + K++
Sbjct: 178 TKSDVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 219
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG VY+G + VAVK L + + E+ F E +IS H+N++R
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK-AKP------SLDWATRKRIALGAARGLLYLH 413
IG + + R ++ M+ G + S L+ +P SL +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 414 EQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHCDSHVTTAVRG------TV 464
E IHRD+ A N LL A +GDFG+A+ D + + R V
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 236
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE G + KTD + FG+LL E+ S L + + +NQ+ +L++V +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTSGGR--- 290
Query: 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
M K+ RI M Q C Q+ P RP + ++ +E
Sbjct: 291 --MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 327
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+GKG FG+V G + G VAVK +K+ F E +++ H NL++L+G +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP------- 418
L +V YM+ GS+ L+ +R R LG L + + C+
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLR--------SRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
+HRD+ A N+L+ E A V DFGL K V+ T APE L + S
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 192
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
K+DV+ FGILL E+ S FG+ + + D V ++ + K++
Sbjct: 193 TKSDVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 234
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+GKG FG+V G + G VAVK +K+ F E +++ H NL++L+G +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP------- 418
L +V YM+ GS+ L+ +R R LG L + + C+
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLR--------SRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
+HRD+ A N+L+ E A V DFGL K V+ T APE L S
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFS 183
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
K+DV+ FGILL E+ S FG+ + + D V ++ + K++
Sbjct: 184 TKSDVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+GKG FG+V G + G VAVK +K+ F E +++ H NL++L+G +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 367 TTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP------- 418
L +V YM+ GS+ L+ +R R LG L + + C+
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLR--------SRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
+HRD+ A N+L+ E A V DFGL K V+ T APE L + S
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 364
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
K+DV+ FGILL E+ S FG+ + + D V ++ + K++
Sbjct: 365 TKSDVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 406
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEV 347
KEL + S + ++G G FG V G L+ VA+K LK G F E
Sbjct: 38 KELDA--SCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GA 405
++ H N++ L G ++V +M NG++ + L+ K + + + + G
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR-KHDGQFTVIQLVGMLRGI 154
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT-- 463
A G+ YL D +HRD+ A NIL++ V DFGL+++++ V T G
Sbjct: 155 AAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 464 VGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523
V APE + + + +DV+ +GI++ E++S +G+ + D +K I +
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------YGERPYWDMSNQDVIKAIEEGY 265
Query: 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+L +D + Q+ L C Q + RPK ++V +L+
Sbjct: 266 RLPAPMDCPAG----------LHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL-- 359
+GKG FG+V L D G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 72
Query: 360 -RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-- 416
R + + E LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKG 123
Query: 417 -----DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL--LDHCDSHVTTAVRGTVGHIAP 469
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 470 EYLSTGQSSEKTDVFGFGILLLELIS 495
E LS S ++DV+ FG++L EL +
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 31/221 (14%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
N L+G+G +G VYKG L D VAVK N + + + L H N+
Sbjct: 14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINEKNIYRVPLMEHDNIA 70
Query: 360 RLIGFCMTTT-----ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH- 413
R I T E LLV Y NGS+ L S DW + R+A RGL YLH
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHT 129
Query: 414 -----EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD--------HCDSHVTTAV 460
+ P I HRD+ + N+L+ V+ DFGL+ L D+ + V
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 461 RGTVGHIAPEYLSTG-------QSSEKTDVFGFGILLLELI 494
GT+ ++APE L + ++ D++ G++ E+
Sbjct: 190 -GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 284 GNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNAIGG 339
G R +E+++ S + ++G G G V G L Q VA+K LK G
Sbjct: 36 GRAGRSFTREIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 340 EIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRK 399
F +E ++ H N++RL G ++V YM NGS+ + L+ + +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQ 152
Query: 400 RIAL--GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSH 455
+ + G G+ YL D +HRD+ A N+L+D V DFGL+++L D +
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
TT + + APE ++ S +DV+ FG+++ E+++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEI-QFQTEVEM 349
K+ + +G GGF V ++ G +VA+K + D N +G ++ + +TE+E
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEA 61
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
+ H+++ +L T + +V Y G + + ++ L + + +
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAV 121
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL-AKLLDHCDSHVTTAVRGTVGHIA 468
Y+H Q HRD+K N+L DEY++ + DFGL AK + D H+ T G++ + A
Sbjct: 122 AYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAA 177
Query: 469 PEYLSTGQS--SEKTDVFGFGILLLELISGL 497
PE L G+S + DV+ GILL L+ G
Sbjct: 178 PE-LIQGKSYLGSEADVWSMGILLYVLMCGF 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 294 LQSATSNFSSKNL-----VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--Q 342
LQS T K+L +G G FG V +G VAVK LK E
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 343 FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRI 401
F EV + HRNL+RL G +T ++ V GS+ RL K + T R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR 461
A+ A G+ YL + + IHRD+ A N+LL +GDFGL + L D H
Sbjct: 127 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 462 GTV--GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
V APE L T S +D + FG+ L E+ +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 294 LQSATSNFSSKNL-----VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--Q 342
LQS T K+L +G G FG V +G VAVK LK E
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 343 FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRI 401
F EV + HRNL+RL G +T ++ V GS+ RL K + T R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR 461
A+ A G+ YL + + IHRD+ A N+LL +GDFGL + L D H
Sbjct: 127 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 462 GTV--GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
V APE L T S +D + FG+ L E+ +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 137/297 (46%), Gaps = 55/297 (18%)
Query: 304 KNLVGKGGFGNVYKGYLQ-DGTVV--AVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLL 359
++++G+G FG V K ++ DG + A+KR+K+ + F E+E++ L H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 360 RLIGFCMTTTERLLVYPYMSNGSV-----ASR-LKAKPSLDWATRK----------RIAL 403
L+G C L Y +G++ SR L+ P+ A A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT 463
ARG+ YL ++ + IHR++ A NIL+ E Y A + DFGL++ + V+ T
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 196
Query: 464 VGHI-----APEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+G + A E L+ + +DV+ +G+LL E++S G T + +K
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEK 250
Query: 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV----RMLE 571
+ Q +LE ++ D +E+ + C + P RP ++++ RMLE
Sbjct: 251 LPQGYRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 297
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
VGKG +G V++G L G VAVK +D + E TE+ L H N+L I
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE----TEIYNTVLLRHDNILGFIAS 70
Query: 365 CMTT----TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
MT+ T+ L+ Y +GS+ L+ + +L+ R+A+ AA GL +LH Q
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQ-RQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD K+ N+L+ + + D GLA + ++ VG ++APE L
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S + TD++ FG++L E+
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
VGKG +G V++G Q G VAVK + E + E E+ + + H N+L I
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIAS 70
Query: 365 CMTT----TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
MT+ T+ L+ Y GS+ L+ +LD + RI L A GL +LH Q
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + + D GLA + + + VG ++APE L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
S ++ D++ FG++L E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
VGKG +G V++G Q G VAVK + E + E E+ + + H N+L I
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIAS 70
Query: 365 CMTT----TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
MT+ T+ L+ Y GS+ L+ +LD + RI L A GL +LH Q
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + + D GLA + + + VG ++APE L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
S ++ D++ FG++L E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V Y D G +VAVK LK+G +Q E+E++ H ++++
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 361 LIGFCMTTTER--LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C E+ LV Y+ GS+ L + + A A G+ YLH Q
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ--- 131
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR----GTVGHIAPEYLST 474
IHR + A N+LLD +GDFGLAK + + H VR V APE L
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 475 GQSSEKTDVFGFGILLLELIS 495
+ +DV+ FG+ L EL++
Sbjct: 190 CKFYYASDVWSFGVTLYELLT 210
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
VGKG +G V++G Q G VAVK + E + E E+ + + H N+L I
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIAS 99
Query: 365 CMTT----TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
MT+ T+ L+ Y GS+ L+ +LD + RI L A GL +LH Q
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + + D GLA + + + VG ++APE L
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
S ++ D++ FG++L E+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V Y D G +VAVK LK+G +Q E+E++ H ++++
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 361 LIGFCMTTTER--LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C E+ LV Y+ GS+ L + + A A G+ YLH Q
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ--- 130
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR----GTVGHIAPEYLST 474
IHR + A N+LLD +GDFGLAK + + H VR V APE L
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 475 GQSSEKTDVFGFGILLLELIS 495
+ +DV+ FG+ L EL++
Sbjct: 189 CKFYYASDVWSFGVTLYELLT 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 113/251 (45%), Gaps = 34/251 (13%)
Query: 308 GKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFC 365
+G FG V+K L + VAVK I + +Q E E+ SL H N+L+ IG
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF----PIQDKQSWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 366 MTTT----ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC----- 416
T + L+ + GS++ LKA + W IA ARGL YLHE
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 417 --DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR-GTVGHIAPEYLS 473
P I HRD+K+ N+LL A + DFGLA + S T + GT ++APE L
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 474 TGQSSE-----KTDVFGFGILLLELISGLRA---------LEFGKTANQKGAMLDWVKKI 519
+ + + D++ G++L EL S A L F + Q ++ D + +
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266
Query: 520 HQEKKLEMLVD 530
+KK +L D
Sbjct: 267 VHKKKRPVLRD 277
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 65/322 (20%)
Query: 291 FKELQSATSNFSSKNLV-----GKGGFGNVYK----------GYLQDGTVVAVKRLKDGN 335
FK L+ F KNLV G+G FG V K GY T VAVK LK+ N
Sbjct: 10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGY----TTVAVKMLKE-N 64
Query: 336 AIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAK 390
A E++ +E ++ H ++++L G C LL+ Y GS+ L K
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 391 PS------------LDWATRKRIALG--------AARGLLYLHEQCDPKIIHRDVKAANI 430
P LD + + +G ++G+ YL E K++HRD+ A NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI 181
Query: 431 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGIL 489
L+ E + + DFGL++ + DS+V + R V +A E L + ++DV+ FG+L
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 490 LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVA 549
L E+++ L + ++ + + +K H+ ++ +N EEM ++
Sbjct: 242 LWEIVT-LGGNPYPGIPPER--LFNLLKTGHRMER---------PDNCS----EEMYRLM 285
Query: 550 LLCTQYLPSLRPKMSEVVRMLE 571
L C + P RP +++ + LE
Sbjct: 286 LQCWKQEPDKRPVFADISKDLE 307
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V+ T VAVK +K G+ F E ++ H L++L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHA-VV 246
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--ARGLLYLHEQCDPKIIHRD 424
T ++ +M+ GS+ LK+ K I A A G+ ++ ++ IHRD
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 303
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 484
++AANIL+ + DFGLA++ + + APE ++ G + K+DV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 485 GFGILLLELIS 495
FGILL+E+++
Sbjct: 354 SFGILLMEIVT 364
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 48/296 (16%)
Query: 300 NFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
N K +G+G FG V+ QD +VAVK LKD + F E E+++
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNL 72
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK-------------PSLDWATRKR 400
H ++++ G C+ ++V+ YM +G + L+A L +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 401 IALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD-----SH 455
IA A G++YL Q +HRD+ N L+ E +GDFG+++ + D H
Sbjct: 133 IAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW 515
+R + PE + + + ++DV+ G++L E+ + +GK + + +
Sbjct: 190 TMLPIRW----MPPESIMYRKFTTESDVWSLGVVLWEIFT------YGKQPWYQLSNNEV 239
Query: 516 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
++ I Q + L+ R +E+ ++ L C Q P +R + + +L+
Sbjct: 240 IECITQGRVLQR----------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 295 QSATSNFSSKNL-----VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--QF 343
QS T K+L +G G FG V +G VAVK LK E F
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 344 QTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRIA 402
EV + HRNL+RL G +T ++ V GS+ RL K + T R A
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG 462
+ A G+ YL + + IHRD+ A N+LL +GDFGL + L D H
Sbjct: 122 VQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 463 TV--GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
V APE L T S +D + FG+ L E+ +
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 295 QSATSNFSSKNL-----VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--QF 343
QS T K+L +G G FG V +G VAVK LK E F
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 344 QTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRIA 402
EV + HRNL+RL G +T ++ V GS+ RL K + T R A
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG 462
+ A G+ YL + + IHRD+ A N+LL +GDFGL + L D H
Sbjct: 122 VQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 463 TV--GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
V APE L T S +D + FG+ L E+ +
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 299 SNFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 351
+N +G G FG V + G ++ V VAVK LK + +E++++S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS--RLKAKPSLDWATRKRIALGAARGL 409
L H N++ L+G C L++ Y G + + R KA+ LD + + L R L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL---RDL 154
Query: 410 LYLHEQ--------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAV 460
L+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE + + ++DV+ +GILL E+ S
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 144/322 (44%), Gaps = 65/322 (20%)
Query: 291 FKELQSATSNFSSKNLV-----GKGGFGNVYK----------GYLQDGTVVAVKRLKDGN 335
FK L+ F KNLV G+G FG V K GY T VAVK LK+ N
Sbjct: 10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGY----TTVAVKMLKE-N 64
Query: 336 AIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAK 390
A E++ +E ++ H ++++L G C LL+ Y GS+ L K
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 391 PS------------LDWATRKRIALG--------AARGLLYLHEQCDPKIIHRDVKAANI 430
P LD + + +G ++G+ YL E K++HRD+ A NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI 181
Query: 431 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGIL 489
L+ E + + DFGL++ + DS V + R V +A E L + ++DV+ FG+L
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 490 LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVA 549
L E+++ L + ++ + + +K H+ ++ +N EEM ++
Sbjct: 242 LWEIVT-LGGNPYPGIPPER--LFNLLKTGHRMER---------PDNCS----EEMYRLM 285
Query: 550 LLCTQYLPSLRPKMSEVVRMLE 571
L C + P RP +++ + LE
Sbjct: 286 LQCWKQEPDKRPVFADISKDLE 307
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
++ + ++G G V Y VA+KR+ + E++ +S H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPS-----LDWATRKRIALGAARGLL 410
+ + E LV +S GSV +K AK LD +T I GL
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL----DHCDSHVTTAVRGTVGH 466
YLH+ IHRDVKA NILL E + DFG++ L D + V GT
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 467 IAPEYLSTGQSSE-KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
+APE + + + K D++ FGI +EL +G A + K K ML + L
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQ---NDPPSL 242
Query: 526 EMLV-DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 568
E V DK++ Y + +M+ LC Q P RP +E++R
Sbjct: 243 ETGVQDKEMLKKYGK-SFRKMIS---LCLQKDPEKRPTAAELLR 282
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 42/275 (15%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVA 327
N Q + C+ ++KR + K +G+G FG V+ QD +VA
Sbjct: 26 NPQYFSDACVHHIKR----------RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVA 75
Query: 328 VKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL 387
VK LK+ + + FQ E E++++ H++++R G C L+V+ YM +G + L
Sbjct: 76 VKALKEASESARQ-DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
Query: 388 K---------------AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432
+ A L +A A G++YL +HRD+ N L+
Sbjct: 135 RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLV 191
Query: 433 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLL 491
+ +GDFG+++ + D + V + + PE + + + ++DV+ FG++L
Sbjct: 192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 251
Query: 492 ELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
E+ + +GK + + + + I Q ++LE
Sbjct: 252 EIFT------YGKQPWYQLSNTEAIDCITQGRELE 280
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 299 SNFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 351
+N +G G FG V + G ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS--RLKAKPSLDWATRKRIALGAARGL 409
L H N++ L+G C L++ Y G + + R KA+ LD + + L R L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL---RDL 162
Query: 410 LYLHEQ--------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAV 460
L+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE + + ++DV+ +GILL E+ S
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
++ + ++G G V Y VA+KR+ + E++ +S H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPS-----LDWATRKRIALGAARGLL 410
+ + E LV +S GSV +K AK LD +T I GL
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL----DHCDSHVTTAVRGTVGH 466
YLH+ IHRDVKA NILL E + DFG++ L D + V GT
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 467 IAPEYLSTGQSSE-KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
+APE + + + K D++ FGI +EL +G A + K K ML + L
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQ---NDPPSL 247
Query: 526 EMLV-DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR 568
E V DK++ Y + +M+ LC Q P RP +E++R
Sbjct: 248 ETGVQDKEMLKKYGK-SFRKMIS---LCLQKDPEKRPTAAELLR 287
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL-- 359
+GKG FG+V L D G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 75
Query: 360 -RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-- 416
R + + LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKG 126
Query: 417 -----DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL--LDHCDSHVTTAVRGTVGHIAP 469
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 470 EYLSTGQSSEKTDVFGFGILLLELIS 495
E LS S ++DV+ FG++L EL +
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL-- 359
+GKG FG+V L D G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 76
Query: 360 -RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-- 416
R + + LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKG 127
Query: 417 -----DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL--LDHCDSHVTTAVRGTVGHIAP 469
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 470 EYLSTGQSSEKTDVFGFGILLLELIS 495
E LS S ++DV+ FG++L EL +
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 307 VGKGGFGNV---YKGYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL-- 359
+GKG FG+V L D G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 88
Query: 360 -RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-- 416
R + + LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKG 139
Query: 417 -----DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL--LDHCDSHVTTAVRGTVGHIAP 469
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 470 EYLSTGQSSEKTDVFGFGILLLELIS 495
E LS S ++DV+ FG++L EL +
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 307 VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 360
+G G FG V +G VAVK LK E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
L G +T ++ V GS+ RL K + T R A+ A G+ YL + +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV--GHIAPEYLSTGQS 477
IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 478 SEKTDVFGFGILLLELIS 495
S +D + FG+ L E+ +
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 285 NLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQ- 342
+L L+ F LVG G +G VYKG +++ G + A+K + + G E +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTGDEEEE 66
Query: 343 FQTEVEMIS-LAVHRNLLRLIGFCMTTT------ERLLVYPYMSNGSVASRLKAKP---- 391
+ E+ M+ + HRN+ G + + LV + GSV +K
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 392 SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451
+W I RGL +LH+ K+IHRD+K N+LL E E + DFG++ LD
Sbjct: 127 KEEWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
Query: 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGILLLELISG 496
T + GT +APE ++ ++ + K+D++ GI +E+ G
Sbjct: 182 TVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 307 VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 360
+G G FG V +G VAVK LK E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
L G +T ++ V GS+ RL K + T R A+ A G+ YL + +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV--GHIAPEYLSTGQS 477
IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 478 SEKTDVFGFGILLLELIS 495
S +D + FG+ L E+ +
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVE--M 349
+++ +F ++GKG FG V+ + + A+K LK + + T VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 350 ISLAVHRNLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+SLA L + T E L V Y++ G + +++ D + A G
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L +LH + I++RD+K NILLD+ + DFG+ K D+ T GT +IA
Sbjct: 132 LQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIA 187
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE L + + D + FG+LL E++ G
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVH 355
++FS ++G+GGFG VY D G + A+K L K GE E M+SL
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 356 RN--LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
+ + + + T ++L + M+ G + L A + A GL ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H + +++RD+K ANILLDE+ + D GLA H + GT G++APE L
Sbjct: 309 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 473 STGQSSEKT-DVFGFGILLLELISGLRALEFGKTANQ 508
G + + + D F G +L +L+ G KT ++
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVH 355
++FS ++G+GGFG VY D G + A+K L K GE E M+SL
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 356 RN--LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
+ + + + T ++L + M+ G + L A + A GL ++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H + +++RD+K ANILLDE+ + D GLA H + GT G++APE L
Sbjct: 308 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 361
Query: 473 STGQSSEKT-DVFGFGILLLELISGLRALEFGKTANQ 508
G + + + D F G +L +L+ G KT ++
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 307 VGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 360
+G G FG V +G VAVK LK E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
L G +T ++ V GS+ RL K + T R A+ A G+ YL + +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV--GHIAPEYLSTGQS 477
IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 478 SEKTDVFGFGILLLELIS 495
S +D + FG+ L E+ +
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVH 355
++FS ++G+GGFG VY D G + A+K L K GE E M+SL
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 356 RN--LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
+ + + + T ++L + M+ G + L A + A GL ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H + +++RD+K ANILLDE+ + D GLA H + GT G++APE L
Sbjct: 309 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 473 STGQSSEKT-DVFGFGILLLELISGLRALEFGKTANQ 508
G + + + D F G +L +L+ G KT ++
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVH 355
++FS ++G+GGFG VY D G + A+K L K GE E M+SL
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 356 RN--LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
+ + + + T ++L + M+ G + L A + A GL ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H + +++RD+K ANILLDE+ + D GLA H + GT G++APE L
Sbjct: 309 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 473 STGQSSEKT-DVFGFGILLLELISGLRALEFGKTANQ 508
G + + + D F G +L +L+ G KT ++
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 129
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV--RGTVGHIAPEYLSTGQSSEKTD 482
+ A N L+++ V DFGL++ + D T++V + V PE L + S K+D
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 483 VFGFGILLLELISGLRALEFGKTANQKGA 511
++ FG+L+ E+ S L + + + N + A
Sbjct: 188 IWAFGVLMWEIYS-LGKMPYERFTNSETA 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 125
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV--RGTVGHIAPEYLSTGQSSEKTD 482
+ A N L+++ V DFGL++ + D T++V + V PE L + S K+D
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 483 VFGFGILLLELISGLRALEFGKTANQKGA 511
++ FG+L+ E+ S L + + + N + A
Sbjct: 184 IWAFGVLMWEIYS-LGKMPYERFTNSETA 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV--RGTVGHIAPEYLSTGQSSEKTD 482
+ A N L+++ V DFGL++ + D T++V + V PE L + S K+D
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 483 VFGFGILLLELISGLRALEFGKTANQKGA 511
++ FG+L+ E+ S L + + + N + A
Sbjct: 189 IWAFGVLMWEIYS-LGKMPYERFTNSETA 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV--RGTVGHIAPEYLSTGQSSEKTD 482
+ A N L+++ V DFGL++ + D T++V + V PE L + S K+D
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 483 VFGFGILLLELISGLRALEFGKTANQKGA 511
++ FG+L+ E+ S L + + + N + A
Sbjct: 204 IWAFGVLMWEIYS-LGKMPYERFTNSETA 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V Y D G +VAVK LK ++ E++++ H ++++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 361 LIGFCMTTTER--LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C E+ LV Y+ GS+ L + S+ A A G+ YLH Q
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQ--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR----GTVGHIAPEYLST 474
IHR++ A N+LLD +GDFGLAK + + H VR V APE L
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 475 GQSSEKTDVFGFGILLLELIS 495
+ +DV+ FG+ L EL++
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 484
+ A N L+++ V DFGL++ + + + + V PE L + S K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 485 GFGILLLELISGLRALEFGKTANQKGA 511
FG+L+ E+ S L + + + N + A
Sbjct: 206 AFGVLMWEIYS-LGKMPYERFTNSETA 231
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 296 SATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 354
S++S F +G G + VYKG + G VA+K +K + G E+ ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG---SVASRL--KAKPSLDWATRKRIALGAARGL 409
H N++RL T + LV+ +M N + SR L+ K +GL
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAP 469
+ HE KI+HRD+K N+L+++ + +GDFGLA+ + ++ V T+ + AP
Sbjct: 122 AFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 470 EYLSTGQS-SEKTDVFGFGILLLELISG 496
+ L ++ S D++ G +L E+I+G
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 65/322 (20%)
Query: 291 FKELQSATSNFSSKNLV-----GKGGFGNVYK----------GYLQDGTVVAVKRLKDGN 335
FK L+ F KNLV G+G FG V K GY T VAVK LK+ N
Sbjct: 10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGY----TTVAVKMLKE-N 64
Query: 336 AIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAK 390
A E++ +E ++ H ++++L G C LL+ Y GS+ L K
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 391 PS------------LDWATRKRIALG--------AARGLLYLHEQCDPKIIHRDVKAANI 430
P LD + + +G ++G+ YL E ++HRD+ A NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNI 181
Query: 431 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGIL 489
L+ E + + DFGL++ + DS V + R V +A E L + ++DV+ FG+L
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 490 LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVA 549
L E+++ L + ++ + + +K H+ ++ +N EEM ++
Sbjct: 242 LWEIVT-LGGNPYPGIPPER--LFNLLKTGHRMER---------PDNCS----EEMYRLM 285
Query: 550 LLCTQYLPSLRPKMSEVVRMLE 571
L C + P RP +++ + LE
Sbjct: 286 LQCWKQEPDKRPVFADISKDLE 307
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 299 SNFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 351
+N +G G FG V + G ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSL---DWATRKRIALGAARG 408
L H N++ L+G C L++ Y G + + L+ K + D A + + R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 409 LLYLHEQ--------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTA 459
LL+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 460 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE + + ++DV+ +GILL E+ S
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V Y D G +VAVK LK ++ E++++ H ++++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 361 LIGFCMTTTER--LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C E+ LV Y+ GS+ L + S+ A A G+ YLH Q
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR----GTVGHIAPEYLST 474
IHR++ A N+LLD +GDFGLAK + + H VR V APE L
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 475 GQSSEKTDVFGFGILLLELIS 495
+ +DV+ FG+ L EL++
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 37/282 (13%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 352
A + ++G+G FG VY+G + VAVK K + + +F +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 353 AVHRNLLRLIGFCMTTTERLL--VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H ++++LIG ++ +YPY G R K SL T +L + +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMA 139
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470
YL +HRD+ NIL+ +GDFGL++ ++ D + + R + ++PE
Sbjct: 140 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 471 YLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530
++ + + +DV+ F + + E++S FGK W+ + K + +++
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILS------FGKQP------FFWL----ENKDVIGVLE 240
Query: 531 KDLKNNYDRIELEEMVQVALL-----CTQYLPSLRPKMSEVV 567
K DR+ ++ L C Y PS RP+ +E+V
Sbjct: 241 KG-----DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVE--M 349
+++ +F ++GKG FG V+ + + A+K LK + + T VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 350 ISLAVHRNLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+SLA L + T E L V Y++ G + +++ D + A G
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L +LH + I++RD+K NILLD+ + DFG+ K D+ T GT +IA
Sbjct: 131 LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIA 186
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE L + + D + FG+LL E++ G
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 32/242 (13%)
Query: 307 VGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V+ QD +VAVK LK+ + + FQ E E++++ H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 84
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK---------------AKPSLDWATRKRIALGA 405
G C L+V+ YM +G + L+ A L +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTV 464
A G++YL +HRD+ N L+ + +GDFG+++ + D + V +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE + + + ++DV+ FG++L E+ + +GK + + + + I Q ++
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQLSNTEAIDCITQGRE 255
Query: 525 LE 526
LE
Sbjct: 256 LE 257
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 136
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV--RGTVGHIAPEYLSTGQSSEKTD 482
+ A N L+++ V DFGL++ + D T++V + V PE L + S K+D
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 483 VFGFGILLLELISGLRALEFGKTANQKGA 511
++ FG+L+ E+ S L + + + N + A
Sbjct: 195 IWAFGVLMWEIYS-LGKMPYERFTNSETA 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 37/282 (13%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 352
A + ++G+G FG VY+G + VAVK K + + +F +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 353 AVHRNLLRLIGFCMTTTERLL--VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H ++++LIG ++ +YPY G R K SL T +L + +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMA 127
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470
YL +HRD+ NIL+ +GDFGL++ ++ D + + R + ++PE
Sbjct: 128 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 471 YLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530
++ + + +DV+ F + + E++S FGK W+ + K + +++
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILS------FGKQP------FFWL----ENKDVIGVLE 228
Query: 531 KDLKNNYDRIELEEMVQVALL-----CTQYLPSLRPKMSEVV 567
K DR+ ++ L C Y PS RP+ +E+V
Sbjct: 229 KG-----DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 301 FSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQ---TEVEMISLAVHR 356
FS +G G FG VY +++ VVA+K++ E ++Q EV + H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHP 114
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQ 415
N ++ G + LV Y GS + L+ K L + GA +GL YLH
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY---L 472
+IHRDVKA NILL E +GDFG A ++ + V GT +APE +
Sbjct: 174 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAM 225
Query: 473 STGQSSEKTDVFGFGILLLEL 493
GQ K DV+ GI +EL
Sbjct: 226 DEGQYDGKVDVWSLGITCIEL 246
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 32/242 (13%)
Query: 307 VGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V+ QD +VAVK LK+ + + FQ E E++++ H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLK---------------AKPSLDWATRKRIALGA 405
G C L+V+ YM +G + L+ A L +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTV 464
A G++YL +HRD+ N L+ + +GDFG+++ + D + V +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524
+ PE + + + ++DV+ FG++L E+ + +GK + + + + I Q ++
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQLSNTEAIDCITQGRE 249
Query: 525 LE 526
LE
Sbjct: 250 LE 251
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 301 FSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVH 355
FS +G G FG VY +++ VVA+K++ K N +I EV + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLRH 74
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHE 414
N ++ G + LV Y GS + L+ K L + GA +GL YLH
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY--- 471
+IHRDVKA NILL E +GDFG A ++ + V GT +APE
Sbjct: 134 H---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILA 185
Query: 472 LSTGQSSEKTDVFGFGILLLEL 493
+ GQ K DV+ GI +EL
Sbjct: 186 MDEGQYDGKVDVWSLGITCIEL 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 37/282 (13%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 352
A + ++G+G FG VY+G + VAVK K + + +F +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 353 AVHRNLLRLIGFCMTTTERLLV--YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H ++++LIG +++ YPY G R K SL T +L + +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMA 123
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470
YL +HRD+ NIL+ +GDFGL++ ++ D + + R + ++PE
Sbjct: 124 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 471 YLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530
++ + + +DV+ F + + E++S FGK W+ + K + +++
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILS------FGKQP------FFWL----ENKDVIGVLE 224
Query: 531 KDLKNNYDRIELEEMVQVALL-----CTQYLPSLRPKMSEVV 567
K DR+ ++ L C Y PS RP+ +E+V
Sbjct: 225 KG-----DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 21/218 (9%)
Query: 299 SNFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 351
+N +G G FG V + G ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK--PSLDWA---TRKRIALGAA 406
L H N++ L+G C L++ Y G + + L+ K P L+++ + ++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 407 RGLLYLHEQ--------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVT 457
R LL+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE + + ++DV+ +GILL E+ S
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 308 GKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA--VHRNLLRLIGF 364
+G FG V+K L D V + L+D + +Q+E E+ S H NLL+ I
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQS------WQSEREIFSTPGMKHENLLQFIAA 77
Query: 365 ----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC---- 416
E L+ + GS+ LK + W +A +RGL YLHE
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGN-IITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 417 ----DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD----HCDSHVTTAVRGTVGHIA 468
P I HRD K+ N+LL AV+ DFGLA + D+H GT ++A
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMA 193
Query: 469 PEYLSTGQSSE-----KTDVFGFGILLLELISGLRA 499
PE L + + + D++ G++L EL+S +A
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA 229
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 25/205 (12%)
Query: 305 NLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
++G G FG VYKG ++ DG VA+K L++ + + E +++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVAS-------RLKAKPSLDWATRKRIALGAARGLLYL 412
RL+G C+T+T +L V M G + RL ++ L+W + A+G+ YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWC------MQIAKGMSYL 135
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPE 470
D +++HRD+ A N+L+ + DFGLA+LL D + H + + +A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG-KVPIKWMALE 191
Query: 471 YLSTGQSSEKTDVFGFGILLLELIS 495
+ + + ++DV+ +G+ + EL++
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSXQEYSDWKEK 223
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 107 ISGHIPTEIGKLS-KLLTLDLSNNFFTGPI-PSTVSHLE-TLQYLRLNNNSLTGAIPPSL 163
SG +P + LS LLTLDLS+N F+GPI P+ + + TLQ L L NN TG IPP+L
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 164 SNMSQLAFLDLSYNNLSGPVPS 185
SN S+L L LS+N LSG +PS
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPS 433
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+SG+IP EIG + L L+L +N +G IP V L L L L++N L G IP ++S +
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 700
Query: 167 SQLAFLDLSYNNLSGPVP 184
+ L +DLS NNLSGP+P
Sbjct: 701 TMLTEIDLSNNNLSGPIP 718
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHL 142
LSGT+ SS+G + G IP E+ + L TL L N TG IPS +S+
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 143 ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 185
L ++ L+NN LTG IP + + LA L LS N+ SG +P+
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+SG IP+ +G LSKL L L N G IP + +++TL+ L L+ N LTG IP LSN
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 167 SQLAFLDLSYNNLSGPVPSFHAKTFNI 193
+ L ++ LS N L+G +P + + N+
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENL 513
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
++G IP+ + + L + LSNN TG IP + LE L L+L+NNS +G IP L +
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 167 SQLAFLDLSYNNLSGPVPS 185
L +LDL+ N +G +P+
Sbjct: 535 RSLIWLDLNTNLFNGTIPA 553
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+G IP + S+L++L LS N+ +G IPS++ L L+ L+L N L G IP L +
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Query: 167 SQLAFLDLSYNNLSGPVPS 185
L L L +N+L+G +PS
Sbjct: 463 KTLETLILDFNDLTGEIPS 481
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHL 142
LSG + IG ISG IP E+G L L LDLS+N G IP +S L
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 700
Query: 143 ETLQYLRLNNNSLTGAIP 160
L + L+NN+L+G IP
Sbjct: 701 TMLTEIDLSNNNLSGPIP 718
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+SG I ++L L++S+N F GPIP L++LQYL L N TG IP LS
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 167 SQ-LAFLDLSYNNLSGPVPSF 186
L LDLS N+ G VP F
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPF 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSL 163
++G IP IG+L L L LSNN F+G IP+ + +L +L LN N G IP ++
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 109 GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQ 168
GH ++ LD+S N +G IP + + L L L +N ++G+IP + ++
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Query: 169 LAFLDLSYNNLSGPVP 184
L LDLS N L G +P
Sbjct: 679 LNILDLSSNKLDGRIP 694
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 32 EVQALMGIKDSLHDPHDVLNNWDENSVDPCSWALVTCSDGLVTGLGAPSQNLSGTLSSSI 91
E+ L+ KD L D ++L +W N +PC++ VTC D VT + S+ L+ S++
Sbjct: 10 EIHQLISFKDVLPD-KNLLPDWSSNK-NPCTFDGVTCRDDKVTSIDLSSKPLNVGF-SAV 66
Query: 92 GXXXXXXXXXXXXXXISGHIPTEIGKL---SKLLTLDLSNNFFTGPIPSTVS--HLETLQ 146
+ HI + + L +LDLS N +GP+ + S L+
Sbjct: 67 SSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 126
Query: 147 YLRLNNNSL--TGAIPPSLSNMSQLAFLDLSYNNLSG 181
+L +++N+L G + L ++ L LDLS N++SG
Sbjct: 127 FLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSISG 162
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
ISG + ++ + L LD+S+N F+ IP + LQ+L ++ N L+G ++S
Sbjct: 187 ISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTC 243
Query: 167 SQLAFLDLSYNNLSGPVPSFHAKTF 191
++L L++S N GP+P K+
Sbjct: 244 TELKLLNISSNQFVGPIPPLPLKSL 268
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 46/148 (31%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTV--- 139
L+G + IG SG+IP E+G L+ LDL+ N F G IP+ +
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Query: 140 ------SHLETLQYLRLNNNSLT------------------------------------- 156
+ + +Y+ + N+ +
Sbjct: 559 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 618
Query: 157 GAIPPSLSNMSQLAFLDLSYNNLSGPVP 184
G P+ N + FLD+SYN LSG +P
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIP 646
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 81 QNLSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 140
++SG++ +G + G IP + L+ L +DLSNN +GPIP +
Sbjct: 663 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE-MG 721
Query: 141 HLETLQYLR-LNNNSLTG 157
ET + LNN L G
Sbjct: 722 QFETFPPAKFLNNPGLCG 739
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 114 EIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLD 173
++ +LS ++++ + G T + ++ +L ++ N L+G IP + +M L L+
Sbjct: 600 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILN 659
Query: 174 LSYNNLSGPVP 184
L +N++SG +P
Sbjct: 660 LGHNDISGSIP 670
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 15/210 (7%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V G + VA+K +K+G+ E +F E +++ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL--GAARGLLYLHEQCDPKIIHRD 424
++ YM+NG + + L+ + T++ + + + YL + + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT---VGHIAPEYLSTGQSSEKT 481
+ A N L+++ V DFGL++ + D T++ RG+ V PE L + S K+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSS-RGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 482 DVFGFGILLLELISGLRALEFGKTANQKGA 511
D++ FG+L+ E+ S L + + + N + A
Sbjct: 188 DIWAFGVLMWEIYS-LGKMPYERFTNSETA 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGG-EIQFQTEVEMI---S 351
ATS + +G G +G VYK G VA+K ++ N G I EV ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 352 LAVHRNLLRLIGFCMTT-TER----LLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGA 405
H N++RL+ C T+ T+R LV+ ++ KA P L T K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG 465
RGL +LH C I+HRD+K NIL+ + DFGLA++ + + V T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLW 176
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
+ APE L + D++ G + E+ A+Q G + D +
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVK----------RLKDGNAIGGEIQFQTEVEMISLAVH 355
+V K G G + YL + T++ +K R K+ +F+ EV S H
Sbjct: 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK----RFEREVHNSSQLSH 70
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
+N++ +I LV Y+ +++ +++ L T G+ + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH-- 128
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
D +I+HRD+K NIL+D + DFG+AK L T V GTV + +PE
Sbjct: 129 -DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 476 QSSEKTDVFGFGILLLELISG 496
+ E TD++ GI+L E++ G
Sbjct: 188 ATDECTDIYSIGIVLYEMLVG 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGG-EIQFQTEVEMI---S 351
ATS + +G G +G VYK G VA+K ++ N G I EV ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 352 LAVHRNLLRLIGFCMTT-TER----LLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGA 405
H N++RL+ C T+ T+R LV+ ++ KA P L T K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG 465
RGL +LH C I+HRD+K NIL+ + DFGLA++ + + V T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLW 176
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
+ APE L + D++ G + E+ A+Q G + D +
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 107 ISGHIPTEIGKLS-KLLTLDLSNNFFTGPI-PSTVSHLE-TLQYLRLNNNSLTGAIPPSL 163
SG +P + LS LLTLDLS+N F+GPI P+ + + TLQ L L NN TG IPP+L
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 164 SNMSQLAFLDLSYNNLSGPVPS 185
SN S+L L LS+N LSG +PS
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPS 436
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+SG+IP EIG + L L+L +N +G IP V L L L L++N L G IP ++S +
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703
Query: 167 SQLAFLDLSYNNLSGPVP 184
+ L +DLS NNLSGP+P
Sbjct: 704 TMLTEIDLSNNNLSGPIP 721
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHL 142
LSGT+ SS+G + G IP E+ + L TL L N TG IPS +S+
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 143 ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 185
L ++ L+NN LTG IP + + LA L LS N+ SG +P+
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+SG IP+ +G LSKL L L N G IP + +++TL+ L L+ N LTG IP LSN
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 167 SQLAFLDLSYNNLSGPVPSFHAKTFNI 193
+ L ++ LS N L+G +P + + N+
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENL 516
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
++G IP+ + + L + LSNN TG IP + LE L L+L+NNS +G IP L +
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 167 SQLAFLDLSYNNLSGPVPS 185
L +LDL+ N +G +P+
Sbjct: 538 RSLIWLDLNTNLFNGTIPA 556
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+G IP + S+L++L LS N+ +G IPS++ L L+ L+L N L G IP L +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Query: 167 SQLAFLDLSYNNLSGPVPS 185
L L L +N+L+G +PS
Sbjct: 466 KTLETLILDFNDLTGEIPS 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHL 142
LSG + IG ISG IP E+G L L LDLS+N G IP +S L
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703
Query: 143 ETLQYLRLNNNSLTGAIP 160
L + L+NN+L+G IP
Sbjct: 704 TMLTEIDLSNNNLSGPIP 721
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
+SG I ++L L++S+N F GPIP L++LQYL L N TG IP LS
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 167 SQ-LAFLDLSYNNLSGPVPSFHA 188
L LDLS N+ G VP F
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFG 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSL 163
++G IP IG+L L L LSNN F+G IP+ + +L +L LN N G IP ++
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 109 GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQ 168
GH ++ LD+S N +G IP + + L L L +N ++G+IP + ++
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 169 LAFLDLSYNNLSGPVP 184
L LDLS N L G +P
Sbjct: 682 LNILDLSSNKLDGRIP 697
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 32 EVQALMGIKDSLHDPHDVLNNWDENSVDPCSWALVTCSDGLVTGLGAPSQNLSGTLSSSI 91
E+ L+ KD L D ++L +W N +PC++ VTC D VT + S+ L+ S++
Sbjct: 13 EIHQLISFKDVLPD-KNLLPDWSSNK-NPCTFDGVTCRDDKVTSIDLSSKPLNVGF-SAV 69
Query: 92 GXXXXXXXXXXXXXXISGHIPTEIGKL---SKLLTLDLSNNFFTGPIPSTVS--HLETLQ 146
+ HI + + L +LDLS N +GP+ + S L+
Sbjct: 70 SSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 129
Query: 147 YLRLNNNSL--TGAIPPSLSNMSQLAFLDLSYNNLSG 181
+L +++N+L G + L ++ L LDLS N++SG
Sbjct: 130 FLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSISG 165
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNM 166
ISG + ++ + L LD+S+N F+ IP + LQ+L ++ N L+G ++S
Sbjct: 190 ISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTC 246
Query: 167 SQLAFLDLSYNNLSGPVPSFHAKTF 191
++L L++S N GP+P K+
Sbjct: 247 TELKLLNISSNQFVGPIPPLPLKSL 271
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 46/148 (31%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTV--- 139
L+G + IG SG+IP E+G L+ LDL+ N F G IP+ +
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Query: 140 ------SHLETLQYLRLNNNSLT------------------------------------- 156
+ + +Y+ + N+ +
Sbjct: 562 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 621
Query: 157 GAIPPSLSNMSQLAFLDLSYNNLSGPVP 184
G P+ N + FLD+SYN LSG +P
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIP 649
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 81 QNLSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 140
++SG++ +G + G IP + L+ L +DLSNN +GPIP +
Sbjct: 666 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE-MG 724
Query: 141 HLETLQYLR-LNNNSLTG 157
ET + LNN L G
Sbjct: 725 QFETFPPAKFLNNPGLCG 742
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 114 EIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLD 173
++ +LS ++++ + G T + ++ +L ++ N L+G IP + +M L L+
Sbjct: 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILN 662
Query: 174 LSYNNLSGPVP 184
L +N++SG +P
Sbjct: 663 LGHNDISGSIP 673
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 307 VGKGGFGNVYKGYL---QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIG 363
+G G FG+V +G + VA+K LK G + E +++ + ++RLIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 364 FCMTTTERLLVYPYMSNGSVASR--LKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
C E L++ M+ G + + + + + + + G+ YL E+ +
Sbjct: 78 VC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFV 132
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT--TAVRGTVGHIAPEYLSTGQSSE 479
HRD+ A N+LL + A + DFGL+K L DS+ T +A + + APE ++ + S
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 480 KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
++DV+ +G+ + E AL +G+ +K + + I Q K++E
Sbjct: 193 RSDVWSYGVTMWE------ALSYGQKPYKKMKGPEVMAFIEQGKRME 233
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 187
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 307 VGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G+G FG V Y D G +VAVK LK ++ E++++ H ++++
Sbjct: 39 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 361 LIGFC--MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C LV Y+ GS+ L + S+ A A G+ YLH Q
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ--- 153
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR----GTVGHIAPEYLST 474
IHRD+ A N+LLD +GDFGLAK + + H VR V APE L
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 475 GQSSEKTDVFGFGILLLELIS 495
+ +DV+ FG+ L EL++
Sbjct: 212 YKFYYASDVWSFGVTLYELLT 232
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGG-EIQFQTEVEMI---S 351
ATS + +G G +G VYK G VA+K ++ N G I EV ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 352 LAVHRNLLRLIGFCMTT-TER----LLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGA 405
H N++RL+ C T+ T+R LV+ ++ KA P L T K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG 465
RGL +LH C I+HRD+K NIL+ + DFGLA++ + V T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALDPVVVTLW 176
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
+ APE L + D++ G + E+ A+Q G + D +
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 351
+N +G G FG V + G ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK-------PSLDWA-----TRK 399
L H N++ L+G C L++ Y G + + L+ K P+ A TR
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 400 RIALGA--ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHV 456
+ + A+G+ +L + IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 166 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
R V +APE + + ++DV+ +GILL E+ S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + ++ H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 300 NFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS-L 352
N ++G G FG V G + G VAVK LK+ +E++M++ L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK------PSLDWATRKRI----- 401
H N++ L+G C + L++ Y G + + L++K +++ +KR+
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 402 ------------ALGAARGLLYLH-EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK- 447
A A+G+ +L + C +HRD+ A N+L+ + DFGLA+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
++ + V R V +APE L G + K+DV+ +GILL E+ S
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 305 NLVGKGGFGNVYKGYLQ-DGTVVAVK-----RLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+ +G G FG V G + G VAVK +++ + +G + + E++ + L H ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG---KIRREIQNLKLFRHPHI 78
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
++L T ++ +V Y+S G + + LD +R+ G+ Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QS 477
++HRD+K N+LLD + A + DFGL+ ++ D G+ + APE +S +
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 478 SEKTDVFGFGILLLELISG 496
+ D++ G++L L+ G
Sbjct: 194 GPEVDIWSSGVILYALLCG 212
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 184
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 185
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 184
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 137
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 138 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 193
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 44/228 (19%)
Query: 300 NFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F L+G GGFG V+K + DG ++R+K N + + EV+ ++ H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-----KAEREVKALAKLDHVNI 67
Query: 359 LRLIGFCM--------TTTERLLVYPYM-SNGSVASRLKAKPSL------------DWAT 397
+ G C T+ + L Y N +SR K K W
Sbjct: 68 VHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 398 RKR-------IAL----GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA 446
++R +AL +G+ Y+H + K+IHRD+K +NI L + + +GDFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 447 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 494
L + T +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 184 TSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 307 VGKGGFGNVYKGYL---QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIG 363
+G G FG+V +G + VA+K LK G + E +++ + ++RLIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 364 FCMTTTERLLVYPYMSNGSVASR--LKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
C E L++ M+ G + + + + + + + G+ YL E+ +
Sbjct: 404 VCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFV 458
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT--TAVRGTVGHIAPEYLSTGQSSE 479
HR++ A N+LL + A + DFGL+K L DS+ T +A + + APE ++ + S
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 480 KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526
++DV+ +G+ + E AL +G+ +K + + I Q K++E
Sbjct: 519 RSDVWSYGVTMWE------ALSYGQKPYKKMKGPEVMAFIEQGKRME 559
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 129
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 190 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 222
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 185
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 31/268 (11%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ + SLD A+ A + L YL + + +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSSE 479
HRD+ A N+L+ +GDFGL++ ++ DS A +G + +APE ++ + +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 480 KTDVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 538
+DV+ FG+ + E L+ G++ + G N D + +I ++L M +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ-GVKNN------DVIGRIENGERLPMPPNCP------ 238
Query: 539 RIELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 239 ----PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G V + VAVK + A+ + E+ + + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
K N+LLDE + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 484 FGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GI+L +++G L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEK 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 133
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 134 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 189
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 121
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 122 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 177
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGG----EIQFQTEVEMI- 350
ATS + +G G +G VYK G VA+K ++ N GG I EV ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 351 --SLAVHRNLLRLIGFCMTT-TER----LLVYPYMSNGSVASRLKAKPS-LDWATRKRIA 402
H N++RL+ C T+ T+R LV+ ++ KA P L T K +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRG 462
RGL +LH C I+HRD+K NIL+ + DFGLA++ + T V
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALTPVVV 181
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
T+ + APE L + D++ G + E+ A+Q G + D +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + G N D + +I ++L M +
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQ-GVKNN------DVIGRIENGERLPMPPNCP-------- 238
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 239 --PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 190
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 100 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 152
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 153 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 208
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 161
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 221
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + G N D + +I ++L M +
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQ-GVKNN------DVIGRIENGERLPMPPNCP-------- 266
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 267 --PTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 300 NFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRL-KDGNAIGGEIQ-FQTEVEMISLAVHR 356
+F NL+GKG F VY+ + G VA+K + K G +Q Q EV++ H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLK--AKPSLDWATRKRIALGAARGLLYLHE 414
++L L + + LV NG + LK KP + R + G+LYLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH-QIITGMLYLHS 130
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH-CDSHVTTAVRGTVGHIAPEYLS 473
I+HRD+ +N+LL + DFGLA L + H T GT +I+PE +
Sbjct: 131 H---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPEIAT 185
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
++DV+ G + L+ G
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIG 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 300 NFSSKNLVGKGGFGNVYKGYL--QDGTVV--AVKRLKDGNAIGGEIQ-FQTEVEMISLAV 354
F+ ++GKG FG+V + L +DG+ V AVK LK +I+ F E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 355 HRNLLRLIGFCMTTTER------LLVYPYMSNGSV-----ASRLKAKP-SLDWATRKRIA 402
H ++ +L+G + + + +++ P+M +G + ASR+ P +L T R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT-TAVR 461
+ A G+ YL + IHRD+ A N +L E V DFGL++ + D + A +
Sbjct: 144 VDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
V +A E L+ + +DV+ FG+ + E+++
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + G N D + +I ++L M +
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQ-GVKNN------DVIGRIENGERLPMPPNCP-------- 238
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 239 --PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ + SLD A+ A + L YL + + +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + G N D + +I ++L M +
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQ-GVKNN------DVIGRIENGERLPMPPNCP-------- 238
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 239 --PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 283 LGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEI 341
LG ++ +K+ + + ++++G G F V + +VA+K + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ E+ ++ H N++ L + L+ +S G + R+ K R+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANIL---LDEYYEAVVGDFGLAKLLDHCDSHVTT 458
+ YLH D I+HRD+K N+L LDE + ++ DFGL+K+ D V +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLS 176
Query: 459 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 138
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 198
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + K D + +I ++L M +
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMPPNCP-------- 243
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 244 --PTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 136
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + K D + +I ++L M +
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMPPNCP-------- 241
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 242 --PTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 283 LGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEI 341
LG ++ +K+ + + ++++G G F V + +VA+K + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ E+ ++ H N++ L + L+ +S G + R+ K R+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANIL---LDEYYEAVVGDFGLAKLLDHCDSHVTT 458
+ YLH D I+HRD+K N+L LDE + ++ DFGL+K+ D V +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLS 176
Query: 459 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 130
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + K D + +I ++L M +
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMPPNCP-------- 235
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 236 --PTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ K SLD A+ A + L YL + + +
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 135
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + K D + +I ++L M +
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMPPNCP-------- 240
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 241 --PTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNVY---KGYLQD-GTVVAVKRLKDGN-AIGGEIQFQTEVEM 349
++ S+F ++G+G FG V+ K D G + A+K LK + ++ + E ++
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
++ H +++L T + L+ ++ G + +RL + K A GL
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIA 468
+LH II+RD+K NILLDE + DFGL+K +DH + GTV ++A
Sbjct: 144 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMA 198
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE ++ S D + +G+L+ E+++G
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 283 LGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEI 341
LG ++ +K+ + + ++++G G F V + +VA+K + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ E+ ++ H N++ L + L+ +S G + R+ K R+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANIL---LDEYYEAVVGDFGLAKLLDHCDSHVTT 458
+ YLH D I+HRD+K N+L LDE + ++ DFGL+K+ D V +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLS 176
Query: 459 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 124
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 125 EGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 180
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 37/211 (17%)
Query: 305 NLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV----H 355
++G G FG V+KG ++ +G V +K ++D + G FQ + + LA+ H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHM-LAIGSLDH 92
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA---------- 405
+++RL+G C ++ +L V Y+ GS+ LD + R ALG
Sbjct: 93 AHIVRLLGLCPGSSLQL-VTQYLPLGSL---------LDHVRQHRGALGPQLLLNWGVQI 142
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT-TAVRGTV 464
A+G+ YL E ++HR++ A N+LL + V DFG+A LL D + + + +
Sbjct: 143 AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + G+ + ++DV+ +G+ + EL++
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 326 VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS 385
VAVK + A+ + E+ + + H N+++ G + L Y S G +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
R++ + +R G++YLH I HRD+K N+LLDE + DFGL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGL 150
Query: 446 AKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFG 503
A + + + + + GT+ ++APE L + +E DV+ GI+L +++G L +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWD 208
Query: 504 KTANQKGAMLDWVKK 518
+ ++ DW +K
Sbjct: 209 QPSDSCQEYSDWKEK 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 43/287 (14%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS---------LDWATRKRI---ALGAA 406
L+G C L+V + G++++ L++K + D+ T + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VRGTVG 465
+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKIHQEK 523
+APE + + ++DV+ FG+LL E+ S G + G +D + +++ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRLKEGT 264
Query: 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
++ +Y EM Q L C PS RP SE+V L
Sbjct: 265 RMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS---------LDWATRKRI---ALGAA 406
L+G C L+V + G++++ L++K + D+ T + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VRGTVG 465
+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
+APE + + ++DV+ FG+LL E+ S G + G +D ++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKID--------EEF 256
Query: 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ + + EM Q L C PS RP SE+V L
Sbjct: 257 XRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQD--GT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAV 354
++F+ ++GKG FG V L D GT + A+K LK I + T VE LA+
Sbjct: 19 TDFNFLMVLGKGSFGKVM---LADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 355 --HRNLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
L + C T +RL V Y++ G + ++ A + GL +
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTT-AVRGTVGHIAPE 470
LH++ II+RD+K N++LD + DFG+ K +H VTT GT +IAPE
Sbjct: 136 LHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPE 190
Query: 471 YLSTGQSSEKTDVFGFGILLLELISG 496
++ + D + +G+LL E+++G
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAG 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + + H + +
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 187
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMI 350
K+ + F K +G G F V + G + AVK + G E + E+ ++
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 351 SLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK---PSLDWATRKRIALGAAR 407
H N++ L + LV +S G + R+ K D +T R L A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA-- 132
Query: 408 GLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
+ YLH I+HRD+K N+L DE + ++ DFGL+K+ D V + GT
Sbjct: 133 -VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTP 186
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
G++APE L+ S+ D + G++ L+ G
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ + SLD A+ A + L YL + + +
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 513
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + K D + +I ++L M +
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMPPNCP-------- 618
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 619 --PTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG VYK ++ +V+A ++ D + + E+++++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 367 TTTERLLVYPYMSNGSV-ASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
++ + + G+V A L+ + L + + + L YLH D KIIHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 426 KAANILLDEYYEAVVGDFGLA----KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE-- 479
KA NIL + + DFG++ + + DS + GT +APE + S +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSKDRP 216
Query: 480 ---KTDVFGFGILLLEL 493
K DV+ GI L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++ G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 190
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 42/225 (18%)
Query: 291 FKELQSATSNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQT 345
FKE + ++G G FG V+KG ++ +G V +K ++D + G FQ
Sbjct: 10 FKE-----TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQA 61
Query: 346 EVEMISLAV----HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + LA+ H +++RL+G C ++ +L V Y+ GS+ LD + R
Sbjct: 62 VTDHM-LAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSL---------LDHVRQHRG 110
Query: 402 ALGA----------ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451
ALG A+G+ YL E ++HR++ A N+LL + V DFG+A LL
Sbjct: 111 ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 452 CDSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
D + + + + +A E + G+ + ++DV+ +G+ + EL++
Sbjct: 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG VYK ++ +V+A ++ D + + E+++++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 367 TTTERLLVYPYMSNGSV-ASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
++ + + G+V A L+ + L + + + L YLH D KIIHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 426 KAANILLDEYYEAVVGDFGLA----KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE-- 479
KA NIL + + DFG++ + + DS + GT +APE + S +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSKDRP 216
Query: 480 ---KTDVFGFGILLLEL 493
K DV+ GI L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 307 VGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G+G FG+V++G VA+K K+ + +F E + H ++++LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKII 421
G +T ++ + G + S L+ + SLD A+ A + L YL + + +
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 513
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 481
HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + + +
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 482 DVFGFGILLLE-LISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRI 540
DV+ FG+ + E L+ G++ + K D + +I ++L M +
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMPPNCP-------- 618
Query: 541 ELEEMVQVALLCTQYLPSLRPKMSEV 566
+ + C Y PS RP+ +E+
Sbjct: 619 --PTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + + H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 185
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L FC E+L Y NG + ++ S D + L YLH
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 156 K---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 242
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L++ M G + ++ L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + + H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 185
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++ G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 291 FKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEM 349
+K+ + + ++++G G F V + +VA+K + G E + E+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
+ H N++ L + L+ +S G + R+ K R+ +
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 129
Query: 410 LYLHEQCDPKIIHRDVKAANIL---LDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
YLH D I+HRD+K N+L LDE + ++ DFGL+K+ D V + GT G+
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTPGY 184
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE L+ S+ D + G++ L+ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+ L++ + + E +++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 109 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 161
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 162 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 217
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 39/219 (17%)
Query: 300 NFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F L+G GGFG V+K + DG +KR+K N + + EV+ ++ H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----KAEREVKALAKLDHVNI 66
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSL------------DWATRKR------ 400
+ G C + Y ++ +SR K K W ++R
Sbjct: 67 VHYNG-CWDGFD----YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 401 -IAL----GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455
+AL +G+ Y+H + K+I+RD+K +NI L + + +GDFGL L +
Sbjct: 122 VLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 494
+ +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 179 XRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 299 SNFSSKNLVGKGGFGNVYK----GYLQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 351
+N +G G FG V + G ++ V VAVK LK + +E++++S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK------PSL---------DWA 396
L H N++ L+G C L++ Y G + + L+ K PSL D
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 397 TRKRIALGAARGLLYLHEQ--------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK- 447
+ + L R LL+ Q IHRDV A N+LL + A +GDFGLA+
Sbjct: 151 DGRPLEL---RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+++ + V R V +APE + + ++DV+ +GILL E+ S
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + + H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 183
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + + H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 185
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 47/287 (16%)
Query: 305 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
L+GKG FG VY G + + ++ N + F+ EV H N++ +G
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLK-AFKREVMAYRQTRHENVVLFMGA 97
Query: 365 CMTTTERLLVYPYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHR 423
CM+ ++ ++ S ++ AK LD ++IA +G+ YLH + I+H+
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHK 154
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR---------GTVGHIAPEYLST 474
D+K+ N+ D + V+ DFGL + S V A R G + H+APE +
Sbjct: 155 DLKSKNVFYDN-GKVVITDFGLFSI-----SGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 475 GQS---------SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
S+ +DVF G + EL + +W K + +
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAR-----------------EWPFKTQPAEAI 251
Query: 526 EMLVDKDLKNNYDRIEL-EEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
+ +K N +I + +E+ + L C + RP ++++ MLE
Sbjct: 252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 307 VGKGGFGNVYKGYLQ-----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+G+G FG V G VAVK LK + + E+E++ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C L+ ++ +GS+ L K K ++ + + A+ +G+ YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 145
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ +HRD+ A N+L++ ++ +GDFGL K + D V V APE L +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 477 SSEKTDVFGFGILLLELIS 495
+DV+ FG+ L EL++
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS------------LDWATRKRI---AL 403
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VRG 462
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKIH 520
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRLK 265
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 266 EGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++ G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + + H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 190
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 307 VGKGGFGNVYKGYLQ-----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+G+G FG V G VAVK LK + + E+E++ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 362 IGFCMTTTER--LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
G C L+ ++ +GS+ L K K ++ + + A+ +G+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 133
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+ +HRD+ A N+L++ ++ +GDFGL K + D V V APE L +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 477 SSEKTDVFGFGILLLELIS 495
+DV+ FG+ L EL++
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+GKG +G V+ G + G VAVK +TE+ L H N+L I +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 367 ----TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE-----QCD 417
+ T+ L+ Y NGS+ LK+ +LD + ++A + GL +LH Q
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAK--LLDHCDSHVTTAVR-GTVGHIAPEYLST 474
P I HRD+K+ NIL+ + + D GLA + D + + R GT ++ PE L
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
Query: 475 G------QSSEKTDVFGFGILLLEL 493
QS D++ FG++L E+
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKR-----LKDGNAIGGEIQFQTEVEMISL 352
+NF + +G+G F VY+ L DG VA+K+ L D A I+ E++++
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK---EIDLLKQ 88
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARG 408
H N+++ + E +V G ++ +K K + T + +
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG--- 465
L ++H + +++HRD+K AN+ + +GD GL + S TTA VG
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF----SSKTTAAHSLVGTPY 201
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525
+++PE + + K+D++ G LL E+ + L++ +G N + KKI Q
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEM-AALQSPFYGDKMN----LYSLCKKIEQCDYP 256
Query: 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEV 566
+ D +Y EE+ Q+ +C P RP ++ V
Sbjct: 257 PLPSD-----HYS----EELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKG-YLQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+ F ++G G FG VYKG ++ +G VA+K L++ + + E +++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-------LDWATRKRIALGAA 406
+ ++ RL+G C+T+T +L+ M G + ++ L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + + H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 190
Query: 465 GHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+A E + + ++DV+ +G+ + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 139/316 (43%), Gaps = 28/316 (8%)
Query: 296 SATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISL 352
+ + + LVG+G +G V K +D G +VA+K+ D + + +I + E++++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQ 80
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLY 411
H NL+ L+ C LV+ ++ + ++ L+ P+ LD+ ++ G+ +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
H IIHRD+K NIL+ + + DFG A+ L V T + APE
Sbjct: 140 CHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPEL 195
Query: 472 L-STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI---HQE----- 522
L + + DV+ G L+ E+ G +Q ++ + + HQE
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 523 ------KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVR--MLEGDG 574
+ E+ + L+ Y ++ E ++ +A C P RP +E++ + DG
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLS-EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG 314
Query: 575 LAEKWAASQKAEATRS 590
AE+++ + + +
Sbjct: 315 FAERFSQELQLKVQKD 330
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 266
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 267 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 264
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 265 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 45/289 (15%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-----------LDWATRKRI---ALG 404
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VRGT 463
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 464 VGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKIHQ 521
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRLKE 266
Query: 522 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
++ +Y EM Q L C PS RP SE+V L
Sbjct: 267 GTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLIGFCMTTTERLLVY-PYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 255
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 256 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 264
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 265 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 19/228 (8%)
Query: 279 EEVCLGNLKRFHFKEL------QSATSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRL 331
E V L N R K+L + F +G+G +G+VYK + + G +VA+K++
Sbjct: 3 ETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
Query: 332 KDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS--RLKA 389
+ + I+ E+ ++ ++++ G T+ +V Y GSV+ RL+
Sbjct: 63 PVESDLQEIIK---EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN 119
Query: 390 KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA-KL 448
K +L I +GL YLH + IHRD+KA NILL+ A + DFG+A +L
Sbjct: 120 K-TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
Query: 449 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
D V GT +APE + + D++ GI +E+ G
Sbjct: 176 TDXMAKR--NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGT--VVAVKRLKDGNAIGGEIQFQTEVE--MISLAV 354
++F+ ++GKG FG V + GT + AVK LK I + T VE +++L
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 355 HRNLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
L + C T +RL V Y++ G + ++ A A GL +L
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
+ II+RD+K N++LD + DFG+ K + D T GT +IAPE ++
Sbjct: 460 SK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALE 501
+ D + FG+LL E+++G E
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLIGFCMTTTERLLVY-PYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 255
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 256 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAVR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + D R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 264
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 265 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGT--VVAVKRLKDGNAIGGEIQFQTEVE--MISLAV 354
++F+ ++GKG FG V + GT + AVK LK I + T VE +++L
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 355 HRNLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
L + C T +RL V Y++ G + ++ A A GL +L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
+ II+RD+K N++LD + DFG+ K + D T GT +IAPE ++
Sbjct: 139 SK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALE 501
+ D + FG+LL E+++G E
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 301
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 302 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLIGFCMTTTERLLVY-PYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 255
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 256 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 307 VGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGF 364
+G+G F VYKG + TV VA L+D E Q F+ E E + H N++R
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 365 CMTTTER----LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+T + +LV ++G++ + LK + +GL +LH + P I
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT-PPI 152
Query: 421 IHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE 479
IHRD+K NI + +V +GD GLA L + AV GT APE + E
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFXAPEXYEE-KYDE 208
Query: 480 KTDVFGFGILLLE 492
DV+ FG LE
Sbjct: 209 SVDVYAFGXCXLE 221
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 307 VGKGGFGNVYKG--YLQDGT----VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 359
+G+G FG V + + D T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 360 RLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPS-------------LDWATRKRI---A 402
L+G C L+V + G++++ L++K + D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 403 LGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-VR 461
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKKI 519
+ +APE + + ++DV+ FG+LL E+ S G + G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRRL 255
Query: 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ ++ +Y EM Q L C PS RP SE+V L
Sbjct: 256 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG VYK ++ +V+A ++ D + + E+++++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 367 TTTERLLVYPYMSNGSV-ASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
++ + + G+V A L+ + L + + + L YLH D KIIHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 426 KAANILLDEYYEAVVGDFGLA----KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE-- 479
KA NIL + + DFG++ + + D + GT +APE + S +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSKDRP 216
Query: 480 ---KTDVFGFGILLLEL 493
K DV+ GI L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+S+ +D++ G ++ +L++GL G
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGYLQDGT----VVAVKRLKDGN-AIGGEIQFQTEVEM 349
++ S F ++G+G FG V+ G+ + A+K LK + ++ + E ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
+ H +++L T + L+ ++ G + +RL + K A L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIA 468
+LH II+RD+K NILLDE + DFGL+K +DH + GTV ++A
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMA 194
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE ++ ++ D + FG+L+ E+++G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 307 VGKGGFGNV--YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
+G+GGF V +G L DG A+KR+ E + Q E +M L H N+LRL+ +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDRE-EAQREADMHRLFNHPNILRLVAY 94
Query: 365 CM----TTTERLLVYPYMSNGSVASRL-KAKPSLDWATRKRI---ALGAARGLLYLHEQC 416
C+ E L+ P+ G++ + + + K ++ T +I LG RGL +H +
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK- 153
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFG-LAKLLDHCDSHVT-------TAVRGTVGHIA 468
HRD+K NILL + + V+ D G + + H + A R T+ + A
Sbjct: 154 --GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 469 PEYLSTGQS---SEKTDVFGFGILLLELISG 496
PE S E+TDV+ G +L ++ G
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 305 NLVGKGGFGNVYKGYLQ-DGTVVAVK-----RLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+ +G G FG V G Q G VAVK +++ + +G + + E++ + L H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG---KIKREIQNLKLFRHPHI 73
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
++L T T+ +V Y+S G + + ++ +R+ + Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM-- 131
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QS 477
++HRD+K N+LLD + A + DFGL+ ++ D G+ + APE +S +
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 478 SEKTDVFGFGILLLELISG 496
+ D++ G++L L+ G
Sbjct: 189 GPEVDIWSCGVILYALLCG 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 90
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 91 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 146
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKGYLQDGT----VVAVKRLKDGN-AIGGEIQFQTEVEM 349
++ S F ++G+G FG V+ G+ + A+K LK + ++ + E ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
+ H +++L T + L+ ++ G + +RL + K A L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIA 468
+LH II+RD+K NILLDE + DFGL+K +DH + GTV ++A
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMA 194
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE ++ ++ D + FG+L+ E+++G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGT----VVAVKRLKDGN-AIGGEIQFQTEVEMISLA 353
S F ++G+G FG V+ G+ + A+K LK + ++ + E +++
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
H +++L T + L+ ++ G + +RL + K A L +LH
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYL 472
II+RD+K NILLDE + DFGL+K +DH + GTV ++APE +
Sbjct: 145 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVV 199
Query: 473 STGQSSEKTDVFGFGILLLELISG 496
+ ++ D + FG+L+ E+++G
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 92
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 93 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 148
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 92
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 93 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 148
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L A GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGG--EIQFQTEVEMIS 351
+ S+F ++GKG FG V + + AVK L+ + E +E ++
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 352 LAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL 410
V L + F T ++L V Y++ G + L+ + + A A L
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-LDHCDSHVTTAVRGTVGHIAP 469
YLH I++RD+K NILLD V+ DFGL K ++H + T+ GT ++AP
Sbjct: 154 YLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAP 208
Query: 470 EYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
E L D + G +L E++ GL TA +L+
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 310 GGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 369
G FG VYK ++ +V+A ++ D + + E+++++ H N+++L+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 370 ERLLVYPYMSNGSV-ASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAA 428
++ + + G+V A L+ + L + + + L YLH D KIIHRD+KA
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 137
Query: 429 NILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDV 483
NIL + + DFG++ + GT +APE + S + K DV
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 484 FGFGILLLEL 493
+ GI L+E+
Sbjct: 198 WSLGITLIEM 207
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 307 VGKGGFGN-VYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGF 364
+G+G FG + +DG +K + E + + EV +++ H N+++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 365 CMTTTERLLVYPYMSNGSVASRLKAKPS--------LDWATRKRIALGAARGLLYLHEQC 416
+V Y G + R+ A+ LDW + +AL ++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------HVH--- 142
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
D KI+HRD+K+ NI L + +GDFG+A++L+ + A GT +++PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYLSPEICENKP 201
Query: 477 SSEKTDVFGFGILLLELISGLRALEFGKTAN 507
+ K+D++ G +L EL + A E G N
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKN 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 307 VGKGGFGNVYKG--YLQDGTVVAVKRLKDGNAIGG----EIQFQTEVEMISLAVHRNLLR 360
+G+G +G V+K G VA+KR++ G I+ + + H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 361 LIGFCMTT-----TERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHE 414
L C + T+ LV+ ++ K +P + T K + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 474
+++HRD+K NIL+ + + DFGLA++ + T+V T+ + APE L
Sbjct: 139 H---RVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
+ D++ G + E+ +Q G +LD +
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F +G+GGFG V++ + D A+KR++ N + EV+ ++ H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 358 LLRLIGFCM--TTTERLL-----VYPYMSNGSVASRLKAKPSL-DWAT-------RKR-- 400
++R + TTE+L VY Y + +L K +L DW R+R
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLY-----IQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 401 ---IALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 457
I L A + +LH + ++HRD+K +NI VGDFGL +D + T
Sbjct: 120 CLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 458 -----------TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 494
T GT +++PE + S K D+F G++L EL+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 305 NLVGKGGFGNVYKGYLQ-DGTVVAVK-----RLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+ +G G FG V G Q G VAVK +++ + +G + + E++ + L H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG---KIKREIQNLKLFRHPHI 73
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
++L T T+ +V Y+S G + + ++ +R+ + Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM-- 131
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QS 477
++HRD+K N+LLD + A + DFGL+ ++ D G+ + APE +S +
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 478 SEKTDVFGFGILLLELISG 496
+ D++ G++L L+ G
Sbjct: 189 GPEVDIWSCGVILYALLCG 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISL 352
Q + VG+G +G VYK G +VA+KR++ D G E+ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N++ LI + LV+ +M + K L + K RG+ +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H+ +I+HRD+K N+L++ + DFGLA+ T V T+ + AP+ L
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 473 -STGQSSEKTDVFGFGILLLELISG 496
+ + S D++ G + E+I+G
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 434
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 435 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 490
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 82
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 83 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 138
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISL 352
Q + VG+G +G VYK G +VA+KR++ D G E+ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N++ LI + LV+ +M + K L + K RG+ +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H+ +I+HRD+K N+L++ + DFGLA+ T V T+ + AP+ L
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 473 -STGQSSEKTDVFGFGILLLELISG 496
+ + S D++ G + E+I+G
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G G FG V KGY Q VV + + N + + E ++ + ++R+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIH 422
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 134
Query: 423 RDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 480
RD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 481 TDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
+DV+ FG+L+ E S + G ++ AML+
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 435
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 436 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 491
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 72
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 73 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 128
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 307 VGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G FG V KGY Q V +K + A+ E+ E ++ + ++R
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 70
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+IG C + +LV G + L+ + + + G+ YL E
Sbjct: 71 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 126
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT--VGHIAPEYLSTGQSS 478
+HRD+ A N+LL + A + DFGL+K L +++ G V APE ++ + S
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
K+DV+ FG+L+ E S + G ++ AML+
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--LIG 363
+GKGGF ++ D V ++ + + Q E + +++HR+L ++G
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 103
Query: 364 FCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
F + V+ + S + R KA +P + R+ I LG YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQ----YLHRN 158
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
++IHRD+K N+ L+E E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 159 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKK 214
Query: 476 QSSEKTDVFGFGILLLELISGLRALE 501
S + DV+ G ++ L+ G E
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--LIG 363
+GKGGF ++ D V ++ + + Q E + +++HR+L ++G
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 85
Query: 364 FCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
F + V+ + S + R KA +P + R+ I LG YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQ----YLHRN 140
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
++IHRD+K N+ L+E E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 141 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKK 196
Query: 476 QSSEKTDVFGFGILLLELISGLRALE 501
S + DV+ G ++ L+ G E
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
S+F ++G+G FG V K D A+K+++ I +EV +++ H+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVMLLASLNHQY 63
Query: 358 LLRLIG-------FC--MTTTER----LLVYPYMSNGSV-----ASRLKAKPSLDWATRK 399
++R F MT ++ + Y NG++ + L + W +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 400 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC------D 453
+I L Y+H Q IIHRD+K NI +DE +GDFGLAK + D
Sbjct: 124 QIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 454 SH--------VTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 494
S +T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 177 SQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L + GT +++PE L+
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ K +G GGFG V + QD G VA+K+ + + ++ E++++ H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 360 RL------IGFCMTTTERLLVYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLL 410
+ LL Y G + L + L + + + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVG---DFGLAKLLDHCDSHVTTAVRGTVGHI 467
YLHE +IIHRD+K NI+L + ++ D G AK LD + T GT+ ++
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFVGTLQYL 190
Query: 468 APEYLSTGQSSEKTDVFGFGILLLELISGLRAL 500
APE L + + D + FG L E I+G R
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+ K +G GGFG V + QD G VA+K+ + + ++ E++++ H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 360 RL------IGFCMTTTERLLVYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLL 410
+ LL Y G + L + L + + + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVG---DFGLAKLLDHCDSHVTTAVRGTVGHI 467
YLHE +IIHRD+K NI+L + ++ D G AK LD + T GT+ ++
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFVGTLQYL 191
Query: 468 APEYLSTGQSSEKTDVFGFGILLLELISGLRAL 500
APE L + + D + FG L E I+G R
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--LIG 363
+GKGGF ++ D V ++ + + Q E + +++HR+L ++G
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 105
Query: 364 FCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
F + V+ + S + R KA +P + R+ I LG YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQ----YLHRN 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
++IHRD+K N+ L+E E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 161 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKK 216
Query: 476 QSSEKTDVFGFGILLLELISGLRALE 501
S + DV+ G ++ L+ G E
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--LIG 363
+GKGGF ++ D V ++ + + Q E + +++HR+L ++G
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 81
Query: 364 FCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
F + V+ + S + R KA +P + R+ I LG YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQ----YLHRN 136
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
++IHRD+K N+ L+E E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKK 192
Query: 476 QSSEKTDVFGFGILLLELISGLRALE 501
S + DV+ G ++ L+ G E
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--LIG 363
+GKGGF ++ D V ++ + + Q E + +++HR+L ++G
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 81
Query: 364 FCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
F + V+ + S + R KA +P + R+ I LG YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQ----YLHRN 136
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
++IHRD+K N+ L+E E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKK 192
Query: 476 QSSEKTDVFGFGILLLELISGLRALE 501
S + DV+ G ++ L+ G E
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 17/235 (7%)
Query: 294 LQSATSNFSSKNLVGKGGFGNVYKG--YLQDGTVVAVKRLKDGNAIGG----EIQFQTEV 347
L A + +G+G +G V+K G VA+KR++ G I+ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 348 EMISLAVHRNLLRLIGFCMTT-----TERLLVYPYMSNGSVASRLKA-KPSLDWATRKRI 401
+ H N++RL C + T+ LV+ ++ K +P + T K +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR 461
RGL +LH +++HRD+K NIL+ + + DFGLA++ + T+V
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVV 180
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
T+ + APE L + D++ G + E+ +Q G +LD +
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 129 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 128 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 307 VGKGGFGNVYKG--YLQDGTVVAVKRLKDGNAIGG-------EIQFQTEVEMISLAVHRN 357
+G+G +G V+K G VA+KR++ G E+ +E H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 358 LLRLIGFCMTT-----TERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLY 411
++RL C + T+ LV+ ++ K +P + T K + RGL +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH +++HRD+K NIL+ + + DFGLA++ + T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVVVTLWYRAPEV 190
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
L + D++ G + E+ +Q G +LD +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+G G FG V KGY Q VV + + N + + E ++ + ++R+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 363 GFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIH 422
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 134
Query: 423 RDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK 480
RD+ A N+LL + A + DFGL+K L D T + V APE ++ + S K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 481 TDVFGFGILLLELISGLRALEFGKTANQKGAMLD 514
+DV+ FG+L+ E S + G ++ AML+
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR--LIG 363
+GKGGF ++ D V ++ + + Q E + +++HR+L ++G
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 79
Query: 364 FCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQ 415
F + V+ + S + R KA +P + R+ I LG YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQ----YLHRN 134
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
++IHRD+K N+ L+E E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 135 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKK 190
Query: 476 QSSEKTDVFGFGILLLELISGLRALE 501
S + DV+ G ++ L+ G E
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 8/224 (3%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLK 332
+EQ+R+ + ++ EL+ +F + +G G G V+K + G V+A K +
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 102
Query: 333 DGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPS 392
Q E++++ ++ G + E + +M GS+ LK
Sbjct: 103 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 162
Query: 393 LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452
+ ++++ +GL YL E+ KI+HRDVK +NIL++ E + DFG++ L
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--I 218
Query: 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
DS + V GT +++PE L S ++D++ G+ L+E+ G
Sbjct: 219 DSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 8/227 (3%)
Query: 271 FDVNEQRREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYK-GYLQDGTVVAVK 329
+++EQ+R+ + ++ EL+ +F + +G G G V+K + G V+A K
Sbjct: 7 LELDEQQRKRLEAFLTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK 64
Query: 330 RLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKA 389
+ Q E++++ ++ G + E + +M GS+ LK
Sbjct: 65 LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 124
Query: 390 KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449
+ ++++ +GL YL E+ KI+HRDVK +NIL++ E + DFG++ L
Sbjct: 125 AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182
Query: 450 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
DS + V GT +++PE L S ++D++ G+ L+E+ G
Sbjct: 183 --IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 126 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 127 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 213
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L + GT +++PE L+
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 13/237 (5%)
Query: 293 ELQSATSN-FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVE 348
E Q T N F ++GKGGFG V ++ G + A K+L+ GE E +
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--A 406
++ R ++ L T LV M+ G + + + + + A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR-GTVG 465
GL LH + +I++RD+K NILLD++ + D GLA H T R GTVG
Sbjct: 297 CGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGRVGTVG 350
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
++APE + + + D + G LL E+I+G + K ++ + VK++ +E
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
+GKG FG V++G + G VAVK E + E E+ + H N+L I
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 365 CM----TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
T T+ LV Y +GS+ L + ++ ++AL A GL +LH Q
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + D GLA D + A VG ++APE L
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S ++ D++ G++ E+
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI 350
+ Q+ ++ + +G G G V+K + + G V+AVK+++ + +++++
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77
Query: 351 SLAVHR--NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATR--KRIALGAA 406
L H +++ G +T T+ + M G+ A +LK + R ++ +
Sbjct: 78 -LKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIV 134
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+ L YL E+ +IHRDVK +NILLDE + + DFG++ L D G +
Sbjct: 135 KALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKAKDRSAGCAAY 190
Query: 467 IAPEYLSTGQSSE-----KTDVFGFGILLLELISG 496
+APE + ++ + DV+ GI L+EL +G
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
+GKG FG V++G + G VAVK E + E E+ + H N+L I
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 365 CM----TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
T T+ LV Y +GS+ L + ++ ++AL A GL +LH Q
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + D GLA D + A VG ++APE L
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S ++ D++ G++ E+
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 13/237 (5%)
Query: 293 ELQSATSN-FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVE 348
E Q T N F ++GKGGFG V ++ G + A K+L+ GE E +
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA--A 406
++ R ++ L T LV M+ G + + + + + A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR-GTVG 465
GL LH + +I++RD+K NILLD++ + D GLA H T R GTVG
Sbjct: 297 CGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGRVGTVG 350
Query: 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522
++APE + + + D + G LL E+I+G + K ++ + VK++ +E
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAG 240
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
+GKG FG V++G + G VAVK E + E E+ + H N+L I
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 365 CM----TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
T T+ LV Y +GS+ L + ++ ++AL A GL +LH Q
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + D GLA D + A VG ++APE L
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S ++ D++ G++ E+
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY 436
+M GS+ LK + ++++ RGL YL E+ +I+HRDVK +NIL++
Sbjct: 95 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRG 152
Query: 437 EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
E + DFG++ L DS + V GT ++APE L S ++D++ G+ L+EL G
Sbjct: 153 EIKLCDFGVSGQL--IDSMANSFV-GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--H 143
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++PE L S
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHYS 200
Query: 479 EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516
++D++ G+ L+E+ G + G + +LD++
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 133 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
+GKG FG V++G + G VAVK E + E E+ + H N+L I
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 365 ----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
T T+ LV Y +GS+ L + ++ ++AL A GL +LH Q
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + D GLA D + A VG ++APE L
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S ++ D++ G++ E+
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
+GKG FG V++G + G VAVK E + E E+ + H N+L I
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 365 ----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
T T+ LV Y +GS+ L + ++ ++AL A GL +LH Q
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + D GLA D + A VG ++APE L
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S ++ D++ G++ E+
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGF 364
+GKG FG V++G + G VAVK E + E E+ + H N+L I
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 365 ----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH-----EQ 415
T T+ LV Y +GS+ L + ++ ++AL A GL +LH Q
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG---HIAPEYL 472
P I HRD+K+ NIL+ + + D GLA D + A VG ++APE L
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 473 STG------QSSEKTDVFGFGILLLEL 493
+S ++ D++ G++ E+
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVH 355
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 356 RNLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++L F E+L Y NG + ++ S D + L YLH
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLS 473
+ IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGN-VYKGYLQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 356
+F ++G+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 357 NLLRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++L F E+L Y NG + ++ S D + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEYLST 474
IIHRD+K NILL+E + DFG AK+L GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFG 503
+ + +D++ G ++ +L++GL G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 300 NFSSKNLVGKGGFGNVY--KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
F ++G G F V+ K L G + A+K +K A + E+ ++ H N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDS-SLENEIAVLKKIKHEN 67
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
++ L +TT LV +S G + R+ + + + YLHE
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN-- 125
Query: 418 PKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 474
I+HRD+K N+L +E + ++ DFGL+K+ + + + GT G++APE L+
Sbjct: 126 -GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ---NGIMSTACGTPGYVAPEVLAQ 181
Query: 475 GQSSEKTDVFGFGILLLELISG 496
S+ D + G++ L+ G
Sbjct: 182 KPYSKAVDCWSIGVITYILLCG 203
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VAVK + +Q EV ++ +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A + +++ A R ++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSA 125
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
+ C K I+HRD+KA N+LLD + DFG + + + A G + APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPE- 182
Query: 472 LSTGQSSE--KTDVFGFGILLLELISG 496
L G+ + + DV+ G++L L+SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VAVK + +Q EV ++ +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A + +++ A R ++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSA 125
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
+ C K I+HRD+KA N+LLD + DFG + + T G+ + APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE- 182
Query: 472 LSTGQSSE--KTDVFGFGILLLELISG 496
L G+ + + DV+ G++L L+SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VAVK + +Q EV ++ +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A + +++ A R ++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSA 125
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
+ C K I+HRD+KA N+LLD + DFG + + T G+ + APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE- 182
Query: 472 LSTGQSSE--KTDVFGFGILLLELISG 496
L G+ + + DV+ G++L L+SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 305 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL--L 359
+GKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 48 RFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 360 RLIGFCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLY 411
++GF + VY + S + R KA +P + R+ I +G+ Y
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQY 157
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH ++IHRD+K N+ L++ + +GDFGLA ++ D + GT +IAPE
Sbjct: 158 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKTLCGTPNYIAPEV 213
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
L S + D++ G +L L+ G E
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-- 124
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++PE L S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHYS 181
Query: 479 EKTDVFGFGILLLELISG 496
++D++ G+ L+E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVG 199
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 305 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL--L 359
+GKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 48 RFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 360 RLIGFCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLY 411
++GF + VY + S + R KA +P + R+ I +G+ Y
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQY 157
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH ++IHRD+K N+ L++ + +GDFGLA ++ D + GT +IAPE
Sbjct: 158 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNYIAPEV 213
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
L S + D++ G +L L+ G E
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-- 124
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++PE L S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHYS 181
Query: 479 EKTDVFGFGILLLELISG 496
++D++ G+ L+E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVG 199
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 306 LVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
++GKG +G VY G L + +A+K + + ++ + E+ + H+N+++ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLG- 86
Query: 365 CMTTTERLLVYPYMSN---GSVASRLKAKPSLDWATRKRIALGAAR---GLLYLHEQCDP 418
+ +E + +M GS+++ L++K + I + GL YLH D
Sbjct: 87 --SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DN 141
Query: 419 KIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+HRD+K N+L++ Y + + DFG +K L + T GT+ ++APE + G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPR 200
Query: 478 --SEKTDVFGFGILLLELISG 496
+ D++ G ++E+ +G
Sbjct: 201 GYGKAADIWSLGCTIIEMATG 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 307 VGKGGFGNVYK----GYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLL 359
+G G FG V + G ++ VAVK LK + +E++++S L H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---------------- 403
L+G C L++ Y G + + L+ K ++ A+
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 404 --GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
R V +APE + + ++DV+ +GI L EL S G ++ G +D
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 270
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K ++ + + EM + C P RP ++V+++E
Sbjct: 271 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 294 LQSATSNFSSK----NLVGKGGFGNVY----KGYLQDGTVVAVKRLKDGNAIGGEIQFQT 345
+Q +T+ FS + ++GKG FG V K Q+ V + + + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLR 75
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV+++ H N+++L F LV + G + + ++ RI
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVR- 461
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ H ++ +
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKMKDKI 189
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT +IAPE L G EK DV+ G++L L+SG
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-- 124
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++PE L S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHYS 181
Query: 479 EKTDVFGFGILLLELISG 496
++D++ G+ L+E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVG 199
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 300 NFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRN 357
N+ +GKG F V ++ G VAVK + +Q EV ++ + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
+++L T LV Y S G V L A W K A R ++ + C
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GWMKEKE-ARAKFRQIVSAVQYCH 123
Query: 418 PK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
K I+HRD+KA N+LLD + DFG + + T G+ + APE L G+
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQGK 180
Query: 477 SSE--KTDVFGFGILLLELISG 496
+ + DV+ G++L L+SG
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSG 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 356
N+ +G+G FG V Y G VA+K + ++Q + E+ + L H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
++++L + E ++V Y N + + + + +R + Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 122
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG- 475
KI+HRD+K N+LLDE+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 476 QSSEKTDVFGFGILLLELISGLRALEF 502
+ + DV+ G++L ++ R L F
Sbjct: 179 YAGPEVDVWSCGVILYVMLC--RRLPF 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 11/234 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQF---QTEVEMISLAVHR 356
+F ++G+G + V L+ + R+ + + QTE + A +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 357 NLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + C T RL V Y++ G + ++ + L + + + L YLHE+
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-LDHCDSHVTTAVRGTVGHIAPEYLST 474
II+RD+K N+LLD + D+G+ K L D+ T+ GT +IAPE L
Sbjct: 173 ---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRG 227
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEF-GKTANQKGAMLDWVKKIHQEKKLEM 527
D + G+L+ E+++G + G + N D++ ++ EK++ +
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 307 VGKGGFGNVYK----GYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLL 359
+G G FG V + G ++ VAVK LK + +E++++S L H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---------------- 403
L+G C L++ Y G + + L+ K ++ A+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 404 --GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
R V +APE + + ++DV+ +GI L EL S G ++ G +D
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 277
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K ++ + + EM + C P RP ++V+++E
Sbjct: 278 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 356
N+ +G+G FG V Y G VA+K + ++Q + E+ + L H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
++++L + E ++V Y N + + + + +R + Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 131
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG- 475
KI+HRD+K N+LLDE+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 476 QSSEKTDVFGFGILLLELISGLRALEF 502
+ + DV+ G++L ++ R L F
Sbjct: 188 YAGPEVDVWSCGVILYVMLC--RRLPF 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 306 LVGKGGFGNVYKGYLQDGTV---VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 361
++GKG FG V K +D AVK + +A + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 362 IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
++ +V + G + + + RI G+ Y+H+ I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 422 HRDVKAANILLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
HRD+K NILL+ + + DFGL+ ++ + + GT +IAPE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRI-GTAYYIAPEVLR-GTYD 200
Query: 479 EKTDVFGFGILLLELISG 496
EK DV+ G++L L+SG
Sbjct: 201 EKCDVWSAGVILYILLSG 218
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 307 VGKGGFGNVYK----GYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLL 359
+G G FG V + G ++ VAVK LK + +E++++S L H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---------------- 403
L+G C L++ Y G + + L+ K ++ A+
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 404 --GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
R V +APE + + ++DV+ +GI L EL S G ++ G +D
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 254
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K ++ + + EM + C P RP ++V+++E
Sbjct: 255 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 306 LVGKGGFGNVYKGYLQDGTV---VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 361
++GKG FG V K +D AVK + +A + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 362 IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
++ +V + G + + + RI G+ Y+H+ I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 422 HRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
HRD+K NILL+ + + DFGL+ ++ + + GT +IAPE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRI-GTAYYIAPEVLR-GTYD 200
Query: 479 EKTDVFGFGILLLELISG 496
EK DV+ G++L L+SG
Sbjct: 201 EKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 306 LVGKGGFGNVYKGYLQDGTV---VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 361
++GKG FG V K +D AVK + +A + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 362 IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
++ +V + G + + + RI G+ Y+H+ I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 422 HRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
HRD+K NILL+ + + DFGL+ ++ + + GT +IAPE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRI-GTAYYIAPEVLR-GTYD 200
Query: 479 EKTDVFGFGILLLELISG 496
EK DV+ G++L L+SG
Sbjct: 201 EKCDVWSAGVILYILLSG 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 356
N+ +G+G FG V Y G VA+K + ++Q + E+ + L H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
++++L + E ++V Y N + + + + +R + Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 132
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG- 475
KI+HRD+K N+LLDE+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 476 QSSEKTDVFGFGILLLELISGLRALEF 502
+ + DV+ G++L ++ R L F
Sbjct: 189 YAGPEVDVWSCGVILYVMLC--RRLPF 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-- 124
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++PE L S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHYS 181
Query: 479 EKTDVFGFGILLLELISG 496
++D++ G+ L+E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-- 124
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++PE L S
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHYS 181
Query: 479 EKTDVFGFGILLLELISG 496
++D++ G+ L+E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVG 199
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 356
N+ +G+G FG V Y G VA+K + ++Q + E+ + L H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
++++L + E ++V Y N + + + + +R + Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 126
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG- 475
KI+HRD+K N+LLDE+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 476 QSSEKTDVFGFGILLLELISGLRALEF 502
+ + DV+ G++L ++ R L F
Sbjct: 183 YAGPEVDVWSCGVILYVMLC--RRLPF 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 305 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQF---QTEVEMISLAVHRNL--L 359
+GKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 32 RFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 360 RLIGFCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLY 411
++GF + VY + S + R KA +P + R+ I +G+ Y
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQY 141
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH ++IHRD+K N+ L++ + +GDFGLA ++ D + GT +IAPE
Sbjct: 142 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEV 197
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
L S + D++ G +L L+ G E
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 305 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL--L 359
+GKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 48 RFLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 360 RLIGFCMTTTERLLVYPYM------SNGSVASRLKA--KPSLDWATRKRIALGAARGLLY 411
++GF + VY + S + R KA +P + R+ I +G+ Y
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQY 157
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH ++IHRD+K N+ L++ + +GDFGLA ++ D + GT +IAPE
Sbjct: 158 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEV 213
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRALE 501
L S + D++ G +L L+ G E
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 294 LQSATSNFSSK----NLVGKGGFGNVY----KGYLQDGTVVAVKRLKDGNAIGGEIQFQT 345
+Q +T+ FS + ++GKG FG V K Q+ V + + + E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLR 81
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV+++ H N+++L F LV + G + + ++ RI
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 141
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRG 462
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ + S G
Sbjct: 142 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIG 196
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
T +IAPE L G EK DV+ G++L L+SG
Sbjct: 197 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G VYK G A+K+++ + G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
T +LV+ ++ + L+ T K L G+ Y H D +++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 484
K N+L++ E + DFGLA+ T V T+ + AP+ L + + S D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 485 GFGILLLELISG 496
G + E+++G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI------------------GG 339
+ ++ K+ +GKG +G V Y + D T A+K L I GG
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 340 EIQFQTEVEMISLAV-------HRNLLRLIGFCMTTTER--LLVYPYMSNGSVASRLKAK 390
IQ + +E + + H N+++L+ E +V+ ++ G V K
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 391 PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450
P + R +G+ YLH Q KIIHRD+K +N+L+ E + DFG++
Sbjct: 133 PLSEDQARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 451 HCDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISG 496
D+ ++ V GT +APE LS + S + DV+ G+ L + G
Sbjct: 189 GSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G VYK G A+K+++ + G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
T +LV+ ++ + L+ T K L G+ Y H D +++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 484
K N+L++ E + DFGLA+ T V T+ + AP+ L + + S D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 485 GFGILLLELISG 496
G + E+++G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VAV+ + +Q EV ++ +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A + +++ A R ++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSA 125
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
+ C K I+HRD+KA N+LLD + DFG + + T G+ + APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE- 182
Query: 472 LSTGQSSE--KTDVFGFGILLLELISG 496
L G+ + + DV+ G++L L+SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 294 LQSATSNFSSK----NLVGKGGFGNVY----KGYLQDGTVVAVKRLKDGNAIGGEIQFQT 345
+Q +T+ FS + ++GKG FG V K Q+ V + + + E +
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR- 98
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV+++ H N+++L F LV + G + + ++ RI
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVR- 461
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ H ++ +
Sbjct: 159 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKMKDKI 212
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT +IAPE L G EK DV+ G++L L+SG
Sbjct: 213 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VAV+ + +Q EV ++ +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A + +++ A R ++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSA 125
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLA-------KLLDHCDSHVTTAVRGTV 464
+ C K I+HRD+KA N+LLD + DFG + KL + C G+
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC---------GSP 176
Query: 465 GHIAPEYLSTGQSSE--KTDVFGFGILLLELISG 496
+ APE L G+ + + DV+ G++L L+SG
Sbjct: 177 PYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 307 VGKGGFGNVYK----GYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLL 359
+G G FG V + G ++ VAVK LK + +E++++S L H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---------------- 403
L+G C L++ Y G + + L+ K ++ A+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 404 --GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
R V +APE + + ++DV+ +GI L EL S G ++ G +D
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 277
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K ++ + + EM + C P RP ++V+++E
Sbjct: 278 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVHRNLLRLIG 363
+G+G +G V+K +D G +VA+K+ + + + +I + E+ M+ H NL+ L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLE 69
Query: 364 FCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHR 423
LV+ Y + + + + + K I + + + H+ IHR
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHR 126
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLL----DHCDSHVTTAVRGTVGHIAPEYL-STGQSS 478
DVK NIL+ ++ + DFG A+LL D+ D V T + +PE L Q
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELLVGDTQYG 181
Query: 479 EKTDVFGFGILLLELISGL 497
DV+ G + EL+SG+
Sbjct: 182 PPVDVWAIGCVFAELLSGV 200
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 307 VGKGGFGNVYK----GYLQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLL 359
+G G FG V + G ++ VAVK LK + +E++++S L H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---------------- 403
L+G C L++ Y G + + L+ K ++ A+
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 404 --GAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
R V +APE + + ++DV+ +GI L EL S G ++ G +D
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 272
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571
K ++ + + EM + C P RP ++V+++E
Sbjct: 273 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 306 LVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
++GKG +G VY G L + +A+K + + ++ + E+ + H+N+++ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLG- 72
Query: 365 CMTTTERLLVYPYMSN---GSVASRLKAKPSLDWATRKRIALGAAR---GLLYLHEQCDP 418
+ +E + +M GS+++ L++K + I + GL YLH D
Sbjct: 73 --SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DN 127
Query: 419 KIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+HRD+K N+L++ Y + + DFG +K L + T GT+ ++APE + G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPR 186
Query: 478 --SEKTDVFGFGILLLELISG 496
+ D++ G ++E+ +G
Sbjct: 187 GYGKAADIWSLGCTIIEMATG 207
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 294 LQSATSNFSSK----NLVGKGGFGNVY----KGYLQDGTVVAVKRLKDGNAIGGEIQFQT 345
+Q +T+ FS + ++GKG FG V K Q+ V + + + E +
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR- 99
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV+++ H N+++L F LV + G + + ++ RI
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 159
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRG 462
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ + S G
Sbjct: 160 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIG 214
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
T +IAPE L G EK DV+ G++L L+SG
Sbjct: 215 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G +G VYK G A+K+++ + G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
T +LV+ ++ + L+ T K L G+ Y H D +++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 484
K N+L++ E + DFGLA+ T + T+ + AP+ L + + S D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 485 GFGILLLELISG 496
G + E+++G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ + +GKG F V ++ G VAVK + +Q EV ++ +
Sbjct: 11 QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A + +++ A R ++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSA 126
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
+ C K I+HRD+KA N+LLD + DFG + + T G+ + APE
Sbjct: 127 VQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPE- 183
Query: 472 LSTGQSSE--KTDVFGFGILLLELISG 496
L G+ + + DV+ G++L L+SG
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
S+F ++G+G FG V K D A+K+++ I +EV +++ H+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVMLLASLNHQY 63
Query: 358 LLRLIG-------FC--MTTTER----LLVYPYMSNGSV-----ASRLKAKPSLDWATRK 399
++R F MT ++ + Y N ++ + L + W +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 400 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC------D 453
+I L Y+H Q IIHRD+K NI +DE +GDFGLAK + D
Sbjct: 124 QIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 454 SH--------VTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 494
S +T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 177 SQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGY----LQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLA 353
F ++GKGG+G V++ G + A+K LK + + E ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
H ++ LI T + L+ Y+S G + +L+ + T + L +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
++ II+RD+K NI+L+ + DFGL K H D VT GT+ ++APE L
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHTFCGTIEYMAPEILM 194
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ D + G L+ ++++G
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGY----LQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLA 353
F ++GKGG+G V++ G + A+K LK + + E ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
H ++ LI T + L+ Y+S G + +L+ + T + L +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
++ II+RD+K NI+L+ + DFGL K H D VT GT+ ++APE L
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXFCGTIEYMAPEILM 194
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ D + G L+ ++++G
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 300 NFSSKNLVGKGGFGNVYK-GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+F + +G G G V+K + G V+A K + Q E++++ +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ G + E + +M GS+ LK + ++++ +GL YL E+
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-- 127
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
KI+HRDVK +NIL++ E + DFG++ +L+D + GT +++PE L
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERLQGTHY 183
Query: 478 SEKTDVFGFGILLLELISG 496
S ++D++ G+ L+E+ G
Sbjct: 184 SVQSDIWSMGLSLVEMAVG 202
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQF---QTEVEMISLAVH 355
+F ++G+G + V L+ + ++ + + QTE + A +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 356 RNLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
L + C T RL V Y++ G + ++ + L + + + L YLHE
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-LDHCDSHVTTAVRGTVGHIAPEYLS 473
+ II+RD+K N+LLD + D+G+ K L D+ T+ GT +IAPE L
Sbjct: 129 RG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILR 183
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEF-GKTANQKGAMLDWVKKIHQEKKLEM 527
D + G+L+ E+++G + G + N D++ ++ EK++ +
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQF---QTEVEMISLAVH 355
+F ++G+G + V L+ + ++ + + QTE + A +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 356 RNLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
L + C T RL V Y++ G + ++ + L + + + L YLHE
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-LDHCDSHVTTAVRGTVGHIAPEYLS 473
+ II+RD+K N+LLD + D+G+ K L D+ T+ GT +IAPE L
Sbjct: 125 RG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILR 179
Query: 474 TGQSSEKTDVFGFGILLLELISGLRALEF-GKTANQKGAMLDWVKKIHQEKKLEM 527
D + G+L+ E+++G + G + N D++ ++ EK++ +
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 307 VGKGGFGNVYKGY--LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
+G+G + VYKG L D +VA+K ++ + G EV ++ H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 365 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
T LV+ Y+ ++ K RGL Y H Q K++HRD
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRD 125
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-LSTGQSSEKTDV 483
+K N+L++E E + DFGLA+ V T+ + P+ L + S + D+
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGSTDYSTQIDM 184
Query: 484 FGFGILLLELISGLRALEFGKTANQK 509
+G G + E+ +G R L G T ++
Sbjct: 185 WGVGCIFYEMATG-RPLFPGSTVEEQ 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 11/234 (4%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQF---QTEVEMISLAVHR 356
+F ++G+G + V L+ + ++ + + QTE + A +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 357 NLLRLIGFCMTTTERLL-VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + C T RL V Y++ G + ++ + L + + + L YLHE+
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL-LDHCDSHVTTAVRGTVGHIAPEYLST 474
II+RD+K N+LLD + D+G+ K L D+ T+ GT +IAPE L
Sbjct: 141 ---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRG 195
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEF-GKTANQKGAMLDWVKKIHQEKKLEM 527
D + G+L+ E+++G + G + N D++ ++ EK++ +
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VAVK + +Q EV + +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKV 69
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T LV Y S G V L A +++ A R ++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGR----XKEKEARAKFRQIVSA 125
Query: 413 HEQCDPK-IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
+ C K I+HRD+KA N+LLD + DFG + + + A G + APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPE- 182
Query: 472 LSTGQSSE--KTDVFGFGILLLELISG 496
L G+ + + DV+ G++L L+SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVH 355
S + +G+G FG V+K + + G VA+K+ L + G I E++++ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 356 RNLLRLIGFCMTTTERL--------LVYPYMSN--GSVASRLKAKPSLDWATRKRIALGA 405
N++ LI C T LV+ + + + S + K +L + KR+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQML 134
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447
GL Y+H KI+HRD+KAAN+L+ + DFGLA+
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVH 355
S + +G+G FG V+K + + G VA+K+ L + G I E++++ L H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 356 RNLLRLIGFCMTTTERL--------LVYPYMSN--GSVASRLKAKPSLDWATRKRIALGA 405
N++ LI C T LV+ + + + S + K +L + KR+
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQML 133
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447
GL Y+H KI+HRD+KAAN+L+ + DFGLA+
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VA+K + +Q EV ++ +
Sbjct: 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T L+ Y S G V L A + + + Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
H++ +I+HRD+KA N+LLD + DFG + + A G + APE L
Sbjct: 131 HQK---RIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPE-L 184
Query: 473 STGQSSE--KTDVFGFGILLLELISG 496
G+ + + DV+ G++L L+SG
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVH 355
S + +G+G FG V+K + + G VA+K+ L + G I E++++ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 356 RNLLRLIGFCMTTTERL--------LVYPYMSN--GSVASRLKAKPSLDWATRKRIALGA 405
N++ LI C T LV+ + + + S + K +L + KR+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQML 134
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447
GL Y+H KI+HRD+KAAN+L+ + DFGLA+
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVH 355
S + +G+G FG V+K + + G VA+K+ L + G I E++++ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 356 RNLLRLIGFCMTTTERL--------LVYPYMSN--GSVASRLKAKPSLDWATRKRIALGA 405
N++ LI C T LV+ + + + S + K +L + KR+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQML 134
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447
GL Y+H KI+HRD+KAAN+L+ + DFGLA+
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 299 SNFSSKNLVGKGGFGNVY-----KGYLQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMI 350
NF ++G G +G V+ G+ G + A+K LK + +TE +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 351 SLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
L + + T +L L+ Y++ G + + L + T + + +
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF---TEHEVQIYVGEIV 169
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAP 469
L L II+RD+K NILLD V+ DFGL+K ++ GT+ ++AP
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 470 EYLSTGQS--SEKTDVFGFGILLLELISG 496
+ + G S + D + G+L+ EL++G
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISL 352
Q N+ +GKG F V ++ G VA+K + +Q EV ++ +
Sbjct: 8 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 67
Query: 353 AVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYL 412
H N+++L T L+ Y S G V L A + + + Y
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA-------KLLDHCDSHVTTAVRGTVG 465
H++ +I+HRD+KA N+LLD + DFG + KL C G+
Sbjct: 128 HQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---------GSPP 175
Query: 466 HIAPEYLSTGQSSE--KTDVFGFGILLLELISG 496
+ APE L G+ + + DV+ G++L L+SG
Sbjct: 176 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDG--NAIGGEIQFQTEVEMISLAVHRNLLRLIG 363
+GKG +G V+K + G VVAVK++ D N+ + F+ + + L+ H N++ L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 364 FCMTTTER--LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
+R LV+ YM + + ++A L+ ++ + + + YLH ++
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGG---LL 131
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHC--------------------DSHVTTAVR 461
HRD+K +NILL+ V DFGL++ + D + T
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 462 GTVGHIAPEY-LSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 508
T + APE L + + ++ D++ G +L E++ G T NQ
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 294 LQSATSNFSSK----NLVGKGGFGNVY----KGYLQDGTVVAVKRLKDGNAIGGEIQFQT 345
+Q +T+ FS + ++GKG FG V K Q+ V + + + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR- 75
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV+++ H N+ +L F LV + G + + ++ RI
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRG 462
G+ Y H+ KI+HRD+K N+LL+ + + DFGL+ + S G
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXKDKIG 190
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
T +IAPE L G EK DV+ G++L L+SG
Sbjct: 191 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 358
+G+G G VY + G VA++++ +Q Q + E+I + V R N+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 79
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ + + E +V Y++ GS+ + + + +D + + L +LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
++IHRD+K+ NILL + DFG + S +T V GT +APE ++
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 194
Query: 479 EKTDVFGFGILLLELISG 496
K D++ GI+ +E+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 41/223 (18%)
Query: 300 NFSSKNL-----VGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 353
+F++++L +G+G +G+V K + G ++AVKR++ + + + Q Q +++ +
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVM 75
Query: 354 VHRNLLRLIGF------------CM----TTTERLLVYPYMSNGSVASRLKAKPSLDWAT 397
+ ++ F CM T+ ++ Y Y SV + + L
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY----SVLDDVIPEEILG--- 128
Query: 398 RKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 457
+I L + L +L E KIIHRD+K +NILLD + DFG++ L DS
Sbjct: 129 --KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAK 182
Query: 458 TAVRGTVGHIAPEYLSTGQSSE----KTDVFGFGILLLELISG 496
T G ++APE + S + ++DV+ GI L EL +G
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
F ++ +G+G VY+ Q GT A+K LK + +I +TE+ ++ H N+
Sbjct: 55 FEVESELGRGATSIVYRCK-QKGTQKPYALKVLK--KTVDKKI-VRTEIGVLLRLSHPNI 110
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL----YLHE 414
++L T TE LV ++ G + R+ K +R A A + +L YLHE
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS----ERDAADAVKQILEAVAYLHE 166
Query: 415 QCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
I+HRD+K N+L + DFGL+K+++H + V GT G+ APE
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPEI 221
Query: 472 LSTGQSSEKTDVFGFGILLLELISGL 497
L + D++ GI+ L+ G
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGF 247
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIG-GEIQ-FQTEVEMISLAVHRNLLRLIG 363
+GKG FG V D + A+K + + E++ E++++ H L+ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 364 FCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHR 423
+ +V + G + L+ T K L YL Q +IIHR
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHR 139
Query: 424 DVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS---SEK 480
D+K NILLDE+ + DF +A +L ++ +TT GT ++APE S+ + S
Sbjct: 140 DMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITTMA-GTKPYMAPEMFSSRKGAGYSFA 197
Query: 481 TDVFGFGILLLELISGLRALEFGKTANQK 509
D + G+ EL+ G R + + K
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+++ ++G G FG VY+ L D G +VA+K++ G A E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 359 LRLIGFCMTTTER--------LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGL 409
+RL F ++ E+ +L Y + VA +AK +L K R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
Y+H I HRD+K N+LLD + + DFG AK L + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 190
Query: 469 PEYL-STGQSSEKTDVFGFGILLLELISG 496
PE + + DV+ G +L EL+ G
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 28/232 (12%)
Query: 287 KRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGE 340
K+ KE+ + F + +G+ FG VYKG+L + VA+K LKD
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 341 IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL------------- 387
+F+ E + + H N++ L+G +++ Y S+G + L
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 388 ---KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
K +L+ + A G+ YL ++H+D+ N+L+ + + D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 445 LAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
L + + D + + + +APE + G+ S +D++ +G++L E+ S
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 48/232 (20%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
S+F ++G+G FG V K D A+K+++ I +EV +++ H+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVXLLASLNHQY 63
Query: 358 LLRLIGFCMTTTERLLVYP---------------YMSNGSV-----ASRLKAKPSLDWAT 397
++R + R V P Y N ++ + L + W
Sbjct: 64 VVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 398 RKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC----- 452
++I L Y+H Q IIHR++K NI +DE +GDFGLAK +
Sbjct: 122 FRQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 453 -DSH--------VTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 494
DS +T+A+ GT ++A E L TG +EK D + GI+ E I
Sbjct: 175 LDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 303 SKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 361
+ L+G+G + V LQ+G AVK ++ F+ + ++N+L L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 362 IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
I F T LV+ + GS+ + ++ + + R+ A L +LH + I
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 422 HRDVKAANILLDEYYEAV----VGDFGLA---KLLDHCDSHVT---TAVRGTVGHIAPEY 471
HRD+K NIL E E V + DF L KL + C T T G+ ++APE
Sbjct: 134 HRDLKPENILC-ESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 472 LS--TGQSS---EKTDVFGFGILLLELISG 496
+ T Q++ ++ D++ G++L ++SG
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 294 LQSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAI--GGEIQFQTEVEMI 350
LQ ++ ++G+G FG V + V A+K L I F E +++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 351 SLAVHRNLLRLIGFCMTTTERLL--VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+ A +++L FC ++ L V YM G + + + K A
Sbjct: 130 AFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYD----VPEKWAKFYTAEV 183
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-----HCDSHVTTAVRGT 463
+L L +IHRDVK N+LLD++ + DFG +D HCD+ V GT
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-----GT 238
Query: 464 VGHIAPEYLST----GQSSEKTDVFGFGILLLELISG 496
+I+PE L + G + D + G+ L E++ G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+++ ++G G FG VY+ L D G +VA+K++ G A E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 359 LRLIGFCMTTTER--------LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGL 409
+RL F ++ E+ +L Y + VA +AK +L K R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
Y+H I HRD+K N+LLD + + DFG AK L + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 469 PEYL-STGQSSEKTDVFGFGILLLELISG 496
PE + + DV+ G +L EL+ G
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+++ ++G G FG VY+ L D G +VA+K++ G A E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 359 LRLIGFCMTTTER--------LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARGL 409
+RL F ++ E+ +L Y + VA +AK +L K R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
Y+H I HRD+K N+LLD + + DFG AK L + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 469 PEYL-STGQSSEKTDVFGFGILLLELISG 496
PE + + DV+ G +L EL+ G
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 358
+G+G G VY + G VA++++ +Q Q + E+I + V R N+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 79
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ + + E +V Y++ GS+ + + + +D + + L +LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
++IHRD+K+ NILL + DFG + S + V GT +APE ++
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYG 194
Query: 479 EKTDVFGFGILLLELISG 496
K D++ GI+ +E+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 358
+G+G G VY + G VA++++ +Q Q + E+I + V R N+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 80
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ + + E +V Y++ GS+ + + + +D + + L +LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
++IHR++K+ NILL + DFG + S +T V GT +APE ++
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 195
Query: 479 EKTDVFGFGILLLELISG 496
K D++ GI+ +E+I G
Sbjct: 196 PKVDIWSLGIMAIEMIEG 213
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V Y ++ G +AVK+L + +I + E+ +
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 350 ISLAVHRNLLRLIGFCMTTTE-----RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ T + + ++ + + +K + D + I
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 162
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 215
Query: 465 GHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
+ APE + T D++ G ++ EL++G
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 358
+G+G G VY + G VA++++ +Q Q + E+I + V R N+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 79
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ + + E +V Y++ GS+ + + + +D + + L +LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
++IHRD+K+ NILL + DFG + S + V GT +APE ++
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYG 194
Query: 479 EKTDVFGFGILLLELISG 496
K D++ GI+ +E+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411
+A H +++ LI +++ LV+ M G + L K +L + I + +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR---GTVGHIA 468
LH I+HRD+K NILLD+ + + DFG + C +R GT G++A
Sbjct: 216 LHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS-----CHLEPGEKLRELCGTPGYLA 267
Query: 469 PEYLSTGQSS------EKTDVFGFGILLLELISG 496
PE L ++ D++ G++L L++G
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR--LKDGNAIGGEIQFQTEVEMISLAVH 355
S + +G GG G V+ D VA+K+ L D ++ ++ E+++I H
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR---EIKIIRRLDH 67
Query: 356 RNLLRL--------------IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
N++++ +G +V YM +A+ L+ P L+ R
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHAR-LF 125
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAV 460
RGL Y+H ++HRD+K AN+ ++ E +GDFGLA+++D SH
Sbjct: 126 MYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 461 RGTVG--HIAPEYL-STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 517
G V + +P L S ++ D++ G + E+++G Q +L+ +
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 518 KIHQEKKLEML 528
+H+E + E+L
Sbjct: 243 VVHEEDRQELL 253
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 358
+G+G G VY + G VA++++ +Q Q + E+I + V R N+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 80
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+ + + E +V Y++ GS+ + + + +D + + L +LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 419 KIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS 478
++IHRD+K+ NILL + DFG + S + V GT +APE ++
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYG 195
Query: 479 EKTDVFGFGILLLELISG 496
K D++ GI+ +E+I G
Sbjct: 196 PKVDIWSLGIMAIEMIEG 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 28/307 (9%)
Query: 304 KNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEM--ISLAVHRNLLR 360
+ +G+G FG V + + VA+K + ++ + E E+ + L H ++++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T T+ ++V Y + G + + K + +R + Y H KI
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KI 129
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSE 479
+HRD+K N+LLD+ + DFGL+ ++ D + G+ + APE ++ +
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 480 KTDVFGFGILLLELISGLRALE-------FGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532
+ DV+ GI+L ++ G + F K + M D++ Q M+V
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADP 247
Query: 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEV------VRMLEGDGLAEKWAASQKAE 586
++ RI ++E+ + LRP M EV R++ G A ++ E
Sbjct: 248 MQ----RITIQEIRRDPWFNVNLPDYLRP-MEEVQGSYADSRIVSKLGEAMGFSEDYIVE 302
Query: 587 ATRSRAN 593
A RS N
Sbjct: 303 ALRSDEN 309
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEV 347
H KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRK 399
M + LL+ + + RLL + + V + +P D A ++
Sbjct: 82 PMEVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 136
Query: 400 RIALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVT 457
+A +L C + ++HRD+K NIL+D E + DFG LL V
Sbjct: 137 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VY 193
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
T GT + PE++ + ++ V+ GILL +++ G
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 291 FKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQ 344
KE+ + F + +G+ FG VYKG+L + VA+K LKD +F+
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 345 TEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----------------K 388
E + + H N++ L+G +++ Y S+G + L
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 389 AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448
K +L+ + A G+ YL ++H+D+ N+L+ + + D GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 449 LDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495
+ D + + + +APE + G+ S +D++ +G++L E+ S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 300 NFSSKNLVGKGGFGNV----YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV- 354
N+ K ++G+G V +K ++ V + G+ E+Q E + + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 355 -----HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
H N+++L T T LV+ M G + L K +L ++I +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAP 469
LH+ I+HRD+K NILLD+ + DFG + LD + +V GT ++AP
Sbjct: 138 CALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAP 192
Query: 470 EYLSTGQSS------EKTDVFGFGILLLELISG 496
E + + ++ D++ G+++ L++G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 299 SNFSSKNLVGKGGFGNV----YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 354
N+ K ++G+G V +K ++ V + G+ E+Q E + + +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 355 ------HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
H N+++L T T LV+ M G + L K +L ++I
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
+ LH+ I+HRD+K NILLD+ + DFG + LD + V GT ++A
Sbjct: 124 ICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLA 178
Query: 469 PEYLSTGQSS------EKTDVFGFGILLLELISG 496
PE + + ++ D++ G+++ L++G
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG VYK ++ +A ++ + + + E+E+++ H +++L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 367 TTTERLLVYPYMSNGSVAS------RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+ ++ + G+V + R +P + R+ + L +LH + +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 130
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLA----KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
IHRD+KA N+L+ + + DFG++ K L DS + T + E +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 477 SSEKTDVFGFGILLLEL 493
K D++ GI L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV--TTAVRGTVGHIAPEYLSTGQS 477
IIHRDVK ANIL+ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 478 SEKTDVFGFGILLLELISG 496
++DV+ G +L E+++G
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 300 NFSSKNLVGKGGFGNV----YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV- 354
N+ K ++G+G V +K ++ V + G+ E+Q E + + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 355 -----HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
H N+++L T T LV+ M G + L K +L ++I +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAP 469
LH+ I+HRD+K NILLD+ + DFG + LD + V GT ++AP
Sbjct: 138 CALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 192
Query: 470 EYLSTGQSS------EKTDVFGFGILLLELISG 496
E + + ++ D++ G+++ L++G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV ++ L H N+++L F LV G + + + + I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRG 462
G+ YLH+ I+HRD+K N+LL+ + + DFGL+ + + + G
Sbjct: 146 LSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERLG 200
Query: 463 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
T +IAPE L + EK DV+ G++L L++G
Sbjct: 201 TAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 93
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 154 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 208
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 358 LLRLIGFCMTTTER--------LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ +L Y + VA +AK +L K R
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 169 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 223
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG VYK ++ +A ++ + + + E+E+++ H +++L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 367 TTTERLLVYPYMSNGSVAS------RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
+ ++ + G+V + R +P + R+ + L +LH + +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 138
Query: 421 IHRDVKAANILLDEYYEAVVGDFGLA----KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
IHRD+KA N+L+ + + DFG++ K L DS + T + E +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 477 SSEKTDVFGFGILLLEL 493
K D++ GI L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 358 LLRLIGFCMTTTER--------LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ +L Y + VA +AK +L K R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 82
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 143 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 197
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 147 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 201
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 147 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 201
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 75
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 136 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 190
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
+ ARG+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520
R + +APE + S K+DV+ +G+LL E+ S + G ++ D+ ++
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE-----DFCSRLR 316
Query: 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 575
+ ++ E+ Q+ L C P RP+ +E+V L GD L
Sbjct: 317 E----------GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL-GDLL 360
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ E+ ++ H N+++L LV + G + ++ + D I
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI 151
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTT 458
G+ YLH+ I+HRD+K NILL+ + + DFGL+ D +
Sbjct: 152 MKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-DYKLRD 207
Query: 459 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518
+ GT +IAPE L + +EK DV+ G+++ L+ G FG +Q D +KK
Sbjct: 208 RL-GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP--FGGQNDQ-----DIIKK 258
Query: 519 IHQEK 523
+ + K
Sbjct: 259 VEKGK 263
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 130 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCG 206
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 87
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 148 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 202
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 78
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 139 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 193
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 10/219 (4%)
Query: 283 LGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEI 341
+G F + N+ K +GKG F V + + G A K + +
Sbjct: 13 MGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF 72
Query: 342 Q-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKR 400
Q + E + H N++RL + LV+ ++ G + + A+ A
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 401 IALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVT 457
+ Y H I+HR++K N+LL + + DFGLA ++ DS
Sbjct: 133 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAW 187
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT G+++PE L S+ D++ G++L L+ G
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 358 LLRLIGFCMTTTER--------LLVYPYMSNGSVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ +L Y + VA +AK +L K R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 189
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV--TTAVRGTVGHIAPEYLSTGQS 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 478 SEKTDVFGFGILLLELISG 496
++DV+ G +L E+++G
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCG 201
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV--TTAVRGTVGHIAPEYLSTGQS 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 478 SEKTDVFGFGILLLELISG 496
++DV+ G +L E+++G
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCG 201
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 10/204 (4%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 355
+ N+ K +GKG F V + + G A K + + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N++RL + LV+ ++ G + + A+ A + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 125 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 473 STGQSSEKTDVFGFGILLLELISG 496
S+ D++ G++L L+ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV--TTAVRGTVGHIAPEYLSTGQS 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 478 SEKTDVFGFGILLLELISG 496
++DV+ G +L E+++G
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGN----AIGGEIQFQTEV 347
+++S + + +G+G F VYK ++ +VA+K++K G+ G E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 348 EMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAAR 407
+++ H N++ L+ + LV+ +M L + K L +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
GL YLH+ I+HRD+K N+LLDE + DFGLAK + V T +
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYR 179
Query: 468 APEYLSTGQ-SSEKTDVFGFGILLLELI 494
APE L + D++ G +L EL+
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 10/204 (4%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 355
+ N+ K +GKG F V + + G A K + + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N++RL + LV+ ++ G + + A+ A + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 125 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 473 STGQSSEKTDVFGFGILLLELISG 496
S+ D++ G++L L+ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 102
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 163 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 217
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 128 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCG 204
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNL 358
F ++G+GGFG V+ ++ G + A K+L + VE LA VH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 359 LRLIGFCM-TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARGLLYLH 413
+ + + T T+ LV M+ G + + + P GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
++ II+RD+K N+LLD+ + D GLA L + T GT G +APE L
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ D F G+ L E+I+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV--TTAVRGTVGHIAPEYLSTGQS 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 478 SEKTDVFGFGILLLELISG 496
++DV+ G +L E+++G
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 79
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 140 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 194
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCG 201
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCG 201
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 112
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 173 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 227
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 169 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 223
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F L+GKG FG V + G A+K L+ I + T E L R+
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCG 201
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 10/204 (4%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 355
+ N+ K +GKG F V + + G A K + + Q + E + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N++RL + LV+ ++ G + + A+ A + Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 416 CDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 124 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 473 STGQSSEKTDVFGFGILLLELISG 496
S+ D++ G++L L+ G
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVG 202
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNL 358
F ++G+GGFG V+ ++ G + A K+L + VE LA VH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 359 LRLIGFCM-TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARGLLYLH 413
+ + + T T+ LV M+ G + + + P GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
++ II+RD+K N+LLD+ + D GLA L + T GT G +APE L
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ D F G+ L E+I+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNL 358
F ++G+GGFG V+ ++ G + A K+L + VE LA VH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 359 LRLIGFCM-TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARGLLYLH 413
+ + + T T+ LV M+ G + + + P GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
++ II+RD+K N+LLD+ + D GLA L + T GT G +APE L
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ D F G+ L E+I+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNL 358
F ++G+GGFG V+ ++ G + A K+L + VE LA VH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 359 LRLIGFCM-TTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARGLLYLH 413
+ + + T T+ LV M+ G + + + P GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473
++ II+RD+K N+LLD+ + D GLA L + T GT G +APE L
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ D F G+ L E+I+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAA 385
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 110
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 171 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 225
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 357
+++ ++G G FG VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 153
Query: 358 LLRLIGFCMTTTERL------LVYPYMSNG--SVASRL-KAKPSLDWATRKRIALGAARG 408
++RL F ++ E+ LV Y+ VA +AK +L K R
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
L Y+H I HRD+K N+LLD + + DFG AK L + +V+ + +
Sbjct: 214 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 268
Query: 468 APEYL-STGQSSEKTDVFGFGILLLELISG 496
APE + + DV+ G +L EL+ G
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMS----NGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++S + AS L P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIP---LPLIKSYLFQLLQGLA 119
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMS----NGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++S + AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIP---LPLIKSYLFQLLQGLA 120
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 124
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 180
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV--TTAVRGTVGHIAPEYLSTGQS 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 478 SEKTDVFGFGILLLELISG 496
++DV+ G +L E+++G
Sbjct: 214 DARSDVYSLGCVLYEVLTG 232
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 127
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 210
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L K +I + E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 145
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 198
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 343 FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIA 402
F+ E+++I+ + L G E ++Y YM N S+ + LD I
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 403 LGAARGLL--------YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454
+ + ++ Y+H + I HRDVK +NIL+D+ + DFG ++ + D
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM--VDK 205
Query: 455 HVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILL 490
+ + RGT + PE+ S S K D++ GI L
Sbjct: 206 KIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 118
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470
+ H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPE 174
Query: 471 Y-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
L S D++ G + E+++ RAL
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 127
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTR-RAL 210
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIG-----GEIQFQT 345
K+ ++ + + L+GKGGFG V+ G+ L D VA+K + +G +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 346 EVEMI----SLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRK-R 400
EV ++ + H ++RL+ + T +LV + L A+ D+ T K
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV--------LERPLPAQDLFDYITEKGP 135
Query: 401 IALGAAR----GLLYLHEQCDPK-IIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDS 454
+ G +R ++ + C + ++HRD+K NIL+D A + DFG LL H +
Sbjct: 136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEP 194
Query: 455 HVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISG 496
+ T GT + PE++S Q + V+ GILL +++ G
Sbjct: 195 Y--TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 356
+S+F K+L+G+G +G V + G +VA+K+++ + ++ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
N++ + + Y+ + + L S + I + L +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC---DSHVTTAVRGTVGHI------ 467
+IHRD+K +N+L++ + V DFGLA+++D +S T G V +
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 468 APE-YLSTGQSSEKTDVFGFGILLLEL 493
APE L++ + S DV+ G +L EL
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 325 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 239
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV--- 439
+ ++ L AT K + YLHE IIHRD+K N+LL E
Sbjct: 240 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 296
Query: 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISG 496
+ DFG +K+L ++ + + GT ++APE L T + D + G++L +SG
Sbjct: 297 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 200
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 325 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 225
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV--- 439
+ ++ L AT K + YLHE IIHRD+K N+LL E
Sbjct: 226 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 282
Query: 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISG 496
+ DFG +K+L ++ + + GT ++APE L T + D + G++L +SG
Sbjct: 283 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 201
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 201
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 188
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 76 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 187
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 76 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 187
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 138
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATR 191
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 188
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 188
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMS----NGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++S AS L P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 118
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 204
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 61 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 115
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 172
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMS----NGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++S AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 120
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 206
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 200
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 201
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 104 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 215
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 96 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 207
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 173
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 45/238 (18%)
Query: 300 NFSSKNLVGKGGFGN-VYKGYLQDGTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVHR 356
+F K+++G G G VY+G D VAVKR+ + + E+Q E + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDE-----HP 78
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIA-LG---------AA 406
N++R FC T +R Y +A L A ++ +K A LG
Sbjct: 79 NVIRY--FC-TEKDRQFQY-------IAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT 128
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDE-----YYEAVVGDFGLAKLL---DHCDSHVTT 458
GL +LH I+HRD+K NIL+ +A++ DFGL K L H S +
Sbjct: 129 SGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RS 184
Query: 459 AVRGTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELISGLRALEFGKTANQKGAML 513
V GT G IAPE LS T D+F G + +IS + FGK+ ++ +L
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE-GSHPFGKSLQRQANIL 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 200
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 173
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 104 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 215
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLSFCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 201
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 200
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 173
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 135
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 188
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 144
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATR 197
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 61 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 172
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 138
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 191
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 356
+S+F K+L+G+G +G V + G +VA+K+++ + ++ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
N++ + + Y+ + + L S + I + L +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC---DSHVTTAVRGTVGHI------ 467
+IHRD+K +N+L++ + V DFGLA+++D +S T G ++
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 468 APE-YLSTGQSSEKTDVFGFGILLLELI 494
APE L++ + S DV+ G +L EL
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 132
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 133 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 185
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V YM G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 138
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 191
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 140
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 193
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
KE + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRI 401
+ LL+ + + RLL + + V + +P D A ++ +
Sbjct: 109 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 402 ALGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTA 459
A +L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTD 220
Query: 460 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 135
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 188
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V YM G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + +G G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 138
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATR 191
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 129
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 182
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 135
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 188
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 139
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATR 192
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 111 IPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQL 169
IP+ + L L L + N GPIP ++ L L YL + + +++GAIP LS + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 170 AFLDLSYNNLSGPVPSFHAKTFNITGNSLIC--ATGAEEDCFGT 211
LD SYN LSG +P + N+ G + +GA D +G+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 81 QNLSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS 140
NL G + +I +SG IP + ++ L+TLD S N +G +P ++S
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 141 HLETLQYLRLNNNSLTGAIPPSLSNMSQL-AFLDLSYNNLSGPVPSFHAK 189
L L + + N ++GAIP S + S+L + +S N L+G +P A
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 66/181 (36%), Gaps = 55/181 (30%)
Query: 83 LSGTLSSSIGXXXXXXXXXXXXXXISGHIPTEIGKLSKLLT-LDLSNNFFTGPIPSTVSH 141
LSGTL SI ISG IP G SKL T + +S N TG IP T ++
Sbjct: 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196
Query: 142 L----------------------------------------------ETLQYLRLNNNSL 155
L + L L L NN +
Sbjct: 197 LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI 256
Query: 156 TGAIPPSLSNMSQLAFLDLSYNNLSGPVPS-FHAKTFNITGNSLICATGAEEDCFGTAPM 214
G +P L+ + L L++S+NNL G +P + + F+++ A C +P+
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY-------ANNKCLCGSPL 309
Query: 215 P 215
P
Sbjct: 310 P 310
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 135
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATR 188
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 130
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 183
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 337 IGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSL 393
I ++ T+ E+ +L + H N+++L LV ++ G + R+K K
Sbjct: 44 ISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHF 103
Query: 394 DWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 450
I + ++H D ++HRD+K N+L ++ E + DFG A+L
Sbjct: 104 SETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160
Query: 451 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ + T T+ + APE L+ E D++ G++L ++SG
Sbjct: 161 PDNQPLKTPC-FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 156
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 209
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 145
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 198
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
+ F L+GKG FG V + G A+K LK + + T E L R+
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 270
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+ +++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 271 KN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCG 348
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 144
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 197
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 145
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 198
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 139
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 192
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 130
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 183
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 139
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 192
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 131
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 132 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 184
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 152
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 205
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
+ F L+GKG FG V + G A+K LK + + T E L R+
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+ +++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 268 KN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCG 345
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 129
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 182
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 152
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 205
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 358 LLRLIGFCMTTTERLLVYPY----MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ + + AS L P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 153
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 206
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 307 VGKGGFGNVYKGYLQDG-TVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
+G+G +G V+K ++ +VA+KR++ D + G E+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 365 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
+ + LV+ + LD K +GL + H + ++HRD
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRD 126
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
+K N+L++ E + DFGLA+ +A T+ + P+ L + S D+
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 484 FGFGILLLELISGLRALEFGKTANQK 509
+ G + EL + R L G + +
Sbjct: 186 WSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 139
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 192
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTV-VAVKRL-KDGNAIGGE------IQFQTEVEMISLAVHRNL 358
+G G G V + + VA+K + K AIG + +TE+E++ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDP 418
+++ F + +V M G + ++ L AT K + YLHE
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN--- 133
Query: 419 KIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL--- 472
IIHRD+K N+LL E + DFG +K+L ++ + + GT ++APE L
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSV 191
Query: 473 STGQSSEKTDVFGFGILLLELISG 496
T + D + G++L +SG
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 153
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 206
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
VG G +G+V + + G VAVK+L + +I + E+ ++ H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 365 -----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
+ + + ++ + + +K + D + I RGL Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---D 155
Query: 420 IIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE-YLSTGQSS 478
IIHRD+K +N+ ++E E + DFGLA+ H D +T V T + APE L+ +
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHYN 211
Query: 479 EKTDVFGFGILLLELISG 496
+ D++ G ++ EL++G
Sbjct: 212 QTVDIWSVGCIMAELLTG 229
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 325 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 41 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 99
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV--- 439
+ ++ L AT K + YLHE IIHRD+K N+LL E
Sbjct: 100 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 156
Query: 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISG 496
+ DFG +K+L ++ + + GT ++APE L T + D + G++L +SG
Sbjct: 157 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 325 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 100
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV--- 439
+ ++ L AT K + YLHE IIHRD+K N+LL E
Sbjct: 101 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157
Query: 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISG 496
+ DFG +K+L ++ + + GT ++APE L T + D + G++L +SG
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 131/308 (42%), Gaps = 57/308 (18%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMIS 351
QS + S+ ++G G G V ++G Q G VAVKR L D I EI+ TE +
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD--- 66
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKR-----IAL-- 403
H N++R +C TT+R L + N ++ +++K D + + I+L
Sbjct: 67 --DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLD-------------EYYEAVVGDFGLAKLLD 450
A G+ +LH KIIHRD+K NIL+ E ++ DFGL K LD
Sbjct: 123 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 451 HCDSHVTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLELISGLRAL 500
S T + GT G APE L + + D+F G + ++S +
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH- 238
Query: 501 EFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR 560
FG +++ ++ + + + K L +DR + E + + P R
Sbjct: 239 PFGDKYSRESNIIRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKR 287
Query: 561 PKMSEVVR 568
P +V+R
Sbjct: 288 PTAMKVLR 295
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 325 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 48 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 106
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV--- 439
+ ++ L AT K + YLHE IIHRD+K N+LL E
Sbjct: 107 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 163
Query: 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISG 496
+ DFG +K+L ++ + + GT ++APE L T + D + G++L +SG
Sbjct: 164 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 298 TSNFSSKNLVGKGGFGNVYKG-YLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 356
+S+F K+L+G+G +G V + G +VA+K+++ + ++ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
N++ + + Y+ + + L S + I + L +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC---DSHVT------TAVRGTVGHI 467
+IHRD+K +N+L++ + V DFGLA+++D +S T T T +
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 468 APE-YLSTGQSSEKTDVFGFGILLLEL 493
APE L++ + S DV+ G +L EL
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 325 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 100
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV--- 439
+ ++ L AT K + YLHE IIHRD+K N+LL E
Sbjct: 101 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157
Query: 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISG 496
+ DFG +K+L ++ + + GT ++APE L T + D + G++L +SG
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLIGFCMTTTERLLVYPYM----SNGSVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ + AS L P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIP---LPLIKSYLFQLLQGLA 117
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 119
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 121
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 119
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 117
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 117
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 117
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 118
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 120
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 117
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
+ F L+GKG FG V + G A+K LK + + T E L R+
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+ +++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 128 KN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCG 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V ++ G +VAVK++ E+ F EV ++ H N++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 218 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 273
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + V GT +APE +S + D++
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 332
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 333 LGIMVIEMVDG 343
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 120
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 119
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIP---LPLIKSYLFQLLQGLA 120
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
+ F L+GKG FG V + G A+K LK + + T E L R+
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+ +++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 130 KN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCG 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEY- 471
+++HRD+K N+L++ + DFGLA+ ++ V T+ + APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 174
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRAL 500
L S D++ G + E+++ RAL
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTR-RAL 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 121
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEY- 471
+++HRD+K N+L++ + DFGLA+ ++ V T+ + APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 176
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRAL 500
L S D++ G + E+++ RAL
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTR-RAL 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAPEY- 471
+++HRD+K N+L++ + DFGLA+ ++ V T+ + APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 174
Query: 472 LSTGQSSEKTDVFGFGILLLELISGLRAL 500
L S D++ G + E+++ RAL
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTR-RAL 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 118
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 204
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
+ F L+GKG FG V + G A+K LK + + T E L R+
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 358 -LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + T +RL V Y + G + L + + L YLH +
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+ +++RD+K N++LD+ + DFGL K D GT ++APE L
Sbjct: 129 KN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 476 QSSEKTDVFGFGILLLELISG 496
D +G G+++ E++ G
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCG 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + D+GLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K D + I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI-YQ 129
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D +T V T
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATR 182
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 14/203 (6%)
Query: 305 NLVGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
++GKG F V + G +V V + + E + E + + H ++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 88
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-D 417
+ L+ + +V+ +M + + + + + +A R +L C D
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 418 PKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCDSHVTTAVR-GTVGHIAPEYLS 473
IIHRDVK N+LL + +GDFG+A L +S + R GT +APE +
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVK 206
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ DV+G G++L L+SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K++ D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGL + H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 35/277 (12%)
Query: 307 VGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+G+G F ++KG ++ T V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCD 417
+ G C E +LV ++ GS+ + LK K ++ + +A A + +L E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENT- 133
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA---VRGTVGHIAPEYLST 474
+IH +V A NILL + G+ KL D S ++ + + PE +
Sbjct: 134 --LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 475 GQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533
++ + TD + FG L E+ SG ++ + LD ++KL+ D+
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSG---------GDKPLSALD------SQRKLQFYEDRHQ 236
Query: 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
EL ++ C Y P RP ++R L
Sbjct: 237 LPAPKAAELANLINN---CMDYEPDHRPSFRAIIRDL 270
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRL-----KDGNAIGGEIQFQTEVEMISLAVH 355
F K +G G FG+V+ L + ++R+ KD + + E Q + E+E++ H
Sbjct: 24 FIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLKSLDH 79
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLY 411
N++++ +V G + R+ + +L + L Y
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 412 LHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
H Q ++H+D+K NIL + + + DFGLA+L D H T A GT ++A
Sbjct: 140 FHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAA-GTALYMA 194
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELISG 496
PE + K D++ G+++ L++G
Sbjct: 195 PEVFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V ++ G +VAVK++ E+ F EV ++ H N++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 96 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 151
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + V GT +APE +S + D++
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 210
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 211 LGIMVIEMVDG 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V ++ G +VAVK++ E+ F EV ++ H N++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 98 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 153
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + V GT +APE +S + D++
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 212
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 213 LGIMVIEMVDG 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+ +++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 357
NF +G+G +G VYK + G VVA+ +++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 358 LLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
+++L+ T + LV+ ++ AS L P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLAFCH 119
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-L 472
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 473 STGQSSEKTDVFGFGILLLELISGLRAL 500
S D++ G + E+++ RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTR-RAL 202
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 307 VGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+G+G F ++KG ++ T V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCD 417
+ G C+ E +LV ++ GS+ + LK K ++ + +A A + +L E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT- 133
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA---VRGTVGHIAPEYLST 474
+IH +V A NILL + G+ KL D S ++ + + PE +
Sbjct: 134 --LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 475 GQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533
++ + TD + FG L E+ SG ++ + LD ++KL+ D+
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSG---------GDKPLSALD------SQRKLQFYEDRHQ 236
Query: 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
EL ++ C Y P RP ++R L
Sbjct: 237 LPAPKAAELANLINN---CMDYEPDHRPSFRAIIRDL 270
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 323 GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382
G VAVK++ E+ F EV ++ H N++ + + E +V ++ G+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 442
+ + ++ + L R L YLH Q +IHRD+K+ +ILL + D
Sbjct: 129 LTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSD 184
Query: 443 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
FG + V GT +APE +S + D++ GI+++E+I G
Sbjct: 185 FGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G G FG V++ + V V + + + + E+ +++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 367 TTTERLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
E +L+ ++S G + R+ A+ + A A GL ++HE I+H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDI 175
Query: 426 KAANILLDEYYEAVVG--DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 483
K NI+ + + V DFGLA L+ + T APE + TD+
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLN--PDEIVKVTTATAEFAAPEIVDREPVGFYTDM 233
Query: 484 FGFGILLLELISGL 497
+ G+L L+SGL
Sbjct: 234 WAIGVLGYVLLSGL 247
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 301 FSSKNLVGKGGFGNVY----KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 356
+SK L G+G F V K Q+ +K+ + G EI + V ++ + R
Sbjct: 32 LTSKEL-GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR 90
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRK----RIALGAARGLLYL 412
++ L T+E +L+ Y + G + S P L + R+ G+ YL
Sbjct: 91 -VINLHEVYENTSEIILILEYAAGGEIFSL--CLPELAEMVSENDVIRLIKQILEGVYYL 147
Query: 413 HEQCDPKIIHRDVKAANILLDEYY---EAVVGDFGLAKLLDH-CDSHVTTAVRGTVGHIA 468
H+ I+H D+K NILL Y + + DFG+++ + H C+ + GT ++A
Sbjct: 148 HQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLA 201
Query: 469 PEYLSTGQSSEKTDVFGFGILLLELIS 495
PE L+ + TD++ GI+ L++
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V ++ G +VAVK++ E+ F EV ++ H N++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 141 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 196
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + V GT +APE +S + D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 255
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 256 LGIMVIEMVDG 266
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVH 355
+ S VG G +G+V + G VA+K+L EI + E+ ++ H
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQH 82
Query: 356 RNLLRLIG-FCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYL 412
N++ L+ F ++ R Y+ + + L+ L ++ K + +GL Y+
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 413 HEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY- 471
H ++HRD+K N+ ++E E + DFGLA+ H D+ +T V T + APE
Sbjct: 143 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWYRAPEVI 195
Query: 472 LSTGQSSEKTDVFGFGILLLELISG 496
LS ++ D++ G ++ E+++G
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 354
+ NF +G+G +G VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 355 HRNLLRLIGFCMTTTERLLVYPYMSNG----SVASRLKAKPSLDWATRKRIALGAARGLL 410
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIP---LPLIKSYLFQLLQGLA 120
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-HCDSHVTTAVRGTVGHIAP 469
+ H +++HRD+K N+L++ + DFGLA+ ++ V T+ + AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 470 EY-LSTGQSSEKTDVFGFGILLLELISGLRAL 500
E L S D++ G + E+++ RAL
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTR-RAL 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V ++ G +VAVK++ E+ F EV ++ H N++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 87 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 142
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + V GT +APE +S + D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 201
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 202 LGIMVIEMVDG 212
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 300 NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVH 355
+ S VG G +G+V + G VA+K+L EI + E+ ++ H
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQH 100
Query: 356 RNLLRLIG-FCMTTTER-----LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAAR 407
N++ L+ F ++ R LV P+M + L+ ++++ K + +
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-----TDLQKIMGMEFSEEKIQYLVYQMLK 155
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
GL Y+H ++HRD+K N+ ++E E + DFGLA+ H D+ +T V T +
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYR 208
Query: 468 APEY-LSTGQSSEKTDVFGFGILLLELISG 496
APE LS ++ D++ G ++ E+++G
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKK 518
R + +APE + + ++DV+ FG+LL E+ S G + G +D + ++
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRR 315
Query: 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ + ++ +Y EM Q L C PS RP SE+V L
Sbjct: 316 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V ++ G +VAVK++ E+ F EV ++ H N++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 91 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 146
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + V GT +APE +S + D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 205
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 206 LGIMVIEMVDG 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 153
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D + V T
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXV-ATR 206
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 400 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 459
+IA+ + L +LH + +IHRDVK +N+L++ + + DFG++ L DS T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI 212
Query: 460 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 493
G ++APE L+ S K+D++ GI ++EL
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKK 518
R + +APE + + ++DV+ FG+LL E+ S G + G +D + ++
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRR 308
Query: 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ + ++ +Y EM Q L C PS RP SE+V L
Sbjct: 309 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKK 518
R + +APE + + ++DV+ FG+LL E+ S G + G +D + ++
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRR 313
Query: 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ + ++ +Y EM Q L C PS RP SE+V L
Sbjct: 314 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMI 350
E + S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 351 SLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRIA 402
+ LL+ + + RLL + + V + +P D A ++ +A
Sbjct: 61 VV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 115
Query: 403 LGAARGLLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAV 460
+L C + ++HRD+K NIL+D E + DFG LL V T
Sbjct: 116 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDF 172
Query: 461 RGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 173 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA-V 460
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 461 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--WVKK 518
R + +APE + + ++DV+ FG+LL E+ S G + G +D + ++
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASP-YPGVKIDEEFCRR 306
Query: 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570
+ + ++ +Y EM Q L C PS RP SE+V L
Sbjct: 307 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 17/210 (8%)
Query: 296 SATSNFSSKNLVGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEM 349
S T + +GKG F V + G+ ++ K+L + + + E +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD----HQKLEREARI 56
Query: 350 ISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGL 409
L H N++RL LV+ ++ G + + A+ A +
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 116
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGH 466
L+ H+ ++HRD+K N+LL + + DFGLA + D GT G+
Sbjct: 117 LHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
++PE L + D++ G++L L+ G
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 156
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D + V T
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYV-ATR 209
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D + V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 129
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D + V T
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATR 182
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H D + V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHR 356
S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---- 59
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRIALGAARG 408
LL+ + + RLL + + V + +P D A ++ +A
Sbjct: 60 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 409 LLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+L C + ++HRD+K NIL+D E + DFG LL V T GT +
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 175
Query: 467 IAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
PE++ + ++ V+ GILL +++ G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 96/268 (35%), Gaps = 75/268 (27%)
Query: 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 357
++F +G+GGFG V++ + D A+KR++ N + EV+ ++ H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 358 LLRLIGFCMTTTERLL---------------------------------VYPYMSNGSVA 384
++R + T + P+ + +V
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 385 SRLKAKPSL---------------DWATRK------------RIALGAARGLLYLHEQCD 417
+ P + DW R+ I + A + +LH +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-- 183
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAV--------RGTVG---H 466
++HRD+K +NI VGDFGL +D + T G VG +
Sbjct: 184 -GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLY 242
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELI 494
++PE + S K D+F G++L EL+
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + EI+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+++D+ V DFGLAK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + EI+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+++D+ V DFGLAK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 31 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 90
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 151 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 208 FAKRVKGA----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHR 356
S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---- 59
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRIALGAARG 408
LL+ + + RLL + + V + +P D A ++ +A
Sbjct: 60 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 409 LLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+L C + ++HRD+K NIL+D E + DFG LL V T GT +
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 175
Query: 467 IAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
PE++ + ++ V+ GILL +++ G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 295 QSATSNF---SSKNLVGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQT 345
Q A ++F S ++G G FG V+K G ++ + +KD + EI
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL-- 403
+++ H NL++L + + +LV Y+ G + R+ S + I
Sbjct: 142 QLD------HANLIQLYDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELDTILFMK 194
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILL--DEYYEAVVGDFGLAKLLDHCDSHVTTAVR 461
G+ ++H+ I+H D+K NIL + + + DFGLA+ +
Sbjct: 195 QICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARR--YKPREKLKVNF 249
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGL 497
GT +APE ++ S TD++ G++ L+SGL
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 299 SNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHR 356
S + L+G GGFG+VY G + D VA+K + KD + GE+ T V M +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV---- 59
Query: 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDW--------ATRKRIALGAARG 408
LL+ + + RLL + + V + +P D A ++ +A
Sbjct: 60 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 409 LLYLHEQC-DPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
+L C + ++HRD+K NIL+D E + DFG LL V T GT +
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 175
Query: 467 IAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
PE++ + ++ V+ GILL +++ G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y++ G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V + + G A+K L + +I+ + I AV+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y++ G + S L+ + A YLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+DE V DFG AK + T + GT ++APE + +
Sbjct: 148 ---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 200
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 201 GYNKAVDWWALGVLIYEMAAG 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query: 291 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEM 349
FK+L NF +K + + G ++KG Q + VV V +++D + F E
Sbjct: 9 FKQL-----NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR-DFNEECPR 60
Query: 350 ISLAVHRNLLRLIGFCMT--TTERLLVYPYMSNGSVASRLKAKPS--LDWATRKRIALGA 405
+ + H N+L ++G C + L+ +M GS+ + L + +D + + AL
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVG 465
ARG+ +LH +P I + + ++++DE A + + D S +
Sbjct: 121 ARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPA 173
Query: 466 HIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512
+APE L + D++ F +LL EL++ R + F +N + M
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGM 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 380 NGSVASRLKAKPSLDWATRKRIALGAAR----GLLYLHEQCDPKIIHRDVKAANILL--D 433
NGS+ + SLD+ R+++ R L YLH Q I HRD+K N L +
Sbjct: 151 NGSIHG---FRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTN 204
Query: 434 EYYEAVVGDFGLAK---LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS--EKTDVFGFGI 488
+ +E + DFGL+K L++ + + T GT +APE L+T S K D + G+
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 489 LLLELISG 496
LL L+ G
Sbjct: 265 LLHLLLMG 272
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + FGLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DF LA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKGY 216
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 147 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSK 199
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 200 GYNKAVDWWALGVLIYEMAAG 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ +S N F +G G FG V + + G A
Sbjct: 12 EQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYA 71
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y G + S
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS 131
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 132 HLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGF 188
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 189 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 140
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H +T V T
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATR 193
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 216
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 148 --NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 307 VGKGGFGNVYKGYLQDG-TVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
+G+G +G V+K ++ +VA+KR++ D + G E+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 365 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
+ + LV+ + LD K +GL + H + ++HRD
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRD 126
Query: 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 483
+K N+L++ E + +FGLA+ +A T+ + P+ L + S D+
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 484 FGFGILLLELISGLRALEFGKTANQK 509
+ G + EL + R L G + +
Sbjct: 186 WSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 140
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H +T V T
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATR 193
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 140
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + DFGLA+ H +T V T
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATR 193
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + D GLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 307 VGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNLLRLI 362
VG G +G V + G VA+K+L E+ + E+ ++ H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLY--RPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 363 GFCMTTTERL-------LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
T E L LV P+M G+ +L L + + +GL Y+H
Sbjct: 91 D-VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY-LST 474
IIHRD+K N+ ++E E + DFGLA+ DS + V T + APE L+
Sbjct: 148 G---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXV-VTRWYRAPEVILNW 200
Query: 475 GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 519
+ ++ D++ G ++ E+I+ GKT + LD +K+I
Sbjct: 201 MRYTQTVDIWSVGCIMAEMIT-------GKTLFKGSDHLDQLKEI 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 214
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G G V + G VAVK + E+ F EV ++ H N++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+ E ++ ++ G++ + ++ L+ + + L YLH Q +IHRD+
Sbjct: 112 LVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167
Query: 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 485
K+ +ILL + DFG + D + GT +APE +S + + D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 486 FGILLLELISG 496
GI+++E++ G
Sbjct: 227 LGIMVIEMVDG 237
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-----HVTTAVR 461
RGL Y+H ++IHRD+K +N+L++E E +GDFG+A+ L C S + T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL--CTSPAEHQYFMTEYV 224
Query: 462 GTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELIS 495
T + APE LS + ++ D++ G + E+++
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + D GLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMIS 351
QS + S+ ++G G G V ++G Q G VAVKR L D I EI+ TE +
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD--- 84
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKR-----IAL-- 403
H N++R +C TT+R L + N ++ +++K D + + I+L
Sbjct: 85 --DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLD-------------EYYEAVVGDFGLAKLLD 450
A G+ +LH KIIHRD+K NIL+ E ++ DFGL K LD
Sbjct: 141 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 451 HCDSHVTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELISGLRALEFGK 504
+ GT G APE L T D+F G + ++S + FG
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGD 256
Query: 505 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 564
+++ ++ + + + K L +DR + E + + P RP
Sbjct: 257 KYSRESNIIRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 565 EVVR 568
+V+R
Sbjct: 306 KVLR 309
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 11 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 70
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ ++ + N F +G G FG V + + G A
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y++ G + S
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ ++ + N F +G G FG V + + G A
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y++ G + S
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 39/298 (13%)
Query: 287 KRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQT 345
+ +F+ + +S +G GG V++ + + A+K + A + ++
Sbjct: 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRN 75
Query: 346 EVEMIS-LAVHRN-LLRLIGFCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRI 401
E+ ++ L H + ++RL + +T +Y M G++ S LK K S+D RK
Sbjct: 76 EIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSY 132
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAV 460
+ +H+ I+H D+K AN L+ + ++ DFG+A ++ S V +
Sbjct: 133 WKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQ 188
Query: 461 RGTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELISGLRALEFGKTANQK 509
GTV ++ PE + SS + DV+ G +L + +GKT Q
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ- 240
Query: 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ I+Q KL ++D + + + I +++ V C + P R + E++
Sbjct: 241 -------QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMIS 351
QS + S+ ++G G G V ++G Q G VAVKR L D I EI+ TE +
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD--- 84
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKR-----IAL-- 403
H N++R +C TT+R L + N ++ +++K D + + I+L
Sbjct: 85 --DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLD-------------EYYEAVVGDFGLAKLLD 450
A G+ +LH KIIHRD+K NIL+ E ++ DFGL K LD
Sbjct: 141 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 451 HCDSHVTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELISGLRALEFGK 504
+ GT G APE L T D+F G + ++S + FG
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGD 256
Query: 505 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 564
+++ ++ + + + K L +DR + E + + P RP
Sbjct: 257 KYSRESNIIRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 565 EVVR 568
+V+R
Sbjct: 306 KVLR 309
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ +S N F +G G FG V + + G
Sbjct: 11 SEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHY 70
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y+ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ ++ + N F +G G FG V + + G A
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y++ G + S
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 HLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 144 --NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ +S N F +G G FG V + + G
Sbjct: 11 SEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHY 70
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y+ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 31 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 90
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 151 SHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 208 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 465 GHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
+ APE + + K+ D++ G +L E++S
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 349
K + + + + VG G +G+V + + G VAVK+L + +I + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 350 ISLAVHRNLLRLIGF-----CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
+ H N++ L+ + + + ++ + + +K + D + I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQ 133
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTV 464
RGL Y+H IIHRD+K +N+ ++E E + D GLA+ H D +T V T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYV-ATR 186
Query: 465 GHIAPE-YLSTGQSSEKTDVFGFGILLLELISG 496
+ APE L+ ++ D++ G ++ EL++G
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 145
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 146 --NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSN 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 148 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ +S N F +G G FG V + + G A
Sbjct: 12 EQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y+ G + S
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 132 HLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 189 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 144 --NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 145
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 146 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSN 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ +S N F +G G FG V + + G
Sbjct: 31 SEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHY 90
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y+ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 150
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 151 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 208 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 144 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 148 --NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ ++ + N F +G G FG V + + G A
Sbjct: 6 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 65
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y++ G + S
Sbjct: 66 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 125
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 126 HLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 182
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 183 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y G + S L+ + A YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+++D+ V DFG AK + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 216
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 163
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 164 --NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSN 244
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 307 VGKGGFGNVYKGYLQDGTV---VAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
VG G +G+V Y D + VAVK+L + ++ + E+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 363 GFCMTTT------ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
T E LV M G+ + + +L + + RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE-YLSTG 475
IIHRD+K +N+ ++E E + DFGLA+ D +T V T + APE L+
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYV-ATRWYRAPEIMLNWM 204
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D++ G ++ EL+ G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y G + S L+ + A YLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+++D+ V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 214
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 151
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 152 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 144 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 145
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 146 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSN 226
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-----HVTTAVR 461
RGL Y+H ++IHRD+K +N+L++E E +GDFG+A+ L C S + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL--CTSPAEHQYFMTEYV 223
Query: 462 GTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELIS 495
T + APE LS + ++ D++ G + E+++
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 307 VGKGGFG--NVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGF 364
+G G FG + + L +VAVK ++ G AI +Q + + SL H N++R
Sbjct: 28 IGSGNFGVARLMRDKLT-KELVAVKYIERGAAIDENVQREI-INHRSLR-HPNIVRFKEV 84
Query: 365 CMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424
+T T ++ Y S G + R+ + G+ Y H +I HRD
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRD 141
Query: 425 VKAANILLD--EYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK- 480
+K N LLD + DFG +K + H T GT +IAPE L + K
Sbjct: 142 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLRQEYDGKI 198
Query: 481 TDVFGFGILLLELISGLRALE 501
DV+ G+ L ++ G E
Sbjct: 199 ADVWSCGVTLYVMLVGAYPFE 219
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 57/308 (18%)
Query: 295 QSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMIS 351
QS + S+ ++G G G V ++G Q G VAVKR L D I EI+ TE +
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD--- 66
Query: 352 LAVHRNLLRLIGFCMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKR-----IAL-- 403
H N++R +C TT+R L + N ++ +++K D + + I+L
Sbjct: 67 --DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANILLD-------------EYYEAVVGDFGLAKLLD 450
A G+ +LH KIIHRD+K NIL+ E ++ DFGL K LD
Sbjct: 123 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 451 HCDSHVTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLELISGLRAL 500
+ GT G APE L + + D+F G + ++S +
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH- 238
Query: 501 EFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR 560
FG +++ ++ + + + K L +DR + E + + P R
Sbjct: 239 PFGDKYSRESNIIRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKR 287
Query: 561 PKMSEVVR 568
P +V+R
Sbjct: 288 PTAMKVLR 295
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG V++ + G A K + + E + E++ +S+ H L+ L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 117
Query: 366 MTTTERLLVYPYMSNGSVASRL---KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIH 422
E +++Y +MS G + ++ K S D A +GL ++HE +H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV--EYMRQVCKGLCHMHEN---NYVH 172
Query: 423 RDVKAANILL--DEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSE 479
D+K NI+ E + DFGL LD S VTT GT APE
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 229
Query: 480 KTDVFGFGILLLELISGL 497
TD++ G+L L+SGL
Sbjct: 230 YTDMWSVGVLSYILLSGL 247
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+++D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 141
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 142 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSN 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLIG 363
+G GG V++ + + A+K + A + ++ E+ ++ L H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 364 FCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
+ +T +Y M G++ S LK K S+D RK + +H+ I+
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 177
Query: 422 HRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK 480
H D+K AN L+ + ++ DFG+A ++ S V + GTV ++ PE + SS +
Sbjct: 178 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 481 T-----------DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
DV+ G +L + +GKT Q + I+Q KL ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 281
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
D + + + I +++ V C + P R + E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 141
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 142 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSN 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 148
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 149 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 149
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 150 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 140
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 141 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 148 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 275 EQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVVA 327
EQ + L K K+ ++ + N F +G G FG V + + G A
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 328 VKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVAS 385
+K L + +I+ + I AV+ L + F L +V Y++ G + S
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 386 RLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445
L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 131 HLRRIGRFAEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 AKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y G + S L+ + A YLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+++D+ V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 214
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 163
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 164 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSN 244
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 307 VGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG V++ + G A K + + E + E++ +S+ H L+ L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 223
Query: 366 MTTTERLLVYPYMSNGSVASRL---KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIH 422
E +++Y +MS G + ++ K S D A +GL ++HE +H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV--EYMRQVCKGLCHMHEN---NYVH 278
Query: 423 RDVKAANILL--DEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSE 479
D+K NI+ E + DFGL LD S VTT GT APE
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 335
Query: 480 KTDVFGFGILLLELISGL 497
TD++ G+L L+SGL
Sbjct: 336 YTDMWSVGVLSYILLSGL 353
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNL 358
+ ++L+G G +G+V + Y + + VVA+K+ L+ + + E+ +++ H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 359 LRLIGFCMTTT----ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE 414
++++ + + L V +++ + L K + G+ Y+H
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS 174
Query: 415 QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-------------------- 454
I+HRD+K AN L+++ V DFGLA+ +D+ ++
Sbjct: 175 A---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 455 HVTTAVRGTVGHI------APEYLSTGQS-SEKTDVFGFGILLLELISGLR 498
H R GH+ APE + ++ +E DV+ G + EL++ ++
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 407 RGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTV 464
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 465 GHIAPEYLSTGQSSEKT-DVFGFGILLLELISG 496
+ APE + + K+ D++ G +L E++S
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+++D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+++D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ ++G G FG V++ L + VA+K+ L+D E+Q ++ + H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ------IMRIVKHPNVV 95
Query: 360 RLIGFCMTTTERL------LVYPYMSNGSV-ASR--LKAKPSLDWATRKRIALGAARGLL 410
L F + ++ LV Y+ ASR K K ++ K R L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 411 YLHEQCDPKIIHRDVKAANILLDEYYEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGHIAP 469
Y+H I HRD+K N+LLD + + DFG AK+L + +V+ + + AP
Sbjct: 156 YIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAP 210
Query: 470 EYL-STGQSSEKTDVFGFGILLLELISG 496
E + + D++ G ++ EL+ G
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 39/284 (13%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN- 357
+S +G GG V++ + + A+K + A + ++ E+ ++ L H +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++RL + +T +Y M G++ S LK K S+D RK + +H+
Sbjct: 74 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLST 474
I+H D+K AN L+ + ++ DFG+A ++ S V + GTV ++ PE +
Sbjct: 131 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 475 GQSSEKT-----------DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523
SS + DV+ G +L + +GKT Q + I+Q
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQIS 231
Query: 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
KL ++D + + + I +++ V C + P R + E++
Sbjct: 232 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 24/226 (10%)
Query: 307 VGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+T T +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 141
Query: 426 KAANILLD--EYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT- 481
K N LLD + DFG +K + H T GT +IAPE L + K
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKKEYDGKVA 198
Query: 482 DVFGFGILLLELISGLRALE-------FGKTA----NQKGAMLDWV 516
DV+ G+ L ++ G E F KT N + A+ D+V
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 32/215 (14%)
Query: 304 KNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
+ ++ +GGF VY+ + G A+KRL Q M L+ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 363 GFCM----------TTTERLLVYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGL 409
FC T L+ + G + LK S L T +I R +
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 410 LYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR-------- 461
++H Q P IIHRD+K N+LL + DFG A + H + +A R
Sbjct: 150 QHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 462 ---GTVGHIAPEYL---STGQSSEKTDVFGFGILL 490
T + PE + S EK D++ G +L
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ ++ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 300 NFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRN 357
F +G G FG V + + G A+K L + +I+ + I AV+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 358 LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL- 153
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 154 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 477 SSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 208 YNKAVDWWALGVLIYEMAAG 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 307 VGKGGFGNVYKGYLQDGTV---VAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
VG G +G+V Y D + VAVK+L + ++ + E+ ++ H N++ L+
Sbjct: 28 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 363 GFCMTTT------ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
T E LV M G+ + + +L + + RGL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH--- 140
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE-YLSTG 475
IIHRD+K +N+ ++E E + DFGLA+ D +T V T + APE L+
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYV-ATRWYRAPEIMLNWM 196
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D++ G ++ EL+ G
Sbjct: 197 HYNQTVDIWSVGCIMAELLQG 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
++ +G+G +G V Y T VA+K++ + E++++ H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ +T + Y+ + + L + I RGL Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA- 163
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD--HCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+L++ + + DFGLA++ D H + T T + APE +
Sbjct: 164 --NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 475 GQSSEKT-DVFGFGILLLELIS 495
+ K+ D++ G +L E++S
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLS 243
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLIG 363
+G GG V++ + + A+K + A + ++ E+ ++ L H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 364 FCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
+ +T +Y M G++ S LK K S+D RK + +H+ I+
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 177
Query: 422 HRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK 480
H D+K AN L+ + ++ DFG+A ++ S V + GTV ++ PE + SS +
Sbjct: 178 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 481 T-----------DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
DV+ G +L + +GKT Q + I+Q KL ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 281
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
D + + + I +++ V C + P R + E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V +++ G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + F L +V Y G + S L+ + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+++D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 278 REEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKR------ 330
RE + +K H N+ K+L+G+G +G VY Y ++ VA+K+
Sbjct: 11 RENLYFQGIKNVH------VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE 64
Query: 331 -LKDGNAIGGEIQFQTE------VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSV 383
L D I EI + + L + +LL+ + L + +++ +
Sbjct: 65 DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF--------DELYIVLEIADSDL 116
Query: 384 ASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDF 443
K L K I G ++HE IIHRD+K AN LL++ V DF
Sbjct: 117 KKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDF 173
Query: 444 GLAKLLD-HCDSHVTTAV--------------RGTVGHI------APEYLSTGQSSEKT- 481
GLA+ ++ D+++ + + H+ APE + ++ K+
Sbjct: 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI 233
Query: 482 DVFGFGILLLELISGLRA 499
D++ G + EL++ L++
Sbjct: 234 DIWSTGCIFAELLNMLQS 251
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 307 VGKGGFGNVYKGYLQDGTV---VAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362
VG G +G+V Y D + VAVK+L + ++ + E+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 363 GFCMTTT------ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
T E LV M G+ + + +L + + RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH--- 148
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE-YLSTG 475
IIHRD+K +N+ ++E E + DFGLA+ D +T V T + APE L+
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYV-ATRWYRAPEIMLNWM 204
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D++ G ++ EL+ G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLIG 363
+G GG V++ + + A+K + A + ++ E+ ++ L H + ++RL
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 364 FCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
+ +T +Y M G++ S LK K S+D RK + +H+ I+
Sbjct: 77 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 130
Query: 422 HRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK 480
H D+K AN L+ + ++ DFG+A ++ S V + GTV ++ PE + SS +
Sbjct: 131 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 189
Query: 481 T-----------DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
DV+ G +L + +GKT Q + I+Q KL ++
Sbjct: 190 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 234
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
D + + + I +++ V C + P R + E++
Sbjct: 235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 300 NFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRN 357
F +G G FG V + + G A+K L + +I+ + I AV+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 358 LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
L + F L +V Y+ G + S L+ + A YLH
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL- 153
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 154 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 477 SSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 208 YNKAVDWWALGVLIYEMAAG 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT +APE + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 39/284 (13%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN- 357
+S +G GG V++ + + A+K + A + ++ E+ ++ L H +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 358 LLRLIGFCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
++RL + +T +Y M G++ S LK K S+D RK + +H+
Sbjct: 70 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLST 474
I+H D+K AN L+ + ++ DFG+A ++ S V + GTV ++ PE +
Sbjct: 127 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 475 GQSSEKT-----------DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523
SS + DV+ G +L + +GKT Q + I+Q
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQIS 227
Query: 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
KL ++D + + + I +++ V C + P R + E++
Sbjct: 228 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 126/298 (42%), Gaps = 39/298 (13%)
Query: 287 KRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQT 345
+ +F+ + +S +G GG V++ + + A+K + A + ++
Sbjct: 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRN 75
Query: 346 EVEMIS-LAVHRN-LLRLIGFCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRI 401
E+ ++ L H + ++RL + +T +Y M G++ S LK K S+D RK
Sbjct: 76 EIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSY 132
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR 461
+ +H+ I+H D+K AN L+ + ++ DFG+A + V +
Sbjct: 133 WKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQ 188
Query: 462 -GTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELISGLRALEFGKTANQK 509
GTV ++ PE + SS + DV+ G +L + +GKT Q
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ- 240
Query: 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
+ I+Q KL ++D + + + I +++ V C + P R + E++
Sbjct: 241 -------QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 300 NFSSKNLVGKGGFGNVYKGYLQDGTV-VAVKR-------LKDGNAIGGEIQFQTE----- 346
N+ K+L+G+G +G VY Y ++ VA+K+ L D I EI
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 347 -VEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
+ + L + +LL+ + L + +++ + K L K I
Sbjct: 89 IIRLHDLIIPEDLLKF--------DELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450
G ++HE IIHRD+K AN LL++ + DFGLA+ ++
Sbjct: 141 LLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ +S N F +G G FG V + + G
Sbjct: 11 SEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHY 70
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+++D+ V DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++APE + + ++ D + G+L+ E+ +G
Sbjct: 188 FAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 15/202 (7%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNLL 359
++ +N +G+G +G V K +Q GT + K ++ +F+ E+E++ H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
RL T+ LV + G + R+ K + RI + Y H+
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---N 126
Query: 420 IIHRDVKAANILL-----DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 474
+ HRD+K N L D + + DFGLA T GT +++P+ L
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLI--DFGLAARFKPGKMMRTKV--GTPYYVSPQVLE- 181
Query: 475 GQSSEKTDVFGFGILLLELISG 496
G + D + G+++ L+ G
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 15/202 (7%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNLL 359
++ +N +G+G +G V K +Q GT + K ++ +F+ E+E++ H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
RL T+ LV + G + R+ K + RI + Y H+
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---N 143
Query: 420 IIHRDVKAANILL-----DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 474
+ HRD+K N L D + + DFGLA T GT +++P+ L
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLI--DFGLAARFKPGKMMRTKV--GTPYYVSPQVLE- 198
Query: 475 GQSSEKTDVFGFGILLLELISG 496
G + D + G+++ L+ G
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 307 VGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+T T +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM---QVAHRDL 141
Query: 426 KAANILLD--EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-D 482
K N LLD + DFG +K S +AV GT +IAPE L + K D
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSK-ASVLHSQPKSAV-GTPAYIAPEVLLKKEYDGKVAD 199
Query: 483 VFGFGILLLELISGLRALE-------FGKTA----NQKGAMLDWV 516
V+ G+ L ++ G E F KT N + A+ D+V
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G FG V++ Q G AVK+++ E+ E+ + ++ L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAA-RGLLYLHEQCDPKIIHRD 424
+ + GS+ +K + L R LG A GL YLH + +I+H D
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLP-EDRALYYLGQALEGLEYLHSR---RILHGD 210
Query: 425 VKAANILLD-EYYEAVVGDFGLAKLL--DHCDSHVTTA--VRGTVGHIAPEYLSTGQSSE 479
VKA N+LL + A + DFG A L D + T + GT H+APE +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDA 270
Query: 480 KTDVFGFGILLLELISG 496
K DV+ ++L +++G
Sbjct: 271 KVDVWSSCCMMLHMLNG 287
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 43/210 (20%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
VG+G FG V+ R+KD + FQ V+ + L V R + L+
Sbjct: 66 VGRGSFGEVH-------------RMKDK-----QTGFQCAVKKVRLEVFR-VEELVACAG 106
Query: 367 TTTERLL-VY------PY-------MSNGSVASRLKAKPSLDWATRKRIALGAA-RGLLY 411
++ R++ +Y P+ + GS+ +K L R LG A GL Y
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYLGQALEGLEY 165
Query: 412 LHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLL--DHCDSHVTTA--VRGTVGH 466
LH + +I+H DVKA N+LL + A + DFG A L D + T + GT H
Sbjct: 166 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE + K D++ ++L +++G
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV ++ H N+++L F LV G + + + I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVG--DFGLAKLLDHCDSHVTTAVR- 461
G YLH+ I+HRD+K N+LL+ + +A++ DFGL+ H + R
Sbjct: 114 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERL 167
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
GT +IAPE L + EK DV+ G++L L+ G
Sbjct: 168 GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 301 FSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 358
F +G G FG V + + G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 359 LRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
L + + L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 418 PKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGY 215
Query: 478 SEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 300 NFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRN 357
F +G G FG V + + G A+K L + +I+ + I AV+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 358 LLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC 416
L + + L +V Y+ G + S L+ + A YLH
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 477 SSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 10/201 (4%)
Query: 299 SNFSSKNLVGKGGFGNVY-KGYLQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHR 356
F +G G FG V + + G A+K L + +I+ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 357 NLLRLIGFCMTTTERL-LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
L + + L +V Y+ G + S L+ + A YLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 416 CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSK 213
Query: 476 QSSEKTDVFGFGILLLELISG 496
++ D + G+L+ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEV-EMISLAV- 354
T+ F +G G FG+V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 65
Query: 355 --HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARG 408
H +++R L+ Y + GS+A + + A K + L RG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILL 432
L Y+H ++H D+K +NI +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 274 NEQRREEVCLGNLKRFHFKELQSATSN------FSSKNLVGKGGFGNVY-KGYLQDGTVV 326
+EQ + L K K+ ++ + N F +G G FG V + + G
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 327 AVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSVA 384
A+K L + +I+ + I AV+ L + F L +V Y++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 385 SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444
S L+ + A YLH +I+RD+K N+L+D+ V DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
AK + T + GT ++AP + + ++ D + G+L+ E+ +G
Sbjct: 187 FAKRV----KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 43/210 (20%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
VG+G FG V+ R+KD + FQ V+ + L V R + L+
Sbjct: 82 VGRGSFGEVH-------------RMKDK-----QTGFQCAVKKVRLEVFR-VEELVACAG 122
Query: 367 TTTERLL-VY------PY-------MSNGSVASRLKAKPSLDWATRKRIALGAA-RGLLY 411
++ R++ +Y P+ + GS+ +K L R LG A GL Y
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYLGQALEGLEY 181
Query: 412 LHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLL--DHCDSHVTTA--VRGTVGH 466
LH + +I+H DVKA N+LL + A + DFG A L D + T + GT H
Sbjct: 182 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 238
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE + K D++ ++L +++G
Sbjct: 239 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEV-EMISLAV- 354
T+ F +G G FG+V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 63
Query: 355 --HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARG 408
H +++R L+ Y + GS+A + + A K + L RG
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 409 LLYLHEQCDPKIIHRDVKAANILL 432
L Y+H ++H D+K +NI +
Sbjct: 124 LRYIHSMS---LVHMDIKPSNIFI 144
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 346 EVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGA 405
EV ++ H N+++L F LV G + + + I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 406 ARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVG--DFGLAKLLDHCDSHVTTAVR- 461
G YLH+ I+HRD+K N+LL+ + +A++ DFGL+ H + R
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERL 184
Query: 462 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 509
GT +IAPE L + EK DV+ G++L L+ G FG +Q+
Sbjct: 185 GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP--FGGQTDQE 229
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEV-EMISLAV- 354
T+ F +G G FG+V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 65
Query: 355 --HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARG 408
H +++R L+ Y + GS+A + + A K + L RG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 409 LLYLHEQCDPKIIHRDVKAANILL 432
L Y+H ++H D+K +NI +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFI 146
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 307 VGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G+G FG V++ Q G AVK+++ E+ E+ + ++ L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAA-RGLLYLHEQCDPKIIHRD 424
+ + GS+ +K + L R LG A GL YLH + +I+H D
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLP-EDRALYYLGQALEGLEYLHSR---RILHGD 191
Query: 425 VKAANILLD-EYYEAVVGDFGLAKLL--DHCDSHVTTA--VRGTVGHIAPEYLSTGQSSE 479
VKA N+LL + A + DFG A L D + T + GT H+APE +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDA 251
Query: 480 KTDVFGFGILLLELISG 496
K DV+ ++L +++G
Sbjct: 252 KVDVWSSCCMMLHMLNG 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 400 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 459
+IA+ + L +LH + +IHRDVK +N+L++ + + DFG++ L D
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDI 168
Query: 460 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 493
G ++APE L+ S K+D++ GI ++EL
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEV-EMISLAV- 354
T+ F +G G FG+V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 67
Query: 355 --HRNLLRLIGFCMTTTERLLVYPYMSNGSVASRL----KAKPSLDWATRKRIALGAARG 408
H +++R L+ Y + GS+A + + A K + L RG
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 409 LLYLHEQCDPKIIHRDVKAANILL 432
L Y+H ++H D+K +NI +
Sbjct: 128 LRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T + APE +
Sbjct: 148 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 301 FSSKNLVGKGGFGNVYKGYLQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+++ + +G+G +G V Y V VA+K++ + E++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL---GAARGLLYLHEQC 416
+ T + Y+ + + L + I RGL Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 148
Query: 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL--DHCDSHVTTAVRGTVGHIAPEYLST 474
++HRD+K +N+LL+ + + DFGLA++ DH + T + APE +
Sbjct: 149 --NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 475 GQSSEKT-DVFGFGILLLELISG 496
+ K+ D++ G +L E++S
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSN 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAI--GGEIQFQTEVE 348
++L+ ++ ++G+G FG V + V A+K L I F E +
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+++ A +++L +V YM G + + + K A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEV 177
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-----HCDSHVTTAVRGT 463
+L L IHRDVK N+LLD+ + DFG ++ CD+ V GT
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GT 232
Query: 464 VGHIAPEYLST----GQSSEKTDVFGFGILLLELISG 496
+I+PE L + G + D + G+ L E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAI--GGEIQFQTEVE 348
++L+ ++ ++G+G FG V + V A+K L I F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+++ A +++L +V YM G + + + K A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEV 182
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-----HCDSHVTTAVRGT 463
+L L IHRDVK N+LLD+ + DFG ++ CD+ V GT
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GT 237
Query: 464 VGHIAPEYLST----GQSSEKTDVFGFGILLLELISG 496
+I+PE L + G + D + G+ L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 24/226 (10%)
Query: 307 VGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 83
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+T T +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 140
Query: 426 KAANILLD--EYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT- 481
K N LLD + DFG +K + H T GT +IAPE L + K
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKKEYDGKVA 197
Query: 482 DVFGFGILLLELISGLRALE-------FGKTA----NQKGAMLDWV 516
DV+ G+ L ++ G E F KT N + A+ D+V
Sbjct: 198 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 243
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+GKG F V + G ++ K+L + + + E + L H N++R
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD----HQKLEREARICRLLKHPNIVR 85
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L L++ ++ G + + A+ A +L+ H+ +
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GV 142
Query: 421 IHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+HRD+K N+LL + + DFGLA ++ + GT G+++PE L
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 478 SEKTDVFGFGILLLELISG 496
+ D++ G++L L+ G
Sbjct: 202 GKPVDLWACGVILYILLVG 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAI--GGEIQFQTEVE 348
++L+ ++ ++G+G FG V + V A+K L I F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
+++ A +++L +V YM G + + + K A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEV 182
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD-----HCDSHVTTAVRGT 463
+L L IHRDVK N+LLD+ + DFG ++ CD+ V GT
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GT 237
Query: 464 VGHIAPEYLST----GQSSEKTDVFGFGILLLELISG 496
+I+PE L + G + D + G+ L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLIG 363
+G GG V++ + + A+K + A + ++ E+ ++ L H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 364 FCMTTTERLLVYPYMSNGSVA--SRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKII 421
+ +T +Y M G++ S LK K S+D RK + +H+ I+
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 177
Query: 422 HRDVKAANILLDEYYEAVVGDFGLA-KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK 480
H D+K AN L+ + ++ DFG+A ++ S V + G V ++ PE + SS +
Sbjct: 178 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRE 236
Query: 481 T-----------DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529
DV+ G +L + +GKT Q + I+Q KL ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 281
Query: 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567
D + + + I +++ V C + P R + E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 9/204 (4%)
Query: 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGG--EIQFQTEVEMISLAVH 355
T ++ +GKG F V + + T ++ + + + + E + L H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ 415
N++RL LV+ ++ G + + A+ A + ++H+
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 416 CDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL 472
I+HRD+K N+LL + + DFGLA + + GT G+++PE L
Sbjct: 150 ---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVL 205
Query: 473 STGQSSEKTDVFGFGILLLELISG 496
+ D++ G++L L+ G
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVG 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 43/210 (20%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
+G+G FG V+ R+KD + FQ V+ + L V R + L+
Sbjct: 80 LGRGSFGEVH-------------RMKDK-----QTGFQCAVKKVRLEVFR-VEELVACAG 120
Query: 367 TTTERLL-VY------PY-------MSNGSVASRLKAKPSLDWATRKRIALGAA-RGLLY 411
++ R++ +Y P+ + GS+ +K L R LG A GL Y
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYYLGQALEGLEY 179
Query: 412 LHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLL--DHCDSHVTTA--VRGTVGH 466
LH + +I+H DVKA N+LL + A + DFG A L D + T + GT H
Sbjct: 180 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE + K D++ ++L +++G
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 296 SATS--NFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLK----DGNAIGGEIQFQTEVE 348
SATS + +G+G +G VYK VA+KR++ + G I+ EV
Sbjct: 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVS 85
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG 408
++ HRN++ L L++ Y N + + P + K G
Sbjct: 86 LLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 409 LLYLHEQCDPKIIHRDVKAANILL-----DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGT 463
+ + H + + +HRD+K N+LL E +GDFGLA+ T + T
Sbjct: 145 VNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-T 200
Query: 464 VGHIAPEY-LSTGQSSEKTDVFGFGILLLELI 494
+ + PE L + S D++ + E++
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 307 VGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366
VG+G +G+VYK +DG LK G + E+ ++ H N++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 367 TTTER--LLVYPYMSNG-------SVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQC 416
+ +R L++ Y + AS+ KP L K + G+ YLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 417 DPKIIHRDVKAANILL----DEYYEAVVGDFGLAKLLDHCDSHVT--TAVRGTVGHIAPE 470
++HRD+K ANIL+ E + D G A+L + + V T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 471 YLSTGQSSEKT-DVFGFGILLLELIS 495
L + K D++ G + EL++
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 305 NLVGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
++GKG F V + G +V V + + E + E + + H ++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 88
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-D 417
+ L+ + +V+ +M + + + + + +A R +L C D
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 418 PKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCDSHVTTAVR-GTVGHIAPEYLS 473
IIHRDVK +LL + +G FG+A L +S + R GT +APE +
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVK 206
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ DV+G G++L L+SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 305 NLVGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
++GKG F V + G +V V + + E + E + + H ++
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 90
Query: 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-D 417
+ L+ + +V+ +M + + + + + +A R +L C D
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 418 PKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCDSHVTTAVR-GTVGHIAPEYLS 473
IIHRDVK +LL + +G FG+A L +S + R GT +APE +
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVK 208
Query: 474 TGQSSEKTDVFGFGILLLELISG 496
+ DV+G G++L L+SG
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+GKG F V + G ++ K+L + + + E + L H N++R
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD----HQKLEREARICRLLKHPNIVR 74
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L L++ ++ G + + A+ A +L+ H+ +
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GV 131
Query: 421 IHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS 477
+HR++K N+LL + + DFGLA ++ + GT G+++PE L
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 478 SEKTDVFGFGILLLELISG 496
+ D++ G++L L+ G
Sbjct: 191 GKPVDLWACGVILYILLVG 209
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ +H N++ L T+ +L+ +S G + L K SL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV----VGDFGLAKLLDHCDSHVT 457
G+ YLH + KI H D+K NI+L + + + DFGLA ++ D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF 175
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ +H N++ L T+ +L+ +S G + L K SL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV----VGDFGLAKLLDHCDSHVT 457
G+ YLH + KI H D+K NI+L + + + DFGLA ++ D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF 175
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ +H N++ L T+ +L+ +S G + L K SL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV----VGDFGLAKLLDHCDSHVT 457
G+ YLH + KI H D+K NI+L + + + DFGLA ++ D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF 175
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ +H N++ L T+ +L+ +S G + L K SL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV----VGDFGLAKLLDHCDSHVT 457
G+ YLH + KI H D+K NI+L + + + DFGLA ++ D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF 175
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ +H N++ L T+ +L+ +S G + L K SL
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV----VGDFGLAKLLDHCDSHVT 457
G+ YLH + KI H D+K NI+L + + + DFGLA ++ D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF 175
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 346 EVEMI-SLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
EVEM+ HRN+L LI F LV+ M GS+ S + + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQD 119
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLA---KLLDHCDSHVTT 458
A L +LH + I HRD+K NIL + + + DFGL KL C T
Sbjct: 120 VASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 459 AVR---GTVGHIAPEYLSTGQSS-----EKTDVFGFGILLLELISG 496
+ G+ ++APE + ++ D++ G++L L+SG
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 411 YLHEQCDPKIIHRDVKAANIL-LDEYYEA---VVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
YLH Q ++HRD+K +NIL +DE + DFG AK L + + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANF 191
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE L E D++ GILL +++G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 9/206 (4%)
Query: 296 SATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLA 353
S T + +GKG F V + + G A K + + Q + E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
H N++RL LV+ ++ G + + A+ A + + H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470
I+HRD+K N+LL + + DFGLA + D GT G+++PE
Sbjct: 121 LN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 471 YLSTGQSSEKTDVFGFGILLLELISG 496
L + D++ G++L L+ G
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 24/226 (10%)
Query: 307 VGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+T T +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 141
Query: 426 KAANILLD--EYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT- 481
K N LLD + FG +K + H T GT +IAPE L + K
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLKKEYDGKVA 198
Query: 482 DVFGFGILLLELISGLRALE-------FGKTA----NQKGAMLDWV 516
DV+ G+ L ++ G E F KT N + A+ D+V
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 409 LLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIA 468
L +LH Q ++H DVK ANI L +GDFGL L++ + G ++A
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 469 PEYLSTGQSSEKTDVFGFGILLLEL 493
PE L G DVF G+ +LE+
Sbjct: 225 PELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 411 YLHEQCDPKIIHRDVKAANIL-LDEYYEA---VVGDFGLAKLLDHCDSHVTTAVRGTVGH 466
YLH Q ++HRD+K +NIL +DE + DFG AK L + + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANF 191
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE L E D++ GILL +++G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ +H N++ L T+ +L+ +S G + L K SL
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV----VGDFGLAKLLDHCDSHVT 457
G+ YLH + KI H D+K NI+L + + + DFGLA ++ D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEF 175
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 9/206 (4%)
Query: 296 SATSNFSSKNLVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLA 353
S T + +GKG F V + + G A K + + Q + E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH 413
H N++RL LV+ ++ G + + A+ A + + H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 414 EQCDPKIIHRDVKAANILLDEYYEAV---VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470
I+HRD+K N+LL + + DFGLA + D GT G+++PE
Sbjct: 121 LN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 471 YLSTGQSSEKTDVFGFGILLLELISG 496
L + D++ G++L L+ G
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 400 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 459
+IA+ + L +LH + +IHRDVK +N+L++ + DFG++ L D
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDI 195
Query: 460 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 493
G + APE L+ S K+D++ GI +EL
Sbjct: 196 DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 24/226 (10%)
Query: 307 VGKGGFGNV-YKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC 365
+G G FG Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 366 MTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425
+T T +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 141
Query: 426 KAANILLD--EYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKT- 481
K N LLD + FG +K + H T GT +IAPE L + K
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV---GTPAYIAPEVLLKKEYDGKVA 198
Query: 482 DVFGFGILLLELISGLRALE-------FGKTA----NQKGAMLDWV 516
DV+ G+ L ++ G E F KT N + A+ D+V
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 25/213 (11%)
Query: 305 NLVGKGGFGNVYKGYLQDGT-----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+L+G+G +G V K L T V +K+ K GE + E++++ H+N++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARG--------LLY 411
+L+ + E+ +Y M + LD KR + A G L Y
Sbjct: 70 QLVDV-LYNEEKQKMYMVMEYCVCG----MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 412 LHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEY 471
LH Q I+H+D+K N+LL + G+A+ L + T P
Sbjct: 125 LHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 472 LSTGQ---SSEKTDVFGFGILLLELISGLRALE 501
++ G S K D++ G+ L + +GL E
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 33/241 (13%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQDG-TVVAVKRLKDGNAI--GGEIQFQTEVE 348
K+++ +F ++G+G FG V L++ V A+K L + F+ E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 349 MISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVAS-------RLKAKPSLDWATRKRI 401
++ + + L LV Y G + + RL + + + I
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG-LAKLLDHCDSHVTTAV 460
A+ + L Y +HRD+K NIL+D + DFG KL++ + AV
Sbjct: 187 AIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 461 RGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELISGLRAL-------EFGKTANQ 508
GT +I+PE L G+ + D + G+ + E++ G +GK N
Sbjct: 238 -GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 509 K 509
K
Sbjct: 297 K 297
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 298 TSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIG---------GEIQFQTEV 347
+ +S+ + +G G FG V+ ++ V VK +K + G++ E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL--EI 80
Query: 348 EMISLAVHRNLLRLI------GFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
++S H N+++++ GF E+ + S + + + P LD I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEK-----HGSGLDLFAFIDRHPRLDEPLASYI 135
Query: 402 --ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 459
L +A G L L + IIHRD+K NI++ E + + DFG A L+ T
Sbjct: 136 FRQLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC 190
Query: 460 VRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELI 494
GT+ + APE L + +++ G+ L L+
Sbjct: 191 --GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 21/240 (8%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQT------- 345
EL + S ++ + + G +G V G +G VA+KR+ + + G + +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 346 ---EVEMISLAVHRNLLRL----IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATR 398
E+ +++ H N+L L + F +L + + +A + + + +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--ISP 133
Query: 399 KRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTT 458
+ I LL LH + ++HRD+ NILL + + + DF LA+ D D++ T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTH 192
Query: 459 AVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELISGLRALEFGKT-ANQKGAMLDWV 516
V + APE + + K D++ G ++ E+ + +AL G T NQ +++ V
Sbjct: 193 YVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVV 250
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 21/240 (8%)
Query: 293 ELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQT------- 345
EL + S ++ + + G +G V G +G VA+KR+ + + G + +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 346 ---EVEMISLAVHRNLLRL----IGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATR 398
E+ +++ H N+L L + F +L + + +A + + + +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--ISP 133
Query: 399 KRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTT 458
+ I LL LH + ++HRD+ NILL + + + DF LA+ D D++ T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTH 192
Query: 459 AVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELISGLRALEFGKT-ANQKGAMLDWV 516
V + APE + + K D++ G ++ E+ + +AL G T NQ +++ V
Sbjct: 193 YVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVV 250
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 39/228 (17%)
Query: 301 FSSKNLVGKGGFGNVY--KGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 358
F ++ +G+G F +VY LQ G + LK I+ E++ +++A ++
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIA-LKHLIPTSHPIRIAAELQCLTVAGGQDN 81
Query: 359 LRLIGFCMTTTERLLV-YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCD 417
+ + +C + +++ PY+ + S L SL + + L + L +H+
Sbjct: 82 VMGVKYCFRKNDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF-- 136
Query: 418 PKIIHRDVKAANILLDEYYEA-VVGDFGLAK--------LLDHCDSHV------------ 456
I+HRDVK +N L + + + DFGLA+ LL S
Sbjct: 137 -GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSI 195
Query: 457 ------TTAVR-GTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISG 496
A R GT G APE L+ + D++ G++ L L+SG
Sbjct: 196 CLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 134
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 192
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 193 LGLEADMWSIGVITYILLSG 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 134
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 192
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 193 LGLEADMWSIGVITYILLSG 212
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 41/280 (14%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG-GEIQFQTEVEM 349
KE++ +F ++G+G F V + Q G V A+K + + + GE+ E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 350 ISLAVHRNLLRLIGFCMTTTERL-LVYPYMSNGSV-------ASRLKAKPSLDWATRKRI 401
+ + R + + F L LV Y G + R+ A+ + + +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR 461
A+ + L Y +HRD+K NILLD + DFG L D V + V
Sbjct: 174 AIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKL-RADGTVRSLVA 223
Query: 462 -GTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML 513
GT +++PE L G + D + G+ E+ G TA G
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG--- 280
Query: 514 DWVKKIHQEKKLEM-LVDKDLKNNYDRIELEEMVQVALLC 552
K +H ++ L + LVD+ + E + +Q LLC
Sbjct: 281 ---KIVHYKEHLSLPLVDEGVPE-----EARDFIQ-RLLC 311
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 344 QTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL 403
+ EV ++ H N++ L T+ +L+ ++ G + L K SL
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTA 459
G+ YLH +I H D+K NI LLD + DFGLA +D +
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 460 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 344 QTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIAL 403
+ EV ++ H N++ L T+ +L+ ++ G + L K SL
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 404 GAARGLLYLHEQCDPKIIHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTA 459
G+ YLH +I H D+K NI LLD + DFGLA +D +
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 460 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 411 YLHEQCDPKIIHRDVKAANIL-LDEY--YEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGH 466
YLH Q ++HRD+K +NIL +DE E++ + DFG AK L + + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANF 186
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE L D++ G+LL +++G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 307 VGKGGFGNVYK------GYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 360
+G G F V K G + +R K + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 361 LIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420
L T+ +L+ ++ G + L K SL G+ YLH +I
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QI 135
Query: 421 IHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ 476
H D+K NI LLD + DFGLA +D + + GT +APE ++
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIVNYEP 193
Query: 477 SSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 346 EVEMI-SLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALG 404
EVEM+ HRN+L LI F LV+ M GS+ S + + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQD 119
Query: 405 AARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLA---KLLDHCDSHVTT 458
A L +LH + I HRD+K NIL + + + DF L KL C T
Sbjct: 120 VASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 459 AVR---GTVGHIAPEYLSTGQSS-----EKTDVFGFGILLLELISG 496
+ G+ ++APE + ++ D++ G++L L+SG
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 50/233 (21%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 351
KE+Q +F ++G+G FG V AV ++K+ I ++ + EM+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEV-----------AVVKMKNTERIYA-MKILNKWEMLK 114
Query: 352 LAV------HRNLLRLIGFCMTTT----------ERLLVYPYMSNG---SVASRLKAKPS 392
A R++L + G C T LV Y G ++ S+ + K
Sbjct: 115 RAETACFREERDVL-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 173
Query: 393 LDWATRKRIALG----AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448
D A R +G A + LH +HRD+K N+LLD + DFG
Sbjct: 174 EDMA---RFYIGEMVLAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLK 224
Query: 449 LDHCDSHVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELISG 496
++ + ++ GT +I+PE L G+ + D + G+ + E++ G
Sbjct: 225 MNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 50/233 (21%)
Query: 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 351
KE+Q +F ++G+G FG V AV ++K+ I ++ + EM+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEV-----------AVVKMKNTERIYA-MKILNKWEMLK 130
Query: 352 LAV------HRNLLRLIGFCMTTT----------ERLLVYPYMSNG---SVASRLKAKPS 392
A R++L + G C T LV Y G ++ S+ + K
Sbjct: 131 RAETACFREERDVL-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 189
Query: 393 LDWATRKRIALG----AARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448
D A R +G A + LH +HRD+K N+LLD + DFG
Sbjct: 190 EDMA---RFYIGEMVLAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLK 240
Query: 449 LDHCDSHVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELISG 496
++ + ++ GT +I+PE L G+ + D + G+ + E++ G
Sbjct: 241 MNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
G+ +LH IIHRD+K +NI++ + DFGLA+ S + T T +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 468 APEYLSTGQSSEKTDVFGFGILLLELISG 496
APE + E D++ G+++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 307 VGKGGFGNVYKGYLQDGT-------VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 359
+G G F V K Q GT + +RL + + EV ++ H N++
Sbjct: 20 LGSGQFAIVRKCR-QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 360 RLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK 419
L T+ +L+ +S G + L K SL + G+ YLH + +
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---R 135
Query: 420 IIHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG 475
I H D+K NI LLD+ + DFG+A ++ + + GT +APE ++
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYE 193
Query: 476 QSSEKTDVFGFGILLLELISG 496
+ D++ G++ L+SG
Sbjct: 194 PLGLEADMWSIGVITYILLSG 214
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
G+ +LH IIHRD+K +NI++ + DFGLA+ S + T T +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 468 APEYLSTGQSSEKTDVFGFGILLLELISG 496
APE + E D++ G+++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 220 GVIMYILLCG 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 212 GVIMYILLCG 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 151
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 210 GVIMYILLCG 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ H N++ L T+ +L+ +S G + L K SL +
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 134
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVT 457
G+ YLH + +I H D+K NI LLD+ + DFG+A ++ +
Sbjct: 135 LKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-- 189
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 152
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 211 GVIMYILLCG 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 250 GVIMYILLCG 259
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 342 QFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRI 401
+ + EV ++ H N++ L T+ +L+ +S G + L K SL +
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 113
Query: 402 ALGAARGLLYLHEQCDPKIIHRDVKAANI-LLDEYY---EAVVGDFGLAKLLDHCDSHVT 457
G+ YLH + +I H D+K NI LLD+ + DFG+A ++ +
Sbjct: 114 LKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-- 168
Query: 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+ GT +APE ++ + D++ G++ L+SG
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 197
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 198 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 256 GVIMYILLCG 265
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 146
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 205 GVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 204 GVIMYILLCG 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 206 GVIMYILLCG 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 408 GLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHI 467
G+ +LH IIHRD+K +NI++ + DFGLA+ C + + T T +
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYR 192
Query: 468 APEYLSTGQSSEKTDVFGFGILLLELISG 496
APE + + D++ G ++ EL+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 372 LLVYPYMSNGSVASRLKAKPSLDWATRK--RIALGAARGLLYLHEQCDPKIIHRDVKAAN 429
L+V + G + SR++ + + R+ I + YLH I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 430 ILLDEYYEAVV---GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 486
+L + DFG AK +S T T ++APE L + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 487 GILLLELISG 496
G+++ L+ G
Sbjct: 206 GVIMYILLCG 215
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 411 YLHEQCDPKIIHRDVKAANIL-LDEY--YEAV-VGDFGLAKLLDHCDSHVTTAVRGTVGH 466
YLH Q ++HRD+K +NIL +DE E++ + DFG AK L + + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 467 IAPEYLSTGQSSEKTDVFGFGILLLELISG 496
+APE L D++ G+LL ++G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 118 LSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 177
LS L L L++N+ P SHL L+ L LN+N LT L + L LD+S N
Sbjct: 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRN 536
Query: 178 NLSGPVPSFHA--KTFNITGNSLIC 200
L P P +IT N IC
Sbjct: 537 QLLAPNPDVFVSLSVLDITHNKFIC 561
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 422 HRDVKAANILLDEYYEAVVGDFGLAK-LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEK 480
HRDVK NIL+ A + DFG+A D + + V GT+ + APE S ++ +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 481 TDVFGFGILLLELISG 496
D++ +L E ++G
Sbjct: 216 ADIYALTCVLYECLTG 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,971,387
Number of Sequences: 62578
Number of extensions: 666193
Number of successful extensions: 4076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 290
Number of HSP's that attempted gapping in prelim test: 1712
Number of HSP's gapped (non-prelim): 1226
length of query: 621
length of database: 14,973,337
effective HSP length: 105
effective length of query: 516
effective length of database: 8,402,647
effective search space: 4335765852
effective search space used: 4335765852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)