Query 007025
Match_columns 621
No_of_seqs 710 out of 5742
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:12:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 5.9E-55 2E-59 443.9 17.9 253 300-572 27-303 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-54 4.1E-59 439.7 15.3 253 299-572 13-286 (299)
3 4aoj_A High affinity nerve gro 100.0 5.6E-54 1.9E-58 440.8 19.0 253 299-572 41-316 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.1E-53 3.9E-58 432.7 20.7 257 298-572 35-297 (307)
5 4b9d_A Serine/threonine-protei 100.0 4.7E-53 1.6E-57 434.2 15.4 250 299-569 24-277 (350)
6 4ase_A Vascular endothelial gr 100.0 6E-53 2.1E-57 436.6 16.3 265 289-572 54-344 (353)
7 4fih_A Serine/threonine-protei 100.0 5.9E-52 2E-56 425.3 23.1 250 299-569 74-324 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.8E-52 6.1E-57 427.9 18.6 250 299-572 58-313 (336)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.9E-53 1.7E-57 426.9 14.3 248 299-567 32-283 (311)
10 3fpq_A Serine/threonine-protei 100.0 2.2E-52 7.5E-57 420.2 18.0 248 302-569 29-283 (290)
11 3hyh_A Carbon catabolite-derep 100.0 6.4E-52 2.2E-56 413.2 17.5 247 299-569 13-263 (275)
12 3hmm_A TGF-beta receptor type- 100.0 3.5E-51 1.2E-55 416.9 20.1 266 299-572 3-294 (303)
13 4fie_A Serine/threonine-protei 100.0 1.1E-50 3.7E-55 426.1 23.6 250 299-569 151-401 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 5E-52 1.7E-56 419.6 11.6 249 299-569 24-282 (304)
15 3uim_A Brassinosteroid insensi 100.0 5.6E-50 1.9E-54 413.7 22.4 311 277-587 8-323 (326)
16 4g31_A Eukaryotic translation 100.0 6.5E-50 2.2E-54 405.7 16.3 249 299-569 5-280 (299)
17 4b99_A Mitogen-activated prote 100.0 5.2E-48 1.8E-52 406.6 16.4 268 299-570 54-346 (398)
18 4f9c_A Cell division cycle 7-r 100.0 6.4E-47 2.2E-51 394.0 19.9 199 297-504 19-251 (361)
19 2qkw_B Protein kinase; three-h 100.0 1.4E-45 4.9E-50 380.0 23.6 279 289-572 29-312 (321)
20 3v5w_A G-protein coupled recep 100.0 8.6E-46 2.9E-50 405.9 19.8 253 298-571 188-452 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 1.5E-45 5.2E-50 406.4 18.9 251 299-569 157-411 (573)
22 3zgw_A Maternal embryonic leuc 100.0 1.4E-44 4.8E-49 375.5 17.1 252 297-569 8-261 (347)
23 2nru_A Interleukin-1 receptor- 100.0 1.6E-42 5.5E-47 354.7 30.0 280 285-573 11-304 (307)
24 2psq_A Fibroblast growth facto 100.0 7.6E-44 2.6E-48 374.2 20.2 255 298-572 80-361 (370)
25 3p86_A Serine/threonine-protei 100.0 5.3E-44 1.8E-48 366.1 16.8 258 295-573 33-296 (309)
26 3fxz_A Serine/threonine-protei 100.0 3.7E-43 1.3E-47 357.8 22.7 252 298-570 19-271 (297)
27 4euu_A Serine/threonine-protei 100.0 6.7E-43 2.3E-47 359.7 24.8 271 298-576 8-310 (319)
28 3kul_A Ephrin type-A receptor 100.0 1.2E-43 4.2E-48 366.2 18.6 256 298-573 48-311 (325)
29 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-43 5.2E-48 362.9 19.1 256 299-573 10-280 (310)
30 3fe3_A MAP/microtubule affinit 100.0 8.8E-44 3E-48 367.2 17.4 249 298-569 14-265 (328)
31 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.9E-43 9.8E-48 352.9 19.2 255 298-574 7-263 (268)
32 4aw2_A Serine/threonine-protei 100.0 2.3E-43 7.8E-48 377.0 18.9 266 290-571 65-341 (437)
33 3vhe_A Vascular endothelial gr 100.0 7.1E-44 2.4E-48 373.1 14.6 265 289-572 12-352 (359)
34 3tki_A Serine/threonine-protei 100.0 2.1E-43 7.1E-48 364.0 17.7 255 298-570 6-263 (323)
35 2qol_A Ephrin receptor; recept 100.0 1.7E-43 5.9E-48 371.9 17.3 256 298-573 44-307 (373)
36 4hcu_A Tyrosine-protein kinase 100.0 2E-43 6.7E-48 354.4 16.7 253 298-572 9-263 (269)
37 3cbl_A C-FES, proto-oncogene t 100.0 9.3E-44 3.2E-48 374.7 14.6 255 298-572 113-371 (377)
38 4eqm_A Protein kinase; transfe 100.0 5.6E-43 1.9E-47 356.0 19.5 260 298-573 10-273 (294)
39 2yab_A Death-associated protei 100.0 2.2E-42 7.6E-47 361.1 24.4 254 298-570 11-274 (361)
40 2c30_A Serine/threonine-protei 100.0 5.1E-42 1.8E-46 353.4 26.0 263 287-570 23-296 (321)
41 1o6l_A RAC-beta serine/threoni 100.0 7.8E-43 2.7E-47 361.3 19.4 251 299-571 5-263 (337)
42 3soc_A Activin receptor type-2 100.0 2.9E-43 1E-47 362.9 15.9 270 298-572 23-315 (322)
43 2ivs_A Proto-oncogene tyrosine 100.0 8.1E-43 2.8E-47 357.9 18.5 256 297-572 21-308 (314)
44 3gen_A Tyrosine-protein kinase 100.0 4.3E-43 1.5E-47 354.6 16.1 254 297-572 22-277 (283)
45 3niz_A Rhodanese family protei 100.0 7.5E-43 2.6E-47 358.0 18.0 268 297-569 19-301 (311)
46 1mp8_A Focal adhesion kinase 1 100.0 7.9E-43 2.7E-47 352.4 17.3 255 298-573 14-274 (281)
47 3tt0_A Basic fibroblast growth 100.0 1E-42 3.5E-47 367.5 18.7 256 298-573 68-350 (382)
48 1rjb_A FL cytokine receptor; k 100.0 1.2E-42 4.3E-47 361.5 19.0 259 296-573 42-332 (344)
49 3poz_A Epidermal growth factor 100.0 7.5E-43 2.6E-47 360.6 16.7 254 299-573 15-276 (327)
50 2y0a_A Death-associated protei 100.0 1.4E-42 4.8E-47 358.4 18.6 254 298-570 10-273 (326)
51 1luf_A Muscle-specific tyrosin 100.0 8.4E-43 2.9E-47 362.5 16.7 257 297-573 45-333 (343)
52 1t46_A HOMO sapiens V-KIT hard 100.0 1.4E-42 4.9E-47 355.9 18.1 257 297-572 21-304 (313)
53 3v8s_A RHO-associated protein 100.0 7.9E-43 2.7E-47 370.0 16.5 265 292-574 62-335 (410)
54 3o0g_A Cell division protein k 100.0 2.4E-42 8.3E-47 350.9 19.4 265 299-569 2-283 (292)
55 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-42 5.1E-47 356.8 18.0 267 298-569 4-294 (317)
56 4dc2_A Protein kinase C IOTA t 100.0 2.9E-42 1E-46 363.7 20.5 258 298-569 51-319 (396)
57 1ob3_A PFPK5, cell division co 100.0 1.1E-42 3.9E-47 352.6 16.6 263 299-569 2-281 (288)
58 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.4E-43 1.8E-47 364.8 14.5 251 298-570 22-282 (353)
59 3l9p_A Anaplastic lymphoma kin 100.0 4.7E-43 1.6E-47 367.9 14.2 255 298-572 70-342 (367)
60 1qcf_A Haematopoetic cell kina 100.0 6.3E-43 2.2E-47 377.4 15.6 254 297-573 186-442 (454)
61 1opk_A P150, C-ABL, proto-onco 100.0 2E-42 6.7E-47 377.3 19.5 256 298-575 219-478 (495)
62 1tki_A Titin; serine kinase, m 100.0 2.4E-42 8.2E-47 355.7 18.9 252 298-570 4-259 (321)
63 1fot_A TPK1 delta, CAMP-depend 100.0 2.8E-42 9.4E-47 354.5 19.1 247 299-570 6-260 (318)
64 3qd2_B Eukaryotic translation 100.0 3.4E-42 1.2E-46 355.8 19.4 250 298-569 5-326 (332)
65 3q4u_A Activin receptor type-1 100.0 5.2E-42 1.8E-46 349.6 20.5 260 298-572 7-299 (301)
66 2bdw_A Hypothetical protein K1 100.0 3.5E-42 1.2E-46 360.4 19.2 254 297-569 27-285 (362)
67 2zv2_A Calcium/calmodulin-depe 100.0 3.8E-42 1.3E-46 350.5 19.0 250 299-569 13-293 (298)
68 3soa_A Calcium/calmodulin-depe 100.0 4.9E-42 1.7E-46 368.0 20.3 255 297-569 9-268 (444)
69 2i1m_A Macrophage colony-stimu 100.0 1E-42 3.5E-47 360.4 14.6 261 294-573 41-324 (333)
70 4fr4_A YANK1, serine/threonine 100.0 4.3E-42 1.5E-46 361.1 19.4 251 299-569 15-272 (384)
71 3lb7_A RAF proto-oncogene seri 100.0 1E-41 3.4E-46 348.9 21.5 257 298-572 35-297 (307)
72 1qpc_A LCK kinase; alpha beta 100.0 2.1E-42 7.1E-47 348.8 15.9 254 296-572 10-266 (279)
73 2vd5_A DMPK protein; serine/th 100.0 8.9E-43 3.1E-47 369.8 13.7 265 290-571 52-330 (412)
74 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-42 4.2E-47 359.5 14.2 247 299-569 9-259 (336)
75 3dtc_A Mitogen-activated prote 100.0 5E-42 1.7E-46 344.4 18.1 253 299-572 7-270 (271)
76 3cc6_A Protein tyrosine kinase 100.0 4.1E-42 1.4E-46 347.1 17.6 255 298-573 11-271 (281)
77 2pvf_A Fibroblast growth facto 100.0 5.8E-42 2E-46 355.1 19.1 257 297-573 33-316 (334)
78 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-42 9.6E-47 372.0 17.3 255 297-574 182-439 (452)
79 3ugc_A Tyrosine-protein kinase 100.0 3.1E-42 1E-46 350.6 16.6 263 298-572 9-288 (295)
80 3a8x_A Protein kinase C IOTA t 100.0 8.7E-42 3E-46 354.9 20.3 257 299-569 9-276 (345)
81 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.5E-42 1.5E-46 357.6 18.1 248 299-571 41-296 (350)
82 2xir_A Vascular endothelial gr 100.0 2.5E-42 8.7E-47 354.5 16.0 266 289-573 17-308 (316)
83 3ork_A Serine/threonine protei 100.0 6.6E-42 2.2E-46 351.0 18.9 255 298-569 11-274 (311)
84 3t9t_A Tyrosine-protein kinase 100.0 2.8E-42 9.7E-47 345.3 15.8 253 298-572 7-261 (267)
85 3dbq_A Dual specificity protei 100.0 3.4E-42 1.2E-46 358.1 16.7 253 298-570 8-275 (343)
86 3lxp_A Non-receptor tyrosine-p 100.0 3.1E-42 1.1E-46 354.6 16.2 266 301-572 33-307 (318)
87 1k9a_A Carboxyl-terminal SRC k 100.0 7.6E-42 2.6E-46 368.4 19.9 247 298-572 192-442 (450)
88 1xjd_A Protein kinase C, theta 100.0 1.7E-42 5.7E-47 359.8 14.2 252 296-569 14-270 (345)
89 3kex_A Receptor tyrosine-prote 100.0 2E-42 6.7E-47 357.2 14.5 254 299-573 13-274 (325)
90 4e5w_A Tyrosine-protein kinase 100.0 1.9E-42 6.6E-47 353.1 14.3 261 299-572 21-299 (302)
91 3kfa_A Tyrosine-protein kinase 100.0 2.3E-42 7.9E-47 350.1 14.6 255 297-573 11-269 (288)
92 3kn6_A Ribosomal protein S6 ki 100.0 4.3E-42 1.5E-46 354.5 16.9 251 304-569 16-271 (325)
93 2w4o_A Calcium/calmodulin-depe 100.0 5.9E-42 2E-46 357.0 18.0 253 297-570 51-307 (349)
94 3p1a_A MYT1 kinase, membrane-a 100.0 7.1E-42 2.4E-46 350.7 18.1 245 299-569 57-305 (311)
95 3a62_A Ribosomal protein S6 ki 100.0 5E-42 1.7E-46 354.4 17.0 252 298-571 16-279 (327)
96 3uc3_A Serine/threonine-protei 100.0 5.7E-42 1.9E-46 358.8 17.4 253 298-569 19-275 (361)
97 3kmu_A ILK, integrin-linked ki 100.0 6.1E-42 2.1E-46 343.4 16.8 248 299-572 10-267 (271)
98 1p4o_A Insulin-like growth fac 100.0 3.1E-42 1E-46 355.1 14.8 267 289-575 15-299 (322)
99 2izr_A Casein kinase I isoform 100.0 2.9E-41 1E-45 349.2 22.2 257 298-572 8-278 (330)
100 4eut_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 360.6 19.8 267 298-572 8-306 (396)
101 3c0i_A Peripheral plasma membr 100.0 2.4E-41 8.3E-46 352.7 21.3 253 298-569 23-287 (351)
102 1csn_A Casein kinase-1; phosph 100.0 5.6E-41 1.9E-45 341.5 23.4 258 298-572 9-280 (298)
103 4ejn_A RAC-alpha serine/threon 100.0 4E-42 1.4E-46 370.5 15.5 253 298-572 147-408 (446)
104 2zmd_A Dual specificity protei 100.0 8.5E-42 2.9E-46 361.1 17.7 252 299-570 56-322 (390)
105 2yex_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 342.0 18.3 254 298-569 6-262 (276)
106 1u59_A Tyrosine-protein kinase 100.0 1.5E-41 5E-46 344.2 18.6 254 299-573 9-270 (287)
107 3qup_A Tyrosine-protein kinase 100.0 7.1E-42 2.4E-46 352.6 16.5 258 296-573 20-296 (323)
108 2i0e_A Protein kinase C-beta I 100.0 6.1E-42 2.1E-46 356.7 16.2 251 297-569 18-277 (353)
109 2eue_A Carbon catabolite derep 100.0 9.6E-42 3.3E-46 343.3 17.1 247 299-569 13-263 (275)
110 4agu_A Cyclin-dependent kinase 100.0 1.5E-41 5E-46 348.2 18.6 268 299-570 3-286 (311)
111 4f0f_A Serine/threonine-protei 100.0 2.3E-41 7.8E-46 342.6 19.6 252 298-572 18-286 (287)
112 2a2a_A Death-associated protei 100.0 6.4E-41 2.2E-45 345.2 23.2 255 298-571 11-275 (321)
113 1xbb_A Tyrosine-protein kinase 100.0 7.8E-42 2.7E-46 346.9 16.1 255 298-573 15-277 (291)
114 3op5_A Serine/threonine-protei 100.0 1.4E-41 4.9E-46 356.4 18.6 265 297-572 33-326 (364)
115 1kob_A Twitchin; kinase, intra 100.0 2.1E-41 7.3E-46 356.9 19.7 252 298-569 50-305 (387)
116 3lxl_A Tyrosine-protein kinase 100.0 5E-42 1.7E-46 354.4 14.5 272 299-576 23-304 (327)
117 1mqb_A Ephrin type-A receptor 100.0 1.9E-41 6.6E-46 350.9 18.6 254 299-572 44-306 (333)
118 3fdn_A Serine/threonine-protei 100.0 1.2E-41 4E-46 343.4 16.6 249 298-570 8-259 (279)
119 3lzb_A Epidermal growth factor 100.0 1.3E-41 4.6E-46 351.2 17.3 255 298-573 14-276 (327)
120 3gni_B Strad alpha; kinase fol 100.0 2.9E-41 9.8E-46 357.4 20.1 269 298-569 24-334 (389)
121 3is5_A Calcium-dependent prote 100.0 5.8E-41 2E-45 339.5 21.4 250 299-569 22-279 (285)
122 3kk8_A Calcium/calmodulin depe 100.0 1E-40 3.5E-45 337.2 23.1 253 298-569 5-262 (284)
123 3hko_A Calcium/calmodulin-depe 100.0 1.5E-41 5.2E-46 353.4 17.3 259 294-569 21-331 (345)
124 3g33_A Cell division protein k 100.0 1.4E-41 4.9E-46 347.9 16.7 267 297-569 7-297 (308)
125 1vzo_A Ribosomal protein S6 ki 100.0 7.3E-42 2.5E-46 357.3 14.7 258 299-573 54-326 (355)
126 3dls_A PAS domain-containing s 100.0 1.1E-41 3.9E-46 352.8 15.9 245 297-570 22-276 (335)
127 2y94_A 5'-AMP-activated protei 100.0 1.7E-41 5.8E-46 366.2 17.9 248 299-569 16-267 (476)
128 3pls_A Macrophage-stimulating 100.0 2.9E-41 9.9E-46 343.6 18.4 254 300-572 22-284 (298)
129 2h34_A Serine/threonine-protei 100.0 9.2E-41 3.2E-45 342.1 22.0 259 298-574 33-295 (309)
130 2v62_A Serine/threonine-protei 100.0 2.7E-41 9.2E-46 351.7 18.1 266 299-575 37-328 (345)
131 3llt_A Serine/threonine kinase 100.0 2.9E-41 9.8E-46 353.5 18.2 275 285-569 21-356 (360)
132 1fvr_A Tyrosine-protein kinase 100.0 2.2E-41 7.7E-46 349.5 17.1 252 299-572 25-297 (327)
133 2acx_A G protein-coupled recep 100.0 2.7E-41 9.4E-46 369.6 18.4 254 298-570 183-446 (576)
134 2eva_A TAK1 kinase - TAB1 chim 100.0 3.4E-41 1.2E-45 345.0 17.9 250 299-573 8-261 (307)
135 3mtl_A Cell division protein k 100.0 3.9E-42 1.4E-46 354.8 11.0 263 299-570 2-283 (324)
136 3c1x_A Hepatocyte growth facto 100.0 1.8E-41 6.1E-46 356.2 16.2 253 300-572 90-352 (373)
137 2ozo_A Tyrosine-protein kinase 100.0 3.3E-41 1.1E-45 376.3 19.2 246 306-572 343-595 (613)
138 2r5t_A Serine/threonine-protei 100.0 1.2E-41 3.9E-46 357.2 14.4 253 299-573 38-294 (373)
139 3f66_A Hepatocyte growth facto 100.0 3.9E-41 1.3E-45 342.9 17.9 255 298-572 24-288 (298)
140 2h8h_A Proto-oncogene tyrosine 100.0 9.5E-42 3.3E-46 375.2 14.2 255 296-573 264-521 (535)
141 3cok_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 339.7 16.9 249 299-569 11-263 (278)
142 3f3z_A Calcium/calmodulin-depe 100.0 6.8E-41 2.3E-45 337.4 19.0 251 298-569 8-262 (277)
143 3og7_A AKAP9-BRAF fusion prote 100.0 5.6E-41 1.9E-45 340.3 18.5 259 297-573 22-286 (289)
144 1nxk_A MAP kinase-activated pr 100.0 1.2E-40 4.2E-45 353.3 21.9 251 299-570 61-323 (400)
145 4hgt_A Casein kinase I isoform 100.0 4.2E-40 1.4E-44 334.6 25.0 259 297-572 7-277 (296)
146 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-41 4.5E-46 351.6 14.1 266 297-570 32-320 (329)
147 3mdy_A Bone morphogenetic prot 100.0 2.9E-40 9.9E-45 342.4 24.2 270 290-572 28-328 (337)
148 3oz6_A Mitogen-activated prote 100.0 2.1E-41 7.3E-46 358.3 15.9 267 297-569 7-329 (388)
149 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-41 6.3E-46 352.0 15.1 253 297-569 20-278 (342)
150 3bhy_A Death-associated protei 100.0 1.8E-40 6.2E-45 335.2 21.6 252 299-569 5-266 (283)
151 3a7i_A MST3 kinase, serine/thr 100.0 8.3E-41 2.9E-45 341.3 19.2 251 298-570 21-272 (303)
152 3uzp_A CKI-delta, CKID, casein 100.0 5.5E-40 1.9E-44 333.8 25.1 258 298-572 8-277 (296)
153 4fvq_A Tyrosine-protein kinase 100.0 1.5E-41 5.2E-46 344.2 13.3 252 298-576 7-276 (289)
154 2x4f_A Myosin light chain kina 100.0 3.7E-41 1.3E-45 353.9 16.4 246 304-569 94-343 (373)
155 3i6u_A CDS1, serine/threonine- 100.0 7E-41 2.4E-45 357.5 18.8 256 296-570 132-401 (419)
156 3gxj_A TGF-beta receptor type- 100.0 2.8E-42 9.7E-47 351.8 7.3 259 298-576 2-298 (303)
157 1x8b_A WEE1HU, WEE1-like prote 100.0 6.2E-41 2.1E-45 339.0 17.1 246 297-570 9-281 (289)
158 3ttj_A Mitogen-activated prote 100.0 9E-41 3.1E-45 360.8 19.4 265 298-570 61-357 (464)
159 1u5q_A Serine/threonine protei 100.0 4.9E-41 1.7E-45 349.7 16.7 247 299-570 54-307 (348)
160 2yfx_A Tyrosine-protein kinase 100.0 4.6E-41 1.6E-45 347.2 16.4 255 298-572 29-301 (327)
161 3lm5_A Serine/threonine-protei 100.0 1.1E-40 3.9E-45 344.3 19.1 263 289-570 18-289 (327)
162 3brb_A Proto-oncogene tyrosine 100.0 7.8E-41 2.7E-45 343.2 17.7 258 295-572 30-305 (313)
163 3eqc_A Dual specificity mitoge 100.0 2E-41 6.9E-46 354.7 13.5 267 298-569 32-325 (360)
164 2a19_B Interferon-induced, dou 100.0 1.8E-40 6.1E-45 335.2 19.9 245 297-573 9-272 (284)
165 2vgo_A Serine/threonine-protei 100.0 6.5E-41 2.2E-45 338.8 16.6 247 299-569 14-263 (284)
166 2ac3_A MAP kinase-interacting 100.0 2.7E-40 9.1E-45 339.6 21.1 257 299-570 12-297 (316)
167 4aaa_A Cyclin-dependent kinase 100.0 2.4E-41 8.3E-46 349.9 13.0 267 299-569 25-307 (331)
168 4fl3_A Tyrosine-protein kinase 100.0 8.2E-41 2.8E-45 374.0 18.1 247 305-572 375-628 (635)
169 2rku_A Serine/threonine-protei 100.0 7.9E-41 2.7E-45 340.0 16.4 250 298-569 14-266 (294)
170 2w5a_A Serine/threonine-protei 100.0 2E-41 6.9E-46 341.5 11.9 255 298-573 5-272 (279)
171 2y7j_A Phosphorylase B kinase 100.0 8.1E-40 2.8E-44 343.0 24.5 259 292-569 87-360 (365)
172 2wqm_A Serine/threonine-protei 100.0 1.6E-40 5.6E-45 340.3 18.8 257 299-573 32-295 (310)
173 1byg_A CSK, protein (C-termina 100.0 6.6E-41 2.3E-45 337.7 15.5 247 298-572 20-270 (278)
174 1b6c_B TGF-B superfamily recep 100.0 4.8E-40 1.6E-44 341.5 22.5 268 290-573 33-334 (342)
175 2owb_A Serine/threonine-protei 100.0 8.6E-41 2.9E-45 346.4 16.5 249 299-569 41-292 (335)
176 2buj_A Serine/threonine-protei 100.0 9.9E-41 3.4E-45 343.0 16.8 260 298-576 28-307 (317)
177 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.1E-40 1.4E-44 345.5 21.8 248 296-572 62-336 (365)
178 1t4h_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 337.2 17.8 249 299-569 26-283 (290)
179 3n9x_A Phosphotransferase; mal 100.0 6.6E-40 2.3E-44 351.5 23.6 200 298-501 25-253 (432)
180 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.8E-40 6.1E-45 362.3 19.2 254 298-569 184-449 (543)
181 2jii_A Serine/threonine-protei 100.0 1.1E-40 3.9E-45 348.0 16.8 258 298-572 41-333 (352)
182 3g2f_A Bone morphogenetic prot 100.0 5.3E-41 1.8E-45 347.9 14.1 270 298-573 12-316 (336)
183 2h6d_A 5'-AMP-activated protei 100.0 1.2E-40 4E-45 335.4 15.5 248 299-569 11-262 (276)
184 3pg1_A Mitogen-activated prote 100.0 6.1E-41 2.1E-45 351.3 14.0 275 291-571 14-319 (362)
185 3rp9_A Mitogen-activated prote 100.0 7.1E-40 2.4E-44 354.3 22.8 195 298-496 52-280 (458)
186 3byv_A Rhoptry kinase; malaria 100.0 2E-41 6.9E-46 357.0 10.4 241 298-569 72-360 (377)
187 2vwi_A Serine/threonine-protei 100.0 4.7E-41 1.6E-45 342.8 12.5 261 296-569 12-288 (303)
188 1cm8_A Phosphorylated MAP kina 100.0 1.7E-40 5.8E-45 348.3 17.1 263 298-570 24-309 (367)
189 3nyv_A Calmodulin-domain prote 100.0 4.6E-40 1.6E-44 358.3 20.5 252 298-569 25-282 (484)
190 3mi9_A Cell division protein k 100.0 2.5E-40 8.5E-45 345.2 17.5 264 299-570 17-313 (351)
191 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-39 3.9E-44 356.8 23.4 253 297-569 34-302 (504)
192 3nsz_A CK II alpha, casein kin 100.0 1.1E-39 3.7E-44 337.2 21.9 258 299-570 36-321 (330)
193 2ycf_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 336.3 21.7 255 297-570 8-276 (322)
194 1ua2_A CAK, cell division prot 100.0 1.7E-40 5.9E-45 345.7 15.8 267 297-571 8-294 (346)
195 2r3i_A Cell division protein k 100.0 2.5E-40 8.5E-45 337.0 16.6 263 299-569 3-284 (299)
196 1u46_A ACK-1, activated CDC42 100.0 1.5E-40 5E-45 337.2 14.8 256 298-573 17-282 (291)
197 2w1i_A JAK2; chromosomal rearr 100.0 4.1E-40 1.4E-44 340.0 18.4 266 298-572 40-319 (326)
198 3lij_A Calcium/calmodulin depe 100.0 1.1E-39 3.9E-44 355.9 22.9 252 298-569 36-292 (494)
199 3mwu_A Calmodulin-domain prote 100.0 8.9E-40 3E-44 356.1 22.0 252 298-569 21-277 (486)
200 2clq_A Mitogen-activated prote 100.0 8.8E-40 3E-44 332.2 20.4 250 300-569 23-279 (295)
201 3eb0_A Putative uncharacterize 100.0 1.4E-40 4.9E-45 351.3 15.0 264 295-569 3-322 (383)
202 3fme_A Dual specificity mitoge 100.0 1.9E-40 6.6E-45 336.2 15.4 252 298-569 6-267 (290)
203 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-40 7.6E-45 373.0 17.5 251 297-569 339-598 (674)
204 3ll6_A Cyclin G-associated kin 100.0 6.7E-41 2.3E-45 346.9 12.1 251 298-573 27-306 (337)
205 2jam_A Calcium/calmodulin-depe 100.0 2.2E-40 7.5E-45 338.5 15.6 251 298-569 8-262 (304)
206 3qyz_A Mitogen-activated prote 100.0 1.3E-39 4.5E-44 341.5 21.2 268 298-570 26-315 (364)
207 3com_A Serine/threonine-protei 100.0 9.8E-40 3.4E-44 335.1 19.8 251 297-569 27-279 (314)
208 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-40 4.3E-45 350.1 13.4 255 298-569 61-353 (371)
209 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-40 1.2E-44 343.5 16.6 259 298-570 30-324 (348)
210 2x7f_A TRAF2 and NCK-interacti 100.0 2E-40 6.7E-45 342.2 14.4 260 288-569 13-287 (326)
211 3an0_A Dual specificity mitoge 100.0 2.5E-40 8.6E-45 343.6 15.3 253 297-569 49-311 (340)
212 1phk_A Phosphorylase kinase; g 100.0 8.3E-40 2.8E-44 333.0 18.4 254 297-569 15-284 (298)
213 3cek_A Dual specificity protei 100.0 6.2E-40 2.1E-44 336.6 17.2 256 295-570 24-294 (313)
214 2j0j_A Focal adhesion kinase 1 100.0 4.6E-40 1.6E-44 369.4 17.2 257 296-573 387-649 (656)
215 4e7w_A Glycogen synthase kinas 100.0 3.4E-40 1.2E-44 349.5 15.0 261 299-569 40-322 (394)
216 2b9h_A MAP kinase FUS3, mitoge 100.0 2.4E-40 8.1E-45 345.5 13.6 268 298-570 10-307 (353)
217 3sv0_A Casein kinase I-like; t 100.0 6.8E-39 2.3E-43 346.5 25.4 259 298-573 6-276 (483)
218 2xrw_A Mitogen-activated prote 100.0 2.7E-39 9.4E-44 339.9 21.6 265 298-570 24-320 (371)
219 3kvw_A DYRK2, dual specificity 100.0 6.4E-40 2.2E-44 351.0 16.7 197 298-504 96-303 (429)
220 1blx_A Cyclin-dependent kinase 100.0 7.9E-40 2.7E-44 337.5 16.7 264 297-569 9-297 (326)
221 2j7t_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 332.1 18.0 255 297-571 17-278 (302)
222 1wak_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 342.1 21.3 263 298-569 36-392 (397)
223 3e3p_A Protein kinase, putativ 100.0 1E-39 3.5E-44 341.6 16.9 271 292-570 16-316 (360)
224 2wtk_C Serine/threonine-protei 100.0 3.8E-39 1.3E-43 329.2 20.4 250 298-569 4-264 (305)
225 2fst_X Mitogen-activated prote 100.0 1.4E-39 4.6E-44 341.3 17.3 263 298-570 28-313 (367)
226 1z57_A Dual specificity protei 100.0 3.1E-39 1E-43 334.6 19.7 258 298-569 13-329 (339)
227 1j1b_A Glycogen synthase kinas 100.0 7.2E-40 2.5E-44 349.8 15.1 258 299-570 54-338 (420)
228 2y4i_B KSR2, HKSR2, kinase sup 100.0 3E-40 1E-44 339.6 10.9 260 293-574 27-301 (319)
229 2wei_A Calmodulin-domain prote 100.0 9.2E-39 3.1E-43 323.6 20.7 253 297-569 20-277 (287)
230 3aln_A Dual specificity mitoge 100.0 1.9E-39 6.5E-44 335.1 15.8 255 298-569 21-286 (327)
231 3rgf_A Cyclin-dependent kinase 100.0 2.5E-39 8.6E-44 344.3 16.5 265 300-571 21-336 (405)
232 4exu_A Mitogen-activated prote 100.0 1E-38 3.6E-43 335.4 20.5 263 298-571 41-326 (371)
233 1zy4_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 327.4 16.9 252 298-570 5-285 (303)
234 2iwi_A Serine/threonine-protei 100.0 2.9E-39 9.9E-44 331.3 14.8 247 295-571 27-286 (312)
235 2vx3_A Dual specificity tyrosi 100.0 3.3E-38 1.1E-42 333.0 23.2 201 296-504 51-262 (382)
236 3a99_A Proto-oncogene serine/t 100.0 4.4E-39 1.5E-43 331.4 16.0 246 295-570 39-295 (320)
237 3coi_A Mitogen-activated prote 100.0 6.4E-39 2.2E-43 334.8 16.9 259 298-570 23-307 (353)
238 2eu9_A Dual specificity protei 100.0 2.2E-38 7.4E-43 330.5 19.4 258 298-569 18-334 (355)
239 2i6l_A Mitogen-activated prote 100.0 2.4E-39 8.4E-44 332.6 12.1 263 298-569 10-306 (320)
240 3fhr_A MAP kinase-activated pr 100.0 1.2E-38 4.2E-43 330.3 17.2 251 298-569 27-288 (336)
241 1q8y_A SR protein kinase; tran 100.0 2.6E-38 9E-43 332.5 19.1 263 299-570 19-335 (373)
242 2rio_A Serine/threonine-protei 100.0 2E-38 6.9E-43 340.1 18.4 250 300-570 16-297 (434)
243 2dyl_A Dual specificity mitoge 100.0 5.3E-38 1.8E-42 322.6 19.8 252 298-569 24-284 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 8.6E-39 2.9E-43 353.2 9.6 264 298-566 13-295 (676)
245 3p23_A Serine/threonine-protei 100.0 1E-37 3.5E-42 333.8 17.2 250 298-570 23-285 (432)
246 2pzi_A Probable serine/threoni 100.0 2.2E-37 7.6E-42 350.6 17.7 237 299-571 80-324 (681)
247 3uqc_A Probable conserved tran 100.0 1.9E-36 6.4E-41 306.4 17.0 230 299-573 31-263 (286)
248 2vuw_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 318.5 10.5 244 298-569 19-332 (336)
249 3m2w_A MAP kinase-activated pr 100.0 3.7E-36 1.3E-40 306.4 16.4 225 299-569 17-257 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 1.7E-36 6E-41 322.9 11.0 241 298-569 77-364 (413)
251 4azs_A Methyltransferase WBDD; 100.0 3.5E-30 1.2E-34 283.9 8.5 187 306-500 241-438 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.3E-26 4.3E-31 237.4 10.6 171 27-199 2-187 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.3E-26 4.6E-31 253.9 10.3 185 302-500 339-538 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 1.2E-23 4.1E-28 211.5 10.8 153 293-474 84-253 (282)
255 3rgz_A Protein brassinosteroid 99.9 2.1E-23 7.2E-28 239.5 7.7 155 27-184 8-168 (768)
256 4ecn_A Leucine-rich repeat pro 99.9 5.1E-23 1.7E-27 235.9 7.8 169 27-200 265-562 (876)
257 4eco_A Uncharacterized protein 99.9 1.6E-22 5.4E-27 227.0 10.0 168 30-199 29-318 (636)
258 4fcg_A Uncharacterized protein 99.8 4.6E-22 1.6E-26 204.8 4.1 171 25-199 21-219 (328)
259 3e6j_A Variable lymphocyte rec 99.8 1.6E-20 5.6E-25 182.8 12.8 145 58-203 16-176 (229)
260 2v9t_B SLIT homolog 2 protein 99.8 4.8E-20 1.6E-24 178.3 11.5 144 60-203 10-169 (220)
261 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-19 3.8E-24 175.7 10.3 144 60-203 10-170 (220)
262 2o6s_A Variable lymphocyte rec 99.8 5.3E-19 1.8E-23 169.4 13.0 145 59-203 5-165 (208)
263 1zth_A RIO1 serine protein kin 99.8 3.6E-19 1.2E-23 176.5 12.0 139 300-450 48-220 (258)
264 3m19_A Variable lymphocyte rec 99.7 4.3E-18 1.5E-22 168.1 11.5 128 72-199 36-168 (251)
265 1w8a_A SLIT protein; signaling 99.7 2.3E-18 7.8E-23 162.8 8.0 125 60-184 7-143 (192)
266 3m19_A Variable lymphocyte rec 99.7 2.9E-17 1E-21 162.1 12.5 131 71-201 59-194 (251)
267 2o6q_A Variable lymphocyte rec 99.7 3E-17 1E-21 163.9 12.6 128 72-199 38-170 (270)
268 1w8a_A SLIT protein; signaling 99.7 2.7E-17 9.2E-22 155.4 9.3 127 74-203 11-143 (192)
269 2o6r_A Variable lymphocyte rec 99.7 4.6E-17 1.6E-21 151.6 9.7 125 60-184 6-141 (177)
270 2wfh_A SLIT homolog 2 protein 99.7 8.3E-17 2.8E-21 152.1 11.1 125 75-203 14-143 (193)
271 3rgz_A Protein brassinosteroid 99.7 1.3E-17 4.5E-22 191.3 6.6 135 75-210 612-750 (768)
272 4gyi_A RIO2 kinase; protein ki 99.7 3.5E-17 1.2E-21 168.8 8.7 142 299-451 95-267 (397)
273 3rfs_A Internalin B, repeat mo 99.7 1.2E-16 4.2E-21 159.6 12.5 133 71-203 85-222 (272)
274 3oja_A Leucine-rich immune mol 99.7 1.1E-18 3.7E-23 189.3 -3.5 126 72-201 121-252 (487)
275 2xot_A Amphoterin-induced prot 99.7 4.5E-17 1.5E-21 169.8 8.7 139 61-199 18-176 (361)
276 4g8a_A TOLL-like receptor 4; l 99.7 7.8E-17 2.7E-21 180.5 10.8 157 45-201 8-188 (635)
277 2o6q_A Variable lymphocyte rec 99.7 3.2E-16 1.1E-20 156.4 12.5 128 72-199 62-194 (270)
278 1p9a_G Platelet glycoprotein I 99.7 2.9E-16 9.8E-21 158.4 12.0 130 72-202 78-211 (290)
279 2wfh_A SLIT homolog 2 protein 99.6 3.5E-16 1.2E-20 147.8 9.6 124 60-184 9-143 (193)
280 1ogq_A PGIP-2, polygalacturona 99.6 6.1E-17 2.1E-21 165.3 4.6 127 71-199 149-281 (313)
281 1ozn_A Reticulon 4 receptor; N 99.6 2.1E-16 7E-21 159.1 8.3 127 72-198 81-213 (285)
282 3v47_A TOLL-like receptor 5B a 99.6 3.4E-16 1.2E-20 168.3 9.2 133 71-203 275-412 (455)
283 2z66_A Variable lymphocyte rec 99.6 4E-16 1.4E-20 158.6 8.2 129 71-199 101-236 (306)
284 2o6r_A Variable lymphocyte rec 99.6 1.4E-15 4.7E-20 141.6 11.1 128 73-203 9-141 (177)
285 2z62_A TOLL-like receptor 4, v 99.6 1.5E-15 5.1E-20 152.0 11.5 128 72-199 29-162 (276)
286 3vq2_A TLR4, TOLL-like recepto 99.6 1.7E-15 5.9E-20 169.0 12.3 144 58-201 4-168 (606)
287 2v70_A SLIT-2, SLIT homolog 2 99.6 9.2E-16 3.1E-20 148.1 8.5 115 70-184 56-170 (220)
288 1ozn_A Reticulon 4 receptor; N 99.6 3.4E-15 1.2E-19 150.1 11.5 129 71-199 32-166 (285)
289 2ell_A Acidic leucine-rich nuc 99.6 6.5E-16 2.2E-20 142.4 5.6 128 71-200 24-161 (168)
290 3v47_A TOLL-like receptor 5B a 99.6 1.2E-15 4E-20 164.1 8.3 142 59-200 6-168 (455)
291 4b8c_D Glucose-repressible alc 99.6 8.6E-16 2.9E-20 174.3 7.2 168 28-199 129-329 (727)
292 2z80_A TOLL-like receptor 2, v 99.6 9.3E-16 3.2E-20 159.3 6.4 139 59-199 28-187 (353)
293 2z81_A CD282 antigen, TOLL-lik 99.6 8.1E-16 2.8E-20 169.5 6.2 140 60-200 3-162 (549)
294 3rfs_A Internalin B, repeat mo 99.6 7.6E-15 2.6E-19 146.5 12.3 128 71-200 63-195 (272)
295 4g8a_A TOLL-like receptor 4; l 99.6 1.9E-15 6.3E-20 169.3 8.7 133 71-203 445-584 (635)
296 3j0a_A TOLL-like receptor 5; m 99.6 4.2E-15 1.4E-19 172.2 10.8 132 71-204 426-565 (844)
297 3g39_A Variable lymphocyte rec 99.6 6.1E-15 2.1E-19 136.2 9.5 108 75-185 13-120 (170)
298 1p9a_G Platelet glycoprotein I 99.6 9E-15 3.1E-19 147.4 11.3 126 71-199 31-161 (290)
299 2xwt_C Thyrotropin receptor; s 99.6 2.2E-15 7.5E-20 147.4 6.6 127 71-199 31-169 (239)
300 3oja_B Anopheles plasmodium-re 99.6 3.2E-15 1.1E-19 166.5 8.8 153 47-200 6-185 (597)
301 4fcg_A Uncharacterized protein 99.6 2.9E-15 1E-19 153.8 7.8 126 71-199 127-266 (328)
302 2id5_A Lingo-1, leucine rich r 99.6 4.9E-15 1.7E-19 160.3 9.8 139 62-200 12-166 (477)
303 2v9t_B SLIT homolog 2 protein 99.6 6.5E-15 2.2E-19 142.1 9.5 114 71-184 56-169 (220)
304 2je0_A Acidic leucine-rich nuc 99.6 8.3E-16 2.8E-20 138.7 2.6 112 71-184 17-130 (149)
305 3zyj_A Leucine-rich repeat-con 99.5 8.4E-15 2.9E-19 156.8 10.6 130 72-203 137-296 (440)
306 3vq2_A TLR4, TOLL-like recepto 99.5 3.2E-15 1.1E-19 166.8 7.2 132 72-203 425-562 (606)
307 2r9u_A Variable lymphocyte rec 99.5 1.2E-14 4.1E-19 134.7 9.6 108 74-184 15-122 (174)
308 2o6s_A Variable lymphocyte rec 99.5 1.8E-14 6.1E-19 137.7 10.6 127 71-199 52-178 (208)
309 3e6j_A Variable lymphocyte rec 99.5 1.7E-14 5.7E-19 140.1 9.7 113 71-184 64-176 (229)
310 3t6q_A CD180 antigen; protein- 99.5 1.4E-14 4.9E-19 161.6 10.3 138 63-200 14-167 (606)
311 1ziw_A TOLL-like receptor 3; i 99.5 1.7E-14 5.9E-19 163.2 11.1 140 61-200 4-159 (680)
312 3zyj_A Leucine-rich repeat-con 99.5 1.8E-14 6.3E-19 154.2 10.7 138 63-200 45-199 (440)
313 3zyi_A Leucine-rich repeat-con 99.5 1.5E-14 5E-19 155.5 10.0 138 63-200 56-210 (452)
314 3o6n_A APL1; leucine-rich repe 99.5 9.6E-15 3.3E-19 153.8 8.1 130 71-200 45-179 (390)
315 3zyi_A Leucine-rich repeat-con 99.5 1.5E-14 5.1E-19 155.4 9.7 132 71-204 147-308 (452)
316 2z62_A TOLL-like receptor 4, v 99.5 1.3E-14 4.4E-19 145.1 8.5 128 71-198 76-212 (276)
317 3t6q_A CD180 antigen; protein- 99.5 1.1E-14 3.7E-19 162.5 7.8 131 72-203 426-564 (606)
318 2z63_A TOLL-like receptor 4, v 99.5 1.4E-14 4.7E-19 160.3 8.4 132 72-203 397-535 (570)
319 2ft3_A Biglycan; proteoglycan, 99.5 3.4E-14 1.2E-18 146.1 10.0 137 61-200 33-186 (332)
320 3g39_A Variable lymphocyte rec 99.5 4E-14 1.4E-18 130.7 9.4 104 97-203 11-119 (170)
321 3j0a_A TOLL-like receptor 5; m 99.5 1.9E-14 6.5E-19 166.7 8.8 139 61-199 14-161 (844)
322 2z66_A Variable lymphocyte rec 99.5 2.1E-14 7.3E-19 145.8 7.7 130 71-201 78-214 (306)
323 2ifg_A High affinity nerve gro 99.5 1.7E-14 5.8E-19 149.3 6.6 130 61-203 8-145 (347)
324 4b8c_D Glucose-repressible alc 99.5 8.5E-15 2.9E-19 166.1 4.2 126 70-199 223-354 (727)
325 1xku_A Decorin; proteoglycan, 99.5 4.3E-14 1.5E-18 145.2 8.9 137 60-199 30-184 (330)
326 3oja_B Anopheles plasmodium-re 99.5 6.6E-14 2.2E-18 155.8 10.9 130 71-200 75-206 (597)
327 2z63_A TOLL-like receptor 4, v 99.5 8.4E-14 2.9E-18 154.0 11.4 130 71-200 28-163 (570)
328 2r9u_A Variable lymphocyte rec 99.5 8.6E-14 2.9E-18 128.9 9.5 103 98-203 15-122 (174)
329 3cvr_A Invasion plasmid antige 99.5 2.3E-14 8E-19 157.0 6.2 134 50-200 33-174 (571)
330 2id5_A Lingo-1, leucine rich r 99.5 3.5E-14 1.2E-18 153.6 7.4 131 73-203 202-337 (477)
331 1ziw_A TOLL-like receptor 3; i 99.5 6.1E-14 2.1E-18 158.7 9.4 133 72-204 481-627 (680)
332 4eco_A Uncharacterized protein 99.5 1E-14 3.5E-19 163.5 2.9 137 61-199 193-366 (636)
333 1dce_A Protein (RAB geranylger 99.5 3.8E-14 1.3E-18 155.9 6.9 109 72-185 442-551 (567)
334 3o6n_A APL1; leucine-rich repe 99.5 1.5E-13 5E-18 144.7 11.0 128 71-199 69-199 (390)
335 4ezg_A Putative uncharacterize 99.5 3.7E-14 1.2E-18 134.3 5.5 123 72-199 45-172 (197)
336 2z7x_B TOLL-like receptor 1, v 99.4 5.7E-14 1.9E-18 153.7 7.3 108 71-180 324-434 (520)
337 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 1.1E-13 3.9E-18 152.8 9.5 132 71-202 353-513 (562)
338 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 8.5E-14 2.9E-18 153.9 8.1 125 71-198 52-181 (562)
339 2xot_A Amphoterin-induced prot 99.4 8.8E-14 3E-18 144.8 7.4 133 71-203 64-206 (361)
340 4ezg_A Putative uncharacterize 99.4 6.7E-14 2.3E-18 132.5 5.4 124 71-198 66-193 (197)
341 2z80_A TOLL-like receptor 2, v 99.4 7.8E-14 2.7E-18 144.7 6.4 127 71-198 76-210 (353)
342 3o53_A Protein LRIM1, AGAP0063 99.4 8.2E-14 2.8E-18 142.3 6.1 106 72-182 100-206 (317)
343 4glp_A Monocyte differentiatio 99.4 7.9E-14 2.7E-18 141.9 6.0 127 71-199 145-285 (310)
344 1xku_A Decorin; proteoglycan, 99.4 2.9E-13 1E-17 138.9 10.1 125 71-199 145-276 (330)
345 2xwt_C Thyrotropin receptor; s 99.4 1.3E-13 4.3E-18 134.8 6.7 127 71-199 55-193 (239)
346 1wwl_A Monocyte differentiatio 99.4 2.2E-14 7.6E-19 146.2 1.4 127 72-199 96-241 (312)
347 4ecn_A Leucine-rich repeat pro 99.4 5.6E-14 1.9E-18 161.1 3.6 136 61-199 435-608 (876)
348 1a9n_A U2A', U2A'; complex (nu 99.4 5.8E-14 2E-18 130.4 2.9 124 71-199 19-153 (176)
349 2ell_A Acidic leucine-rich nuc 99.4 1E-13 3.4E-18 127.6 4.3 111 71-183 49-163 (168)
350 1wwl_A Monocyte differentiatio 99.4 6.5E-14 2.2E-18 142.7 3.2 128 71-199 121-266 (312)
351 2ft3_A Biglycan; proteoglycan, 99.4 1.1E-12 3.6E-17 134.9 11.7 123 73-199 125-254 (332)
352 4glp_A Monocyte differentiatio 99.4 2.4E-13 8.3E-18 138.3 6.3 125 71-199 169-307 (310)
353 2z81_A CD282 antigen, TOLL-lik 99.4 2.4E-13 8.1E-18 149.7 6.6 128 71-198 50-184 (549)
354 3oja_A Leucine-rich immune mol 99.4 1.3E-13 4.5E-18 149.3 4.4 31 339-369 322-352 (487)
355 2ifg_A High affinity nerve gro 99.4 3.8E-13 1.3E-17 139.1 6.3 104 98-203 11-120 (347)
356 2z7x_B TOLL-like receptor 1, v 99.4 4.5E-13 1.5E-17 146.5 6.8 127 72-200 303-435 (520)
357 1h6t_A Internalin B; cell adhe 99.3 1.1E-12 3.8E-17 132.1 8.5 122 71-200 68-192 (291)
358 1xeu_A Internalin C; cellular 99.3 1.2E-12 4E-17 129.9 8.3 121 71-201 63-187 (263)
359 1ds9_A Outer arm dynein; leuci 99.3 4.5E-15 1.5E-19 140.7 -9.0 125 72-201 19-155 (198)
360 2je0_A Acidic leucine-rich nuc 99.3 1.6E-13 5.5E-18 123.5 1.2 104 71-176 42-149 (149)
361 1h6u_A Internalin H; cell adhe 99.3 1.3E-12 4.4E-17 132.8 7.2 123 71-201 85-210 (308)
362 4ay9_X Follicle-stimulating ho 99.3 1.4E-12 4.8E-17 135.0 7.5 139 61-199 9-167 (350)
363 1xeu_A Internalin C; cellular 99.3 2.7E-12 9.1E-17 127.3 8.9 122 71-201 41-165 (263)
364 1h6t_A Internalin B; cell adhe 99.3 2.3E-12 7.7E-17 129.8 8.2 121 71-200 90-214 (291)
365 1h6u_A Internalin H; cell adhe 99.3 3.2E-12 1.1E-16 129.8 9.0 121 71-199 63-186 (308)
366 1a9n_A U2A', U2A'; complex (nu 99.3 5.8E-13 2E-17 123.6 2.9 106 71-180 42-153 (176)
367 1m9s_A Internalin B; cell inva 99.3 4.3E-12 1.5E-16 140.4 9.1 122 71-200 65-189 (605)
368 4fmz_A Internalin; leucine ric 99.3 3E-12 1E-16 132.2 6.6 122 71-200 199-325 (347)
369 3o53_A Protein LRIM1, AGAP0063 99.3 2.5E-12 8.6E-17 131.2 5.3 106 72-180 121-227 (317)
370 3tm0_A Aminoglycoside 3'-phosp 99.3 2.8E-11 9.5E-16 119.8 12.7 145 296-447 11-212 (263)
371 3g06_A SSPH2 (leucine-rich rep 99.3 1.9E-12 6.6E-17 143.5 4.4 138 47-200 9-155 (622)
372 1dce_A Protein (RAB geranylger 99.2 6.6E-12 2.3E-16 138.1 8.4 101 96-201 442-548 (567)
373 1m9s_A Internalin B; cell inva 99.2 8.1E-12 2.8E-16 138.2 8.9 123 70-201 86-212 (605)
374 3cvr_A Invasion plasmid antige 99.2 1.2E-11 4.3E-16 135.4 9.1 114 71-201 100-222 (571)
375 1o6v_A Internalin A; bacterial 99.2 1.5E-11 5.2E-16 132.5 7.9 104 71-182 243-346 (466)
376 1nd4_A Aminoglycoside 3'-phosp 99.2 7.2E-11 2.5E-15 116.4 11.3 137 300-448 21-214 (264)
377 3bz5_A Internalin-J, INLJ; leu 99.2 5.8E-11 2E-15 127.4 10.8 116 71-197 42-159 (457)
378 4fmz_A Internalin; leucine ric 99.2 2.1E-11 7.1E-16 125.9 6.1 120 71-199 177-300 (347)
379 1o6v_A Internalin A; bacterial 99.1 4E-11 1.4E-15 129.1 8.2 123 71-201 221-346 (466)
380 1jl5_A Outer protein YOPM; leu 99.1 1.1E-10 3.6E-15 125.2 11.3 115 72-199 132-250 (454)
381 3bz5_A Internalin-J, INLJ; leu 99.1 1E-10 3.4E-15 125.5 11.0 119 71-200 127-247 (457)
382 1ds9_A Outer arm dynein; leuci 99.1 2.1E-13 7.2E-18 129.2 -9.3 110 71-185 48-158 (198)
383 1jl5_A Outer protein YOPM; leu 99.1 1.4E-10 4.8E-15 124.2 11.0 96 95-199 131-228 (454)
384 2ast_B S-phase kinase-associat 99.1 1.2E-12 4.1E-17 134.5 -6.5 136 59-198 35-181 (336)
385 3dxp_A Putative acyl-COA dehyd 99.1 6.2E-10 2.1E-14 115.5 13.6 142 304-448 43-248 (359)
386 3goz_A Leucine-rich repeat-con 99.1 1.2E-11 4E-16 128.7 -1.1 110 72-181 23-152 (362)
387 3g06_A SSPH2 (leucine-rich rep 99.0 3.2E-10 1.1E-14 125.7 9.8 52 143-199 221-274 (622)
388 4ay9_X Follicle-stimulating ho 99.0 1.3E-10 4.4E-15 120.2 6.1 116 67-188 8-125 (350)
389 2ca6_A RAN GTPase-activating p 99.0 3.3E-12 1.1E-16 134.1 -6.1 130 71-200 122-288 (386)
390 3goz_A Leucine-rich repeat-con 99.0 1E-11 3.5E-16 129.1 -3.1 112 72-183 52-183 (362)
391 2ast_B S-phase kinase-associat 99.0 5.5E-12 1.9E-16 129.6 -5.9 128 71-198 93-234 (336)
392 2ca6_A RAN GTPase-activating p 99.0 4.5E-12 1.6E-16 133.0 -6.9 110 71-180 94-229 (386)
393 3sg8_A APH(2'')-ID; antibiotic 99.0 5.2E-10 1.8E-14 113.2 8.1 187 304-501 25-288 (304)
394 1z7x_W Ribonuclease inhibitor; 98.8 4.5E-11 1.5E-15 128.4 -9.7 129 71-199 227-383 (461)
395 3rw6_A Nuclear RNA export fact 98.7 1.1E-10 3.7E-15 114.7 -8.4 67 116-184 167-237 (267)
396 3un9_A NLR family member X1; l 98.6 3.5E-10 1.2E-14 117.7 -8.8 129 71-199 101-252 (372)
397 3rw6_A Nuclear RNA export fact 98.6 3.2E-09 1.1E-13 104.2 -2.1 80 92-173 167-257 (267)
398 1z7x_W Ribonuclease inhibitor; 98.6 8.5E-10 2.9E-14 118.3 -7.1 129 71-199 256-411 (461)
399 3r70_A Aminoglycoside phosphot 98.6 4.6E-07 1.6E-11 92.1 13.5 137 300-449 38-238 (320)
400 3d1u_A Putative fructosamine-3 98.5 1E-06 3.5E-11 87.9 14.0 75 304-383 20-97 (288)
401 3un9_A NLR family member X1; l 98.5 3.7E-09 1.3E-13 110.0 -4.5 112 72-183 127-255 (372)
402 3sb4_A Hypothetical leucine ri 98.4 1.7E-07 5.8E-12 95.7 6.1 100 72-173 227-327 (329)
403 3sb4_A Hypothetical leucine ri 98.4 2.4E-07 8.3E-12 94.6 6.6 45 71-116 101-145 (329)
404 3tdw_A Gentamicin resistance p 98.4 3.6E-06 1.2E-10 84.9 14.0 136 304-448 24-224 (306)
405 3ats_A Putative uncharacterize 98.3 2.6E-06 9E-11 87.8 11.3 144 305-448 26-252 (357)
406 1io0_A Tropomodulin; LRR prote 98.2 2.9E-08 9.9E-13 92.4 -4.9 111 70-180 35-164 (185)
407 3ovc_A Hygromycin-B 4-O-kinase 98.2 7.4E-06 2.5E-10 84.6 12.2 140 303-449 45-244 (362)
408 4gkh_A Aminoglycoside 3'-phosp 98.2 9.1E-06 3.1E-10 80.1 12.1 135 306-448 31-223 (272)
409 3ogk_B Coronatine-insensitive 98.0 4.8E-07 1.6E-11 100.0 -0.6 103 73-176 140-252 (592)
410 2olc_A MTR kinase, methylthior 98.0 3.9E-05 1.3E-09 80.3 12.2 76 304-381 35-120 (397)
411 1io0_A Tropomodulin; LRR prote 98.0 1.2E-07 4E-12 88.3 -6.5 114 85-198 26-163 (185)
412 2pyw_A Uncharacterized protein 97.9 3.9E-05 1.3E-09 80.9 10.2 77 417-496 231-312 (420)
413 3ogk_B Coronatine-insensitive 97.9 3.5E-06 1.2E-10 93.0 2.2 126 71-198 164-305 (592)
414 2q83_A YTAA protein; 2635576, 97.8 6.7E-05 2.3E-09 76.4 11.1 137 305-447 38-251 (346)
415 2p1m_B Transport inhibitor res 97.8 2.6E-07 8.9E-12 102.2 -7.9 39 142-180 455-494 (594)
416 2ra8_A Uncharacterized protein 97.7 1.6E-06 5.5E-11 89.3 -3.1 126 70-198 171-319 (362)
417 4fdw_A Leucine rich hypothetic 97.7 3.4E-05 1.2E-09 80.7 6.7 122 72-198 227-357 (401)
418 3jr1_A Putative fructosamine-3 97.7 0.00024 8.1E-09 71.4 12.4 135 304-444 41-232 (312)
419 3f7w_A Putative fructosamine-3 97.7 0.00031 1.1E-08 69.8 12.9 78 301-383 17-97 (288)
420 2p1m_B Transport inhibitor res 97.7 6.8E-07 2.3E-11 98.9 -7.7 89 91-180 428-519 (594)
421 4fdw_A Leucine rich hypothetic 97.5 9.8E-05 3.4E-09 77.2 6.8 121 71-196 203-333 (401)
422 2ppq_A HSK, HK, homoserine kin 97.4 0.00074 2.5E-08 68.1 11.3 155 289-447 7-216 (322)
423 2ra8_A Uncharacterized protein 97.4 9.2E-06 3.1E-10 83.7 -3.5 126 71-199 139-292 (362)
424 3dxq_A Choline/ethanolamine ki 97.2 0.0016 5.3E-08 65.1 11.5 128 304-448 23-202 (301)
425 3csv_A Aminoglycoside phosphot 97.2 0.0012 4.3E-08 66.8 10.3 33 417-449 182-218 (333)
426 3e4g_A ATP synthase subunit S, 97.2 2.1E-05 7.1E-10 71.6 -2.9 83 96-178 62-150 (176)
427 1zyl_A Hypothetical protein YI 97.1 0.003 1E-07 63.7 12.4 138 306-448 33-223 (328)
428 1nw1_A Choline kinase (49.2 KD 97.1 0.0019 6.6E-08 67.9 11.0 72 305-383 79-159 (429)
429 3feg_A Choline/ethanolamine ki 97.0 0.004 1.4E-07 64.2 12.0 138 305-448 56-254 (379)
430 3rfe_A Platelet glycoprotein I 97.0 0.00055 1.9E-08 59.1 4.2 56 75-132 12-68 (130)
431 3rfe_A Platelet glycoprotein I 96.9 0.001 3.6E-08 57.3 5.7 57 98-156 11-68 (130)
432 3e4g_A ATP synthase subunit S, 96.9 7.7E-05 2.6E-09 67.8 -1.9 86 71-156 61-153 (176)
433 3c5i_A Choline kinase; choline 96.9 0.0044 1.5E-07 63.8 11.0 73 305-383 39-121 (369)
434 2yle_A Protein spire homolog 1 96.8 0.005 1.7E-07 57.3 9.2 98 381-495 33-131 (229)
435 2qg7_A Ethanolamine kinase PV0 96.8 0.0075 2.6E-07 63.9 11.9 73 305-383 114-188 (458)
436 3i1a_A Spectinomycin phosphotr 96.4 0.027 9.1E-07 57.1 13.1 32 417-448 205-236 (339)
437 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0002 7E-09 66.2 -3.9 63 70-132 40-111 (197)
438 4gt6_A Cell surface protein; l 96.2 0.0056 1.9E-07 63.6 6.4 87 88-177 258-344 (394)
439 4h09_A Hypothetical leucine ri 96.2 0.0045 1.5E-07 63.8 5.5 103 72-177 218-320 (379)
440 4fs7_A Uncharacterized protein 95.9 0.0049 1.7E-07 64.0 4.2 87 88-177 290-376 (394)
441 4gt6_A Cell surface protein; l 95.7 0.0056 1.9E-07 63.6 3.9 104 72-179 266-369 (394)
442 3f2s_A CK, chetk-alpha, cholin 95.6 0.088 3E-06 54.4 12.1 139 305-447 58-279 (401)
443 4fs7_A Uncharacterized protein 95.5 0.0094 3.2E-07 61.8 4.7 110 72-188 254-363 (394)
444 2ks1_B Epidermal growth factor 95.4 0.016 5.5E-07 38.7 3.7 31 238-268 12-42 (44)
445 1pgv_A TMD-1, tropomodulin TMD 94.9 0.0016 5.3E-08 60.3 -3.0 91 88-178 34-137 (197)
446 2l2t_A Receptor tyrosine-prote 94.6 0.016 5.6E-07 38.6 2.1 31 238-268 11-41 (44)
447 3mes_A Choline kinase; malaria 94.4 0.21 7.2E-06 52.0 11.3 137 305-448 76-291 (424)
448 4h09_A Hypothetical leucine ri 94.4 0.076 2.6E-06 54.5 7.9 88 90-180 212-299 (379)
449 2jwa_A Receptor tyrosine-prote 93.7 0.036 1.2E-06 36.8 2.3 29 240-268 14-42 (44)
450 3g15_A CK, chetk-alpha, cholin 89.8 1.4 4.7E-05 45.5 10.4 30 419-448 245-280 (401)
451 4ann_A ESSB; membrane protein, 88.4 1.5 5E-05 40.7 8.2 116 354-501 43-158 (215)
452 2k9y_A Ephrin type-A receptor 86.5 0.26 8.7E-06 32.5 1.4 27 238-264 14-40 (41)
453 4ano_A ESSB; membrane protein, 84.6 2.8 9.6E-05 38.9 8.0 115 354-501 48-163 (219)
454 1iij_A ERBB-2 receptor protein 80.3 0.77 2.6E-05 28.8 1.6 23 243-265 13-35 (35)
455 3cxl_A N-chimerin; SH2, RHO-GA 79.6 0.21 7.3E-06 52.7 -1.8 62 303-367 146-215 (463)
456 2k1k_A Ephrin type-A receptor 77.5 1.3 4.5E-05 28.5 2.1 23 241-263 14-37 (38)
457 2l9u_A Receptor tyrosine-prote 64.6 3.1 0.00011 25.5 1.6 26 240-265 9-34 (40)
458 2l6w_A Beta-type platelet-deri 50.8 4.6 0.00016 25.7 0.0 14 252-265 23-36 (39)
459 2lz0_A Uncharacterized protein 43.0 36 0.0012 26.9 5.1 13 114-126 15-27 (100)
460 2l8s_A Integrin alpha-1; trans 40.8 17 0.00057 25.2 2.3 17 241-257 14-30 (54)
461 2l34_A TYRO protein tyrosine k 39.0 20 0.0007 22.1 2.3 24 240-263 9-32 (33)
462 2k1a_A Integrin alpha-IIB; sin 34.3 23 0.00077 23.2 2.0 17 241-257 15-31 (42)
463 2lz0_A Uncharacterized protein 33.3 48 0.0017 26.2 4.4 49 81-130 6-54 (100)
464 2ks1_B Epidermal growth factor 25.7 56 0.0019 21.6 2.8 31 236-266 13-43 (44)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.9e-55 Score=443.90 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=209.9
Q ss_pred CCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
+++..+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556788999999999999863 4678999999866555556689999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc
Q 007025 374 VYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 437 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 437 (621)
||||+++|+|.+++... ..++|..+..|+.|||+||.|||++ +|+||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 99999999999999532 3589999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHH
Q 007025 438 AVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDW 515 (621)
Q Consensus 438 ~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~ 515 (621)
+||+|||+++.....+.. ......||+.|||||++.++.|+.++|||||||++|||+| |+.||..... .+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~ 256 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV 256 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence 999999999876433322 2344569999999999999999999999999999999999 8999874322 111
Q ss_pred HHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 516 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 516 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
+..+.... ....+..++..+.+|+.+||+.||++||||+||+++|+.
T Consensus 257 ~~~i~~~~----------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 257 VEMIRNRQ----------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHcCC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22221111 112233445789999999999999999999999999985
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-54 Score=439.72 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=209.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCcee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (621)
++|.+.+.||+|+||+||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 46778899999999999999864 47889999997543 334567999999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccC-------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceE
Q 007025 373 LVYPYMSNGSVASRLKAK-------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAV 439 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~-------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~k 439 (621)
+||||+++|+|.++++.. ..++|..+..|+.|||+||.|||++ +|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 999999999999999643 3699999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCce-eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHH
Q 007025 440 VGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 517 (621)
Q Consensus 440 l~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 517 (621)
|+|||+|+.....+... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.+.
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~ 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIE 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHH
Confidence 99999998765433322 233469999999999999999999999999999999999 8999975322 11122
Q ss_pred HHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 518 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.+.... ....+..+++++.+|+.+||+.||++|||++||.+.|++
T Consensus 242 ~i~~~~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 242 CITQGR----------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCC----------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 222111 112233445789999999999999999999999999875
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.6e-54 Score=440.80 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=203.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCcee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (621)
++|.+.+.||+|+||+||+|+++ +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45667789999999999999864 47899999997543 334567999999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc
Q 007025 373 LVYPYMSNGSVASRLKAK---------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 437 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 437 (621)
+||||+++|+|.++++.. .+++|.++..|+.|||+||.|||++ +|+||||||+||||++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 999999999999998642 3699999999999999999999998 9999999999999999999
Q ss_pred eEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHH
Q 007025 438 AVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDW 515 (621)
Q Consensus 438 ~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~ 515 (621)
+||+|||+++.....+.. ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... +.
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-------~~ 269 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-------EA 269 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-------HH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-------HH
Confidence 999999999876543322 3345679999999999999999999999999999999999 89999743221 11
Q ss_pred HHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 516 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 516 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
+..+.... +...+..+++++.+|+.+||+.||++||||+||+++|+.
T Consensus 270 ~~~i~~g~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~ 316 (329)
T 4aoj_A 270 IDCITQGR----------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316 (329)
T ss_dssp HHHHHHTC----------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHcCC----------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 12221111 112233445789999999999999999999999999976
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-53 Score=432.68 Aligned_cols=257 Identities=27% Similarity=0.400 Sum_probs=202.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.+++.+.+.||+|+||+||+|++++ .||||+++.... ....+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4577888999999999999998763 599999975432 2334579999999999999999999998864 56899999
Q ss_pred eccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC-
Q 007025 377 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS- 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~- 454 (621)
|+++|+|.++++. ...+++..+..|+.|||+||.|||++ +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999975 45799999999999999999999998 999999999999999999999999999987654322
Q ss_pred ceeecccccccccchhhhcc---CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 455 HVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||...... ..+....... ...+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-------~~~~~~~~~~----~~~p 257 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-------DQIIFMVGRG----YASP 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHTT----CCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcC----CCCC
Confidence 23345679999999999964 46899999999999999999999999743221 1111111110 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.. ...+..+++.+.+++.+||+.||++||||.||+++|+.
T Consensus 258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11 11223345789999999999999999999999998864
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.7e-53 Score=434.17 Aligned_cols=250 Identities=21% Similarity=0.290 Sum_probs=203.0
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
++|++.+.||+|+||+||+|+.. +|+.||||+++..... .....+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999975 6899999999754322 234579999999999999999999999999999999999
Q ss_pred eccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++... ..+++..++.|+.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+..... .
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 99999999999643 4579999999999999999999999 9999999999999999999999999999865421 1
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.+..+..... +
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~~~------~--- 243 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIISGSF------P--- 243 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTCC------C---
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCCC------C---
Confidence 223446799999999999999999999999999999999999999975332 112222221110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+...+.++.+|+.+||+.||++|||++|++++
T Consensus 244 -~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 -PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1122234678999999999999999999999874
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6e-53 Score=436.61 Aligned_cols=265 Identities=26% Similarity=0.380 Sum_probs=216.9
Q ss_pred cChHHHHHHhcCCCcCCeeeeccccEEEEEEEcC------CcEEEEEEeccCcccchhhHHHHHHHHHhhccc-ccceee
Q 007025 289 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRL 361 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l 361 (621)
++.++++...++|++.+.||+|+||+||+|.+.. ++.||||+++..........|.+|+.++.++.| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445566667889999999999999999998652 357999999876555556679999999999965 899999
Q ss_pred EEEEecC-CceeEEEeeccCCChhhhhcc----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcc
Q 007025 362 IGFCMTT-TERLLVYPYMSNGSVASRLKA----------------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424 (621)
Q Consensus 362 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 424 (621)
+|+|.+. +..++||||+++|+|.++++. ...+++..+..++.|||+||.|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 568999999999999999964 23589999999999999999999999 999999
Q ss_pred cccCeEEecCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCccc
Q 007025 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEF 502 (621)
Q Consensus 425 lkp~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~ 502 (621)
|||+|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999976544433 3345679999999999999999999999999999999998 8999975
Q ss_pred CcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 503 GKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..... .....+... .+...+...++++.+++.+||+.||++|||+.||+++|+.
T Consensus 291 ~~~~~------~~~~~i~~g----------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 291 VKIDE------EFCRRLKEG----------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp CCCSH------HHHHHHHHT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHHH------HHHHHHHcC----------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 32211 111111111 1112233345789999999999999999999999999875
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.9e-52 Score=425.34 Aligned_cols=250 Identities=20% Similarity=0.273 Sum_probs=208.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
+.|+..+.||+|+||+||+|+.+ +|+.||||++..... .....+.+|+.+++.++|||||++++++.+.+..++||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 46888899999999999999976 699999999965432 3345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCcee
Q 007025 378 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 457 (621)
Q Consensus 378 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 457 (621)
+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.... ...
T Consensus 153 ~~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 227 (346)
T 4fih_A 153 LEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 227 (346)
T ss_dssp CTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred CCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence 9999999999764 699999999999999999999999 99999999999999999999999999998765432 234
Q ss_pred ecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCC
Q 007025 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 537 (621)
Q Consensus 458 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 537 (621)
....||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.+..+.... .+.+ ..
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~------~~~~--~~ 292 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNL------PPRL--KN 292 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSS------CCCC--SC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC------CCCC--Cc
Confidence 456799999999999999999999999999999999999999974322 11111111110 0011 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 538 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 538 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
....++++.+|+.+||+.||++|||++|+++|
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234678999999999999999999999864
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.8e-52 Score=427.93 Aligned_cols=250 Identities=22% Similarity=0.207 Sum_probs=205.8
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
+.|...+.||+|+||+||+|+++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..++||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45777889999999999999976 689999999975432 24799999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC-ceEEeecccceecCCCCCc-
Q 007025 378 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-EAVVGDFGLAKLLDHCDSH- 455 (621)
Q Consensus 378 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~Dfgla~~~~~~~~~- 455 (621)
+++|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99999999999888899999999999999999999999 999999999999999987 6999999999977543221
Q ss_pred ---eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 456 ---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 456 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
......||+.|||||++.+..|+.++|||||||++|||+||+.||...... .+.. .+......
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~---~i~~~~~~------- 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCL---KIASEPPP------- 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHH---HHHHSCCG-------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHH---HHHcCCCC-------
Confidence 123356999999999999999999999999999999999999999753321 1111 11111100
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....++..++.+.+++.+||+.||++|||+.|++++|..
T Consensus 275 -~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 275 -IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 011223344779999999999999999999999998864
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.9e-53 Score=426.95 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=210.1
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. .......+.+|++++++++|||||++++++.+.+..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46899999999999999999975 68999999996532 2233457899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC-
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS- 454 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~- 454 (621)
||+++|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999999888899999999999999999999999 999999999999999999999999999998754332
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+....
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-------~~~~~i~~~~----------- 250 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-------LIFAKIIKLE----------- 250 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC-----------
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCC-----------
Confidence 2345567999999999999999999999999999999999999999753321 1111221111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVV 567 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 567 (621)
..++...++++.+|+.+||+.||++|||++|++
T Consensus 251 ~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 011222346789999999999999999999874
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-52 Score=420.17 Aligned_cols=248 Identities=25% Similarity=0.391 Sum_probs=199.3
Q ss_pred CcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEec----CCceeEEE
Q 007025 302 SSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTERLLVY 375 (621)
Q Consensus 302 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 375 (621)
...+.||+|+||+||+|.+. ++..||+|.+...... .....|.+|+.++++++|||||++++++.. ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999976 5889999999754322 234579999999999999999999999865 34579999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec-CCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+++|+|.+++...+.+++..+..++.||+.||.|||++ .++|+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~--- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC---
Confidence 9999999999999888899999999999999999999998 12399999999999998 489999999999986432
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ......+..... . ..
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~------~~~~~~i~~~~~-~----~~-- 250 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVK-P----AS-- 250 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCC-C----GG--
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH------HHHHHHHHcCCC-C----CC--
Confidence 23345679999999999864 6999999999999999999999999643221 111112211110 0 01
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.+...++++.+++.+||+.||++|||++|+++|
T Consensus 251 --~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 251 --FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111123578999999999999999999999875
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.4e-52 Score=413.16 Aligned_cols=247 Identities=20% Similarity=0.310 Sum_probs=194.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ......+.+|+.++++++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999965 699999999975432 223457899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+ +|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..... .
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--N 166 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC--C
Confidence 999 679999999888999999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ......+....
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-------~~~~~~i~~~~----------- 228 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGV----------- 228 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-----------
Confidence 3345679999999999988776 5799999999999999999999974322 11222221111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..++...++++.+++.+||+.||++|||++|+++|
T Consensus 229 ~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 01122234678999999999999999999999874
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-51 Score=416.88 Aligned_cols=266 Identities=23% Similarity=0.324 Sum_probs=200.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC----ceeEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT----ERLLV 374 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv 374 (621)
++|.+.+.||+|+||+||+|+++ |+.||||+++.... ....+..|+..+.+++|||||+++|++.+.+ ..+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~--~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch--hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 45677899999999999999985 89999999964321 1223345666667889999999999998754 57899
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ-----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
|||+++|+|.++++.. +++|..+.+++.|+++||+|||++ .+++|+||||||+|||++.++++||+|||+++..
T Consensus 80 ~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999999865 599999999999999999999976 2568999999999999999999999999999877
Q ss_pred CCCCCce---eecccccccccchhhhccC------CCCCccchHhHHHHHHHHHhCCCCcccCccccc-------ccchH
Q 007025 450 DHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISGLRALEFGKTANQ-------KGAML 513 (621)
Q Consensus 450 ~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~-------~~~~~ 513 (621)
....... .....||+.|||||++.+. .++.++|||||||++|||+||+.|+........ .....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5543322 2345699999999999764 367899999999999999999888754322110 00011
Q ss_pred HHHHHHhhhcchhhhccccccCC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 514 DWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 514 ~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..+...... ...++.+... ........+.+|+.+||+.||++||||.||++.|+.
T Consensus 239 ~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 239 EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp HHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111111111 1111111111 123456789999999999999999999999999975
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=426.12 Aligned_cols=250 Identities=21% Similarity=0.277 Sum_probs=209.1
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
+.|+..+.||+|+||.||+|+.+ +|+.||||++..... .....+.+|+.+++.++|||||++++++.+.+..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56889999999999999999976 689999999975432 3345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCcee
Q 007025 378 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT 457 (621)
Q Consensus 378 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 457 (621)
+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+.+.... ...
T Consensus 230 ~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~ 304 (423)
T 4fie_A 230 LEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR 304 (423)
T ss_dssp CTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred CCCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence 9999999999754 599999999999999999999999 99999999999999999999999999998765432 233
Q ss_pred ecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCC
Q 007025 458 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 537 (621)
Q Consensus 458 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 537 (621)
....||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+.+..+.... .+.+. .
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~------~~~~~--~ 369 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNL------PPRLK--N 369 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSC------CCCCS--C
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC------CCCCc--c
Confidence 456799999999999999999999999999999999999999974322 11112221110 01111 1
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 538 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 538 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
....++++.+|+.+||+.||++|||+.|+++|
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234678999999999999999999999874
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5e-52 Score=419.60 Aligned_cols=249 Identities=24% Similarity=0.299 Sum_probs=200.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc----CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
++|++.+.||+|+||+||+|+.. .++.||||+++.... .....++.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999863 478999999975432 2233468899999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 374 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||||+++|+|.+++...+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999999888899999999999999999999999 99999999999999999999999999998654322
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.......||+.|||||++.+..|+.++|||||||++|||+||+.||...... +....+....
T Consensus 181 -~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-------~~~~~i~~~~---------- 242 (304)
T 3ubd_A 181 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-------ETMTMILKAK---------- 242 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC----------
T ss_pred -ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-------HHHHHHHcCC----------
Confidence 2234567999999999999999999999999999999999999999753321 1112211110
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVRM 569 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 569 (621)
..++...++++.+++.+||+.||++|||+ +|+++|
T Consensus 243 -~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 243 -LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 11222344778999999999999999984 566653
No 15
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.6e-50 Score=413.74 Aligned_cols=311 Identities=71% Similarity=1.124 Sum_probs=261.5
Q ss_pred hhhhhhcCCCcccChHHHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccc
Q 007025 277 RREEVCLGNLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 356 (621)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ 356 (621)
.......+.++.|++.+++...++|++.+.||+|+||.||+|..++++.||||+++..........+.+|+.+++.++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ 87 (326)
T 3uim_A 8 EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87 (326)
T ss_dssp -------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCT
T ss_pred cCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCC
Confidence 34445566788999999999999999999999999999999998889999999997665444455789999999999999
Q ss_pred cceeeEEEEecCCceeEEEeeccCCChhhhhccC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe
Q 007025 357 NLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 357 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl 432 (621)
||+++++++...+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+.++|+||||||+|||+
T Consensus 88 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167 (326)
T ss_dssp TBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred CccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence 9999999999999999999999999999999754 359999999999999999999999878899999999999999
Q ss_pred cCCCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccc-cccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTAN-QKGA 511 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~-~~~~ 511 (621)
+.++.+||+|||+++..............||+.|+|||++.+..++.++||||||+++|||+||+.||....... ....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSB
T ss_pred CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchh
Confidence 999999999999999876555555566679999999999999999999999999999999999999997433222 2334
Q ss_pred hHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCcchhhHhhHHHh
Q 007025 512 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLAEKWAASQKAEA 587 (621)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 587 (621)
..+|+...........+.+......+....+..+.+++.+||+.||++|||+.||+++|++....+.|+..++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~ 323 (326)
T 3uim_A 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 323 (326)
T ss_dssp HHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-------
T ss_pred HHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHHHh
Confidence 4577777777777778888888888889999999999999999999999999999999999988888776554443
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.5e-50 Score=405.69 Aligned_cols=249 Identities=20% Similarity=0.306 Sum_probs=189.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc-------
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE------- 370 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------- 370 (621)
++|++.+.||+|+||+||+|+.+ +|+.||||+++........+.+.+|+.++++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999975 6899999999765544445679999999999999999999999876543
Q ss_pred -----eeEEEeeccCCChhhhhccCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEee
Q 007025 371 -----RLLVYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 442 (621)
Q Consensus 371 -----~~lv~e~~~~g~L~~~l~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 442 (621)
.++||||+++|+|.+++..... .++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 6899999999999999986543 45677889999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCc-----------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccc
Q 007025 443 FGLAKLLDHCDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 511 (621)
Q Consensus 443 fgla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~ 511 (621)
||+|+........ ......||+.|||||++.+..|+.++|||||||++|||++ ||.....
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~------ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME------ 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH------
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH------
Confidence 9999876543221 1233569999999999999999999999999999999996 6642110
Q ss_pred hHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 512 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
....+..... ... +.......+.+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~---------~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTLTDVRN---------LKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHHT---------TCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhc---------CCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111111110 000 00112233567889999999999999999999874
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-48 Score=406.57 Aligned_cols=268 Identities=18% Similarity=0.251 Sum_probs=204.3
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEec------CCc
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT------TTE 370 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 370 (621)
++|++.+.||+|+||+||+|+.. +|+.||||+++..... .....+.+|+.+++.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 6999999999754332 234568899999999999999999998764 356
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 371 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
.++||||++ |+|.+++...+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 68999999888999999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC---CceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc---
Q 007025 451 HCD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK--- 523 (621)
Q Consensus 451 ~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 523 (621)
... ........||+.|+|||++.+. .++.++||||+||++|||+||+.||......+....+...........
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 321 2233456799999999998875 569999999999999999999999975433221111111000000000
Q ss_pred ----chhhh---ccccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 524 ----KLEML---VDKDLKN---NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 524 ----~~~~~---~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
..... ..+.... ...+..+.++.+|+.+||+.||++|||++|+++|-
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 00000 0000000 00011246789999999999999999999998753
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.4e-47 Score=394.03 Aligned_cols=199 Identities=25% Similarity=0.386 Sum_probs=171.5
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc----CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCce
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (621)
..++|++.+.||+|+||+||+|+.+ .++.||||.+.... ...++.+|++++..+ +||||+++++++.+.+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999864 46789999986543 344678999999988 699999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC-CceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-YEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~Dfgla~~~~ 450 (621)
++||||+++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 96 ~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 99999999999999984 589999999999999999999999 99999999999999876 799999999998654
Q ss_pred CCCC---------------------------ceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCccc
Q 007025 451 HCDS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEF 502 (621)
Q Consensus 451 ~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~ 502 (621)
.... .......||+.|+|||++.+. .|+.++||||+||++|||+||+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 3221 112334699999999999876 489999999999999999999999975
Q ss_pred Cc
Q 007025 503 GK 504 (621)
Q Consensus 503 ~~ 504 (621)
+.
T Consensus 250 ~~ 251 (361)
T 4f9c_A 250 AS 251 (361)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-45 Score=379.97 Aligned_cols=279 Identities=39% Similarity=0.678 Sum_probs=237.0
Q ss_pred cChHHHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC
Q 007025 289 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 368 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 368 (621)
+.+.++...+++|+..+.||+|+||.||+|.+++++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 44445556788999999999999999999998889999999986543 33456789999999999999999999999999
Q ss_pred CceeEEEeeccCCChhhhhccC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecc
Q 007025 369 TERLLVYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFG 444 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfg 444 (621)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999999754 2589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCC-CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 445 LAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 445 la~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
+++...... ........||+.|+|||++.+..++.++||||||+++|||+||+.||...... .......|........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNG 263 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccc
Confidence 998654322 22233445899999999999999999999999999999999999999754432 2233445555555555
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.+....++..........+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 6666777777777788889999999999999999999999999999985
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.6e-46 Score=405.86 Aligned_cols=253 Identities=24% Similarity=0.262 Sum_probs=203.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHH---HHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTE---VEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e---~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
-++|++.++||+|+||+||+|+.+ +|+.||||++++... ......+.+| +.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999976 689999999964321 1122233344 5566677899999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
|+||||++||+|.+++...+.+++..+..++.||+.||.|||++ +||||||||+||||+.+|.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999999999888899999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
.. ....+||+.|||||++.. ..|+.++|||||||++|||++|+.||........ ..........
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~----~~i~~~i~~~-------- 409 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLTM-------- 409 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH----HHHHHHHHHC--------
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhhcCC--------
Confidence 32 334679999999999975 4799999999999999999999999975332111 1111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhh
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRMLE 571 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~ 571 (621)
...++...++++.+|+.+||+.||++|++ ++||++|--
T Consensus 410 ---~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf 452 (689)
T 3v5w_A 410 ---AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452 (689)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred ---CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence 01122334477899999999999999998 678776443
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.5e-45 Score=406.44 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=208.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
++|++.+.||+|+||+||+|..+ +|+.||+|+++.... .....+.+|+.+++.++|||||++++++.+....++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57999999999999999999976 689999999965432 2345788999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC--CceEEeecccceecCCCCC
Q 007025 378 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY--YEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 378 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~--~~~kl~Dfgla~~~~~~~~ 454 (621)
+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999999999864 45799999999999999999999999 99999999999999854 89999999999987643
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......||+.|||||++.+..|+.++||||+||++|||++|+.||...... +....+..... .......
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-------~~~~~i~~~~~---~~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-------ETLRNVKSCDW---NMDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTCC---CCCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------HHHHHHHhCCC---CCCcccc
Confidence 3334567999999999999999999999999999999999999999753321 11112111110 0111111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...++++.+|+.+||+.||++|||+.|+++|
T Consensus 381 ----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 ----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1234678999999999999999999999985
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-44 Score=375.54 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=202.1
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||+||+|... +|+.||||++...........+.+|+.+++.++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 3578999999999999999999964 789999999976554444557899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||++.........
T Consensus 88 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 88 EYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 9999999999998878899999999999999999999999 9999999999999999999999999999865543333
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+....
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~----------- 226 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMRGK----------- 226 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-----------
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-----------
Confidence 3445679999999999988775 8999999999999999999999975322 11111111110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+...+.++.+++.+||+.||++|||++|++++
T Consensus 227 ~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 01122234678899999999999999999999974
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.6e-42 Score=354.70 Aligned_cols=280 Identities=40% Similarity=0.675 Sum_probs=230.3
Q ss_pred CCcccChHHHHHHhcCCCcC------CeeeeccccEEEEEEEcCCcEEEEEEeccCcc---cchhhHHHHHHHHHhhccc
Q 007025 285 NLKRFHFKELQSATSNFSSK------NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVH 355 (621)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~------~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~H 355 (621)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++..... ......+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45778999999999999877 8999999999999987 588999999865432 2234578999999999999
Q ss_pred ccceeeEEEEecCCceeEEEeeccCCChhhhhc---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe
Q 007025 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLK---AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 356 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl 432 (621)
|||+++++++...+..++||||+++|+|.+++. ...++++..+..++.|++.||.|||+. +|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999986 345699999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA 511 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~ 511 (621)
+.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--- 242 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--- 242 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB---
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH---
Confidence 99999999999999876543322 2334569999999998864 588999999999999999999999986443222
Q ss_pred hHHHHHHHhh-hcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 512 MLDWVKKIHQ-EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 512 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
...+...... ...+...+++.+ ...+...++.+.+++.+||+.||++|||+++++++|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 2223222222 222344444433 345677788999999999999999999999999999863
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=7.6e-44 Score=374.23 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=210.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc--------CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecC
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 368 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 368 (621)
.++|.+.+.||+|+||.||+|.+. ++..||||+++..........+.+|+.++..+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 367888999999999999999863 35679999997665444556799999999999 899999999999999
Q ss_pred CceeEEEeeccCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe
Q 007025 369 TERLLVYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl 432 (621)
+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999753 2489999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCccccccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 510 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~ 510 (621)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 99999999999999876543322 2233457889999999999999999999999999999999 99998753221
Q ss_pred chHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 511 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.+. ...... .....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 313 ~~~---~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 313 ELF---KLLKEG----------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp GHH---HHHHTT----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHH---HHHhcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 111111 1111223344679999999999999999999999999986
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.3e-44 Score=366.09 Aligned_cols=258 Identities=28% Similarity=0.393 Sum_probs=203.4
Q ss_pred HHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 295 QSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 295 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
....++|++.+.||+|+||+||+|.. +|+.||||++...... .....+.+|+.++++++||||+++++++......++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 34457889999999999999999987 4889999999755432 233478899999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcccccCeEEecCCCceEEeeccccee
Q 007025 374 VYPYMSNGSVASRLKAKPS---LDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
||||+++|+|.+++..... +++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999999986543 99999999999999999999998 8 99999999999999999999999999975
Q ss_pred cCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 449 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 449 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
.... ........||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .........
T Consensus 189 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~------ 254 (309)
T 3p86_A 189 KAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFK------ 254 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHS------
T ss_pred cccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhc------
Confidence 4432 12233456999999999999999999999999999999999999999743221 111111000
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
......+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 255 ---~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 255 ---CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp ---CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011112233346799999999999999999999999998753
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.7e-43 Score=357.83 Aligned_cols=252 Identities=19% Similarity=0.277 Sum_probs=208.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46799999999999999999996 4689999999865433 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
|+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 98 ~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 99999999999765 589999999999999999999999 999999999999999999999999999987654332 2
Q ss_pred eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCC
Q 007025 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 536 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 536 (621)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ............ ...
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~--------~~~ 237 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTP--------ELQ 237 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCSC--------CCS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCC--------CCC
Confidence 34456999999999999999999999999999999999999999743221 111111111100 001
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 537 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 537 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.+...+..+.+++.+||+.||++|||++|++++-
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 1222346789999999999999999999998753
No 27
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-43 Score=359.68 Aligned_cols=271 Identities=17% Similarity=0.210 Sum_probs=216.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC--ceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv 374 (621)
.++|.+.+.||+|+||+||+|... +++.||||+++..........+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357888999999999999999976 489999999976554445567889999999999999999999988765 67999
Q ss_pred EeeccCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe----cCCCceEEeecccce
Q 007025 375 YPYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVGDFGLAK 447 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~Dfgla~ 447 (621)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999997543 399999999999999999999999 99999999999999 788889999999998
Q ss_pred ecCCCCCceeecccccccccchhhhc--------cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHH
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
...... ......||..|+|||++. +..++.++|||||||++|||+||+.||............. ...
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~---~~~ 239 (319)
T 4euu_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM---YKI 239 (319)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHH---HHH
T ss_pred ecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHH---HHH
Confidence 765432 223456999999999986 4678999999999999999999999997543322222222 221
Q ss_pred hhhcc---hhhhc-----------cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCc
Q 007025 520 HQEKK---LEMLV-----------DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 576 (621)
Q Consensus 520 ~~~~~---~~~~~-----------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 576 (621)
..... ...+. +-.............+.+++.+||+.||++|||++|++++..++...
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 11111 00000 00111244577888999999999999999999999999999876543
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=366.16 Aligned_cols=256 Identities=26% Similarity=0.390 Sum_probs=209.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc----CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
.++|.+.+.||+|+||.||+|.+. .+..||||+++..........+.+|+.++..++||||+++++++...+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888899999999999999974 3556999999765544555679999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999644 5799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc--eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 453 DSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 453 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .........
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------~~~~~~~~~------- 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-------DVISSVEEG------- 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-------HHHHHHHTT-------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcC-------
Confidence 322 2223346788999999999999999999999999999999 99998643221 111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.....+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 271 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 271 ---YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11112223447799999999999999999999999999863
No 29
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=362.94 Aligned_cols=256 Identities=27% Similarity=0.411 Sum_probs=208.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
++|.+.+.||+|+||+||+|... +++.||+|.+.... ......+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 56888999999999999999975 58999999885432 33455799999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 378 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 378 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999986 56799999999999999999999999 99999999999999999999999999998764332211
Q ss_pred -------------eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 457 -------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 457 -------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
.....||+.|+|||++.+..++.++||||||+++|||++|..|+.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~---------- 235 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN---------- 235 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC----------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh----------
Confidence 114569999999999999999999999999999999999999987533322111100
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.....+.. .+...++.+.+++.+||+.||++|||+.++++.|+..
T Consensus 236 -~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 236 -VRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp -HHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -hhcccccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00000111 1112235689999999999999999999999998863
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.8e-44 Score=367.24 Aligned_cols=249 Identities=21% Similarity=0.304 Sum_probs=208.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..+|.+.+.||+|+||.||+|.+ .+|+.||||++..... .....++.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788999999999999999997 4799999999965432 223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC--
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC--
Confidence 9999999999998878899999999999999999999999 99999999999999999999999999998665332
Q ss_pred eeecccccccccchhhhccCCCC-CccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||++.+..++ .++|||||||++|||+||+.||...... .......... .
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~i~~~~---------~- 231 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-------ELRERVLRGK---------Y- 231 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC---------C-
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC---------C-
Confidence 23445699999999999988765 7999999999999999999999753321 1111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+...+.++.+++.+||+.||.+|||++|++++
T Consensus 232 -~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 -RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1122234678999999999999999999999875
No 31
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.9e-43 Score=352.93 Aligned_cols=255 Identities=25% Similarity=0.396 Sum_probs=212.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
.++|++.+.||+|+||.||+|..+++..||+|+++.... ...++.+|+.++.+++||||+++++++......++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 467888999999999999999999888999999975432 345689999999999999999999999999999999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 378 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 378 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999754 4599999999999999999999999 99999999999999999999999999998766544333
Q ss_pred eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
.....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~----------~~ 224 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGH----------RL 224 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTC----------CC
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCC----------CC
Confidence 444557788999999999899999999999999999999 99998743321 1111111110 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 574 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 574 (621)
..+...++.+.+++.+||+.||++|||+.|++++|+...
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 111122367899999999999999999999999998753
No 32
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-43 Score=376.98 Aligned_cols=266 Identities=18% Similarity=0.200 Sum_probs=214.2
Q ss_pred ChHHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEe
Q 007025 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366 (621)
Q Consensus 290 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 366 (621)
.+.++....++|++.++||+|+||+||+|+.+ +++.||+|+++.... ......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34556667789999999999999999999987 478999999964321 122334889999999999999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeeccc
Q 007025 367 TTTERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445 (621)
Q Consensus 367 ~~~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgl 445 (621)
+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999986 56899999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccchhhhc-----cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHh
Q 007025 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520 (621)
Q Consensus 446 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 520 (621)
++..............||+.|+|||++. .+.++.++|||||||++|||++|+.||........ ...+.
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-------~~~i~ 294 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-------YGKIM 294 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHHHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-------HHhhh
Confidence 9876654444444567999999999997 45689999999999999999999999975432211 11111
Q ss_pred hhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhh
Q 007025 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSL--RPKMSEVVRMLE 571 (621)
Q Consensus 521 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~ 571 (621)
.... ....+.. ....++++.+++.+|+..+|++ ||+++|+++|--
T Consensus 295 ~~~~--~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 295 NHKE--RFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp THHH--HCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred hccc--cccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 1000 0000111 1112367899999999998888 999999987543
No 33
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.1e-44 Score=373.09 Aligned_cols=265 Identities=26% Similarity=0.380 Sum_probs=214.0
Q ss_pred cChHHHHHHhcCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceee
Q 007025 289 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRL 361 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l 361 (621)
+...+++...++|.+.+.||+|+||.||+|.+. +++.||||+++..........+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 344555666789999999999999999999842 46789999997665545556799999999999 79999999
Q ss_pred EEEEecCCc-eeEEEeeccCCChhhhhccCCC------------------------------------------------
Q 007025 362 IGFCMTTTE-RLLVYPYMSNGSVASRLKAKPS------------------------------------------------ 392 (621)
Q Consensus 362 ~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------ 392 (621)
++++...+. .++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 8999999999999999975432
Q ss_pred ------------------CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 393 ------------------LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 393 ------------------l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 89999999999999999999999 999999999999999999999999999986643332
Q ss_pred -ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 455 -HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 455 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
.......||+.|+|||++.+..++.++|||||||++|||+| |+.||....... .. .......
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~---~~~~~~~---------- 312 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EF---CRRLKEG---------- 312 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HH---HHHHHHT----------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH---HH---HHHHHcC----------
Confidence 23344568999999999999999999999999999999998 999997533211 01 1111111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.....+...++++.+++.+||+.||++|||+.|++++|+.
T Consensus 313 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 0111122234679999999999999999999999999986
No 34
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-43 Score=364.04 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=205.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||+||+|... +++.||||++...........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367899999999999999999976 7899999999755444444578899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC-c
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-H 455 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~-~ 455 (621)
|+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999999888899999999999999999999999 999999999999999999999999999986543221 2
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+. ..... ..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~----~~~~~---~~---- 229 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK----EKKTY---LN---- 229 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHHH----TTCTT---ST----
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHh----ccccc---CC----
Confidence 2234569999999999988775 7789999999999999999999975332111 011111 00000 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.....+..+.+++.+||+.||++|||+.|++++-
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 0112236788999999999999999999998753
No 35
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.7e-43 Score=371.86 Aligned_cols=256 Identities=28% Similarity=0.403 Sum_probs=199.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc----CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
.++|++.+.||+|+||.||+|+.. ++..||||+++..........|.+|+.++.+++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357899999999999999999865 5778999999765444455679999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
||||+++|+|.+++... ..+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999764 4799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcee--ecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 453 DSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 453 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
..... ....++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.......
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-------~~~~~i~~-------- 265 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDE-------- 265 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-------HHHHHHHT--------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHc--------
Confidence 22211 22235778999999999999999999999999999998 99998643211 11111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
......+...+..+.+++.+||+.||++||++.+|++.|+..
T Consensus 266 --~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 266 --GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp --TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 111111223347799999999999999999999999999763
No 36
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-43 Score=354.43 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=210.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
.++|++.+.||+|+||.||+|...+++.||+|+++.... ...++.+|+.++.+++||||+++++++.+....++||||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 357888999999999999999998899999999975432 345789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 378 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 378 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 999999999964 45689999999999999999999999 99999999999999999999999999998654332222
Q ss_pred eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ......... ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-------~~~~~~~~~----------~~~ 226 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTG----------FRL 226 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTT----------CCC
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHhcC----------ccC
Confidence 333457788999999999999999999999999999999 99998743221 111111111 011
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..+...+..+.+++.+||+.||++|||++|++++|+.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 1122234679999999999999999999999999976
No 37
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.3e-44 Score=374.74 Aligned_cols=255 Identities=26% Similarity=0.391 Sum_probs=209.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|.+.+.||+|+||.||+|.+. +++.||||.++..........|.+|+.++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888999999999999999986 6899999999765443444578899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 377 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 377 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999754 4699999999999999999999999 9999999999999999999999999999865432111
Q ss_pred ee-ecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 456 VT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 456 ~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.. ....++..|+|||.+..+.++.++|||||||++|||+| |..||...... ......... .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~----------~ 332 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKG----------G 332 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTT----------C
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC----------C
Confidence 11 11235778999999999999999999999999999998 99998743221 111111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....+...+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 371 (377)
T 3cbl_A 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371 (377)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 111222334678999999999999999999999999976
No 38
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.6e-43 Score=356.01 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=206.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc--hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|++.+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.++.+++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357889999999999999999965 68899999986543322 335789999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++|+|.+++...+++++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999999998888899999999999999999999999 999999999999999999999999999986654333
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... ......... .. ...
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-------~~~~~~~~~-~~-----~~~ 233 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-------IAIKHIQDS-VP-----NVT 233 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-------HHHHHHSSC-CC-----CHH
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHhhcc-CC-----Ccc
Confidence 33445569999999999999999999999999999999999999997533211 111111110 00 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcC
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRP-KMSEVVRMLEGD 573 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~ 573 (621)
.......+..+.+++.+|++.||++|| +++++.+.|+..
T Consensus 234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 111122346799999999999999999 899999988864
No 39
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.2e-42 Score=361.14 Aligned_cols=254 Identities=22% Similarity=0.249 Sum_probs=209.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-----hhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
.++|++.+.||+|+||.||++..+ +|+.||+|+++...... ....+.+|+.++..++||||+++++++......
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999976 68999999997543321 235789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC----ceEEeecccce
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 447 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~Dfgla~ 447 (621)
++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999999888899999999999999999999999 999999999999998776 79999999998
Q ss_pred ecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhh
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... .....+.... .
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-------~~~~~i~~~~---~ 235 (361)
T 2yab_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANITAVS---Y 235 (361)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTC---C
T ss_pred EcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcC---C
Confidence 765432 233456999999999999989999999999999999999999999753221 1111111110 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
-.++.... ..++.+.+++.+||..||++|||+.|++++-
T Consensus 236 ~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 236 DFDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp CCCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred CCCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00111111 1236789999999999999999999998753
No 40
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.1e-42 Score=353.36 Aligned_cols=263 Identities=19% Similarity=0.251 Sum_probs=213.2
Q ss_pred cccChHHHHHHhcC----------CCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhccc
Q 007025 287 KRFHFKELQSATSN----------FSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 355 (621)
Q Consensus 287 ~~~~~~~~~~~~~~----------~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H 355 (621)
..++++++..+++. |+..+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 35677777777654 566679999999999999976 69999999996543 2344578899999999999
Q ss_pred ccceeeEEEEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC
Q 007025 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY 435 (621)
Q Consensus 356 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~ 435 (621)
|||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence 99999999999999999999999999999988754 699999999999999999999999 99999999999999999
Q ss_pred CceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHH
Q 007025 436 YEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW 515 (621)
Q Consensus 436 ~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~ 515 (621)
+.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-------~~ 249 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-------QA 249 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HH
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HH
Confidence 9999999999987654322 233456999999999999999999999999999999999999999743221 11
Q ss_pred HHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 516 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 516 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
........ .+... .....+..+.+++.+||+.||++|||+.|++++-
T Consensus 250 ~~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 250 MKRLRDSP------PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp HHHHHHSS------CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHHHhcCC------CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 11111110 01100 0112236789999999999999999999999753
No 41
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.8e-43 Score=361.27 Aligned_cols=251 Identities=23% Similarity=0.249 Sum_probs=209.0
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||+|..+ +|+.||+|+++... .......+.+|+.++..++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999976 68999999997542 2223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++...+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~ 160 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC-CC
Confidence 9999999999998878899999999999999999999999 9999999999999999999999999999854322 22
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... . .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~---------~--~ 222 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------RLFELILME---------E--I 222 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHC---------C--C
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-------HHHHHHHcC---------C--C
Confidence 334566999999999999999999999999999999999999999743221 111111111 0 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhh
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLE 571 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~ 571 (621)
.++...+.++.+++.+||+.||++|| +++|+++|--
T Consensus 223 ~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 12223347789999999999999999 8999987643
No 42
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.9e-43 Score=362.90 Aligned_cols=270 Identities=27% Similarity=0.330 Sum_probs=205.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc----eeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE----RLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----~~l 373 (621)
.++|++.+.||+|+||+||+|... ++.||||+++... .....+..|+.++.+++||||+++++++..... .++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 467889999999999999999876 7899999996432 223356678888999999999999999987543 699
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CCceEEcccccCeEEecCCCceEEeecccc
Q 007025 374 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-------DPKIIHRDVKAANILLDEYYEAVVGDFGLA 446 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla 446 (621)
||||+++|+|.+++... .+++..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 100 v~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999999999765 4999999999999999999999752 348999999999999999999999999999
Q ss_pred eecCCCCCc-eeecccccccccchhhhccC-----CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHh
Q 007025 447 KLLDHCDSH-VTTAVRGTVGHIAPEYLSTG-----QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520 (621)
Q Consensus 447 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 520 (621)
+........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||......... ..........
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~~~~~~~~~ 257 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML-PFEEEIGQHP 257 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC-TTHHHHCSSC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc-chhhhhccCC
Confidence 876543322 22335699999999999863 4566889999999999999999999754332111 0100000000
Q ss_pred hhcch-hhhccccccCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 521 QEKKL-EMLVDKDLKNN-----YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 521 ~~~~~-~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..... ..+......+. .....+..+.+++.+||+.||++|||+.||++.|+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00000 00111111111 122455779999999999999999999999999986
No 43
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.1e-43 Score=357.88 Aligned_cols=256 Identities=27% Similarity=0.379 Sum_probs=211.3
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 370 (621)
..++|.+.+.||+|+||.||+|... +++.||||+++..........+.+|+.+++.++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3567889999999999999999862 3578999999765544455678999999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCC------------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccc
Q 007025 371 RLLVYPYMSNGSVASRLKAKP------------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVK 426 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~------------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 426 (621)
.++||||+++|+|.+++.... .+++..+..++.|+++||.|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 999999999999999997543 389999999999999999999999 99999999
Q ss_pred cCeEEecCCCceEEeecccceecCCCCCce-eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCc
Q 007025 427 AANILLDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGK 504 (621)
Q Consensus 427 p~NILl~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~ 504 (621)
|+||+++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999998765433322 223457889999999999999999999999999999999 999987433
Q ss_pred ccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 505 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.. .... ..... .....+...++.+.+++.+||+.||++|||+.|++++|+.
T Consensus 258 ~~----~~~~---~~~~~----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 258 PE----RLFN---LLKTG----------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp GG----GHHH---HHHTT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH----HHHH---HhhcC----------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 21 1111 11111 0111122334779999999999999999999999999986
No 44
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.3e-43 Score=354.56 Aligned_cols=254 Identities=23% Similarity=0.366 Sum_probs=208.2
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
..++|++.+.||+|+||.||+|.++++..||+|+++.... ...++.+|++++..++||||+++++++......++|||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 3467888999999999999999999888999999975432 34578999999999999999999999999999999999
Q ss_pred eccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 377 YMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 377 ~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 9999999999976 45799999999999999999999999 9999999999999999999999999999866433222
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ......... ..
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~----------~~ 239 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------ETAEHIAQG----------LR 239 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTT----------CC
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-------HHHHHHhcc----------cC
Confidence 2233447788999999999999999999999999999998 99998743321 111111111 01
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
...+...++.+.+++.+||+.||++|||++|++++|++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 11122223679999999999999999999999999976
No 45
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.5e-43 Score=357.99 Aligned_cols=268 Identities=21% Similarity=0.261 Sum_probs=202.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||+||+|...+|+.||+|+++..... .....+.+|+.+++.++||||+++++++......++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 34678999999999999999999988999999999754322 23356889999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+++ +|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 99985 77777764 45699999999999999999999999 99999999999999999999999999998765322
Q ss_pred ceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcc-----hh--
Q 007025 455 HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK-----LE-- 526 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-- 526 (621)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+............ ..
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 22334568999999999876 56899999999999999999999999754332211111110000000000 00
Q ss_pred -----hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 527 -----MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 527 -----~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
............+....++.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000000011223678999999999999999999999975
No 46
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.9e-43 Score=352.42 Aligned_cols=255 Identities=22% Similarity=0.359 Sum_probs=197.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcC----CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
.++|++.+.||+|+||.||+|.... +..||+|.++..........+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998742 45799999876544444567899999999999999999999984 567899
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999754 4799999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.........+++.|+|||.+....++.++||||||+++|||++ |..||....... .. ..+....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~----~~---~~i~~~~-------- 234 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VI---GRIENGE-------- 234 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HH---HHHHTTC--------
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH----HH---HHHHcCC--------
Confidence 3333334457889999999999999999999999999999997 999987533211 11 1111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 235 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 235 --RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0111223347789999999999999999999999999863
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=367.47 Aligned_cols=256 Identities=29% Similarity=0.392 Sum_probs=211.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc--------CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecC
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 368 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 368 (621)
.++|.+.+.||+|+||.||+|... ++..||||+++.........++.+|++++.++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999999853 23579999997665544556789999999999 899999999999999
Q ss_pred CceeEEEeeccCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe
Q 007025 369 TERLLVYPYMSNGSVASRLKAK----------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~----------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl 432 (621)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999754 3599999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCC-ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCccccccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 510 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~ 510 (621)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |..||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999987654332 22233457889999999999999999999999999999999 9999864322
Q ss_pred chHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 511 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.+......... ....+...+.++.+++.+||+.||++|||++||+++|+..
T Consensus 300 --~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 300 --EELFKLLKEGH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp --HHHHHHHHTTC----------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHHcCC----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111 1111222346799999999999999999999999999863
No 48
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-42 Score=361.48 Aligned_cols=259 Identities=26% Similarity=0.381 Sum_probs=209.1
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecC
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTT 368 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 368 (621)
...++|.+.+.||+|+||.||+|... ++..||||+++..........+.+|+.++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 34578899999999999999999962 45689999997654444556799999999999 899999999999999
Q ss_pred CceeEEEeeccCCChhhhhccCC-----------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEccc
Q 007025 369 TERLLVYPYMSNGSVASRLKAKP-----------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDV 425 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 425 (621)
+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 99999999999999999997542 379999999999999999999999 9999999
Q ss_pred ccCeEEecCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccC
Q 007025 426 KAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFG 503 (621)
Q Consensus 426 kp~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~ 503 (621)
||+|||++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866443332 2334557889999999999999999999999999999998 99999753
Q ss_pred cccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 504 KTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.... ... ..... ......+...++.+.+++.+||+.||.+|||+.|++++|+..
T Consensus 279 ~~~~---~~~----~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 279 PVDA---NFY----KLIQN---------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp CCSH---HHH----HHHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcHH---HHH----HHHhc---------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 3211 011 11111 111111222347799999999999999999999999999864
No 49
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.5e-43 Score=360.61 Aligned_cols=254 Identities=23% Similarity=0.394 Sum_probs=200.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCc----EEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGT----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
++|++.+.||+|+||+||+|.+. +++ +||+|.++..........+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888999999999999999964 343 468888875554455668999999999999999999999998754 789
Q ss_pred EEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
|+||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999999999975 46799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 453 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 453 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
... ......+|..|+|||++.+..++.++|||||||++|||+| |+.||....... +... ..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~---~~---------- 233 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSI---LE---------- 233 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHH---HH----------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH----HHHH---HH----------
Confidence 322 2233457889999999999999999999999999999999 999997533211 1111 11
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.......+...+..+.+++.+||+.||++||++.|++++|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111112223346799999999999999999999999999763
No 50
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=358.37 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=208.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-----hhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
.++|.+.+.||+|+||.||+|... +|+.||+|+++...... ....+.+|+.++..++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356888999999999999999976 58999999997543221 245789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC----ceEEeecccce
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 447 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~Dfgla~ 447 (621)
++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999999998888899999999999999999999999 999999999999999877 89999999998
Q ss_pred ecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhh
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...........
T Consensus 167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~--- 234 (326)
T 2y0a_A 167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANVSAVNY--- 234 (326)
T ss_dssp ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHHTCC---
T ss_pred ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------HHHHHHHhcCC---
Confidence 765332 223456999999999999999999999999999999999999999643221 11111111000
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
........ ..+..+.+++.+||+.||++|||+.|++++-
T Consensus 235 ~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 235 EFEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp CCCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred CcCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 00000111 1236789999999999999999999999864
No 51
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-43 Score=362.49 Aligned_cols=257 Identities=26% Similarity=0.414 Sum_probs=211.4
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 370 (621)
..++|.+.+.||+|+||.||+|... +++.||||+++..........+.+|+.++..++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999975 3478999999765544445679999999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccC------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccc
Q 007025 371 RLLVYPYMSNGSVASRLKAK------------------------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVK 426 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~------------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 426 (621)
.++||||+++|+|.+++... ..+++..++.++.||++||.|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999998753 5699999999999999999999999 99999999
Q ss_pred cCeEEecCCCceEEeecccceecCCCCC-ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCc
Q 007025 427 AANILLDEYYEAVVGDFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGK 504 (621)
Q Consensus 427 p~NILl~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~ 504 (621)
|+|||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999976543221 12234458899999999999999999999999999999999 999987432
Q ss_pred ccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 505 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
. ........... . ...+...+..+.+++.+||+.||++|||+.+++++|+..
T Consensus 282 ~-------~~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 282 H-------EEVIYYVRDGN-I---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp H-------HHHHHHHHTTC-C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred h-------HHHHHHHhCCC-c---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 2 11111111111 0 111223346799999999999999999999999999875
No 52
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.4e-42 Score=355.85 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=211.3
Q ss_pred HhcCCCcCCeeeeccccEEEEEEE------cCCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCC
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTT 369 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 369 (621)
..++|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+|+.++.++ +||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788899999999999999985 246789999997655444556799999999999 8999999999999999
Q ss_pred ceeEEEeeccCCChhhhhccCC------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEE
Q 007025 370 ERLLVYPYMSNGSVASRLKAKP------------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANIL 431 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIL 431 (621)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 9999999999999999997543 489999999999999999999999 9999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccc
Q 007025 432 LDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQK 509 (621)
Q Consensus 432 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~ 509 (621)
++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 255 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 255 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence 999999999999999876544332 2234457889999999999999999999999999999999 999987533211
Q ss_pred cchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..... .. .. .....+...+..+.+++.+||+.||.+|||+.|++++|+.
T Consensus 256 -~~~~~---~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 256 -KFYKM---IK-EG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp -HHHHH---HH-HT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHHH---hc-cC---------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 01111 11 10 0111122234679999999999999999999999999985
No 53
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.9e-43 Score=369.98 Aligned_cols=265 Identities=21% Similarity=0.231 Sum_probs=213.0
Q ss_pred HHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecC
Q 007025 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 368 (621)
Q Consensus 292 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 368 (621)
.++....++|++.+.||+|+||+||+|+.+ +++.||+|+++.... ......+.+|+.++..++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 445556788999999999999999999976 588999999964221 12233588999999999999999999999999
Q ss_pred CceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 369 TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
...++||||+++|+|.+++... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 9999999999999999999764 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeecccccccccchhhhccCC----CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcc
Q 007025 449 LDHCDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524 (621)
Q Consensus 449 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
.............||+.|+|||++.+.. ++.++|||||||++|||+||+.||....... ....+.....
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-------~~~~i~~~~~ 290 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------TYSKIMNHKN 290 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------HHHHHHTHHH
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-------HHHHHHhccc
Confidence 6644333344667999999999998765 7899999999999999999999997533211 1111111100
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhcCC
Q 007025 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSL--RPKMSEVVRMLEGDG 574 (621)
Q Consensus 525 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~~~~ 574 (621)
. +..+. ....+.++.+++.+||+.+|++ ||+++||++|---..
T Consensus 291 ~--~~~p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 291 S--LTFPD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp H--CCCCT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred c--ccCCC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 0 00000 0112367899999999999998 999999998765443
No 54
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.4e-42 Score=350.86 Aligned_cols=265 Identities=20% Similarity=0.240 Sum_probs=203.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
++|++.+.||+|+||+||+|... +++.||||+++...... ....+.+|+.++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999976 58999999997554332 34578899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
|++++.+..+....+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 157 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RC 157 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-SC
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-cc
Confidence 998644444444567899999999999999999999999 99999999999999999999999999998765322 22
Q ss_pred eecccccccccchhhhccCC-CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh--hcc---hhhhcc
Q 007025 457 TTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ--EKK---LEMLVD 530 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~d 530 (621)
.....||+.|+|||++.+.. ++.++|||||||++|||+||..|+........ ........... ... .....+
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHHhCCCChhhhhhhccccc
Confidence 33456899999999998766 79999999999999999999998754332111 01111111100 000 000000
Q ss_pred ---------ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 531 ---------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 531 ---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........+..+..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011112344678999999999999999999999875
No 55
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.5e-42 Score=356.78 Aligned_cols=267 Identities=22% Similarity=0.331 Sum_probs=191.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|... +|+.||+|+++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999965 6899999999765544445678899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 377 YMSNGSVASRLKAK------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 377 ~~~~g~L~~~l~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
|++ |+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5999888632 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcc--hhh
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK--LEM 527 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 527 (621)
.... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||...........+............ ...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 3222 22344689999999999764 6899999999999999999999999754332111111110000000000 000
Q ss_pred h--ccccc------------cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 528 L--VDKDL------------KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 528 ~--~d~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
. ..+.. ........+.++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 00000 000011123678999999999999999999999864
No 56
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.9e-42 Score=363.66 Aligned_cols=258 Identities=22% Similarity=0.270 Sum_probs=205.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc--chhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 373 (621)
.++|++.++||+|+||+||+|+.+ +++.||+|++++.... .....+..|..++.++ +||||+++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467889999999999999999976 5789999999754322 2234578899998877 89999999999999999999
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 374 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||||+++|+|..++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.... .
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-P 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-T
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeeccc-C
Confidence 999999999999998878899999999999999999999999 999999999999999999999999999985322 2
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccc-cchHHHHHHHhhhcchhhhcccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK-GAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
........||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....... .
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~ 278 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q 278 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--------C
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--------c
Confidence 22344567999999999999999999999999999999999999999753322111 11111111111111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM------SEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 569 (621)
..++...+.++.+++.+||+.||++||++ .|+++|
T Consensus 279 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 279 --IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred --cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 11223344778999999999999999996 566554
No 57
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-42 Score=352.60 Aligned_cols=263 Identities=20% Similarity=0.294 Sum_probs=201.3
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
++|++.+.||+|+||+||+|...+++.||+|+++..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999988999999999654322 2235688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 378 MSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 378 ~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
+++ +|.+++.. .+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 986 89888875 36799999999999999999999999 99999999999999999999999999998654322 12
Q ss_pred eecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhh---cc--hhh--h
Q 007025 457 TTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE---KK--LEM--L 528 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~--~ 528 (621)
.....||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ........... .. ... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhcccc
Confidence 2334689999999999764 589999999999999999999999975432111 11111110000 00 000 0
Q ss_pred ccccc-------cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 529 VDKDL-------KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 529 ~d~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.++.. ........++++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 001112234678999999999999999999999865
No 58
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=364.84 Aligned_cols=251 Identities=26% Similarity=0.336 Sum_probs=203.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 373 (621)
.++|++.+.||+|+||+||+|+.+ +++.||||+++... .......+.+|..++..+ +||||+++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999976 58999999997532 122344678899999887 69999999999999999999
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 374 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~- 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN- 177 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC-
Confidence 999999999999998888899999999999999999999999 9999999999999999999999999999854322
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....+... .
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~---------~- 240 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-------DLFEAILND---------E- 240 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHC---------C-
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-------HHHHHHHcC---------C-
Confidence 22334567999999999999989999999999999999999999999754321 111111111 0
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHHh
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKM------SEVVRML 570 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~L 570 (621)
..++...+..+.+++.+||+.||++||++ .|+++|-
T Consensus 241 -~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 241 -VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred -CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 11222234678999999999999999998 7777643
No 59
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=367.88 Aligned_cols=255 Identities=27% Similarity=0.386 Sum_probs=207.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
.++|.+.+.||+|+||+||+|.+. +++.||||+++..........+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356888999999999999999953 46789999997655555566789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC---ceEEe
Q 007025 372 LLVYPYMSNGSVASRLKAK-------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVG 441 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~-------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~ 441 (621)
++||||+++|+|.+++... ..+++..++.++.||+.||.|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999999999743 3589999999999999999999999 999999999999999554 59999
Q ss_pred ecccceecCCCC-CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHH
Q 007025 442 DFGLAKLLDHCD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 442 Dfgla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||+| |..||...... ......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-------~~~~~i 299 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-------EVLEFV 299 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHH
Confidence 999997542211 122334558899999999999999999999999999999998 99998743221 111111
Q ss_pred hhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 520 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.... ....+...+..+.+++.+||+.||++|||+.+|+++|+.
T Consensus 300 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 300 TSGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HcCC----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111 111122234678999999999999999999999999986
No 60
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.3e-43 Score=377.42 Aligned_cols=254 Identities=23% Similarity=0.393 Sum_probs=209.7
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
..++|.+.+.||+|+||.||+|.++++..||||+++... .....|.+|+.++++++||||+++++++. .+..++|||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 456788899999999999999999888999999997543 23567999999999999999999999986 567899999
Q ss_pred eccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999999753 3689999999999999999999999 999999999999999999999999999987643221
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.......++..|+|||++....++.++|||||||++|||+| |+.||...... +....+....
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-------~~~~~i~~~~---------- 402 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-------EVIRALERGY---------- 402 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHHHHTC----------
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCC----------
Confidence 22223346789999999999999999999999999999999 99999743221 1111111111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....+...++.+.+++.+||+.||++|||+++|++.|++.
T Consensus 403 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 403 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 1111223447799999999999999999999999999875
No 61
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-42 Score=377.27 Aligned_cols=256 Identities=25% Similarity=0.407 Sum_probs=212.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcC-CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|.++. +..||||.++.... ....|.+|+.++++++||||+++++++......++|||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4568888999999999999999874 88999999975432 35579999999999999999999999999999999999
Q ss_pred eccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 9999999999975 34689999999999999999999999 999999999999999999999999999987654332
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.......++..|+|||++....++.++|||||||++|||+| |+.||...... .+... +. ...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~---~~----------~~~ 436 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYEL---LE----------KDY 436 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHH---HH----------TTC
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHH---HH----------cCC
Confidence 22333446789999999999999999999999999999999 88998753321 11111 11 111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCC
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 575 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 575 (621)
....+...++.+.+++.+||+.||++|||+.++++.|+....
T Consensus 437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 112233344789999999999999999999999999987643
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-42 Score=355.73 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=207.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|.+.+.||+|+||.||+|... +++.||+|.++... .....+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 467889999999999999999976 58899999986432 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC--CCceEEeecccceecCCCC
Q 007025 377 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 377 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~--~~~~kl~Dfgla~~~~~~~ 453 (621)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999765 4799999999999999999999999 9999999999999987 7899999999998775432
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
......||+.|+|||++.+..++.++|||||||++|+|++|..||...... .....+..... ..+...
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~---~~~~~~ 226 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-------QIIENIMNAEY---TFDEEA 226 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCC---CCCHHH
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-------HHHHHHHcCCC---CCChhh
Confidence 334456999999999999888999999999999999999999999753221 11111111110 000001
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.. ..+.++.+++.+||+.||++|||+.|++++-
T Consensus 227 ~~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 227 FK----EISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred hc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 11 1236789999999999999999999999743
No 63
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-42 Score=354.47 Aligned_cols=247 Identities=27% Similarity=0.342 Sum_probs=207.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||++... +|+.||+|+++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57888999999999999999976 689999999965321 223446788999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 9999999999999888899999999999999999999999 9999999999999999999999999999875432
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... ..
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~i~~~---------~~-- 220 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-------KTYEKILNA---------EL-- 220 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHC---------CC--
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhC---------CC--
Confidence 23456999999999999999999999999999999999999999753221 111111111 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHh
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRML 570 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 570 (621)
.++...+.++.+++.+|++.||++|| +++|+++|-
T Consensus 221 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 221 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 11222346789999999999999999 889988653
No 64
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.4e-42 Score=355.85 Aligned_cols=250 Identities=20% Similarity=0.299 Sum_probs=199.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC-------
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------- 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------- 369 (621)
.++|++.+.||+|+||.||+|+.+ +|+.||||+++..........+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999986 789999999976555555668999999999999999999999986543
Q ss_pred --------------------------------------------------ceeEEEeeccCCChhhhhccCC---CCCHH
Q 007025 370 --------------------------------------------------ERLLVYPYMSNGSVASRLKAKP---SLDWA 396 (621)
Q Consensus 370 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~---~l~~~ 396 (621)
..++||||+++|+|.+++.... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 2789999999999999998653 35677
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC-----------ceeeccccccc
Q 007025 397 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-----------HVTTAVRGTVG 465 (621)
Q Consensus 397 ~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~gt~~ 465 (621)
.+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 7899999999999999999 999999999999999999999999999987654321 11233469999
Q ss_pred ccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHH
Q 007025 466 HIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEM 545 (621)
Q Consensus 466 y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 545 (621)
|+|||.+.+..++.++|||||||++|||++|..|+.... ......... ..+.........+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~---------~~~~~~~~~----------~~~~~~~~~~~~~ 302 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV---------RIITDVRNL----------KFPLLFTQKYPQE 302 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH---------HHHHHHHTT----------CCCHHHHHHCHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH---------HHHHHhhcc----------CCCcccccCChhH
Confidence 999999999999999999999999999999876653110 001111000 0001112334667
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 007025 546 VQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 546 ~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.+++.+||+.||++|||+.|++++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999999975
No 65
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.2e-42 Score=349.63 Aligned_cols=260 Identities=27% Similarity=0.380 Sum_probs=200.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhh--cccccceeeEEEEecC----Cce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTT----TER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~~ 371 (621)
.++|++.+.||+|+||+||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46899999999999999999988 5899999998643 23455667776665 7899999999987543 457
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCceEEcccccCeEEecCCCceEEeec
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYYEAVVGDF 443 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 443 (621)
++||||+++|+|.++++.. .+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+||
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEehhhccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 8999999999999999654 6999999999999999999999 76 9999999999999999999999999
Q ss_pred ccceecCCCCCce---eecccccccccchhhhccC------CCCCccchHhHHHHHHHHHhC----------CCCcccCc
Q 007025 444 GLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISG----------LRALEFGK 504 (621)
Q Consensus 444 gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvil~elltg----------~~p~~~~~ 504 (621)
|+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998765433322 2234699999999999876 445799999999999999999 77775432
Q ss_pred ccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 505 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.... .................+. ........+..+.+++.+||+.||++|||+.||++.|+.
T Consensus 238 ~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 238 PNDP--SFEDMRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp CSSC--CHHHHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred CCCc--chhhhhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 2111 1111111111111000000 011233466889999999999999999999999999975
No 66
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.5e-42 Score=360.36 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=207.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
..++|++.+.||+|+||.||+|..+ +++.||+|+++..... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999976 6899999999754322 2345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC---CceEEeecccceecCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFGLAKLLDH 451 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~Dfgla~~~~~ 451 (621)
|||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||++.....
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999999998888899999999999999999999999 99999999999999864 4599999999987653
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+.... .. ...
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-------~~~~~i~~~~-~~--~~~ 251 (362)
T 2bdw_A 184 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKAGA-YD--YPS 251 (362)
T ss_dssp CC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC-CC--CCT
T ss_pred Cc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCC-CC--CCc
Confidence 22 223456999999999999999999999999999999999999999743221 1111111110 00 000
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
... ...+.++.+++.+||+.||++|||+.|++++
T Consensus 252 ~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 252 PEW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp TGG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001 1223678999999999999999999999865
No 67
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=350.48 Aligned_cols=250 Identities=25% Similarity=0.341 Sum_probs=197.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-------------------------chhhHHHHHHHHHhh
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-------------------------GGEIQFQTEVEMISL 352 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~~ 352 (621)
++|++.+.||+|+||.||+|... +++.||||++...... .....+.+|+.+++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57889999999999999999975 6889999999654321 112468899999999
Q ss_pred cccccceeeEEEEec--CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeE
Q 007025 353 AVHRNLLRLIGFCMT--TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANI 430 (621)
Q Consensus 353 l~H~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 430 (621)
++||||+++++++.. ....++||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 999999999999986 5678999999999999887654 4699999999999999999999999 999999999999
Q ss_pred EecCCCceEEeecccceecCCCCCceeecccccccccchhhhccCC---CCCccchHhHHHHHHHHHhCCCCcccCcccc
Q 007025 431 LLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISGLRALEFGKTAN 507 (621)
Q Consensus 431 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvil~elltg~~p~~~~~~~~ 507 (621)
|++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-- 245 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI-- 245 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred EECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence 999999999999999987654322 234456999999999997765 37789999999999999999999974321
Q ss_pred cccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 508 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+....... .. .... ....++.+.+++.+||+.||++|||+.|++++
T Consensus 246 -----~~~~~~~~~~-~~----~~~~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 -----MCLHSKIKSQ-AL----EFPD----QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -----HHHHHHHHHC-CC----CCCS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -----HHHHHHHhcc-cC----CCCC----ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111111111 00 0000 11223678999999999999999999999864
No 68
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=367.98 Aligned_cols=255 Identities=19% Similarity=0.243 Sum_probs=207.5
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
..++|++.+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567999999999999999999865 6899999999754422 2344688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec---CCCceEEeecccceecCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~Dfgla~~~~~ 451 (621)
|||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999999888899999999999999999999999 999999999999998 467899999999987654
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+..... +
T Consensus 166 ~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~~~~~-----~- 231 (444)
T 3soa_A 166 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-------RLYQQIKAGAY-----D- 231 (444)
T ss_dssp TC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHTCC-----C-
T ss_pred CC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHhCCC-----C-
Confidence 32 2233456999999999999999999999999999999999999999643221 11111111100 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.........++++.+++.+||+.||++|||+.|++++
T Consensus 232 -~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 -FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000111234678999999999999999999999875
No 69
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1e-42 Score=360.44 Aligned_cols=261 Identities=25% Similarity=0.366 Sum_probs=211.4
Q ss_pred HHHHhcCCCcCCeeeeccccEEEEEEEcC------CcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEe
Q 007025 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCM 366 (621)
Q Consensus 294 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~ 366 (621)
++...++|.+.+.||+|+||.||+|.... ...||+|.++..........+.+|+.++..+ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 33446789999999999999999999652 2479999997665444556799999999999 8999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe
Q 007025 367 TTTERLLVYPYMSNGSVASRLKA--------------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 367 ~~~~~~lv~e~~~~g~L~~~l~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl 432 (621)
..+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999863 34689999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCccccccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 510 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~ 510 (621)
+.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |..||.......
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 274 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--- 274 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---
Confidence 99999999999999865433322 2234457889999999999999999999999999999999 888987432211
Q ss_pred chHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 511 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.....+. .. .....+...+..+.+++.+||+.||.+|||+.|++++|+..
T Consensus 275 ~~~~~~~----~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 275 KFYKLVK----DG---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHHHH----HT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHh----cC---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 0111111 10 01111222246789999999999999999999999999863
No 70
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.3e-42 Score=361.15 Aligned_cols=251 Identities=24% Similarity=0.296 Sum_probs=206.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||++... +++.||+|++.... .......+.+|+.++..++||||+++++++...+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57888999999999999999976 58899999986432 1223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--T 169 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--C
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--C
Confidence 9999999999999888899999999999999999999999 9999999999999999999999999999876532 2
Q ss_pred eeecccccccccchhhhcc---CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 456 VTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ...........
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~----~~~~~~~~~~~---------- 235 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS----SKEIVHTFETT---------- 235 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC----HHHHHHHHHHC----------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc----HHHHHHHHhhc----------
Confidence 3345679999999999974 458999999999999999999999997533211 11111111100
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPK-MSEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 569 (621)
...++...+..+.+++.+||+.||++||+ ++++.++
T Consensus 236 -~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 236 -VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 01122233477999999999999999998 7777653
No 71
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1e-41 Score=348.93 Aligned_cols=257 Identities=28% Similarity=0.414 Sum_probs=200.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|.+.+.||+|+||.||+|... ..+|+|+++..... .....+.+|+.++.+++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467889999999999999999865 36899988754332 23457899999999999999999999875 456899999
Q ss_pred eccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC-CC
Q 007025 377 YMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC-DS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~-~~ 454 (621)
|+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 999999999997 456799999999999999999999999 9999999999999999999999999999865432 12
Q ss_pred ceeecccccccccchhhhc---cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 455 HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.......||+.|+|||++. +..++.++|||||||++|||+||+.||........ .. ....... ..+
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~---~~---~~~~~~~-----~~~ 257 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---II---FMVGRGY-----ASP 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HH---HHHHHTC-----CCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH---HH---HHHhcCC-----CCc
Confidence 2233456999999999986 56788999999999999999999999974332110 11 1111110 011
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.. ......+++.+.+++.+||+.+|++||++.|++++|+.
T Consensus 258 ~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp CS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred ch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 10 11112234679999999999999999999999999875
No 72
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-42 Score=348.81 Aligned_cols=254 Identities=28% Similarity=0.446 Sum_probs=209.2
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
...++|++.+.||+|+||.||+|..+++..||||.++.... ....+.+|+.++..++||||+++++++. .+..++||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 86 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc--cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence 34567889999999999999999998888999999975432 3457899999999999999999999986 45689999
Q ss_pred eeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 376 PYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999999997543 699999999999999999999999 99999999999999999999999999998776443
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +.........
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-------~~~~~~~~~~--------- 227 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-------EVIQNLERGY--------- 227 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTC---------
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-------HHHHHHhccc---------
Confidence 333334457889999999998899999999999999999999 89998643221 1111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....+...++.+.+++.+|++.||++|||+.++++.|++
T Consensus 228 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 228 -RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 111122234679999999999999999999999999986
No 73
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-43 Score=369.81 Aligned_cols=265 Identities=22% Similarity=0.224 Sum_probs=211.4
Q ss_pred ChHHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEe
Q 007025 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCM 366 (621)
Q Consensus 290 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 366 (621)
.+++.....++|++.+.||+|+||+||+++.+ +|+.||||++++... ......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555566789999999999999999999975 689999999964321 122335889999999999999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeeccc
Q 007025 367 TTTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGL 445 (621)
Q Consensus 367 ~~~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgl 445 (621)
+.+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999999764 4799999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccchhhhc-------cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHH
Q 007025 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518 (621)
Q Consensus 446 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 518 (621)
++..............||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-------~~~ 281 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-------YGK 281 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-------HHH
Confidence 9877654433344567999999999997 35689999999999999999999999975432111 111
Q ss_pred HhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHHhh
Q 007025 519 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR---PKMSEVVRMLE 571 (621)
Q Consensus 519 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~L~ 571 (621)
+..... ....+. .....+.++.+++.+||. +|++| |+++|+++|--
T Consensus 282 i~~~~~--~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 282 IVHYKE--HLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp HHTHHH--HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred HHhccc--CcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 111000 000011 112234679999999999 99998 68999987543
No 74
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-42 Score=359.51 Aligned_cols=247 Identities=20% Similarity=0.285 Sum_probs=204.7
Q ss_pred cCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.+|.+.+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999997 468999999986432 1122346889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+ +|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++...... .
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--N 162 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--B
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC--c
Confidence 999 689999998778899999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........... +... .
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~----------------i~~~--~ 224 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK----------------VNSC--V 224 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC----------------CCSS--C
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH----------------HHcC--C
Confidence 2234569999999999988776 7899999999999999999999975432211110 0000 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+...+..+.+++.+||+.||.+|||++|++++
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 11122334678999999999999999999999864
No 75
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5e-42 Score=344.41 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=195.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc---chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||+|.+. ++.||||+++..... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999976 889999998754322 22356889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC--------CCceEEeecccce
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--------YYEAVVGDFGLAK 447 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~--------~~~~kl~Dfgla~ 447 (621)
||+++++|.+++.. ..+++..+..++.|++.||.|||+....+|+||||||+|||++. ++.+||+|||+++
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 86 EFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp ECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 99999999998864 46999999999999999999999981112999999999999986 7789999999998
Q ss_pred ecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhh
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 165 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~------- 227 (271)
T 3dtc_A 165 EWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------AVAYGVA------- 227 (271)
T ss_dssp --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHH-------
T ss_pred cccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHhhh-------
Confidence 654322 22346999999999999999999999999999999999999999743221 0011111
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
........+...++.+.+++.+||+.||++|||+.|++++|+.
T Consensus 228 --~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 228 --MNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp --TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred --cCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1111111223334779999999999999999999999999975
No 76
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.1e-42 Score=347.07 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=204.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcC----CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
.++|.+.+.||+|+||.||+|.+.+ +..||+|.++..........+.+|+.+++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998653 346999999766544556679999999999999999999999765 45789
Q ss_pred EEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999975 34699999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.........+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... ... .......
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~~---~~~~~~~------- 232 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIG---VLEKGDR------- 232 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HHH---HHHHTCC-------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HHH---HHhcCCC-------
Confidence 3333344557889999999999999999999999999999998 999997433211 111 1111110
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
...+...++.+.+++.+||+.||++|||+.|++++|+..
T Consensus 233 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 233 ---LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 011122346799999999999999999999999999863
No 77
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.8e-42 Score=355.07 Aligned_cols=257 Identities=27% Similarity=0.410 Sum_probs=210.3
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc--------CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEec
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMT 367 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 367 (621)
..++|.+.+.||+|+||.||+|... ++..||||+++..........+.+|+.++.++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3468899999999999999999863 46789999997655444556789999999999 89999999999999
Q ss_pred CCceeEEEeeccCCChhhhhccCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEE
Q 007025 368 TTERLLVYPYMSNGSVASRLKAKP----------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANIL 431 (621)
Q Consensus 368 ~~~~~lv~e~~~~g~L~~~l~~~~----------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIL 431 (621)
.+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 999999999999999999997543 389999999999999999999999 9999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCce-eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccc
Q 007025 432 LDEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQK 509 (621)
Q Consensus 432 l~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~ 509 (621)
++.++.+||+|||+++......... .....+|+.|+|||++.+..++.++||||||+++|||+| |+.||......
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--- 266 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 266 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH---
Confidence 9999999999999998765433222 223457889999999999899999999999999999999 99998643221
Q ss_pred cchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.......... ....+...+..+.+++.+||+.||.+|||+.|++++|+..
T Consensus 267 ----~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 267 ----ELFKLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp ----HHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHHhcCC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111111111 1111222346799999999999999999999999999863
No 78
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-42 Score=372.03 Aligned_cols=255 Identities=27% Similarity=0.377 Sum_probs=204.8
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
..++|.+.+.||+|+||.||+|.++++..||||+++.... ....|.+|+.++++++||||+++++++.. +..++|||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3456888899999999999999998888899999975432 34579999999999999999999999876 67899999
Q ss_pred eccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999974 35699999999999999999999999 999999999999999999999999999987654333
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.......++..|+|||.+..+.++.++|||||||++|||+| |+.||...... +....+... .
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-------~~~~~i~~~----------~ 398 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVLDQVERG----------Y 398 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTT----------C
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC----------C
Confidence 33334457889999999999999999999999999999999 89998643221 111111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 574 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 574 (621)
+...+...++.+.+++.+||+.||++|||++++++.|++..
T Consensus 399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 11122334578999999999999999999999999998753
No 79
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.1e-42 Score=350.57 Aligned_cols=263 Identities=24% Similarity=0.385 Sum_probs=203.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-----cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC--Cc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~ 370 (621)
.++|++.+.||+|+||+||+|.+ .+++.||||+++... ......+.+|+.++.+++||||+++++++... ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 35788899999999999999984 258899999997543 23345789999999999999999999998654 55
Q ss_pred eeEEEeeccCCChhhhhccCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 371 RLLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 899999999999999997653 599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhh-----
Q 007025 450 DHCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE----- 522 (621)
Q Consensus 450 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 522 (621)
...... ......++..|+|||.+.+..++.++||||||+++|||+||..|+...... +.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~ 236 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--------FMRMIGNDKQGQM 236 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--------HHHHHCTTCCTHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH--------HHhhhcCccccch
Confidence 543221 223344778899999999999999999999999999999999988642211 00000000
Q ss_pred --cchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 523 --KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 523 --~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
...............+...++++.+++.+||+.||++|||+.|+++.|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 00001111111112233345789999999999999999999999999975
No 80
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.7e-42 Score=354.87 Aligned_cols=257 Identities=22% Similarity=0.271 Sum_probs=205.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc--hhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (621)
++|++.+.||+|+||.||+|+.+ +++.||+|+++...... ....+.+|..++.++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999976 58899999997653322 234578899999887 899999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-G 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-T
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC-C
Confidence 99999999999998877899999999999999999999999 9999999999999999999999999999854322 2
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccc-cchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK-GAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....... .
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--------~- 235 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------Q- 235 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--------C-
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--------C-
Confidence 2334567999999999999999999999999999999999999999753221111 01111111111111 0
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKM------SEVVRM 569 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 569 (621)
..++...+.++.+++.+||+.||++||++ .|+++|
T Consensus 236 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 236 -IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11222334678999999999999999996 566654
No 81
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.5e-42 Score=357.60 Aligned_cols=248 Identities=21% Similarity=0.236 Sum_probs=208.0
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||+++.. +|+.||+|+++... .......+.+|+.++..++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999976 68999999996532 1223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence 9999999999998877899999999999999999999999 9999999999999999999999999999876432
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... .
T Consensus 195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~~-----------~ 255 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-------QIYEKIVSGK-----------V 255 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC-----------C
T ss_pred -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-------HHHHHHHcCC-----------C
Confidence 23456999999999999999999999999999999999999999743221 1111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhh
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRMLE 571 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~ 571 (621)
.++...+..+.+++.+||+.||++||+ ++|+++|--
T Consensus 256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 112223467899999999999999998 888876543
No 82
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.5e-42 Score=354.51 Aligned_cols=266 Identities=26% Similarity=0.384 Sum_probs=214.3
Q ss_pred cChHHHHHHhcCCCcCCeeeeccccEEEEEEE------cCCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceee
Q 007025 289 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRL 361 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l 361 (621)
+...++....++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 33445555678899999999999999999984 246899999997665444556789999999999 79999999
Q ss_pred EEEEecCC-ceeEEEeeccCCChhhhhccCCC----------------CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcc
Q 007025 362 IGFCMTTT-ERLLVYPYMSNGSVASRLKAKPS----------------LDWATRKRIALGAARGLLYLHEQCDPKIIHRD 424 (621)
Q Consensus 362 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 424 (621)
++++...+ ..++||||+++|+|.+++..... +++..+..++.|++.||.|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99988755 48999999999999999976543 89999999999999999999999 999999
Q ss_pred cccCeEEecCCCceEEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCccc
Q 007025 425 VKAANILLDEYYEAVVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEF 502 (621)
Q Consensus 425 lkp~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~ 502 (621)
|||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876543332 2334558899999999999999999999999999999998 9999864
Q ss_pred CcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 503 GKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
..... .......... ....+...+..+.+++.+||+.||.+|||+.|++++|+..
T Consensus 254 ~~~~~------~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VKIDE------EFCRRLKEGT----------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCCSH------HHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhH------HHHHHhccCc----------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 32211 1111111111 0111122346789999999999999999999999999863
No 83
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.6e-42 Score=351.00 Aligned_cols=255 Identities=21% Similarity=0.279 Sum_probs=197.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccc--hhhHHHHHHHHHhhcccccceeeEEEEecCCce---
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER--- 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~--- 371 (621)
.++|++.+.||+|+||.||+|.. .+++.||||+++...... ....+.+|+.++.+++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999996 478999999997643322 234688999999999999999999998766543
Q ss_pred -eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 -LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 -~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++||||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 99999999999999998878899999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCc--eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 451 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 451 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
..... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~-- 238 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIP-- 238 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCC--
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCC--
Confidence 43222 223356899999999999999999999999999999999999999753321 1111111111000
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.... ....+.++.+++.+||+.||++||++.+++++
T Consensus 239 -~~~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 239 -PSAR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp -HHHH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred -cccc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 0000 11123678999999999999999988777653
No 84
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-42 Score=345.28 Aligned_cols=253 Identities=28% Similarity=0.433 Sum_probs=209.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
.++|++.+.||+|+||.||+|...+++.||+|+++.... ....+.+|+.++..++||||+++++++...+..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 357888899999999999999998889999999976443 235789999999999999999999999999999999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 378 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 378 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 9999999999754 5689999999999999999999999 99999999999999999999999999998654322222
Q ss_pred eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .......... ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~i~~~~----------~~ 224 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTGF----------RL 224 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTTC----------CC
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-------HHHHHHhcCC----------cC
Confidence 233457789999999999999999999999999999999 89998743221 1111111110 01
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..+...+..+.+++.+||+.||++|||+.+++++|+.
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1122234678999999999999999999999999976
No 85
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=358.15 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=200.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhccc--ccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVH--RNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv 374 (621)
.++|++.+.||+|+||.||++...+++.||||++...... .....+.+|+.++..++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4568899999999999999999988999999999754332 233578899999999976 9999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|| +.+|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 99 56789999999888999999999999999999999999 999999999999997 67899999999987654322
Q ss_pred c-eeecccccccccchhhhcc-----------CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhh
Q 007025 455 H-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522 (621)
Q Consensus 455 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 522 (621)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~------ 230 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKL------ 230 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHH------
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HHHHH------
Confidence 2 2334569999999999975 6788999999999999999999999964211 01111
Q ss_pred cchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 523 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
..+.++.....++......+.+++.+||+.||++|||+.|++++.
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 231 ---HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ---HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---HHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111222222222222346789999999999999999999999753
No 86
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.1e-42 Score=354.56 Aligned_cols=266 Identities=25% Similarity=0.353 Sum_probs=208.7
Q ss_pred CCcCCeeeeccccEEEEEEEc-----CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC--CceeE
Q 007025 301 FSSKNLVGKGGFGNVYKGYLQ-----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TERLL 373 (621)
Q Consensus 301 ~~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~l 373 (621)
|++.+.||+|+||+||++.++ +++.||||+++..........+.+|+.++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999998753 58899999998665444556799999999999999999999999874 56789
Q ss_pred EEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 374 VYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||||+++|+|.+++.... +++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 999999999999998654 99999999999999999999999 99999999999999999999999999998776543
Q ss_pred Cc--eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 454 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 454 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.. ......+|..|+|||.+.+..++.++||||||+++|||+||+.||......... ...+................
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE--LIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH--HHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh--hhcccccchhHHHHHHHHhc
Confidence 32 223345888999999999999999999999999999999999998743211000 00000000000011111112
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
......+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 22222233445789999999999999999999999999986
No 87
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.6e-42 Score=368.41 Aligned_cols=247 Identities=28% Similarity=0.388 Sum_probs=204.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC-ceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT-ERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|.++ ++.||||+++... ....|.+|+.++++++||||+++++++.... ..++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 467888899999999999999986 7899999997543 3457899999999999999999999987765 7899999
Q ss_pred eccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++...+ .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 999999999998543 479999999999999999999999 9999999999999999999999999999854321
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... ... ..+... .
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~---~~i~~~----------~ 403 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVV---PRVEKG----------Y 403 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THH---HHHHTT----------C
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHH---HHHHcC----------C
Confidence 122357889999999999999999999999999999998 99999743221 111 111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
+...+..++..+.+++.+||+.||++|||+.++++.|+.
T Consensus 404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111223345789999999999999999999999999875
No 88
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.7e-42 Score=359.79 Aligned_cols=252 Identities=25% Similarity=0.327 Sum_probs=206.6
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhc-ccccceeeEEEEecCCce
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 371 (621)
...++|.+.+.||+|+||.||+|+.+ +|+.||||+++.... ......+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 44578999999999999999999976 589999999975421 22344677888888876 899999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
++||||+++|+|.+++...+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999998877899999999999999999999999 999999999999999999999999999985432
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+....
T Consensus 171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~~-------- 234 (345)
T 1xjd_A 171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-------ELFHSIRMDN-------- 234 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC--------
T ss_pred CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHhCC--------
Confidence 22 2234567999999999999999999999999999999999999999743221 1111111110
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS-EVVRM 569 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~ 569 (621)
..++...+.++.+++.+||+.||++||++. ++++|
T Consensus 235 ---~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 235 ---PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ---CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 112222346789999999999999999997 66643
No 89
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2e-42 Score=357.19 Aligned_cols=254 Identities=23% Similarity=0.388 Sum_probs=203.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcE----EEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTV----VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
++|++.+.||+|+||+||+|.+. +++. ||+|.+...........+.+|+.++..++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56888899999999999999965 3443 88888865544444456788999999999999999999986 567899
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999764 5799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 453 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 453 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
... ......||..|+|||.+.+..++.++||||||+++|||+| |+.||...... .... ......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~---~~~~~~------- 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPD---LLEKGE------- 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHH---HHHTTC-------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHH---HHHcCC-------
Confidence 322 2344568889999999999999999999999999999999 99999753321 1111 111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 235 ---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 235 ---RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274 (325)
T ss_dssp ---BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred ---CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111112235688999999999999999999999999874
No 90
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.9e-42 Score=353.11 Aligned_cols=261 Identities=23% Similarity=0.352 Sum_probs=206.6
Q ss_pred cCCCcCCeeeeccccEEEEEEE-----cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC--Cce
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TER 371 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 371 (621)
+.|++.+.||+|+||.||+|.+ .+++.||||+++..........+.+|+.++..++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 368899999997655445556799999999999999999999999876 668
Q ss_pred eEEEeeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 99999999999999995 456799999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCc--eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCccc--------ccccchHHHHHHHh
Q 007025 451 HCDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTA--------NQKGAMLDWVKKIH 520 (621)
Q Consensus 451 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~ 520 (621)
..... ......||..|+|||.+.+..++.++||||||+++|||+||+.|+...... .............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL- 256 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH-
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH-
Confidence 54332 223455888999999999999999999999999999999999986532110 0000000111111
Q ss_pred hhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 521 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
........+...++.+.+++.+||+.||++|||+.|+++.|+.
T Consensus 257 ---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 257 ---------KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp ---------HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred ---------hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 1111112233345789999999999999999999999999975
No 91
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.3e-42 Score=350.06 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=213.2
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||.||+|.+. ++..||+|.++... .....+.+|+.++++++||||+++++++......++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 4577889999999999999999986 48899999996533 34557899999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 376 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 376 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 99999999999975 34599999999999999999999999 99999999999999999999999999998766544
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
........+|+.|+|||.+.+..++.++||||||+++|+|++ |..||....... ... .... .
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----~~~---~~~~----------~ 228 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYE---LLEK----------D 228 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHH---HHHT----------T
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH---HHhc----------c
Confidence 444445567889999999999999999999999999999999 989987533211 111 1111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.....+...++.+.+++.+|++.||++|||+.|+++.|+..
T Consensus 229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 11112223347799999999999999999999999999863
No 92
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.3e-42 Score=354.50 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=184.3
Q ss_pred CCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-cccceeeEEEEecCCceeEEEeeccCC
Q 007025 304 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLVYPYMSNG 381 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 381 (621)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999976 6899999999643 3456788999999997 999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC---ceEEeecccceecCCCCCceee
Q 007025 382 SVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVVGDFGLAKLLDHCDSHVTT 458 (621)
Q Consensus 382 ~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~Dfgla~~~~~~~~~~~~ 458 (621)
+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++...... ....
T Consensus 92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 167 (325)
T 3kn6_A 92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK 167 (325)
T ss_dssp BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence 9999999888999999999999999999999999 999999999999998665 89999999998665332 2233
Q ss_pred cccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCC
Q 007025 459 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 538 (621)
Q Consensus 459 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 538 (621)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.............+....+..... .......
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~ 240 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF-------SFEGEAW 240 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-------CCCSHHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-------CCCcccc
Confidence 456899999999999999999999999999999999999999764432222222222222221110 0000001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 539 RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 539 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...++++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1234779999999999999999999999864
No 93
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.9e-42 Score=357.04 Aligned_cols=253 Identities=22% Similarity=0.265 Sum_probs=193.1
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||.||+|... +++.||||+++... ....+.+|+.++.+++||||+++++++...+..++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 3467889999999999999999986 57899999997543 2346788999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceEEeecccceecCCC
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~Dfgla~~~~~~ 452 (621)
||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 128 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999999999888899999999999999999999999 9999999999999975 889999999999865432
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+..... .
T Consensus 205 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~~~~-------~ 269 (349)
T 2w4o_A 205 --VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILNCEY-------Y 269 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHTTCC-------C
T ss_pred --cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHhCCC-------c
Confidence 22234569999999999999999999999999999999999999996433211 01111111100 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.........+.++.+++.+||+.||++|||+.|++++-
T Consensus 270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 307 (349)
T 2w4o_A 270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307 (349)
T ss_dssp CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 00111122346789999999999999999999999853
No 94
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-42 Score=350.73 Aligned_cols=245 Identities=24% Similarity=0.286 Sum_probs=193.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||+||+|... +++.||||++...... .....+..|+..+..+ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57889999999999999999986 7899999998654322 2233455566655555 8999999999999999999999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 6688888764 45699999999999999999999999 9999999999999999999999999999876432
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... + ...... ...+...
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~-~~~~~~-----~~~~~~~ 274 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W-QQLRQG-----YLPPEFT 274 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H-HHHTTT-----CCCHHHH
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H-HHHhcc-----CCCcccc
Confidence 22334569999999999875 789999999999999999999777653211 0 011110 0011111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...++++.+++.+||+.||++|||++|++++
T Consensus 275 ----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 275 ----AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1223679999999999999999999999874
No 95
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5e-42 Score=354.38 Aligned_cols=252 Identities=24% Similarity=0.273 Sum_probs=199.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEE----cCCcEEEEEEeccCcc---cchhhHHHHHHHHHhhcccccceeeEEEEecCCc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 370 (621)
.++|++.+.||+|+||.||+++. .+++.||+|+++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36788999999999999999997 4689999999976432 1233457889999999999999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 371 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
.++||||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999999998877899999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+....
T Consensus 173 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~~------- 237 (327)
T 3a62_A 173 HD-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-------KTIDKILKCK------- 237 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHTC-------
T ss_pred cC-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCC-------
Confidence 22 22233456999999999999999999999999999999999999999753221 1111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhh
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLE 571 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~ 571 (621)
...+...+..+.+++.+||+.||++|| ++.|+++|--
T Consensus 238 ----~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 238 ----LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred ----CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 011222346789999999999999999 7788887544
No 96
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.7e-42 Score=358.77 Aligned_cols=253 Identities=23% Similarity=0.254 Sum_probs=196.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|.+.+.||+|+||+||+++.. +++.||||++...... ...+.+|+.+++.++||||+++++++......++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 457889999999999999999976 6899999999754332 3468899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc--eEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--AVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~--~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 999999999998777899999999999999999999999 9999999999999987765 999999999743321
Q ss_pred ceeecccccccccchhhhccCCCCCc-cchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||........ ........... ..
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~~~~~~---------~~ 239 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD---YRKTIQRILSV---------KY 239 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC---HHHHHHHHHTT---------CC
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH---HHHHHHHHhcC---------CC
Confidence 22234569999999999988887655 8999999999999999999975433221 11111111110 00
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........+..+.+++.+||+.||++|||+.|+++|
T Consensus 240 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000001123678999999999999999999999975
No 97
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.1e-42 Score=343.40 Aligned_cols=248 Identities=21% Similarity=0.316 Sum_probs=203.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecC--CceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT--TERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 375 (621)
++|.+.+.||+|+||.||+|.++ ++.||||+++..... .....+.+|+.++++++||||+++++++... ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888999999999999999986 889999999765422 3345789999999999999999999999887 7789999
Q ss_pred eeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 376 PYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999998654 589999999999999999999998 7 99999999999999999999999998764322
Q ss_pred CCCceeecccccccccchhhhccCCCCC---ccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
....||+.|+|||.+.+..++. ++||||||+++|||+||+.||...... ........
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~------- 225 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVAL------- 225 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHH-------
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHh-------
Confidence 2245899999999998765544 799999999999999999999743221 11111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.......+...+..+.+++.+||+.||++|||++|+++.|+.
T Consensus 226 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 226 --EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp --SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111112223334679999999999999999999999999976
No 98
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.1e-42 Score=355.06 Aligned_cols=267 Identities=22% Similarity=0.382 Sum_probs=215.7
Q ss_pred cChHHHHHHhcCCCcCCeeeeccccEEEEEEEc------CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeE
Q 007025 289 FHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLI 362 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~ 362 (621)
+..++++...++|.+.+.||+|+||.||+|.+. +++.||||.+...........+.+|+.+++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344455566788999999999999999999864 36789999997655444556789999999999999999999
Q ss_pred EEEecCCceeEEEeeccCCChhhhhccC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe
Q 007025 363 GFCMTTTERLLVYPYMSNGSVASRLKAK----------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 363 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl 432 (621)
+++...+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 9999999999999999999999998642 4579999999999999999999999 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCce-eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCccccccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKG 510 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~ 510 (621)
+.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---- 247 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---- 247 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH----
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH----
Confidence 999999999999997654322211 122346889999999999999999999999999999999 88888643221
Q ss_pred chHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCC
Q 007025 511 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 575 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 575 (621)
.......... . ...+...+..+.+++.+||+.||++|||+.|++++|++...
T Consensus 248 ---~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 248 ---QVLRFVMEGG-L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp ---HHHHHHHTTC-C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred ---HHHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111111111 0 11122234678999999999999999999999999987533
No 99
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.9e-41 Score=349.15 Aligned_cols=257 Identities=18% Similarity=0.179 Sum_probs=206.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..+ +||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 36788999999999999999996 4789999999865432 23588999999999 9999999999999999999999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc-----eEEeecccceec
Q 007025 376 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLL 449 (621)
Q Consensus 376 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~Dfgla~~~ 449 (621)
||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999 8999999985 46799999999999999999999999 9999999999999998887 999999999876
Q ss_pred CCCCCce------eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 450 DHCDSHV------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 450 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~----~~~~~~~i~~~~ 236 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT----LKERYQKIGDTK 236 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS----HHHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc----HHHHHHHHHhhh
Confidence 5433221 234569999999999999999999999999999999999999997543211 111111111100
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.. ........ .. +++.+++.+||+.||.+||+++++.+.|++
T Consensus 237 ~~--~~~~~~~~----~~-p~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 237 RA--TPIEVLCE----NF-PEMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp HH--SCHHHHTT----TC-HHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred cc--CCHHHHhc----cC-hHHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 00 00000000 11 279999999999999999999999998874
No 100
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=360.60 Aligned_cols=267 Identities=18% Similarity=0.217 Sum_probs=213.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC--ceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--ERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv 374 (621)
.++|.+.+.||+|+||+||+|... +|+.||||+++..........+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357889999999999999999976 489999999976554445567889999999999999999999998765 67999
Q ss_pred EeeccCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe----cCCCceEEeecccce
Q 007025 375 YPYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVVGDFGLAK 447 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~Dfgla~ 447 (621)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997543 399999999999999999999999 99999999999999 788889999999998
Q ss_pred ecCCCCCceeecccccccccchhhhcc--------CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHH
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
..... .......||..|+|||++.. ..++.++|||||||++|||+||+.||.......... ..+...
T Consensus 165 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~---~~~~~~ 239 (396)
T 4eut_A 165 ELEDD--EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKI 239 (396)
T ss_dssp ECCCG--GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH---HHHHHH
T ss_pred EccCC--CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH---HHHHHH
Confidence 76532 22234569999999999875 467789999999999999999999997533322221 122222
Q ss_pred hhhcchhh---hc-----------cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 520 HQEKKLEM---LV-----------DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 520 ~~~~~~~~---~~-----------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
........ +. +..............+.+++.+||+.||++||+++|+++.+++
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 11111100 00 0011223457788899999999999999999999999988876
No 101
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.4e-41 Score=352.74 Aligned_cols=253 Identities=21% Similarity=0.257 Sum_probs=203.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc----ccchhhHHHHHHHHHhhcccccceeeEEEEecCCcee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN----AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (621)
.++|++.+.||+|+||+||+|... +++.||||++.... .......+.+|+.++..++||||+++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356889999999999999999975 68999999986422 1123457899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc---eEEeeccc
Q 007025 373 LVYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGL 445 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~Dfgl 445 (621)
+||||+++|+|.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999887753 34589999999999999999999999 9999999999999986654 99999999
Q ss_pred ceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcch
Q 007025 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525 (621)
Q Consensus 446 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~~~~- 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGKY- 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHHTCC-
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHcCCC-
Confidence 98765432 223345699999999999999999999999999999999999999975221 11111111100
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 526 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+..... .+.++.+++.+||+.||++|||+.|++++
T Consensus 250 --~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 --KMNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --CCCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --CCCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000011111 23678999999999999999999999864
No 102
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=5.6e-41 Score=341.48 Aligned_cols=258 Identities=17% Similarity=0.194 Sum_probs=207.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+..+..+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 45788999999999999999996 4789999999865432 33578899999998 7999999999999999999999
Q ss_pred eeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc-----eEEeecccceec
Q 007025 376 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-----AVVGDFGLAKLL 449 (621)
Q Consensus 376 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~Dfgla~~~ 449 (621)
||+ +++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 999 99999999864 4699999999999999999999999 9999999999999987776 999999999876
Q ss_pred CCCCCc------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 450 DHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 450 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||............ ..+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~ 240 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY-ERIGEKKQST 240 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHH-HHHHHHHHHS
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHH-HHHHhhccCc
Confidence 543321 223456999999999999999999999999999999999999999754322111111 1111111001
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.... ... ..++.+.+++.+||+.||++||++++|++.|+.
T Consensus 241 ~~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~ 280 (298)
T 1csn_A 241 PLRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280 (298)
T ss_dssp CHHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred cHHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 1111 111 123679999999999999999999999999886
No 103
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4e-42 Score=370.50 Aligned_cols=253 Identities=23% Similarity=0.231 Sum_probs=200.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|++.+.||+|+||.||+|... +|+.||||+++... .......+.+|+.++..++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367889999999999999999975 68999999997532 222334678899999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
|||+++|+|.+++.....+++..+..++.||+.||.|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD- 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC-
Confidence 9999999999999887889999999999999999999998 7 9999999999999999999999999999754322
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+....
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~~---------- 365 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------KLFELILMEE---------- 365 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC----------
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-------HHHHHHHhCC----------
Confidence 22234467999999999999999999999999999999999999999743221 1111111110
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLEG 572 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~ 572 (621)
..++...+.++.+++.+||+.||++|| +++|+++|---
T Consensus 366 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f 408 (446)
T 4ejn_A 366 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408 (446)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred -CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccc
Confidence 011222346789999999999999999 99999876543
No 104
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=8.5e-42 Score=361.14 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=200.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcc--cccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAV--HRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 375 (621)
.+|.+.+.||+|+||.||++...+++.||||++..... ......+.+|+.++..++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 46889999999999999999988899999999965432 223457899999999996 599999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
| +.+++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 56789999999888899999999999999999999999 999999999999996 589999999999876543222
Q ss_pred -eeecccccccccchhhhcc-----------CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 456 -VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 456 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~------ 278 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLH------ 278 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHH------
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHH------
Confidence 2334569999999999875 3688999999999999999999999964221 011111
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.+.+......++...+..+.+++.+||+.||++|||+.|++++.
T Consensus 279 ---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 279 ---AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp ---HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---HHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 11222111112222246789999999999999999999999753
No 105
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-41 Score=342.04 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=208.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457889999999999999999976 6899999999765544555678999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC-c
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS-H 455 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~-~ 455 (621)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999999999888899999999999999999999999 999999999999999999999999999986543221 1
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||..|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+ ...... ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~----~~~~~~---~~---- 229 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDW----KEKKTY---LN---- 229 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHH----HTTCTT---ST----
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHh----hhcccc---cC----
Confidence 2234568999999999987765 7789999999999999999999975332111 01111 110000 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.....+..+.+++.+||+.||++|||+.|++++
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011223678899999999999999999999874
No 106
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=344.20 Aligned_cols=254 Identities=26% Similarity=0.362 Sum_probs=207.4
Q ss_pred cCCCcCC-eeeeccccEEEEEEEc---CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 299 SNFSSKN-LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 299 ~~~~~~~-~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
++|.+.+ .||+|+||.||+|... ++..||||+++..........+.+|+.++..++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999854 57889999998765444556799999999999999999999999 55678999
Q ss_pred EeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 375 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999864 35699999999999999999999999 99999999999999999999999999998775433
Q ss_pred Ccee--ecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 454 SHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 454 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
.... ....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~i~~~~------- 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQGK------- 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------HHHHHHHTTC-------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHhcCC-------
Confidence 3221 23346889999999998889999999999999999999 99999743221 1111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....+...+..+.+++.+||+.||++||++.+++++|+..
T Consensus 231 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 231 ---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp ---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1112233447899999999999999999999999999863
No 107
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.1e-42 Score=352.57 Aligned_cols=258 Identities=26% Similarity=0.367 Sum_probs=193.3
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEcC-C---cEEEEEEeccCc-ccchhhHHHHHHHHHhhcccccceeeEEEEecCCc
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQD-G---TVVAVKRLKDGN-AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 370 (621)
...++|++.+.||+|+||.||+|.... + ..||||+++... .......+.+|+.++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999998653 2 279999997543 22345579999999999999999999999987765
Q ss_pred e------eEEEeeccCCChhhhhccC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCce
Q 007025 371 R------LLVYPYMSNGSVASRLKAK------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 438 (621)
Q Consensus 371 ~------~lv~e~~~~g~L~~~l~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 438 (621)
. ++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 9999999999999998632 2699999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHH
Q 007025 439 VVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWV 516 (621)
Q Consensus 439 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 516 (621)
||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~--- 249 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IY--- 249 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HH---
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HH---
Confidence 99999999866443322 2223447789999999999999999999999999999999 899987533211 11
Q ss_pred HHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 517 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 517 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....... ....+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 250 ~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 250 NYLIGGN----------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp HHHHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcCC----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111111 1111223346799999999999999999999999998863
No 108
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.1e-42 Score=356.69 Aligned_cols=251 Identities=23% Similarity=0.282 Sum_probs=206.1
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCcee
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 372 (621)
..++|++.+.||+|+||.||+|..+ +++.||||+++... .......+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999986 47899999997542 122344678899999887 7999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 373 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
+||||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999999998877899999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .
T Consensus 175 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~---------~ 237 (353)
T 2i0e_A 175 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-------ELFQSIMEH---------N 237 (353)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHC---------C
T ss_pred -CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-------HHHHHHHhC---------C
Confidence 22334567999999999999999999999999999999999999999753221 111111111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPK-----MSEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 569 (621)
..++...+.++.+++.+||+.||++||+ ++++++|
T Consensus 238 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1122233477999999999999999995 5777754
No 109
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.6e-42 Score=343.26 Aligned_cols=247 Identities=20% Similarity=0.307 Sum_probs=183.9
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57899999999999999999864 689999999975432 223457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+ +++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred hhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence 999 678888888778899999999999999999999999 99999999999999999999999999997654322
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ..........
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~----------- 228 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-------VLFKNISNGV----------- 228 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC-----------
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC-----------
Confidence 2234459999999999988765 78999999999999999999999743221 1111111110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 01122234678999999999999999999999864
No 110
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=348.21 Aligned_cols=268 Identities=20% Similarity=0.222 Sum_probs=202.8
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
++|++.+.||+|+||+||+|... +|+.||||++....... ....+.+|+.++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999976 58999999986544322 24468899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 158 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-Y 158 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-c
Confidence 999999999988888899999999999999999999999 999999999999999999999999999987653222 2
Q ss_pred eecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHH--------HHHHhhhcchhh
Q 007025 457 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW--------VKKIHQEKKLEM 527 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 527 (621)
.....||..|+|||.+.+ ..++.++||||||+++|+|+||+.||...........+... ............
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 234568999999999976 56899999999999999999999999754332211111000 000000000000
Q ss_pred hccccccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 528 LVDKDLKNNY-----DRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 528 ~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...+...... .+..+..+.+++.+||+.||++|||++|++++-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 0000000000 012346789999999999999999999999753
No 111
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.3e-41 Score=342.63 Aligned_cols=252 Identities=29% Similarity=0.501 Sum_probs=202.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchh------hHHHHHHHHHhhcccccceeeEEEEecCCc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGE------IQFQTEVEMISLAVHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 370 (621)
.++|++.+.||+|+||+||+|... +++.||+|++......... ..+.+|+.++..++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888999999999999999975 7899999998654332221 56889999999999999999999986554
Q ss_pred eeEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcccccCeEEecCCCc-----eEEee
Q 007025 371 RLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYE-----AVVGD 442 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NILl~~~~~-----~kl~D 442 (621)
++||||+++|+|.+.+.. ...+++..+..++.|++.||.|||+. + |+||||||+|||++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 799999999999888764 45799999999999999999999998 8 999999999999988776 99999
Q ss_pred cccceecCCCCCceeecccccccccchhhhc--cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHh
Q 007025 443 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520 (621)
Q Consensus 443 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 520 (621)
||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... ........
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~~ 243 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-----IKFINMIR 243 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-----HHHHHHHH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-----HHHHHHHh
Confidence 999974332 234456999999999984 4557899999999999999999999997433211 11111111
Q ss_pred hhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 521 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
. .......+...++.+.+++.+||+.||++|||++|+++.|++
T Consensus 244 ~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 E---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp H---------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred c---------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1 111122233344789999999999999999999999999975
No 112
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.4e-41 Score=345.24 Aligned_cols=255 Identities=22% Similarity=0.247 Sum_probs=209.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-----hhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
.++|++.+.||+|+||.||+|... +|+.||||.++...... ....+.+|+.++..++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456889999999999999999976 68999999997543222 245789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC----ceEEeecccce
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAK 447 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~Dfgla~ 447 (621)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999999888899999999999999999999999 999999999999999887 79999999998
Q ss_pred ecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhh
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... +......... .
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~---~ 235 (321)
T 2a2a_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANITSVS---Y 235 (321)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTC---C
T ss_pred ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcc---c
Confidence 765432 223456999999999999999999999999999999999999999743221 1111111100 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 571 (621)
..++.... ..+..+.+++.+||+.||++|||+.|++++--
T Consensus 236 ~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~ 275 (321)
T 2a2a_A 236 DFDEEFFS----HTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (321)
T ss_dssp CCCHHHHT----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred ccChhhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 00111111 12367899999999999999999999998543
No 113
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.8e-42 Score=346.95 Aligned_cols=255 Identities=26% Similarity=0.344 Sum_probs=205.7
Q ss_pred hcCCCcCC-eeeeccccEEEEEEEc---CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCcee
Q 007025 298 TSNFSSKN-LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 298 ~~~~~~~~-~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (621)
.++|.+.+ .||+|+||.||+|.+. +++.||||+++...... ....+.+|+.++..++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999653 46789999997553322 345789999999999999999999999 567789
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 373 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
+||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999999999888899999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcee--ecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 453 DSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 453 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
..... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~------ 237 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGE------ 237 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTC------
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCC------
Confidence 43322 22346789999999999889999999999999999999 99999753221 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 238 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 238 ----RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1112223347799999999999999999999999999863
No 114
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-41 Score=356.38 Aligned_cols=265 Identities=17% Similarity=0.177 Sum_probs=202.6
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEcC------CcEEEEEEeccCcccc-h---------hhHHHHHHHHHhhccccccee
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQD------GTVVAVKRLKDGNAIG-G---------EIQFQTEVEMISLAVHRNLLR 360 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~---------~~~~~~e~~~l~~l~H~niv~ 360 (621)
..++|.+.+.||+|+||.||+|.+.+ ++.||||++....... . ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578999999999999999999764 4789999986543110 0 012334555667778999999
Q ss_pred eEEEEecC----CceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec--
Q 007025 361 LIGFCMTT----TERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-- 433 (621)
Q Consensus 361 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~-- 433 (621)
+++++... ...++||||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 99998765 4479999999 99999999765 6799999999999999999999999 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCc------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccc
Q 007025 434 EYYEAVVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTAN 507 (621)
Q Consensus 434 ~~~~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~ 507 (621)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999876432211 1133459999999999999999999999999999999999999998432211
Q ss_pred cccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 508 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
......... ....+..+.++.+.. ...+.++.+++..||+.+|++||++.++++.|+.
T Consensus 269 ---~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 269 ---KYVRDSKIR-YRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp ---HHHHHHHHH-HHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ---HHHHHHHHH-hhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 111111111 112233333333221 1123678999999999999999999999998875
No 115
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-41 Score=356.89 Aligned_cols=252 Identities=22% Similarity=0.279 Sum_probs=206.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++..++||||+++++++......++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 357899999999999999999976 688999999865432 234478899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC--CCceEEeecccceecCCCC
Q 007025 377 YMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 377 ~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~--~~~~kl~Dfgla~~~~~~~ 453 (621)
|+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999999755 4799999999999999999999999 9999999999999974 5789999999998765432
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ............ ..+..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~~~~~---~~~~~- 272 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LETLQNVKRCDW---EFDED- 272 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHCCC---CCCSS-
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCCcc-
Confidence 23344699999999999999999999999999999999999999975322 111111111100 01111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.....+.++.+++.+||+.||++|||+.|++++
T Consensus 273 ---~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 ---AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 112234678999999999999999999999975
No 116
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5e-42 Score=354.42 Aligned_cols=272 Identities=24% Similarity=0.303 Sum_probs=210.6
Q ss_pred cCCCcCCeeeeccccEEEEEEE-----cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEe--cCCce
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTER 371 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 371 (621)
++|++.+.||+|+||.||+|.+ .+++.||||++.... ......+.+|+.++++++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5788899999999999999984 358899999997543 233456899999999999999999999887 45568
Q ss_pred eEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 899999999999999975 45699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCce--eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 451 HCDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 451 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
...... .....||..|+|||.+.+..++.++||||||+++|+|++|+.||........... .+.............
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM--GCERDVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHC--C----CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhc--ccccccccHHHHHHH
Confidence 443322 2334588889999999999999999999999999999999999874322100000 000000000011111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCc
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 576 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 576 (621)
.........+...++.+.+++.+||+.||++|||+.|++++|+.....
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 111122222334457899999999999999999999999999976443
No 117
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=350.94 Aligned_cols=254 Identities=28% Similarity=0.433 Sum_probs=201.6
Q ss_pred cCCCcCCeeeeccccEEEEEEEcC-----CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQD-----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
++|...+.||+|+||.||+|.... +..||||.++..........+.+|+.++..++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 466778999999999999998653 246999999765544445578999999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 374 VYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999754 6799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc--eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 453 DSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 453 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... ......+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... +....+....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------~~~~~~~~~~------ 267 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-------EVMKAINDGF------ 267 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTTC------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHCCC------
Confidence 221 1222346789999999999999999999999999999999 99999643211 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....+...+..+.+++.+||+.||++||++.+++++|+.
T Consensus 268 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 268 ----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp ----CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred ----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111122234679999999999999999999999999976
No 118
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-41 Score=343.35 Aligned_cols=249 Identities=28% Similarity=0.399 Sum_probs=203.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|++.+.||+|+||.||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467889999999999999999876 577999999864321 12244688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc--
Confidence 99999999999998877899999999999999999999998 9999999999999999999999999998654322
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... .
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~-----------~ 223 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-------ETYKRISRV-----------E 223 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHT-----------C
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-------HHHHHHHhC-----------C
Confidence 223456899999999999999999999999999999999999999743221 111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...+...+..+.+++.+||+.||++|||++|++++-
T Consensus 224 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 111222346789999999999999999999999753
No 119
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=351.21 Aligned_cols=255 Identities=22% Similarity=0.385 Sum_probs=200.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCc----EEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCcee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGT----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (621)
.++|++.+.||+|+||.||+|.+. +++ +||+|.++..........+.+|+.++..++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357888999999999999999964 344 368888866555556678999999999999999999999998754 78
Q ss_pred EEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 373 LVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
+|+||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999975 45799999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 452 CDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 452 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.... ......+|..|+|||.+.+..++.++|||||||++|||++ |+.||....... +.. ....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~---~~~~-------- 234 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISS---ILEK-------- 234 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHH---HHHT--------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HHH---HHHc--------
Confidence 3222 2233447889999999999999999999999999999999 999997533211 111 1111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
......+...+.++.+++.+||+.||++||++.|+++.|+..
T Consensus 235 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 235 --GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp --TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111112223346799999999999999999999999999864
No 120
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.9e-41 Score=357.40 Aligned_cols=269 Identities=19% Similarity=0.230 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeec--cccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCceeE
Q 007025 298 TSNFSSKNLVGKG--GFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 373 (621)
..+|++.+.||+| +||.||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678899999999 99999999976 68999999997554322 33468889999999999999999999999999999
Q ss_pred EEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 374 VYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999754 6799999999999999999999999 999999999999999999999999999865422
Q ss_pred CCC------ceeecccccccccchhhhcc--CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHH-HHHHHh--
Q 007025 452 CDS------HVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD-WVKKIH-- 520 (621)
Q Consensus 452 ~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~-~~~~~~-- 520 (621)
... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||.............. ......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 111 11122368999999999987 5789999999999999999999999975332211100000 000000
Q ss_pred ----hh------------cchhhhc-c--------ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 521 ----QE------------KKLEMLV-D--------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 521 ----~~------------~~~~~~~-d--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.. ....... . ...........+..+.+++.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 0000000 0 000001223345679999999999999999999999875
No 121
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.8e-41 Score=339.51 Aligned_cols=250 Identities=20% Similarity=0.264 Sum_probs=199.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
++|.+.+.||+|+||.||++... ++..||+|++...........+.+|+++++.++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56888999999999999999975 68899999997665555566899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecC
Q 007025 378 MSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 378 ~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~ 450 (621)
+++|+|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999998853 46799999999999999999999999 99999999999999 456889999999998654
Q ss_pred CCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
.. .......||+.|+|||.+. +.++.++||||||+++|||++|+.||...... ..............
T Consensus 179 ~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~--- 245 (285)
T 3is5_A 179 SD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-------EVQQKATYKEPNYA--- 245 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCCC---
T ss_pred Cc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-------HHHhhhccCCcccc---
Confidence 32 2233456999999999985 57899999999999999999999999753221 11111110000000
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..... .++.+.+++.+||+.||++|||+.|++++
T Consensus 246 -~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 246 -VECRP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -C--CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -cccCc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011 23678899999999999999999999864
No 122
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1e-40 Score=337.20 Aligned_cols=253 Identities=20% Similarity=0.268 Sum_probs=206.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++.+++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999976 5889999999754322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc---eEEeecccceecCCC
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLAKLLDHC 452 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~Dfgla~~~~~~ 452 (621)
||+++++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999998778899999999999999999999999 9999999999999986655 999999999876532
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ........... . .
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~-~-~---- 226 (284)
T 3kk8_A 162 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKAGAY-D-Y---- 226 (284)
T ss_dssp C--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCC-C-C----
T ss_pred c--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-------HHHHHHHhccc-c-C----
Confidence 2 223456999999999999999999999999999999999999999643221 11111111100 0 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........++++.+++.+||+.||++|||+.|++++
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 -PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000011223678999999999999999999999874
No 123
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-41 Score=353.37 Aligned_cols=259 Identities=22% Similarity=0.227 Sum_probs=202.0
Q ss_pred HHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc----ccchhhHHHHHHHHHhhcccccceeeEEEEecC
Q 007025 294 LQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN----AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 368 (621)
Q Consensus 294 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 368 (621)
+....++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4556778999999999999999999975 68899999986432 233455789999999999999999999999999
Q ss_pred CceeEEEeeccCCChhhhhcc----------------------------------------CCCCCHHHHHHHHHHHHHH
Q 007025 369 TERLLVYPYMSNGSVASRLKA----------------------------------------KPSLDWATRKRIALGAARG 408 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~----------------------------------------~~~l~~~~~~~i~~~ia~~ 408 (621)
+..++||||+++|+|.+++.. ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999998852 1123577788999999999
Q ss_pred HHHHhhcCCCceEEcccccCeEEecCCC--ceEEeecccceecCCCCC---ceeecccccccccchhhhcc--CCCCCcc
Q 007025 409 LLYLHEQCDPKIIHRDVKAANILLDEYY--EAVVGDFGLAKLLDHCDS---HVTTAVRGTVGHIAPEYLST--GQSSEKT 481 (621)
Q Consensus 409 L~~LH~~~~~~ivH~Dlkp~NILl~~~~--~~kl~Dfgla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~s 481 (621)
|.|||+. +|+||||||+|||++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998766 899999999986543221 12344569999999999975 6789999
Q ss_pred chHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 007025 482 DVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP 561 (621)
Q Consensus 482 DvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 561 (621)
|||||||++|||++|+.||...... +........... ...+ .....++.+.+++.+||+.||++||
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLC--FENP-----NYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCC--TTSG-----GGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccc--cCCc-----ccccCCHHHHHHHHHHcCCChhHCC
Confidence 9999999999999999999743321 111111111100 0000 0111236789999999999999999
Q ss_pred CHHHHHHH
Q 007025 562 KMSEVVRM 569 (621)
Q Consensus 562 s~~evl~~ 569 (621)
++.|++++
T Consensus 324 s~~~~l~h 331 (345)
T 3hko_A 324 DAMRALQH 331 (345)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhcC
Confidence 99999875
No 124
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=347.93 Aligned_cols=267 Identities=25% Similarity=0.314 Sum_probs=199.6
Q ss_pred HhcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcc----cchhhHHHHHHHHHhhcc---cccceeeEEEEecC
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNA----IGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTT 368 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~ 368 (621)
..++|++.+.||+|+||+||+|.. .+++.||||+++.... ......+.+|+.++..++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999996 4689999999864321 112235677888777665 99999999999875
Q ss_pred C-----ceeEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEe
Q 007025 369 T-----ERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVG 441 (621)
Q Consensus 369 ~-----~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 441 (621)
. ..++||||+. |+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 59999988654 399999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh
Q 007025 442 DFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 521 (621)
Q Consensus 442 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 521 (621)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.........
T Consensus 163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99999865432 2234456999999999999999999999999999999999999999754332111111110000000
Q ss_pred hcchhhhc--cccccC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 522 EKKLEMLV--DKDLKN-------NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 522 ~~~~~~~~--d~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........ ...... ...+..++.+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000000 000000 0011234678999999999999999999999865
No 125
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-42 Score=357.25 Aligned_cols=258 Identities=22% Similarity=0.281 Sum_probs=208.5
Q ss_pred cCCCcCCeeeeccccEEEEEEE----cCCcEEEEEEeccCcc---cchhhHHHHHHHHHhhc-ccccceeeEEEEecCCc
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYL----QDGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 370 (621)
++|++.+.||+|+||.||++.. .+++.||||+++.... ......+.+|+.++..+ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5788999999999999999997 3689999999975321 12334577899999999 59999999999999999
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 371 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
.++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999999998877899999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccchhhhccC--CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTG--QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
...........||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...........
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~------ 281 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKS------ 281 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---HHHHHHHHHHC------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---HHHHHHHHhcc------
Confidence 4333334456799999999999863 478999999999999999999999975432211 11111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcC
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRMLEGD 573 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~ 573 (621)
...++...+..+.+++.+||+.||++|| +++|++++.--.
T Consensus 282 -----~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~ 326 (355)
T 1vzo_A 282 -----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326 (355)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred -----CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence 1112223346789999999999999999 999999876543
No 126
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=352.85 Aligned_cols=245 Identities=21% Similarity=0.281 Sum_probs=205.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-------hhhHHHHHHHHHhhcccccceeeEEEEecC
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLAVHRNLLRLIGFCMTT 368 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 368 (621)
..++|++.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3567999999999999999999964 68899999997543211 233577899999999999999999999999
Q ss_pred CceeEEEeeccCC-ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccce
Q 007025 369 TERLLVYPYMSNG-SVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447 (621)
Q Consensus 369 ~~~~lv~e~~~~g-~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~ 447 (621)
+..++||||+.+| +|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999777 9999999888899999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 448 LLDHCDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 448 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ..
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------~~ 238 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------VE 238 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------TT
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------Hh
Confidence 7654332 234569999999999988876 78999999999999999999999642110 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 527 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.... .+...+.++.+++.+||+.||++|||+.|++++-
T Consensus 239 ~~~~------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 239 AAIH------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp TCCC------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred hccC------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0000 0111236789999999999999999999999864
No 127
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-41 Score=366.21 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=207.3
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.+|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999976 799999999964321 123446889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 9999999999999888899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .....+.... .
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-------~~~~~i~~~~---------~- 233 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-------TLFKKICDGI---------F- 233 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-------HHHHHHHTTC---------C-
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-------HHHHHHhcCC---------c-
Confidence 2334569999999999988765 68999999999999999999999753221 1111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+...+.++.+++.+||+.||++|||++|++++
T Consensus 234 -~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 -YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0112233678999999999999999999999973
No 128
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-41 Score=343.63 Aligned_cols=254 Identities=28% Similarity=0.372 Sum_probs=203.5
Q ss_pred CCCcCCeeeeccccEEEEEEEcC----CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCce-eEE
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER-LLV 374 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv 374 (621)
.|...+.||+|+||+||+|.+.+ +..||+|.++..........+.+|+.+++.++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45567899999999999998542 2379999997655444556789999999999999999999999876655 999
Q ss_pred EeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 375 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
|||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999976 45789999999999999999999999 99999999999999999999999999997654322
Q ss_pred ---CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 454 ---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 454 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
........++..|+|||.+.+..++.++||||||+++|+|+||..|+....... .... ......
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~---~~~~---~~~~~~------- 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF---DLTH---FLAQGR------- 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG---GHHH---HHHTTC-------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH---HHHH---HhhcCC-------
Confidence 112233458899999999999999999999999999999999766654322211 1111 111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....+...+..+.+++.+||+.||.+|||++++++.|+.
T Consensus 246 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 246 ---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111122234679999999999999999999999999976
No 129
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.2e-41 Score=342.14 Aligned_cols=259 Identities=18% Similarity=0.172 Sum_probs=201.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc--hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|.+.+.||+|+||.||+|... +++.||+|+++...... ....+.+|+.++..++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999976 68899999997543322 235688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999998877899999999999999999999999 999999999999999999999999999986654333
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......|+..|+|||.+.+..++.++||||||+++|||+||+.||...... .+........ ...
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~----~~~--- 254 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAI----PRP--- 254 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCC----CCG---
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCC----CCc---
Confidence 3334456999999999999999999999999999999999999999753221 1111111000 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcCC
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRP-KMSEVVRMLEGDG 574 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~ 574 (621)
.......+..+.+++.+||+.||++|| +++++++.|+...
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 011122336789999999999999999 9999999998753
No 130
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=351.66 Aligned_cols=266 Identities=18% Similarity=0.185 Sum_probs=200.1
Q ss_pred cCCCcCCeeeeccccEEEEEEEc----CCcEEEEEEeccCcccc----------hhhHHHHHHHHHhhcccccceeeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAIG----------GEIQFQTEVEMISLAVHRNLLRLIGF 364 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~H~niv~l~~~ 364 (621)
++|.+.+.||+|+||.||+|... ++..||||++....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888999999999999999975 57889999987543211 11236678888889999999999999
Q ss_pred Eec----CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC--ce
Q 007025 365 CMT----TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY--EA 438 (621)
Q Consensus 365 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~--~~ 438 (621)
+.. ....++||||+ +++|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcE
Confidence 987 67889999999 999999998777899999999999999999999999 999999999999999877 99
Q ss_pred EEeecccceecCCCCCc------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccch
Q 007025 439 VVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512 (621)
Q Consensus 439 kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~ 512 (621)
||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||+||+.||........ .
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~---~ 269 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV---A 269 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH---H
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH---H
Confidence 99999999876432111 11344699999999999999999999999999999999999999964221110 0
Q ss_pred HHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCC
Q 007025 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGL 575 (621)
Q Consensus 513 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 575 (621)
........... .......... ....+.++.+++.+||+.||++||++.+|++.|+....
T Consensus 270 ~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111110000 0000000000 00123679999999999999999999999999997543
No 131
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-41 Score=353.54 Aligned_cols=275 Identities=20% Similarity=0.260 Sum_probs=210.9
Q ss_pred CCcccChHHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-----cccc
Q 007025 285 NLKRFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-----HRNL 358 (621)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----H~ni 358 (621)
+...+.+++.....++|.+.+.||+|+||+||+|... +++.||||+++... .....+..|+.++..+. ||||
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 4456667777777889999999999999999999974 68899999996432 23345778999998886 9999
Q ss_pred eeeEEEEecCCceeEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC--
Q 007025 359 LRLIGFCMTTTERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-- 434 (621)
Q Consensus 359 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~-- 434 (621)
+++++++...+..++||||+ +++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 99999999999999999999 899999997543 599999999999999999999999 9999999999999975
Q ss_pred -----------------------CCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHH
Q 007025 435 -----------------------YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLL 491 (621)
Q Consensus 435 -----------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ 491 (621)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 789999999999865432 23456899999999999999999999999999999
Q ss_pred HHHhCCCCcccCcccccccchH--------HHHHHHhhhcchhhhccccccCC--------------------CCHHHHH
Q 007025 492 ELISGLRALEFGKTANQKGAML--------DWVKKIHQEKKLEMLVDKDLKNN--------------------YDRIELE 543 (621)
Q Consensus 492 elltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~d~~~~~~--------------------~~~~~~~ 543 (621)
||+||+.||...........+. .+..................... +.....+
T Consensus 251 ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (360)
T 3llt_A 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHE 330 (360)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCH
T ss_pred HHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHH
Confidence 9999999997543221110000 00000000000000000000000 0001125
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 544 EMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 544 ~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.+.+++.+||+.||++|||++|++++
T Consensus 331 ~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 331 LFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 67899999999999999999999864
No 132
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.2e-41 Score=349.54 Aligned_cols=252 Identities=27% Similarity=0.412 Sum_probs=202.5
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcE--EEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTV--VAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (621)
++|++.+.||+|+||.||+|... ++.. ||+|.++..........+.+|+.++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57889999999999999999965 4554 4999987654444556789999999999 899999999999999999999
Q ss_pred EeeccCCChhhhhccCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCce
Q 007025 375 YPYMSNGSVASRLKAKP----------------SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 438 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~----------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 438 (621)
|||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997543 799999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHH
Q 007025 439 VVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVK 517 (621)
Q Consensus 439 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 517 (621)
||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ....
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------ELYE 252 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-------HHHH
Confidence 99999999743211 11223347889999999998889999999999999999998 99999643221 1111
Q ss_pred HHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 518 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..... .....+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 253 ~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 253 KLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HGGGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhhcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111 1111122234679999999999999999999999999975
No 133
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.7e-41 Score=369.60 Aligned_cols=254 Identities=25% Similarity=0.298 Sum_probs=208.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|...++||+|+||.||+|... +|+.||+|++.... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999976 68999999996532 122345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 375 YPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
|||+++|+|.+++...+ .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987543 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+.. .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~----~--------- 404 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----V--------- 404 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH----C---------
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc----c---------
Confidence 2 233457999999999999989999999999999999999999999754322111111111110 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHh
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRP-----KMSEVVRML 570 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 570 (621)
...++...+.++.+++.+||+.||++|| +++|+++|-
T Consensus 405 -~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp 446 (576)
T 2acx_A 405 -PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446 (576)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred -cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence 1112223347799999999999999999 788888653
No 134
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=345.02 Aligned_cols=250 Identities=27% Similarity=0.399 Sum_probs=196.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEeec
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 378 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 378 (621)
++|++.+.||+|+||.||+|.+. ++.||||.+... .....|.+|+.++++++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 56788899999999999999986 788999998643 23457899999999999999999999886 4589999999
Q ss_pred cCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc-eEEeecccceecCCCCC
Q 007025 379 SNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE-AVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 379 ~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~-~kl~Dfgla~~~~~~~~ 454 (621)
++|+|.+++.... .+++..+..++.|+++||.|||+....+|+||||||+|||++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 9999999998654 4789999999999999999999932239999999999999998886 799999999755321
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.....||+.|+|||++.+..++.++||||||+++|||+||+.||...... ............ .+.
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~------~~~-- 224 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNGT------RPP-- 224 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHHHHHHHHTTC------CCC--
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHHHHHHHhcCC------CCC--
Confidence 22345999999999999999999999999999999999999999743221 111111111110 011
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.....+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 225 --~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 225 --LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp --CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 1122336789999999999999999999999999863
No 135
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=354.75 Aligned_cols=263 Identities=21% Similarity=0.292 Sum_probs=196.3
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 377 (621)
++|.+.+.||+|+||+||+|... +++.||||+++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999976 68999999997554333333456799999999999999999999999999999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 378 MSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 378 ~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
++ |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 98 5888888754 4699999999999999999999999 99999999999999999999999999998654322 22
Q ss_pred eecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc---chhhhcc--
Q 007025 457 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK---KLEMLVD-- 530 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d-- 530 (621)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+....... .......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ----LHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCCCTTTSTTGGGCH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChHhchhhhcch
Confidence 234468999999999876 5689999999999999999999999975433211 11111110000 0000000
Q ss_pred -------ccccC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 531 -------KDLKN----NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 531 -------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
+.... ...+..+.++.+++.+||+.||++|||++|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 00000 00112246789999999999999999999998743
No 136
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=356.20 Aligned_cols=253 Identities=30% Similarity=0.440 Sum_probs=193.9
Q ss_pred CCCcCCeeeeccccEEEEEEEc--C--CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEec-CCceeEE
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQ--D--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT-TTERLLV 374 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv 374 (621)
.|...+.||+|+||+||+|.+. + +..||||.++.........+|.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4666789999999999999864 2 246899998765545556689999999999999999999998764 4578999
Q ss_pred EeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 375 YPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
|||+++|+|.+++... ..+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999754 4689999999999999999999999 99999999999999999999999999998654322
Q ss_pred Cc---eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 454 SH---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 454 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.. ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||...... .... .......
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~---~~~~~~~----- 314 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITV---YLLQGRR----- 314 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHH---HHHTTCC-----
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHH---HHHcCCC-----
Confidence 11 1233457889999999999999999999999999999999 56666533221 1111 1111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
...+...+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 315 -----~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 315 -----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01122234679999999999999999999999999986
No 137
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=376.33 Aligned_cols=246 Identities=26% Similarity=0.367 Sum_probs=199.6
Q ss_pred eeeeccccEEEEEEEc---CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEeeccCCC
Q 007025 306 LVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382 (621)
Q Consensus 306 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g~ 382 (621)
.||+|+||.||+|.++ ++..||||+++..........|.+|+.++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 4667999999876555556789999999999999999999999976 56899999999999
Q ss_pred hhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCcee--ec
Q 007025 383 VASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVT--TA 459 (621)
Q Consensus 383 L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~--~~ 459 (621)
|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999874 35699999999999999999999999 999999999999999999999999999987643332221 22
Q ss_pred ccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCC
Q 007025 460 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD 538 (621)
Q Consensus 460 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 538 (621)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||...... +....+.... +...+
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~~----------~~~~p 561 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQGK----------RMECP 561 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-------HHHHHHHTTC----------CCCCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHHHcCC----------CCCCC
Confidence 335689999999999999999999999999999998 99999753321 1111111111 11223
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 539 RIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 539 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..++.++.+++.+||+.||++||++.+|++.|+.
T Consensus 562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 3345789999999999999999999999999986
No 138
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-41 Score=357.15 Aligned_cols=253 Identities=25% Similarity=0.271 Sum_probs=198.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc--chhhHHHHHHHH-HhhcccccceeeEEEEecCCceeEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEM-ISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
++|++.+.||+|+||.||+|+.+ +++.||||+++..... .....+..|..+ ++.++||||+++++++...+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888999999999999999976 5889999999754322 223346667665 5678999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-~ 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-N 193 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-C
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC-C
Confidence 99999999999998877899999999999999999999999 9999999999999999999999999999854322 2
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... ..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~---------~~- 256 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-------EMYDNILNK---------PL- 256 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-------HHHHHHHHS---------CC-
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHhc---------cc-
Confidence 2334567999999999999999999999999999999999999999753321 111111111 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.++...+..+.+++.+||+.||++||++.+.++.+..+
T Consensus 257 -~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 257 -QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp -CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred -CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 11122336789999999999999999986555444444
No 139
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.9e-41 Score=342.86 Aligned_cols=255 Identities=30% Similarity=0.437 Sum_probs=201.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcC----CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEe-cCCcee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM-TTTERL 372 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~ 372 (621)
..+|++.+.||+|+||+||+|...+ +..||+|.++..........+.+|+.++++++||||+++++++. ..+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3567888999999999999998642 23689999976555455567999999999999999999999865 456789
Q ss_pred EEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 373 LVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999975 45689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC---ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCC-CcccCcccccccchHHHHHHHhhhcchhh
Q 007025 452 CDS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLR-ALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 452 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
... .......||+.|+|||.+.+..++.++||||||+++|||++|.. ||...... ... .......
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~---~~~~~~~---- 249 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DIT---VYLLQGR---- 249 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THH---HHHHTTC----
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHH---HHHhcCC----
Confidence 221 12233457889999999999999999999999999999999554 44432211 111 1111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 250 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 250 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 001112223679999999999999999999999999976
No 140
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.5e-42 Score=375.25 Aligned_cols=255 Identities=27% Similarity=0.378 Sum_probs=209.7
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
...++|++.+.||+|+||.||+|.++++..||||+++.... ..+.|.+|+.++++++||||+++++++.. +..++||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 34567888999999999999999998888999999975432 34579999999999999999999999876 6789999
Q ss_pred eeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 376 PYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 376 e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999999974 35699999999999999999999999 99999999999999999999999999998654321
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
........++..|+|||.+....++.++|||||||++|||+| |+.||...... +....+....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-------~~~~~i~~~~--------- 481 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVLDQVERGY--------- 481 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-------HHHHHHHTTC---------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCC---------
Confidence 112223447789999999999999999999999999999999 89998643211 1111111111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
+...+..++..+.+++.+||+.||++|||+++|++.|+..
T Consensus 482 -~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 482 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111223447799999999999999999999999999875
No 141
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=339.70 Aligned_cols=249 Identities=25% Similarity=0.359 Sum_probs=184.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+|+.++.+++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 56888999999999999999974 789999999964321 122356889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999999864 6799999999999999999999999 999999999999999999999999999987643222
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... . .+.....
T Consensus 168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~---------~~~~~~~- 229 (278)
T 3cok_A 168 -KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-------N---------KVVLADY- 229 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSSCC-
T ss_pred -cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-------H---------HHhhccc-
Confidence 223356899999999999989999999999999999999999999753321110 0 0000000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+...+.++.+++.+||+.||++|||+++++++
T Consensus 230 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 -EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1122234678999999999999999999999864
No 142
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.8e-41 Score=337.35 Aligned_cols=251 Identities=19% Similarity=0.234 Sum_probs=204.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|.+.+.||+|+||.||+|... ++..||+|.+..... .....+.+|+.++..++||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 457889999999999999999976 477899999865433 335578999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecCCCC
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~~~~ 453 (621)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 999999999998878899999999999999999999999 99999999999999 788999999999998765332
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
......||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... ........... . .....
T Consensus 164 --~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~-~--~~~~~ 230 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------EVMLKIREGTF-T--FPEKD 230 (277)
T ss_dssp --CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCC-C--CCHHH
T ss_pred --chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCCC-C--CCchh
Confidence 2334569999999999865 4899999999999999999999999753321 11111111100 0 00000
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.. ..++.+.+++.+||+.||++|||+.|++++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 231 WL----NVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hh----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 123678999999999999999999999863
No 143
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.6e-41 Score=340.29 Aligned_cols=259 Identities=28% Similarity=0.436 Sum_probs=195.0
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||+||+|... ..||||+++..... .....+.+|+.++++++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3567999999999999999999865 35999999755432 2345789999999999999999999965 456789999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCC-
Q 007025 376 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD- 453 (621)
Q Consensus 376 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~- 453 (621)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999964 45799999999999999999999999 99999999999999999999999999997654322
Q ss_pred Cceeecccccccccchhhhc---cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 454 SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
........||+.|+|||.+. ...++.++||||||+++|||++|+.||....... .... .... ... .
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~---~~~~-~~~----~ 244 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD---QIIE---MVGR-GSL----S 244 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH---HHHH---HHHH-TSC----C
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH---HHHH---Hhcc-ccc----C
Confidence 22233456999999999986 5678889999999999999999999997532211 1111 1111 110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
+.. .......+..+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 245 ~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 245 PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 000 111223347799999999999999999999999999874
No 144
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-40 Score=353.32 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=192.6
Q ss_pred cCCCcC-CeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHh-hcccccceeeEEEEec----CCce
Q 007025 299 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLIGFCMT----TTER 371 (621)
Q Consensus 299 ~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~----~~~~ 371 (621)
++|.+. ++||+|+||+||++... +++.||||+++.. ..+.+|+.++. ..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 456555 68999999999999976 6889999998532 35677888764 4589999999998875 5678
Q ss_pred eEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceEEeecccc
Q 007025 372 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 446 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~Dfgla 446 (621)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999999864 3599999999999999999999999 9999999999999997 789999999999
Q ss_pred eecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 447 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...............+.. .. ..
T Consensus 212 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~~-~~ 285 (400)
T 1nxk_A 212 KETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQ-YE 285 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---TC-CC
T ss_pred cccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---Cc-cc
Confidence 865432 2233456899999999999999999999999999999999999999754332221111111110 00 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 527 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.........+.++.+++.+||+.||++|||+.|++++-
T Consensus 286 ------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 286 ------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp ------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00000112346789999999999999999999999853
No 145
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.2e-40 Score=334.55 Aligned_cols=259 Identities=20% Similarity=0.245 Sum_probs=202.5
Q ss_pred HhcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEE-ecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC-MTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv 374 (621)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 457899999999999999999996 4689999998754432 23578899999999988877776665 566778999
Q ss_pred EeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecC
Q 007025 375 YPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~ 450 (621)
|||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 8999999874 45799999999999999999999999 99999999999999 789999999999998765
Q ss_pred CCCCc------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcc
Q 007025 451 HCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524 (621)
Q Consensus 451 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+........ ...
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-HSC
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc-cch
Confidence 44321 22345699999999999999999999999999999999999999986443322222211111110 000
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 525 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
... .... .+..+.+++.+||+.||++|||+.++++.|++
T Consensus 239 ~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (296)
T 4hgt_A 239 IEV-----LCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp HHH-----HTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred hhh-----hhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 000 1111 23679999999999999999999999999886
No 146
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.3e-41 Score=351.58 Aligned_cols=266 Identities=18% Similarity=0.249 Sum_probs=196.7
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
..++|.+.+.||+|+||+||+|... +++.||||+++...... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467899999999999999999865 68999999997543322 234577999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe-----cCCCceEEeecccceec
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL-----DEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl-----~~~~~~kl~Dfgla~~~ 449 (621)
|||+++ +|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||+ ++++.+||+|||+++..
T Consensus 112 ~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 999984 9999999888899999999999999999999999 99999999999999 45556999999999866
Q ss_pred CCCCCceeecccccccccchhhhccCC-CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh--hcchh
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ--EKKLE 526 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 526 (621)
.... .......||..|+|||++.+.. ++.++|||||||++|||++|+.||........ .......... .....
T Consensus 188 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 188 GIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ---LFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTST
T ss_pred CCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH---HHHHHHHhCCCchhhhh
Confidence 4322 2223445899999999998754 89999999999999999999999975432111 1111111000 00000
Q ss_pred hhc-c-------ccccC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 527 MLV-D-------KDLKN-----NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 527 ~~~-d-------~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
... . +.... ........++.+++.+||+.||++|||++|++++-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 320 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence 000 0 00000 00111346789999999999999999999998743
No 147
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-40 Score=342.36 Aligned_cols=270 Identities=25% Similarity=0.344 Sum_probs=202.7
Q ss_pred ChHHHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhh--cccccceeeEEEEec
Q 007025 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMT 367 (621)
Q Consensus 290 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~ 367 (621)
.........++|++.+.||+|+||.||+|... ++.||||++.... ...+..|.+++.. ++||||+++++++..
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 33334445678999999999999999999986 8999999985432 2344555555554 489999999999987
Q ss_pred C----CceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCceEEcccccCeEEecCCCce
Q 007025 368 T----TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC-----DPKIIHRDVKAANILLDEYYEA 438 (621)
Q Consensus 368 ~----~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NILl~~~~~~ 438 (621)
. ...++||||+++|+|.+++... .+++..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 7 6789999999999999999765 5999999999999999999999752 4489999999999999999999
Q ss_pred EEeecccceecCCCCCce---eecccccccccchhhhccCCCCCc------cchHhHHHHHHHHHhC----------CCC
Q 007025 439 VVGDFGLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGILLLELISG----------LRA 499 (621)
Q Consensus 439 kl~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------sDvwS~Gvil~elltg----------~~p 499 (621)
||+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||+|| ..|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999998664433221 124469999999999988777665 9999999999999999 444
Q ss_pred cccCcccccccchHHHHHHHhhhcchhhhccccccCC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 500 LEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
|........ ............. ..+..... ....++.++.+++.+||+.||++|||+.|++++|+.
T Consensus 262 ~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 262 YHDLVPSDP---SYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTTSCSSC---CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HhhhcCCCC---chhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 442211111 1111111111110 01111110 123567889999999999999999999999999986
No 148
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-41 Score=358.26 Aligned_cols=267 Identities=22% Similarity=0.335 Sum_probs=192.8
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcc-cccceeeEEEEecCC--ce
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTT--ER 371 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~ 371 (621)
..++|++.+.||+|+||.||+|... +|+.||||++..... .....++.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999965 689999999865422 223446788999999997 999999999997544 68
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
++||||++ |+|..++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 99999998 5899888764 689999999999999999999999 999999999999999999999999999986532
Q ss_pred CC--------------------Cceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCccccccc
Q 007025 452 CD--------------------SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 510 (621)
Q Consensus 452 ~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~ 510 (621)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 241 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 11 112234569999999999986 678999999999999999999999997544322111
Q ss_pred chHHHHHHHhhhcchhhhc------------------cccccCCC------------CHHHHHHHHHHHHHccCCCCCCC
Q 007025 511 AMLDWVKKIHQEKKLEMLV------------------DKDLKNNY------------DRIELEEMVQVALLCTQYLPSLR 560 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~------------------d~~~~~~~------------~~~~~~~l~~li~~cl~~dP~~R 560 (621)
.+...+.. .....+..+. .......+ ....++++.+++.+||+.||++|
T Consensus 242 ~i~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 242 RIIGVIDF-PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHCC-CCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHhcCC-CCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 11110000 0000000000 00000000 00123678999999999999999
Q ss_pred CCHHHHHHH
Q 007025 561 PKMSEVVRM 569 (621)
Q Consensus 561 Ps~~evl~~ 569 (621)
||++|+++|
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999999976
No 149
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-41 Score=351.96 Aligned_cols=253 Identities=20% Similarity=0.285 Sum_probs=203.3
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (621)
..++|++.+.||+|+||.||++..+ +++.||||+++.... ...+|++++.++ +||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 3567899999999999999999976 688999999965432 234688888777 799999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC----CceEEeecccceecC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY----YEAVVGDFGLAKLLD 450 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~----~~~kl~Dfgla~~~~ 450 (621)
|||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||+.++ +.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999998888899999999999999999999999 99999999999998533 359999999998765
Q ss_pred CCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+.... .
T Consensus 172 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~i~~~~-~----- 240 (342)
T 2qr7_A 172 AENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD----TPEEILARIGSGK-F----- 240 (342)
T ss_dssp CTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS----CHHHHHHHHHHCC-C-----
T ss_pred CCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC----CHHHHHHHHccCC-c-----
Confidence 4322 233456899999999998888899999999999999999999999743211 1111222221111 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.....+....+.++.+++.+||+.||++|||+.|++++
T Consensus 241 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 -SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111122334778999999999999999999999864
No 150
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.8e-40 Score=335.21 Aligned_cols=252 Identities=21% Similarity=0.257 Sum_probs=203.8
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-----chhhHHHHHHHHHhhcccccceeeEEEEecCCcee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-----GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 372 (621)
++|++.+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.++.+++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999986 6899999998754322 12457899999999999999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC----ceEEeeccccee
Q 007025 373 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY----EAVVGDFGLAKL 448 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~Dfgla~~ 448 (621)
+||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++..
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999998777899999999999999999999999 999999999999998877 899999999987
Q ss_pred cCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 449 LDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 449 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
..... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... ..
T Consensus 162 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~---~~ 229 (283)
T 3bhy_A 162 IEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------ETLTNISAVN---YD 229 (283)
T ss_dssp CC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTC---CC
T ss_pred ccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------HHHHHhHhcc---cC
Confidence 64322 223446899999999999999999999999999999999999999753221 1111111100 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
....... ..++.+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 230 FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0001111 123678999999999999999999999874
No 151
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.3e-41 Score=341.33 Aligned_cols=251 Identities=28% Similarity=0.379 Sum_probs=208.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.+.|+..+.||+|+||.||+|... +++.||||++...........+.+|+.++..++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999865 6889999999766555556689999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
|+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 101 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 175 (303)
T 3a7i_A 101 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK 175 (303)
T ss_dssp CCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CC
T ss_pred eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-cc
Confidence 9999999999875 4699999999999999999999999 99999999999999999999999999998765332 12
Q ss_pred eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCC
Q 007025 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN 536 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 536 (621)
.....||..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... ..+.....
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~------~~~~~~~~ 242 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------KVLFLIPKN------NPPTLEGN 242 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHS------CCCCCCSS
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-------HHHHHhhcC------CCCCCccc
Confidence 23456899999999999999999999999999999999999998743221 111111111 01111122
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 537 YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 537 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.+..+.+++.+||+.||++|||+.|++++.
T Consensus 243 ----~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 243 ----YSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ----CCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ----cCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 236789999999999999999999998754
No 152
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.5e-40 Score=333.81 Aligned_cols=258 Identities=20% Similarity=0.243 Sum_probs=205.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEE-ecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFC-MTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ 375 (621)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+.++..++|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46789999999999999999996 5789999999865432 23688999999999988877666655 5566779999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecCC
Q 007025 376 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 376 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~~ 451 (621)
||+ +++|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 899999997 455799999999999999999999999 99999999999999 4889999999999987654
Q ss_pred CCCc------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcch
Q 007025 452 CDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525 (621)
Q Consensus 452 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.................... ....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 239 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STPI 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-HSCH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-CCch
Confidence 4321 12345699999999999999999999999999999999999999986433222222211111111 0000
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 526 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
. ..... .++++.+++.+||+.||++|||+.++++.|+.
T Consensus 240 ~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 240 E-----VLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp H-----HHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred H-----HHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 0 01111 23679999999999999999999999999875
No 153
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.5e-41 Score=344.21 Aligned_cols=252 Identities=22% Similarity=0.330 Sum_probs=202.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcC-C-------cEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQD-G-------TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 369 (621)
.++|.+.+.||+|+||.||+|.... + ..||+|++.... ......+.+|+.++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 3578889999999999999998653 3 479999986543 234457899999999999999999999999999
Q ss_pred ceeEEEeeccCCChhhhhccCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc--------eEE
Q 007025 370 ERLLVYPYMSNGSVASRLKAKPS-LDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--------AVV 440 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~~-l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~--------~kl 440 (621)
..++||||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999986543 99999999999999999999999 9999999999999998887 999
Q ss_pred eecccceecCCCCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHH
Q 007025 441 GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 441 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
+|||++..... .....||..|+|||.+.+ ..++.++||||||+++|||++|..|+....... ......
T Consensus 163 ~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~------~~~~~~ 231 (289)
T 4fvq_A 163 SDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ------RKLQFY 231 (289)
T ss_dssp CCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHH
T ss_pred ccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH------HHHHHh
Confidence 99999865432 223458899999999987 678999999999999999999765554322111 001111
Q ss_pred hhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCc
Q 007025 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 576 (621)
Q Consensus 520 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 576 (621)
.... . .+...+.++.+++.+||+.||++|||+.|++++|+....+
T Consensus 232 ~~~~--------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 232 EDRH--------Q----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HTTC--------C----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred hccC--------C----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1000 0 0111125688999999999999999999999999986544
No 154
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=353.94 Aligned_cols=246 Identities=23% Similarity=0.264 Sum_probs=196.1
Q ss_pred CCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEeeccCCC
Q 007025 304 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSNGS 382 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g~ 382 (621)
.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.++.+++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 578999999999999975 689999999975432 344578999999999999999999999999999999999999999
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe--cCCCceEEeecccceecCCCCCceeec
Q 007025 383 VASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL--DEYYEAVVGDFGLAKLLDHCDSHVTTA 459 (621)
Q Consensus 383 L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl--~~~~~~kl~Dfgla~~~~~~~~~~~~~ 459 (621)
|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...... ....
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~ 247 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKV 247 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cccc
Confidence 99988644 4699999999999999999999999 99999999999999 567899999999998765432 2233
Q ss_pred ccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCCH
Q 007025 460 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDR 539 (621)
Q Consensus 460 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 539 (621)
..||+.|+|||++....++.++|||||||++|||++|+.||...... .....+...... .......
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~---~~~~~~~---- 313 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRWD---LEDEEFQ---- 313 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCCC---SCSGGGT----
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCC---CChhhhc----
Confidence 46999999999999889999999999999999999999999754321 111111111100 0001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 540 IELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 540 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..++++.+++.+||+.||++|||+.|++++
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 223678999999999999999999999974
No 155
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7e-41 Score=357.55 Aligned_cols=256 Identities=21% Similarity=0.314 Sum_probs=195.6
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-------cchhhHHHHHHHHHhhcccccceeeEEEEec
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAVHRNLLRLIGFCMT 367 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 367 (621)
...++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999975 588999999865321 112235889999999999999999999975
Q ss_pred CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC---CceEEeecc
Q 007025 368 TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFG 444 (621)
Q Consensus 368 ~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~Dfg 444 (621)
.+..++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 455799999999999999999888899999999999999999999999 99999999999999754 459999999
Q ss_pred cceecCCCCCceeecccccccccchhhhcc---CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh
Q 007025 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 521 (621)
Q Consensus 445 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 521 (621)
+++..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .....+. .
T Consensus 288 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~i~---~ 359 (419)
T 3i6u_A 288 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQIT---S 359 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHHHH---T
T ss_pred cceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHHHh---c
Confidence 99876432 23344569999999999863 567889999999999999999999997432211 1111111 0
Q ss_pred hcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 522 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 522 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.... ..+.... ..++.+.+++.+||+.||++|||++|++++-
T Consensus 360 -~~~~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 360 -GKYN--FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp -TCCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred -CCCC--CCchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 0000 0000111 1236789999999999999999999999764
No 156
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-42 Score=351.84 Aligned_cols=259 Identities=24% Similarity=0.325 Sum_probs=188.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhh--cccccceeeEEEEecCC----ce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMTTT----ER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~ 371 (621)
.++|.+.+.||+|+||.||+|... ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 367999999999999999999875 889999998643 23456778888776 78999999999998776 78
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCceEEcccccCeEEecCCCceEEeec
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEYYEAVVGDF 443 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 443 (621)
++||||+++|+|.+++... .+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+||
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEEeccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 9999999999999999754 5888899999999999999999 76 9999999999999999999999999
Q ss_pred ccceecCCCCCce---eecccccccccchhhhccC------CCCCccchHhHHHHHHHHHhC----------CCCcccCc
Q 007025 444 GLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISG----------LRALEFGK 504 (621)
Q Consensus 444 gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvil~elltg----------~~p~~~~~ 504 (621)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997665433321 2234699999999999776 334689999999999999999 45554321
Q ss_pred ccccccchHHHHHHHhhhcchhhhccccccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCc
Q 007025 505 TANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 576 (621)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 576 (621)
...... ... ...+.........+ ......+.+++.+||+.||++|||+.|+++.|+.....
T Consensus 233 ~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 233 PSDPSV--EEM---------RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp C-CCCC--C-C---------HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCCccH--HHH---------HHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 111100 000 01111111222222 25567899999999999999999999999999976443
No 157
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.2e-41 Score=339.03 Aligned_cols=246 Identities=23% Similarity=0.341 Sum_probs=199.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLL 373 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 373 (621)
..++|++.+.||+|+||+||+|... +++.||||+++.... ......+.+|+..+..+ +||||+++++++...+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467889999999999999999976 789999999975432 23445788899999988 89999999999999999999
Q ss_pred EEeeccCCChhhhhccC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC--------------
Q 007025 374 VYPYMSNGSVASRLKAK----PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-------------- 435 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~~----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~-------------- 435 (621)
||||+++|+|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999753 6799999999999999999999999 99999999999999844
Q ss_pred -----CceEEeecccceecCCCCCceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccc
Q 007025 436 -----YEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQK 509 (621)
Q Consensus 436 -----~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~ 509 (621)
..+||+|||.+....... ...||..|+|||.+.+. .++.++|||||||++|||++|..++.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----
Confidence 479999999998765322 23489999999999876 566899999999999999999877643211
Q ss_pred cchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
. ..... ... ...+...+..+.+++.+||+.||++|||+.|++++-
T Consensus 237 ---~---~~~~~-~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 237 ---W---HEIRQ-GRL---------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp ---H---HHHHT-TCC---------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred ---H---HHHHc-CCC---------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 0 11111 100 111222346799999999999999999999998753
No 158
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9e-41 Score=360.82 Aligned_cols=265 Identities=18% Similarity=0.222 Sum_probs=197.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc-ccchhhHHHHHHHHHhhcccccceeeEEEEecC------C
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN-AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------T 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 369 (621)
.++|++.+.||+|+||+||+|... +++.||||++.... ......++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467899999999999999999865 68999999997543 222345788999999999999999999999654 3
Q ss_pred ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 370 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 56999999986 46666643 489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHH------------
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK------------ 517 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~------------ 517 (621)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.....
T Consensus 215 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred CCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 432 223446799999999999999999999999999999999999999975433221111111000
Q ss_pred ---HHhhh------cchhhhccccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 518 ---KIHQE------KKLEMLVDKDLKN---NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 518 ---~~~~~------~~~~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
..... ............. ........++.+|+.+||+.||++|||++|+++|-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 00000 0000000000000 01122357799999999999999999999999753
No 159
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.9e-41 Score=349.73 Aligned_cols=247 Identities=30% Similarity=0.385 Sum_probs=200.7
Q ss_pred cCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccc--hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
+.|...+.||+|+||+||+|.. .+++.||||++....... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4578889999999999999996 478999999997543222 2346889999999999999999999999999999999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+. |+|.+.+. ....+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 57877775 456799999999999999999999999 9999999999999999999999999999865432
Q ss_pred ceeecccccccccchhhhc---cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 455 HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
....||+.|+|||++. .+.++.++|||||||++|||+||+.||...... ........... +
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-------~~~~~~~~~~~------~ 271 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNES------P 271 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCC------C
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcCC------C
Confidence 2346999999999985 567899999999999999999999998643221 11111111110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
... ....++.+.+++.+||+.||++|||+++++++.
T Consensus 272 ~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 272 ALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 010 112236789999999999999999999998754
No 160
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.6e-41 Score=347.19 Aligned_cols=255 Identities=27% Similarity=0.388 Sum_probs=203.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEE------cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL------QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
.++|.+.+.||+|+||.||+|.+ .+++.||||.+..........++.+|+.++.+++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46789999999999999999984 247789999997554444556789999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceEEe
Q 007025 372 LLVYPYMSNGSVASRLKAK-------PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVG 441 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~-------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~ 441 (621)
++||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999754 3489999999999999999999999 9999999999999984 4569999
Q ss_pred ecccceecCCCCC-ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHH
Q 007025 442 DFGLAKLLDHCDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 442 Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
|||++........ .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-------EVLEFV 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-------HHHHHH
Confidence 9999975533222 22234558899999999999999999999999999999998 88998643221 111111
Q ss_pred hhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 520 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.... ....+...+..+.+++.+||+.||++||++.+++++|+.
T Consensus 259 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 259 TSGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hcCC----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 1111 011122234678999999999999999999999999975
No 161
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-40 Score=344.29 Aligned_cols=263 Identities=21% Similarity=0.261 Sum_probs=207.3
Q ss_pred cChHHHHHHhcCCCcC-CeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhc-ccccceeeEEE
Q 007025 289 FHFKELQSATSNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLA-VHRNLLRLIGF 364 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~~~ 364 (621)
..+...+...+.|.+. +.||+|+||.||+|... +++.||+|+++..... .....+.+|+.++..+ +||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3344555666778777 89999999999999976 5899999999754332 2345788999999988 46999999999
Q ss_pred EecCCceeEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceE
Q 007025 365 CMTTTERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAV 439 (621)
Q Consensus 365 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~k 439 (621)
+......++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 9999999999999999999999864 36799999999999999999999999 9999999999999997 78999
Q ss_pred EeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHH
Q 007025 440 VGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 440 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
|+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .....
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~~~~i 245 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-------TYLNI 245 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHH
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-------HHHHH
Confidence 99999998765322 2234569999999999999999999999999999999999999997533211 11111
Q ss_pred hhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 520 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.... ...........+..+.+++.+||+.||++|||++|++++-
T Consensus 246 ~~~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 246 SQVN-------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp HHTC-------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred Hhcc-------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 1000 0011111122346789999999999999999999998753
No 162
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.8e-41 Score=343.21 Aligned_cols=258 Identities=25% Similarity=0.385 Sum_probs=196.6
Q ss_pred HHHhcCCCcCCeeeeccccEEEEEEEc----CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCC
Q 007025 295 QSATSNFSSKNLVGKGGFGNVYKGYLQ----DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 369 (621)
Q Consensus 295 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 369 (621)
....++|.+.+.||+|+||.||+|... .+..||||+++..... .....+.+|+.++.+++||||+++++++....
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 345578889999999999999999864 2458999999754332 23456889999999999999999999998765
Q ss_pred c-----eeEEEeeccCCChhhhhc------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCce
Q 007025 370 E-----RLLVYPYMSNGSVASRLK------AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEA 438 (621)
Q Consensus 370 ~-----~~lv~e~~~~g~L~~~l~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 438 (621)
. .++||||+++|+|.+++. ....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3 499999999999999983 345799999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHH
Q 007025 439 VVGDFGLAKLLDHCDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWV 516 (621)
Q Consensus 439 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 516 (621)
||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ..
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~--- 259 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE----MY--- 259 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HH---
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH----HH---
Confidence 99999999866433222 2233457889999999999999999999999999999999 888886433211 11
Q ss_pred HHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 517 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 517 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....... ....+...+..+.+++.+||+.||++|||+.+++++|+.
T Consensus 260 ~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 260 DYLLHGH----------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHHHTTC----------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHcCC----------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111110 011122234679999999999999999999999999986
No 163
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2e-41 Score=354.74 Aligned_cols=267 Identities=21% Similarity=0.285 Sum_probs=206.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|... +++.||+|+++..........+.+|+.++..++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357889999999999999999976 6899999999765444445678999999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
|+++|+|.+++.....+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++...... .
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~ 186 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 186 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---c
Confidence 9999999999988778999999999999999999999831 7999999999999999999999999998754321 2
Q ss_pred eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccch---------------------HH-
Q 007025 457 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM---------------------LD- 514 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~---------------------~~- 514 (621)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||............ ..
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 23356999999999999999999999999999999999999999754321110000 00
Q ss_pred HHHHHhhhcc----hhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 515 WVKKIHQEKK----LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 515 ~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
+......... ...+.............+.++.+++.+||+.||++|||++|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000000 000000000000111234679999999999999999999999864
No 164
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.8e-40 Score=335.23 Aligned_cols=245 Identities=24% Similarity=0.384 Sum_probs=203.4
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEec--------
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT-------- 367 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------- 367 (621)
...+|++.+.||+|+||.||+|... +++.||+|+++... ..+.+|+.++..++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 3467889999999999999999986 78999999996542 356789999999999999999998854
Q ss_pred --------CCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc
Q 007025 368 --------TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 437 (621)
Q Consensus 368 --------~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 437 (621)
....++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 34578999999999999999643 5799999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHH
Q 007025 438 AVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 517 (621)
Q Consensus 438 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 517 (621)
+||+|||++....... ......||+.|+|||.+.+..++.++||||||+++|||++|..|+.... ....
T Consensus 161 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~ 229 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------KFFT 229 (284)
T ss_dssp EEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------HHHH
T ss_pred EEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------HHHH
Confidence 9999999998765432 2233469999999999999999999999999999999999998875211 1111
Q ss_pred HHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 518 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
... ...+... .+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 230 ~~~---------~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 230 DLR---------DGIISDI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHH---------TTCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred Hhh---------ccccccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111 1111112 235688999999999999999999999999863
No 165
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.5e-41 Score=338.82 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=206.0
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57888999999999999999976 578999999864321 222456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc---
Confidence 9999999999998777899999999999999999999999 9999999999999999999999999999765432
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... +.
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~-------~~---- 229 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------ETHRRIVNV-------DL---- 229 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTT-------CC----
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------HHHHHHhcc-------cc----
Confidence 223456899999999999999999999999999999999999999743221 111111110 01
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.++...+..+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1122234678999999999999999999999864
No 166
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.7e-40 Score=339.62 Aligned_cols=257 Identities=20% Similarity=0.230 Sum_probs=199.0
Q ss_pred cCCCcC-CeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 375 (621)
+.|.+. +.||+|+||.||+|... +++.||||+++... ......+.+|+.++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 567774 78999999999999964 68999999997543 23455788999999884 7999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc---eEEeecccceecCCC
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGLAKLLDHC 452 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~Dfgla~~~~~~ 452 (621)
||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 9999999999998877899999999999999999999999 9999999999999998766 999999998765322
Q ss_pred CC------ceeecccccccccchhhhcc-----CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccch--------H
Q 007025 453 DS------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM--------L 513 (621)
Q Consensus 453 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~--------~ 513 (621)
.. .......||+.|+|||++.. ..++.++|||||||++|||++|+.||............ .
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11223459999999999975 45789999999999999999999999764332211000 0
Q ss_pred HHHHHHhhhcchhhhccccccCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 514 DWVKKIHQEKKLEMLVDKDLKNNYDR----IELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 514 ~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.....+.. ... .++. ..+..+.+++.+||+.||++|||+.|++++-
T Consensus 248 ~~~~~i~~---------~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 248 MLFESIQE---------GKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp HHHHHHHH---------CCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred HHHHHHhc---------cCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 01111110 000 0111 1236789999999999999999999998753
No 167
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.4e-41 Score=349.93 Aligned_cols=267 Identities=22% Similarity=0.314 Sum_probs=203.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
++|++.+.||+|+||.||+|... +++.||||++....... ....+.+|+.++..++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888999999999999999976 58999999986544322 23457899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCce
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHV 456 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 456 (621)
|+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 180 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EV 180 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-cc
Confidence 999999999888777899999999999999999999999 99999999999999999999999999998654322 22
Q ss_pred eecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHH--------HHHHHhhhcchhh
Q 007025 457 TTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD--------WVKKIHQEKKLEM 527 (621)
Q Consensus 457 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 527 (621)
.....||..|+|||++.+. .++.++|||||||++|||++|+.||...........+.. +............
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 3345689999999999875 689999999999999999999999975433211111100 0000000111111
Q ss_pred hccccccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 528 LVDKDLKNNY-----DRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 528 ~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+...... .+..++.+.+++.+||+.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111111 11234779999999999999999999999864
No 168
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=8.2e-41 Score=374.04 Aligned_cols=247 Identities=27% Similarity=0.354 Sum_probs=199.7
Q ss_pred CeeeeccccEEEEEEEc---CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEeeccC
Q 007025 305 NLVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYMSN 380 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 380 (621)
+.||+|+||.||+|.+. .++.||||+++..... ....++.+|+.++.+++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999764 4678999999764332 234579999999999999999999999864 568899999999
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc--eee
Q 007025 381 GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH--VTT 458 (621)
Q Consensus 381 g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~--~~~ 458 (621)
|+|.+++.....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++........ ...
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999999888899999999999999999999999 9999999999999999999999999999876543322 222
Q ss_pred cccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCC
Q 007025 459 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY 537 (621)
Q Consensus 459 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 537 (621)
...+|+.|+|||++....++.++|||||||++|||+| |+.||...... +....+... .....
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~----------~~~~~ 593 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKG----------ERMGC 593 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTT----------CCCCC
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC----------CCCCC
Confidence 3347789999999999999999999999999999998 99999753321 111111111 11122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 538 DRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 538 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
+...+.++.+++.+||+.||++||++.+|++.|++
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 23345789999999999999999999999999975
No 169
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.9e-41 Score=339.96 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=207.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc--chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|.+.+.||+|+||.||++... +++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888999999999999999976 5789999998654322 2345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++++|.+++.....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999999999998777899999999999999999999999 999999999999999999999999999987643222
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||..|+|||.+.+..++.++||||||+++|+|++|+.||...... +.........
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~----------- 231 (294)
T 2rku_A 171 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKKNE----------- 231 (294)
T ss_dssp -CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTC-----------
T ss_pred -ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhhcc-----------
Confidence 233456899999999999988999999999999999999999999753221 1111111100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 01112233678999999999999999999999874
No 170
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2e-41 Score=341.48 Aligned_cols=255 Identities=24% Similarity=0.338 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEe--cCCceeE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTERLL 373 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~l 373 (621)
.++|++.+.||+|+||.||++... +++.||+|.+..... ......+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357889999999999999999976 689999999975432 223456889999999999999999999875 3567899
Q ss_pred EEeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-----eEEcccccCeEEecCCCceEEeecc
Q 007025 374 VYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPK-----IIHRDVKAANILLDEYYEAVVGDFG 444 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlkp~NILl~~~~~~kl~Dfg 444 (621)
||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999864 34599999999999999999999998 7 9999999999999999999999999
Q ss_pred cceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcc
Q 007025 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK 524 (621)
Q Consensus 445 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
+++...... .......|+..|+|||.+.+..++.++||||||+++|+|+||+.||...... .....+....
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~i~~~~- 232 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-------ELAGKIREGK- 232 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC-
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-------HHHHHHhhcc-
Confidence 998654322 1223346899999999999999999999999999999999999999753221 1111111111
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 525 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
. ...+...+.++.+++.+||+.||++|||+.|+++++...
T Consensus 233 ~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 233 F---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred c---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 0 111222346799999999999999999999999887653
No 171
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.1e-40 Score=343.01 Aligned_cols=259 Identities=20% Similarity=0.297 Sum_probs=208.2
Q ss_pred HHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-------hhhHHHHHHHHHhhc-ccccceeeE
Q 007025 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLA-VHRNLLRLI 362 (621)
Q Consensus 292 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l-~H~niv~l~ 362 (621)
.......++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.++.++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334555678999999999999999999986 69999999986543211 123578899999998 799999999
Q ss_pred EEEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEee
Q 007025 363 GFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 442 (621)
Q Consensus 363 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 442 (621)
+++......++||||+++++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEe
Confidence 99999999999999999999999998777899999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCceeecccccccccchhhhccC------CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHH
Q 007025 443 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV 516 (621)
Q Consensus 443 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~ 516 (621)
||++....... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... ...
T Consensus 244 fG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-------~~~ 314 (365)
T 2y7j_A 244 FGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-------LML 314 (365)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHH
T ss_pred cCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-------HHH
Confidence 99998765432 22345699999999998643 5788999999999999999999999643211 111
Q ss_pred HHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 517 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 517 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+..... . ........ .+..+.+++.+||+.||++|||+.|++++
T Consensus 315 ~~i~~~~~-~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 315 RMIMEGQY-Q--FSSPEWDD----RSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHTCC-C--CCHHHHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCC-C--CCCccccc----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111100 0 00000011 23568999999999999999999999975
No 172
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-40 Score=340.30 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=197.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.+|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 46888999999999999999964 689999999975332 223456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 376 PYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 376 e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999998863 56799999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ............. . +
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~-~-----~ 256 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCD-Y-----P 256 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHHTTC-S-----C
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhhccc-C-----C
Confidence 222 22334689999999999999999999999999999999999999964321 1112222211111 0 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.. .....+.++.+++.+||+.||++|||+.+|+++|+..
T Consensus 257 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 257 PL---PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp CC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00 0112336799999999999999999999999999863
No 173
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.6e-41 Score=337.69 Aligned_cols=247 Identities=28% Similarity=0.392 Sum_probs=197.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC-CceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-TERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 376 (621)
.++|++.+.||+|+||.||+|..+ |+.||||+++... ....+.+|+.++.+++||||+++++++... +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 467888999999999999999875 8899999996543 345788999999999999999999997654 47899999
Q ss_pred eccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997543 389999999999999999999999 9999999999999999999999999998754422
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ........ .
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-------~~~~~~~~----------~ 231 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKG----------Y 231 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-------HHHHHTTT----------C
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcC----------C
Confidence 122357889999999999999999999999999999998 999987432211 11111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 111222334779999999999999999999999999876
No 174
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.8e-40 Score=341.53 Aligned_cols=268 Identities=23% Similarity=0.309 Sum_probs=209.0
Q ss_pred ChHHHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhh--cccccceeeEEEEec
Q 007025 290 HFKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL--AVHRNLLRLIGFCMT 367 (621)
Q Consensus 290 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~ 367 (621)
.+..-....++|.+.+.||+|+||.||+|... ++.||||++... ....+.+|.+++.. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 34444556688999999999999999999985 899999998643 23467788888877 789999999999988
Q ss_pred CC----ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCceEEcccccCeEEecCC
Q 007025 368 TT----ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLH--------EQCDPKIIHRDVKAANILLDEY 435 (621)
Q Consensus 368 ~~----~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NILl~~~ 435 (621)
.. ..++||||+++|+|.+++... .+++..+..++.|++.||.||| +. +|+||||||+|||++.+
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 76 789999999999999999764 5899999999999999999999 66 99999999999999999
Q ss_pred CceEEeecccceecCCCCCce---eecccccccccchhhhccCC------CCCccchHhHHHHHHHHHhC----------
Q 007025 436 YEAVVGDFGLAKLLDHCDSHV---TTAVRGTVGHIAPEYLSTGQ------SSEKTDVFGFGILLLELISG---------- 496 (621)
Q Consensus 436 ~~~kl~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~------~~~~sDvwS~Gvil~elltg---------- 496 (621)
+.+||+|||++.......... .....||+.|+|||.+.+.. ++.++|||||||++|||+||
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 999999999998765443321 23446999999999997763 33689999999999999999
Q ss_pred CCCcccCcccccccchHHHHHHHhhhcchhhhccccccCC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 497 LRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 497 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
..||....... .....+....... ...+.+... ........+.+++.+||+.||++|||+.||+++|+..
T Consensus 264 ~~p~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 264 QLPYYDLVPSD--PSVEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CCTTTTTSCSS--CCHHHHHHHHTTS-----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCccccCcCc--ccHHHHHHHHHHH-----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 56665432211 1111222211111 111111111 1235667899999999999999999999999999863
No 175
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.6e-41 Score=346.40 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=207.0
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc--chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|.+.+.||+|+||.||++... +++.||+|++...... .....+.+|+.++..++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 56888999999999999999976 5789999998654322 23456889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~ 196 (335)
T 2owb_A 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-E 196 (335)
T ss_dssp CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-C
T ss_pred ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc-c
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999998765322 2
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
......||..|+|||++.+..++.++||||||+++|||++|+.||...... +......... .
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~-------~---- 258 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKKNE-------Y---- 258 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTC-------C----
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-------HHHHHHhcCC-------C----
Confidence 233456999999999999999999999999999999999999999743221 1111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+......+.+++.+||+.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0111223678999999999999999999999863
No 176
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.9e-41 Score=342.98 Aligned_cols=260 Identities=24% Similarity=0.304 Sum_probs=202.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEe----cCCcee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM----TTTERL 372 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~~ 372 (621)
.++|++.+.||+|+||.||++.. .+++.||||++.... ......+.+|+.+++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46788999999999999999997 478999999986532 234457889999999999999999999987 344788
Q ss_pred EEEeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 373 LVYPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999998874 46799999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCc--------eeecccccccccchhhhccCC---CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHH
Q 007025 449 LDHCDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 517 (621)
Q Consensus 449 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 517 (621)
....... ......||+.|+|||.+.... ++.++||||||+++|||++|+.||....... ......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~-- 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DSVALA-- 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SCHHHH--
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--chhhHH--
Confidence 4321100 012234799999999987554 6889999999999999999999986321110 011100
Q ss_pred HHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCc
Q 007025 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDGLA 576 (621)
Q Consensus 518 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 576 (621)
.. ...........+..+.+++.+||+.||.+|||+.+++++|+.....
T Consensus 260 -~~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 260 -VQ----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -HH----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -hh----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 00 0001111122346799999999999999999999999999876433
No 177
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=345.51 Aligned_cols=248 Identities=17% Similarity=0.197 Sum_probs=201.5
Q ss_pred HHhcCCCcCCeeeeccccEEEEEE------EcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcc---cccceeeEEEEe
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGY------LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLIGFCM 366 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~ 366 (621)
...++|.+.+.||+|+||+||+|. ..+++.||||+++... ..++..|+.++..++ |+||+++++++.
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 345778899999999999999994 4468899999996532 345777787777776 999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhc-----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC-------
Q 007025 367 TTTERLLVYPYMSNGSVASRLK-----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE------- 434 (621)
Q Consensus 367 ~~~~~~lv~e~~~~g~L~~~l~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~------- 434 (621)
..+..++||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999997 356799999999999999999999998 9999999999999998
Q ss_pred ----CCceEEeecccceecCC-CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccc
Q 007025 435 ----YYEAVVGDFGLAKLLDH-CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQK 509 (621)
Q Consensus 435 ----~~~~kl~Dfgla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~ 509 (621)
++.+||+|||+++.... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~- 293 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC- 293 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-
Confidence 89999999999976542 223344556799999999999999999999999999999999999999864322110
Q ss_pred cchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhhc
Q 007025 510 GAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLR-PKMSEVVRMLEG 572 (621)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~ 572 (621)
..... +.. ++ ..+.+.+++..|++.+|.+| |+++++.+.|++
T Consensus 294 --------------~~~~~----~~~-~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 294 --------------KPEGL----FRR-LP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp --------------EECSC----CTT-CS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred --------------eechh----ccc-cC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 00011 111 11 13668899999999999998 567777777664
No 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-40 Score=337.19 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=199.8
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEec----CCcee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTERL 372 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~ 372 (621)
..|.+.+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677789999999999999975 578999999875432 2234568899999999999999999998865 34579
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcccccCeEEec-CCCceEEeecccceec
Q 007025 373 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLD-EYYEAVVGDFGLAKLL 449 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NILl~-~~~~~kl~Dfgla~~~ 449 (621)
+||||+++|+|.+++.....+++..+..++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 9999999999999998877899999999999999999999998 7 99999999999998 7899999999999754
Q ss_pred CCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
... ......||+.|+|||.+. +.++.++||||||+++|+|++|+.||...... .............
T Consensus 183 ~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~---- 248 (290)
T 1t4h_A 183 RAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKP---- 248 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCC----
T ss_pred ccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH------HHHHHHHhccCCc----
Confidence 432 223456999999999886 56899999999999999999999999743221 1111111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.. .+...++++.+++.+||+.||++|||+.|++++
T Consensus 249 -~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 -AS----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GG----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -cc----cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01 111122578999999999999999999999975
No 179
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.6e-40 Score=351.51 Aligned_cols=200 Identities=25% Similarity=0.343 Sum_probs=169.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecC-----Cc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 370 (621)
.++|.+.+.||+|+||.||+|... +++.||||+++.... .....++.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999975 588999999975432 22345788999999999999999999999766 56
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 371 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
.++||||++ |+|.+++.....+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 899999987 59999999888899999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc---------------------eeecccccccccchhhh-ccCCCCCccchHhHHHHHHHHHhCCCCcc
Q 007025 451 HCDSH---------------------VTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELISGLRALE 501 (621)
Q Consensus 451 ~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~Gvil~elltg~~p~~ 501 (621)
..... ......||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 33211 12456699999999986 45669999999999999999998655554
No 180
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.8e-40 Score=362.30 Aligned_cols=254 Identities=23% Similarity=0.296 Sum_probs=206.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|...++||+|+||.||+|+.+ +|+.||+|++..... ......+.+|+.++..++||||+++++++......++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999986 689999999965321 22345688999999999999999999999999999999
Q ss_pred EeeccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 375 YPYMSNGSVASRLKA----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999864 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcc
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVD 530 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 530 (621)
.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..........
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~---~~~~~~i~~~-------- 408 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN---KELKQRVLEQ-------- 408 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH---HHHHHHHHHC--------
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH---HHHHHHHhhc--------
Confidence 4322 233457999999999999999999999999999999999999999754321111 1111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 007025 531 KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVRM 569 (621)
Q Consensus 531 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 569 (621)
. ..++...+..+.+++.+||+.||++||++ +++++|
T Consensus 409 -~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 409 -A--VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -c--cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 0 11222334778999999999999999975 566643
No 181
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=347.95 Aligned_cols=258 Identities=17% Similarity=0.193 Sum_probs=203.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcC---------CcEEEEEEeccCcccchhhHHHHHHHHHhhccccccee--------
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQD---------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR-------- 360 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~-------- 360 (621)
.++|.+.+.||+|+||.||+|.... ++.||||++... ..+.+|+.++.+++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 3678899999999999999999763 789999998643 35789999999999999988
Q ss_pred -------eEEEEec-CCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeE
Q 007025 361 -------LIGFCMT-TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANI 430 (621)
Q Consensus 361 -------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 430 (621)
+++++.. ....++||||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 6677765 67889999999 99999999865 6899999999999999999999999 999999999999
Q ss_pred EecCCC--ceEEeecccceecCCCCCc------eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCccc
Q 007025 431 LLDEYY--EAVVGDFGLAKLLDHCDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEF 502 (621)
Q Consensus 431 Ll~~~~--~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~ 502 (621)
|++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 9999999999865432211 11334699999999999999999999999999999999999999975
Q ss_pred CcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 503 GKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
..... ..+......... ....+.+.... ....+..+.+++.+||+.||++|||++++++.|+.
T Consensus 271 ~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 271 CLPNT--EDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp GTTCH--HHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred CCcCH--HHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 43111 111111111110 11111111000 00123679999999999999999999999999976
No 182
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=347.94 Aligned_cols=270 Identities=26% Similarity=0.393 Sum_probs=197.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHH--HhhcccccceeeEEEEec-----CCc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEM--ISLAVHRNLLRLIGFCMT-----TTE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~~~~~~-----~~~ 370 (621)
.++|++.+.||+|+||.||+|.. +++.||||+++... ...+..|.++ +..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 36788899999999999999987 58999999996432 2234444444 456899999999986542 235
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCceEEcccccCeEEecCCCceEEeecc
Q 007025 371 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC------DPKIIHRDVKAANILLDEYYEAVVGDFG 444 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlkp~NILl~~~~~~kl~Dfg 444 (621)
.++||||+++|+|.+++.... .++..+..++.|+++||.|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 689999999999999997654 589999999999999999999863 3389999999999999999999999999
Q ss_pred cceecCCCCC-------ceeecccccccccchhhhcc-------CCCCCccchHhHHHHHHHHHhCCCCcccCccccccc
Q 007025 445 LAKLLDHCDS-------HVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKG 510 (621)
Q Consensus 445 la~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~ 510 (621)
+++....... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987653221 12224469999999999976 346678999999999999999988876544322211
Q ss_pred chH-HHHHHHhhhcchhh-hccccccCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 511 AML-DWVKKIHQEKKLEM-LVDKDLKNNY------DRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 511 ~~~-~~~~~~~~~~~~~~-~~d~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
... .............. +........+ ....+..+.+++.+||+.||++|||++|+++.|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 111 00000000000000 0001111111 234567899999999999999999999999999873
No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.2e-40 Score=335.36 Aligned_cols=248 Identities=22% Similarity=0.343 Sum_probs=197.9
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|.+.+.||+|+||.||+|... +++.||||++.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888999999999999999986 68999999986432 1223447889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999998654322
Q ss_pred eeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ..........
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~----------- 227 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-------TLFKKIRGGV----------- 227 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC-----------
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------HHHHHhhcCc-----------
Confidence 2234468999999999987765 68999999999999999999999743221 1111111110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 228 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00112223678999999999999999999999975
No 184
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.1e-41 Score=351.33 Aligned_cols=275 Identities=19% Similarity=0.218 Sum_probs=201.5
Q ss_pred hHHHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccc----------hhhHHHHHHHHHhhccccccee
Q 007025 291 FKELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG----------GEIQFQTEVEMISLAVHRNLLR 360 (621)
Q Consensus 291 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~H~niv~ 360 (621)
.+++....++|.+.+.||+|+||.||+|...+|+.||||++....... ....+.+|+.++.+++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567788899999999999999999999998889999999986533221 1257899999999999999999
Q ss_pred eEEEEec-----CCceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC
Q 007025 361 LIGFCMT-----TTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE 434 (621)
Q Consensus 361 l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~ 434 (621)
+++++.. ....++||||++ |+|.+.+... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 9999854 335799999998 5888777644 4799999999999999999999999 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchH
Q 007025 435 YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML 513 (621)
Q Consensus 435 ~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~ 513 (621)
++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+.
T Consensus 170 ~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999999754322 22334568999999999877 678999999999999999999999997543221111111
Q ss_pred HHHHHHh-------hhcchhhhcccccc-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007025 514 DWVKKIH-------QEKKLEMLVDKDLK-------NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571 (621)
Q Consensus 514 ~~~~~~~-------~~~~~~~~~d~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 571 (621)
....... .............. ....+...+.+.+++.+||+.||++|||+.|++++--
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 1000000 00000000000000 0011122467899999999999999999999997543
No 185
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.1e-40 Score=354.28 Aligned_cols=195 Identities=23% Similarity=0.364 Sum_probs=156.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecC-----Cc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 370 (621)
.++|++.+.||+|+||+||+|... +++.||||++..... .....++.+|+.++..++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999965 689999999865432 22345788999999999999999999998543 56
Q ss_pred eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 371 RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
.++||||+. |+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 899999985 69999998888899999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC--------------------------ceeecccccccccchhhh-ccCCCCCccchHhHHHHHHHHHhC
Q 007025 451 HCDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELISG 496 (621)
Q Consensus 451 ~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~Gvil~elltg 496 (621)
.... .......||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 3211 112345689999999986 456799999999999999999994
No 186
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2e-41 Score=356.98 Aligned_cols=241 Identities=13% Similarity=0.111 Sum_probs=190.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCc--ccchhhHHHHHHH---HHhhcccccceeeE-------EE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGN--AIGGEIQFQTEVE---MISLAVHRNLLRLI-------GF 364 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~---~l~~l~H~niv~l~-------~~ 364 (621)
.++|.+.+.||+|+||+||+|.. .+|+.||||+++... .......+.+|+. .++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 469999999997432 2234457889994 55566899999998 66
Q ss_pred EecCC-----------------ceeEEEeeccCCChhhhhccCCCCC-------HHHHHHHHHHHHHHHHHHhhcCCCce
Q 007025 365 CMTTT-----------------ERLLVYPYMSNGSVASRLKAKPSLD-------WATRKRIALGAARGLLYLHEQCDPKI 420 (621)
Q Consensus 365 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~l~-------~~~~~~i~~~ia~~L~~LH~~~~~~i 420 (621)
+...+ ..++||||+ +|+|.+++...+.++ +..+..++.||+.||.|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55543 278999999 689999997543343 488889999999999999999 99
Q ss_pred EEcccccCeEEecCCCceEEeecccceecCCCCCceeecccccccccchhhhccC-----------CCCCccchHhHHHH
Q 007025 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGIL 489 (621)
Q Consensus 421 vH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwS~Gvi 489 (621)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986332 3344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 490 LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 490 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
+|||+||+.||......... ..+... .... ++++.+++.+||+.||++|||+.|++++
T Consensus 303 l~elltg~~Pf~~~~~~~~~----------------~~~~~~--~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS----------------EWIFRS--CKNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHSSCCC------CCS----------------GGGGSS--CCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHCCCCCcccccccch----------------hhhhhh--ccCC----CHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999999999743321111 111110 0122 3678999999999999999999999864
No 187
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.7e-41 Score=342.80 Aligned_cols=261 Identities=27% Similarity=0.368 Sum_probs=187.5
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
...++|.+.+.||+|+||.||+|... +++.||||++...........+.+|+.++..++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999864 68999999987554444455788999999999999999999999999999999
Q ss_pred EeeccCCChhhhhcc--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccc
Q 007025 375 YPYMSNGSVASRLKA--------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA 446 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla 446 (621)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999863 45699999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC----ceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh
Q 007025 447 KLLDHCDS----HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 521 (621)
Q Consensus 447 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 521 (621)
........ .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ .......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~ 242 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV------LMLTLQN 242 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH------HHHHHTS
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH------HHHHhcc
Confidence 76543221 12234568999999999976 5689999999999999999999999975432111 0111110
Q ss_pred hc-ch-hhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 522 EK-KL-EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 522 ~~-~~-~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.. .. ....+...... .+..+.+++.+||+.||.+|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKK----YGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp SCCCTTC-----CCCCC----CCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCccccccccchhhhh----hhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 00 01111111122 23678999999999999999999999875
No 188
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-40 Score=348.34 Aligned_cols=263 Identities=22% Similarity=0.278 Sum_probs=197.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCC------
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------ 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 369 (621)
.++|...+.||+|+||.||+|... +|+.||||++...... ....++.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357888999999999999999975 6899999999654322 23456889999999999999999999997653
Q ss_pred ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 370 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
..++||||+ +++|.+++.. ..+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 459999999 7899999876 4699999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHH--------HHHHh
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDW--------VKKIH 520 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~ 520 (621)
... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...........+... ...+.
T Consensus 179 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 179 DSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp CSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred ccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 432 234568999999999987 67999999999999999999999999754332111111100 00000
Q ss_pred hh---c---chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 521 QE---K---KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 521 ~~---~---~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.. . .+.......+ .......++.+.+++.+||+.||++|||+.|+++|-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred hHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 00 0 0000000000 011122346789999999999999999999999854
No 189
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.6e-40 Score=358.30 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=206.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
.++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+|+.++++++||||+++++++......++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457889999999999999999976 689999999965432 23455789999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~~ 451 (621)
|||+.+|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999998888899999999999999999999999 99999999999999 5678999999999987654
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.. ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+....... ..
T Consensus 182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~~---~~ 248 (484)
T 3nyv_A 182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-------DILKKVEKGKYTF---EL 248 (484)
T ss_dssp CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCC---CS
T ss_pred cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHcCCCCC---CC
Confidence 32 2334569999999999865 7899999999999999999999999753321 1111211111000 00
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.. ....++.+.+++.+||+.||++|||+.|+++|
T Consensus 249 ~~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 249 PQ----WKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GG----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00 11234678999999999999999999999863
No 190
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.5e-40 Score=345.21 Aligned_cols=264 Identities=23% Similarity=0.329 Sum_probs=200.3
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecC--------
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-------- 368 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-------- 368 (621)
++|++.+.||+|+||.||+|... +|+.||||++...... .....+.+|+.++..++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57889999999999999999974 7899999998654332 2344688999999999999999999998763
Q ss_pred CceeEEEeeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccce
Q 007025 369 TERLLVYPYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~ 447 (621)
+..++||||+++ +|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 467999999986 66666654 46799999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC---ceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 448 LLDHCDS---HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 448 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
....... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~ 248 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ----LALISQLCGSI 248 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCC
Confidence 7653221 22234568999999999876 4589999999999999999999999975432211 11111110000
Q ss_pred c---hhhhccccc----------cCCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 524 K---LEMLVDKDL----------KNNYDR-----IELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 524 ~---~~~~~d~~~----------~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
. ......... ...... ...+.+.+++.+||+.||++|||++|++++-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 0 000000000 000000 0135688999999999999999999999753
No 191
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-39 Score=356.82 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=203.0
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc------------chhhHHHHHHHHHhhcccccceeeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI------------GGEIQFQTEVEMISLAVHRNLLRLIG 363 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~H~niv~l~~ 363 (621)
..++|.+.+.||+|+||+||+|... +++.||||+++..... .....+.+|+.+++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3567999999999999999999976 5789999999754321 22456889999999999999999999
Q ss_pred EEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC---ceEE
Q 007025 364 FCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY---EAVV 440 (621)
Q Consensus 364 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~kl 440 (621)
++......++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEE
Confidence 9999999999999999999999998778899999999999999999999999 999999999999998775 6999
Q ss_pred eecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHh
Q 007025 441 GDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520 (621)
Q Consensus 441 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 520 (621)
+|||+++..... .......||+.|+|||++. +.++.++|||||||++|+|++|+.||...... .....+.
T Consensus 191 ~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~ 260 (504)
T 3q5i_A 191 VDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-------DIIKKVE 260 (504)
T ss_dssp CCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHH
T ss_pred EECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHH
Confidence 999999876543 2233456999999999986 56899999999999999999999999753321 1111211
Q ss_pred hhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 521 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..... .+...... .+.++.+++.+||+.||.+|||+.|++++
T Consensus 261 ~~~~~---~~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 261 KGKYY---FDFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HCCCC---CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCCC---CCccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11100 00000111 23678999999999999999999999864
No 192
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.1e-39 Score=337.22 Aligned_cols=258 Identities=17% Similarity=0.236 Sum_probs=200.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-cccceeeEEEEec--CCceeEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMT--TTERLLV 374 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lv 374 (621)
++|++.+.||+|+||+||+|... +++.||||+++.. ....+.+|+.++..++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 67889999999999999999864 6899999999643 2457889999999997 9999999999987 5678999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC-ceEEeecccceecCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY-EAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~Dfgla~~~~~~~ 453 (621)
|||+++++|.+++.. +++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 112 ~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp EECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred EeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 999999999998863 88999999999999999999999 999999999999999776 89999999998765432
Q ss_pred Cceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc---------
Q 007025 454 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK--------- 523 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 523 (621)
. .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .+...........
T Consensus 186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH--HHHHHHHHHCHHHHHHHHHHTT
T ss_pred c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH--HHHHHHHhcCCchhhhHHHHhc
Confidence 2 234568999999999977 6689999999999999999999999964332111 0111111000000
Q ss_pred -----chhhhcc--------ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 524 -----KLEMLVD--------KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 524 -----~~~~~~d--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
....... ...........+.++.+++.+||+.||++|||++|++++-
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0000000 0000111112357899999999999999999999999754
No 193
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-39 Score=336.25 Aligned_cols=255 Identities=23% Similarity=0.318 Sum_probs=199.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-------cchhhHHHHHHHHHhhcccccceeeEEEEecC
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT 368 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 368 (621)
..++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+|+.++..++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467899999999999999999975 578999999865321 11223588999999999999999999998765
Q ss_pred CceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc---eEEeeccc
Q 007025 369 TERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFGL 445 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~Dfgl 445 (621)
. .++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 4 899999999999999998888899999999999999999999999 9999999999999987654 99999999
Q ss_pred ceecCCCCCceeecccccccccchhhhc---cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhh
Q 007025 446 AKLLDHCDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE 522 (621)
Q Consensus 446 a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 522 (621)
++..... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... .+...+.. .
T Consensus 164 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~---~ 235 (322)
T 2ycf_A 164 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQITS---G 235 (322)
T ss_dssp CEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHHH---T
T ss_pred ceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHHh---C
Confidence 9876432 2223456999999999974 4568999999999999999999999997533211 11111111 0
Q ss_pred cchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 523 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 523 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
... ..+.... ..+..+.+++.+||+.||++|||+.|++++-
T Consensus 236 -~~~--~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 236 -KYN--FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp -CCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred -ccc--cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence 000 0001111 1236789999999999999999999998753
No 194
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-40 Score=345.73 Aligned_cols=267 Identities=23% Similarity=0.285 Sum_probs=198.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc----hhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG----GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
..++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.++..++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4568999999999999999999975 58999999997533221 123688999999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++||||+++ +|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999986 888887654 4689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh---hcchh
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ---EKKLE 526 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 526 (621)
... .......||+.|+|||++.+. .++.++|||||||++|||++|..||......... ......... ..+..
T Consensus 164 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 164 SPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL---TRIFETLGTPTEEQWPD 239 (346)
T ss_dssp SCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCTTTSSS
T ss_pred CCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHHHcCCCChhhhhh
Confidence 322 223345689999999999764 4789999999999999999999998754321111 111111100 00000
Q ss_pred --hhccc---cccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007025 527 --MLVDK---DLKNNYD-----RIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571 (621)
Q Consensus 527 --~~~d~---~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 571 (621)
...+. ......+ ...+.++.+++.+||+.||++|||+.|++++--
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 00000 0000001 223467999999999999999999999998643
No 195
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-40 Score=336.99 Aligned_cols=263 Identities=20% Similarity=0.299 Sum_probs=200.8
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
++|++.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999976 6899999998654322 223568899999999999999999999999999999999
Q ss_pred eccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 377 YMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 377 ~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|++ |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 998 5999998754 5689999999999999999999999 99999999999999999999999999997654322
Q ss_pred ceeecccccccccchhhhccCC-CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcc--hhhh---
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKK--LEML--- 528 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 528 (621)
.......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||......+. ............. ....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ---LFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGS
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCchhhhhHhhcC
Confidence 1223345899999999998765 79999999999999999999999975432111 1111111100000 0000
Q ss_pred --cccccc----CC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 529 --VDKDLK----NN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 529 --~d~~~~----~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+... .. ..+..++++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 00 011234678999999999999999999999974
No 196
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.5e-40 Score=337.21 Aligned_cols=256 Identities=29% Similarity=0.372 Sum_probs=197.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc--CCc--EEEEEEeccCcc--cchhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ--DGT--VVAVKRLKDGNA--IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
.++|++.+.||+|+||+||+|.+. +++ .||||+++.... ......+.+|+.++..++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999864 233 689999875432 233457899999999999999999999998755 8
Q ss_pred eEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++|+||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999998753 5699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCce--eecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhh
Q 007025 451 HCDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 451 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
...... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..........
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~---- 241 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-------QILHKIDKEG---- 241 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTSC----
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-------HHHHHHHccC----
Confidence 443322 223457889999999999889999999999999999999 99999743221 1111111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.....+...+..+.+++.+||+.||++|||+.+++++|++.
T Consensus 242 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 242 -----ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 01111222347799999999999999999999999999864
No 197
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=339.99 Aligned_cols=266 Identities=23% Similarity=0.346 Sum_probs=206.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-----cCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCC--c
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT--E 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~ 370 (621)
.++|++.+.||+|+||.||++.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 35688899999999999999984 368899999997543 334457899999999999999999999987654 6
Q ss_pred eeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 371 RLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 79999999999999999864 4699999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCce--eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCccccc----ccchHHHHHHHhhhc
Q 007025 450 DHCDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ----KGAMLDWVKKIHQEK 523 (621)
Q Consensus 450 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~ 523 (621)
....... .....++..|+|||.+.+..++.++||||||+++|||+||..|+........ ......+.. .
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 270 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV-----F 270 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHH-----H
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhH-----H
Confidence 5443322 1234477889999999998899999999999999999999998863211000 000000000 0
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEG 572 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 572 (621)
.+...+........+...+.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0001111111111223345789999999999999999999999999875
No 198
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-39 Score=355.90 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=201.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|++.+.||+|+||+||+|... ++..||+|+++.... ......+.+|+.+++.++||||+++++++......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356888999999999999999976 688999999975432 233457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceEEeecccceecCCC
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~Dfgla~~~~~~ 452 (621)
||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999999999998778899999999999999999999999 9999999999999975 455999999999876543
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
.......||+.|+|||++. +.++.++|||||||++|+|++|+.||...... .....+..... ..+..
T Consensus 193 --~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~---~~~~~ 259 (494)
T 3lij_A 193 --KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-------EILRKVEKGKY---TFDSP 259 (494)
T ss_dssp --BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCC---CCCSG
T ss_pred --ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCC---CCCch
Confidence 2233456999999999986 56899999999999999999999999753321 11122111110 00111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
... ..+..+.+++.+||+.||++|||+.|++++
T Consensus 260 ~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 260 EWK----NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GGT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred hcc----cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111 223678999999999999999999999864
No 199
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.9e-40 Score=356.11 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc-ccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN-AIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|++.+.||+|+||+||+|... +++.||||++.... .......+.+|+.++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999976 68999999986432 2233457889999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec---CCCceEEeecccceecCCC
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD---EYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~Dfgla~~~~~~ 452 (621)
||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999999999998777899999999999999999999999 999999999999995 5667999999999865432
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
.......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... +....+...... .+..
T Consensus 178 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~---~~~~ 244 (486)
T 3mwu_A 178 --TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-------DILKRVETGKYA---FDLP 244 (486)
T ss_dssp ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCC---SCSG
T ss_pred --CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCC---CCCc
Confidence 22334569999999999875 5899999999999999999999999753221 111222111100 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
. ....+.++.+++.+||+.||++|||+.|++++
T Consensus 245 ~----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 Q----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 11224678999999999999999999999975
No 200
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=332.16 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=197.9
Q ss_pred CCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEeec
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYPYM 378 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 378 (621)
+|....+||+|+||.||+|... +++.||||.+.... ......+.+|+.++..++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455569999999999999964 68899999987543 233457889999999999999999999999999999999999
Q ss_pred cCCChhhhhccC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC-CCceEEeecccceecCCCCC
Q 007025 379 SNGSVASRLKAK---PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-YYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 379 ~~g~L~~~l~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~Dfgla~~~~~~~~ 454 (621)
++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999998754 3567899999999999999999999 9999999999999987 89999999999987653221
Q ss_pred ceeecccccccccchhhhccCC--CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
......||..|+|||++.+.. ++.++||||||+++|||++|+.||....... ........ . .
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~-~---------~ 242 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGM-F---------K 242 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHH-H---------C
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhcc-c---------c
Confidence 223456899999999997654 7899999999999999999999996422110 00000000 0 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.....+...+.++.+++.+||+.||++||++.|++++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111222334678999999999999999999999864
No 201
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-40 Score=351.26 Aligned_cols=264 Identities=20% Similarity=0.280 Sum_probs=196.6
Q ss_pred HHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC-----
Q 007025 295 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT----- 368 (621)
Q Consensus 295 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 368 (621)
+...++|.+.+.||+|+||+||+|... +|+.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 345678999999999999999999964 789999999865432 234799999999999999999998543
Q ss_pred ---------------------------------CceeEEEeeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHH
Q 007025 369 ---------------------------------TERLLVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLY 411 (621)
Q Consensus 369 ---------------------------------~~~~lv~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~L~~ 411 (621)
...++||||+++ +|.+.+. ....+++..+..++.||++||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 337899999984 7766654 45689999999999999999999
Q ss_pred HhhcCCCceEEcccccCeEEec-CCCceEEeecccceecCCCCCceeecccccccccchhhhccC-CCCCccchHhHHHH
Q 007025 412 LHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGIL 489 (621)
Q Consensus 412 LH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvi 489 (621)
||+. +|+||||||+|||++ .++.+||+|||+++...... ......||..|+|||.+.+. .++.++|||||||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999998 68999999999998765332 22345689999999998775 48999999999999
Q ss_pred HHHHHhCCCCcccCcccccccchHHHHH--------HHhhh---cchhhhccccccCCCCHHHHHHHHHHHHHccCCCCC
Q 007025 490 LLELISGLRALEFGKTANQKGAMLDWVK--------KIHQE---KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPS 558 (621)
Q Consensus 490 l~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~ 558 (621)
+|||++|+.||......+....+..... ..... ..............++...+..+.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999999999975433221111111000 00000 000000001111112223446799999999999999
Q ss_pred CCCCHHHHHHH
Q 007025 559 LRPKMSEVVRM 569 (621)
Q Consensus 559 ~RPs~~evl~~ 569 (621)
+|||+.|+++|
T Consensus 312 ~R~t~~e~l~h 322 (383)
T 3eb0_A 312 LRINPYEAMAH 322 (383)
T ss_dssp GSCCHHHHHTS
T ss_pred hCCCHHHHhcC
Confidence 99999999864
No 202
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.9e-40 Score=336.15 Aligned_cols=252 Identities=20% Similarity=0.249 Sum_probs=186.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhH-HHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|++.+.||+|+||+||+|... +++.||||+++.........+ +.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467889999999999999999974 689999999976543333333 444455578889999999999999999999999
Q ss_pred eeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 376 PYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 376 e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
||+++ +|.+++. ....+++..+..++.|++.||.|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99984 8877764 3568999999999999999999999853 899999999999999999999999999986643
Q ss_pred CCCceeecccccccccchhhh----ccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhh
Q 007025 452 CDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM 527 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (621)
.. ......||+.|+|||.+ .+..++.++||||||+++|||+||+.||...... ............
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~--- 231 (290)
T 3fme_A 163 DV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS--- 231 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC---
T ss_pred cc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch------HHHHHHHhccCC---
Confidence 22 22334699999999996 4567899999999999999999999999742221 111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 528 LVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 528 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........+.++.+++.+||+.||++|||+.|++++
T Consensus 232 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 232 ------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 000111234678999999999999999999999863
No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.2e-40 Score=373.02 Aligned_cols=251 Identities=23% Similarity=0.284 Sum_probs=207.6
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCc--ccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCcee
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERL 372 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 372 (621)
..++|++.++||+|+||.||+|..+ +++.||||+++... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999976 58899999997532 222344677889998877 7999999999999999999
Q ss_pred EEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCC
Q 007025 373 LVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHC 452 (621)
Q Consensus 373 lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~ 452 (621)
+||||+++|+|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999999999878899999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccc
Q 007025 453 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKD 532 (621)
Q Consensus 453 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 532 (621)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....+.. ..
T Consensus 496 -~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-------~~~~~i~~---------~~ 558 (674)
T 3pfq_A 496 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-------ELFQSIME---------HN 558 (674)
T ss_dssp -TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHS---------SC
T ss_pred -CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-------HHHHHHHh---------CC
Confidence 22344567999999999999999999999999999999999999999753221 11111111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 007025 533 LKNNYDRIELEEMVQVALLCTQYLPSLRPKM-----SEVVRM 569 (621)
Q Consensus 533 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 569 (621)
..++...+.++.+|+.+||+.||++||++ +||++|
T Consensus 559 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 559 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred --CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 11233345789999999999999999997 777654
No 204
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=346.89 Aligned_cols=251 Identities=24% Similarity=0.280 Sum_probs=184.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-cccceeeEEEEe--------c
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCM--------T 367 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~--------~ 367 (621)
..+|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 457889999999999999999975 68999999985443 233456889999999996 999999999984 3
Q ss_pred CCceeEEEeeccCCChhhhhcc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCc--eEEcccccCeEEecCCCceEEee
Q 007025 368 TTERLLVYPYMSNGSVASRLKA---KPSLDWATRKRIALGAARGLLYLHEQCDPK--IIHRDVKAANILLDEYYEAVVGD 442 (621)
Q Consensus 368 ~~~~~lv~e~~~~g~L~~~l~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NILl~~~~~~kl~D 442 (621)
....++||||+. |+|.+++.. ...+++..+..++.||+.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 344789999996 699888763 56799999999999999999999998 7 99999999999999999999999
Q ss_pred cccceecCCCCCce-----------eecccccccccchhhh---ccCCCCCccchHhHHHHHHHHHhCCCCcccCccccc
Q 007025 443 FGLAKLLDHCDSHV-----------TTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 508 (621)
Q Consensus 443 fgla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~ 508 (621)
||+++......... .....||+.|+|||++ .+..++.++|||||||++|||+||+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 99998765432211 1134589999999998 56678899999999999999999999996432210
Q ss_pred ccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 509 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
.. ...............+.+++.+||+.||++|||+.|++++|+..
T Consensus 261 ------~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 261 ------IV-------------NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ------hh-------------cCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00 00000000111124578999999999999999999999999864
No 205
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.2e-40 Score=338.46 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=204.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 376 (621)
.++|.+.+.||+|+||.||++... +|+.||+|.++.... .....+.+|+.++..++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 457888999999999999999976 689999999975432 233468899999999999999999999999999999999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecCCCC
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~~~~ 453 (621)
|+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 999999999998777899999999999999999999999 99999999999999 78899999999999754322
Q ss_pred CceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccc
Q 007025 454 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDL 533 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 533 (621)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+..... ..
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~~-------~~ 226 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-------KLFEKIKEGYY-------EF 226 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHCCC-------CC
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHcCCC-------CC
Confidence 223345899999999999999999999999999999999999999743221 11111111100 00
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 534 KNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 534 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........+..+.+++.+||+.||++|||+.|++++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011112234679999999999999999999999974
No 206
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-39 Score=341.51 Aligned_cols=268 Identities=21% Similarity=0.263 Sum_probs=203.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC-----Cce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 371 (621)
..+|++.+.||+|+||.||+|... +++.||||++...........+.+|+.++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999975 68899999997544444446789999999999999999999999755 367
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
++||||++ |+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 99999998 5899988764 599999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCce--eecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhh------
Q 007025 452 CDSHV--TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE------ 522 (621)
Q Consensus 452 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 522 (621)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........+
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 22211 234569999999998765 458999999999999999999999997544322211111100000000
Q ss_pred -----cchhhhcccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 523 -----KKLEMLVDKDLK--NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 523 -----~~~~~~~d~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
........+... ....+..+.++.+++.+||+.||++|||+.|++++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000000000 000112246789999999999999999999999754
No 207
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=335.08 Aligned_cols=251 Identities=23% Similarity=0.334 Sum_probs=201.0
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||.||+|... +|+.||||.+.... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4567999999999999999999976 58999999997543 2346889999999999999999999999999999999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 9999999999987 456799999999999999999999999 999999999999999999999999999987653222
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhcccccc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLK 534 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 534 (621)
......||..|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... . +..
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~-~-----~~~- 245 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMIPTNP-P-----PTF- 245 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC-C-----CCC-
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCC-C-----ccc-
Confidence 223456899999999999999999999999999999999999999743221 1111111100 0 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 535 NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 535 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
..+...+..+.+++.+||+.||++|||+.+++++
T Consensus 246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111223678999999999999999999999863
No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.3e-40 Score=350.14 Aligned_cols=255 Identities=10% Similarity=0.000 Sum_probs=183.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc--chhhHHHHHHHHHhhc--ccccceeeE-------EEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--GGEIQFQTEVEMISLA--VHRNLLRLI-------GFC 365 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l--~H~niv~l~-------~~~ 365 (621)
..+|...+.||+|+||.||+|.+. +++.||||+++..... .....+.+|+.++..+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 445888999999999999999975 7899999999765432 2334677886555544 699988755 444
Q ss_pred ecC-----------------CceeEEEeeccCCChhhhhccC-CCCCHHHH------HHHHHHHHHHHHHHhhcCCCceE
Q 007025 366 MTT-----------------TERLLVYPYMSNGSVASRLKAK-PSLDWATR------KRIALGAARGLLYLHEQCDPKII 421 (621)
Q Consensus 366 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~iv 421 (621)
... ...++||||++ |+|.+++... ..+.+..+ ..++.||+.||.|||++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 332 23799999999 8999999752 34555566 78889999999999999 999
Q ss_pred EcccccCeEEecCCCceEEeecccceecCCCCCceeecccccccccchhhhcc--CCCCCccchHhHHHHHHHHHhCCCC
Q 007025 422 HRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRA 499 (621)
Q Consensus 422 H~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvil~elltg~~p 499 (621)
||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999986542 2224557799999999987 6799999999999999999999999
Q ss_pred cccCcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 500 LEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
|.......... . .....................++.+.+++.+||+.||++|||+.|++++
T Consensus 293 f~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 293 FGLVTPGIKGS-W--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TTBCCTTCTTC-C--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCcCcccccc-h--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 98543211100 0 0000000001111111112334789999999999999999999999863
No 209
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-40 Score=343.48 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=206.0
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccch----------------hhHHHHHHHHHhhcccccceee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGG----------------EIQFQTEVEMISLAVHRNLLRL 361 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~e~~~l~~l~H~niv~l 361 (621)
.++|.+.+.||+|+||.||+|.. +++.||||.+........ ...+.+|+.++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788999999999999999999 899999999964322111 1678999999999999999999
Q ss_pred EEEEecCCceeEEEeeccCCChhhh------hcc--CCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceEEcccccCeEEe
Q 007025 362 IGFCMTTTERLLVYPYMSNGSVASR------LKA--KPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILL 432 (621)
Q Consensus 362 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~--~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NILl 432 (621)
++++...+..++||||+++|+|.++ +.. ...+++..+..++.|++.||.|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 665 5689999999999999999999998 8 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCceeecccccccccchhhhccC-CCCC-ccchHhHHHHHHHHHhCCCCcccCccccccc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGILLLELISGLRALEFGKTANQKG 510 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwS~Gvil~elltg~~p~~~~~~~~~~~ 510 (621)
+.++.+||+|||.+...... ......|+..|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999876432 33445699999999999887 5665 999999999999999999999754321
Q ss_pred chHHHHHHHhhhcchhhhcc------c---cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 511 AMLDWVKKIHQEKKLEMLVD------K---DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~d------~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
........... .....+ + ..........+..+.+++.+||+.||.+|||+.|++++-
T Consensus 259 --~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 259 --VELFNNIRTKN-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp --HHHHHHHTSCC-CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred --HHHHHHHhccC-cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11111111110 000000 0 000000122347789999999999999999999999753
No 210
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=342.18 Aligned_cols=260 Identities=27% Similarity=0.366 Sum_probs=199.9
Q ss_pred ccChHHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEE
Q 007025 288 RFHFKELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFC 365 (621)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~ 365 (621)
.+.+.++....++|++.+.||+|+||.||+|... +++.||||++.... .....+.+|+.++.++ +||||+++++++
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 3444555566788999999999999999999974 68999999986443 2345788999999998 799999999999
Q ss_pred ec------CCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc
Q 007025 366 MT------TTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE 437 (621)
Q Consensus 366 ~~------~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 437 (621)
.. ....++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 76 46789999999999999999753 5799999999999999999999999 9999999999999999999
Q ss_pred eEEeecccceecCCCCCceeecccccccccchhhhc-----cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccch
Q 007025 438 AVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM 512 (621)
Q Consensus 438 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~ 512 (621)
+||+|||++....... .......||..|+|||++. ...++.++|||||||++|+|+||+.||......
T Consensus 168 ~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------ 240 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------ 240 (326)
T ss_dssp EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------
T ss_pred EEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------
Confidence 9999999998654321 1223446899999999997 567899999999999999999999999643221
Q ss_pred HHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 513 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 513 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.......... . +... ....+..+.+++.+||+.||++||++.+++++
T Consensus 241 -~~~~~~~~~~-~-----~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 -RALFLIPRNP-A-----PRLK---SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp -HHHHHHHHSC-C-----CCCS---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -HHHHHhhcCc-c-----ccCC---ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111110 0 0010 11123678999999999999999999999974
No 211
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.5e-40 Score=343.55 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=199.5
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHH-HhhcccccceeeEEEEecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEM-ISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
..++|++.+.||+|+||.||+|... +|+.||||+++.........++..|... +..++||||+++++++...+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 3467888899999999999999974 6899999999765444444556666665 6788999999999999999999999
Q ss_pred EeeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 375 YPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 375 ~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
|||+++ +|.+++. ....+++..+..++.||+.||.|||+.. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999985 8888876 4568999999999999999999999742 89999999999999999999999999998664
Q ss_pred CCCCceeecccccccccchhhhcc----CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
.. .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... ...+........
T Consensus 206 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~-- 275 (340)
T 3an0_A 206 DS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS-- 275 (340)
T ss_dssp CH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC--
T ss_pred cc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCC--
Confidence 21 22233469999999999743 46899999999999999999999999743211 111111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 527 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
+.. .....+.++.+++.+||+.||++|||+.|++++
T Consensus 276 ----~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 ----PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----CCC---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----CCC---CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 000 011224679999999999999999999999863
No 212
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.3e-40 Score=332.95 Aligned_cols=254 Identities=22% Similarity=0.253 Sum_probs=205.4
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCccc--------chhhHHHHHHHHHhhcc-cccceeeEEEEe
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAI--------GGEIQFQTEVEMISLAV-HRNLLRLIGFCM 366 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~e~~~l~~l~-H~niv~l~~~~~ 366 (621)
..++|++.+.||+|+||.||+|... +++.||||+++..... .....+.+|+.++.++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3468899999999999999999976 6899999999654311 12346788999999995 999999999999
Q ss_pred cCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccc
Q 007025 367 TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLA 446 (621)
Q Consensus 367 ~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla 446 (621)
.....++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999999998877899999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCceeecccccccccchhhhc------cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHh
Q 007025 447 KLLDHCDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH 520 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 520 (621)
....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||...... .......
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~ 242 (298)
T 1phk_A 172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-------LMLRMIM 242 (298)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHH
T ss_pred hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-------HHHHHHh
Confidence 8765432 223456899999999985 456789999999999999999999999643221 1111111
Q ss_pred hhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 521 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 521 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.... . .........+..+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~-~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 243 SGNY-Q------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HTCC-C------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cCCc-c------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1110 0 0000011234679999999999999999999999864
No 213
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.2e-40 Score=336.55 Aligned_cols=256 Identities=21% Similarity=0.290 Sum_probs=200.5
Q ss_pred HHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-chhhHHHHHHHHHhhcc--cccceeeEEEEecCCce
Q 007025 295 QSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLAV--HRNLLRLIGFCMTTTER 371 (621)
Q Consensus 295 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~ 371 (621)
....++|++.+.||+|+||.||++...+++.||||++...... .....+.+|+.++.+++ ||||+++++++...+..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3445779999999999999999999888999999999654322 23457899999999997 59999999999999999
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
++||| +.+++|.+++.....+++..+..++.|+++||.|||+. +|+||||||+|||+++ +.+||+|||+++....
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 99999 56789999999888899999999999999999999999 9999999999999964 8999999999986643
Q ss_pred CCCc-eeecccccccccchhhhcc-----------CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHH
Q 007025 452 CDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKI 519 (621)
Q Consensus 452 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 519 (621)
.... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~-- 250 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLH-- 250 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHH--
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------HHHHH--
Confidence 3222 2234568999999999875 46888999999999999999999999643211 11111
Q ss_pred hhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 520 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 520 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...+......++...+..+.+++.+||+.||++||++.|++++-
T Consensus 251 -------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 251 -------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp -------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -------HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11111111112222246789999999999999999999999743
No 214
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.6e-40 Score=369.36 Aligned_cols=257 Identities=23% Similarity=0.352 Sum_probs=205.6
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEcC----CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
...++|++.+.||+|+||.||+|.+.. +..||||.++..........+.+|+.++++++||||+++++++. .+..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 345678888999999999999998742 46799999876544444567999999999999999999999985 4668
Q ss_pred eEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999999854 4799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
...........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... +....+....
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------~~~~~i~~~~------ 609 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGE------ 609 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHHTC------
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCC------
Confidence 443333334457889999999999999999999999999999997 88998743221 1111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
....+...+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 610 ----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 610 ----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1112223347799999999999999999999999999863
No 215
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.4e-40 Score=349.45 Aligned_cols=261 Identities=21% Similarity=0.304 Sum_probs=195.0
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc------ee
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE------RL 372 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~ 372 (621)
.+|.+.+.||+|+||+||+|+..++..||+|++..... ...+|+.+++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 46888999999999999999988777799998864332 12369999999999999999999865433 78
Q ss_pred EEEeeccCCChhhhh---ccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec-CCCceEEeeccccee
Q 007025 373 LVYPYMSNGSVASRL---KAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFGLAKL 448 (621)
Q Consensus 373 lv~e~~~~g~L~~~l---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~Dfgla~~ 448 (621)
+||||++++.+.... .....+++..+..++.||++||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999875433322 2356799999999999999999999999 999999999999999 799999999999987
Q ss_pred cCCCCCceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHH--------HHH
Q 007025 449 LDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWV--------KKI 519 (621)
Q Consensus 449 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~--------~~~ 519 (621)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.... ...
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 643322 2345689999999999765 58999999999999999999999997644322111111110 000
Q ss_pred hhh---cchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 520 HQE---KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 520 ~~~---~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
... ..............+....++++.+++.+||+.||++|||+.|+++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000 00000000000011122234689999999999999999999999975
No 216
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.4e-40 Score=345.50 Aligned_cols=268 Identities=20% Similarity=0.267 Sum_probs=201.2
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC-----Cce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT-----TER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 371 (621)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|+.+++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999976 68999999997554444455788999999999999999999988754 678
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
++||||+. |+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEeccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999997 5899888764 699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc---------eeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh
Q 007025 452 CDSH---------VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 521 (621)
Q Consensus 452 ~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 521 (621)
.... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...........+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 2211 1123468999999998765 67899999999999999999999999754321110000000000000
Q ss_pred hcchh--------hhccc------cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 522 EKKLE--------MLVDK------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 522 ~~~~~--------~~~d~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
..... ..... .......+..+.++.+++.+||+.||++|||+.|++++-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 00000 00000 000000112346789999999999999999999999753
No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.8e-39 Score=346.49 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=204.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-cCCcEEEEEEeccCcccchhhHHHHHHHHHhhccc-ccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ..++..|++++..++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 46799999999999999999996 4689999998865432 2357889999999986 55666666777788889999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---cCCCceEEeecccceecCC
Q 007025 376 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 376 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~Dfgla~~~~~ 451 (621)
||+ +++|.+++.. ...+++..++.|+.||+.||.|||++ +|+||||||+|||| +.++.+||+|||+++....
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 8999999974 56799999999999999999999999 99999999999999 6889999999999987654
Q ss_pred CCCce------eecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcch
Q 007025 452 CDSHV------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKL 525 (621)
Q Consensus 452 ~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (621)
..... .....||..|+|||++.+..++.++|||||||++|||++|+.||...........+... ........+
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i-~~~~~~~~~ 237 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI-SEKKVATSI 237 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHH-HHHHHHSCH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHH-hhccccccH
Confidence 33221 22456999999999999999999999999999999999999999754332211111111 111111111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 526 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 526 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
..+ ...+ +.++.+++.+||+.+|++||++.+|++.|+..
T Consensus 238 ~~l-----~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 238 EAL-----CRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHH-----HTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHH-----hcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 111 1112 36799999999999999999999999888753
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.7e-39 Score=339.88 Aligned_cols=265 Identities=19% Similarity=0.234 Sum_probs=194.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCC------
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTT------ 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 369 (621)
.++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357889999999999999999965 688999999975432 223456889999999999999999999997654
Q ss_pred ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 370 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
..++||||+++ +|.+.+.. .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ceEEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 67999999975 78887763 589999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchH--------HHH-----
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAML--------DWV----- 516 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~--------~~~----- 516 (621)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+. .+.
T Consensus 178 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 178 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred ccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 422 22334569999999999999999999999999999999999999997543211100000 000
Q ss_pred --HHHhhh------cchhhhccccccCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 517 --KKIHQE------KKLEMLVDKDLKNN---YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 517 --~~~~~~------~~~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...... ............+. ........+.+++.+||+.||++|||++|++++-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000 00000000000000 1123367899999999999999999999999754
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.4e-40 Score=351.05 Aligned_cols=197 Identities=22% Similarity=0.277 Sum_probs=170.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhc------ccccceeeEEEEecCCc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA------VHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~ 370 (621)
..+|++.+.||+|+||+||+|... +++.||||+++... .....+.+|+.++..+ .|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 457889999999999999999876 58999999996532 2234677888888776 56799999999999999
Q ss_pred eeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc--eEEeecccc
Q 007025 371 RLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE--AVVGDFGLA 446 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~--~kl~Dfgla 446 (621)
.++||||+. ++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999996 6899988754 3599999999999999999999999 9999999999999999887 999999999
Q ss_pred eecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCc
Q 007025 447 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGK 504 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~ 504 (621)
...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 250 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 250 CYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 765432 234568999999999999999999999999999999999999997543
No 220
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=7.9e-40 Score=337.54 Aligned_cols=264 Identities=23% Similarity=0.341 Sum_probs=201.3
Q ss_pred HhcCCCcCCeeeeccccEEEEEEE--cCCcEEEEEEeccCccc-chhhHHHHHHHHHhhc---ccccceeeEEEEe----
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYL--QDGTVVAVKRLKDGNAI-GGEIQFQTEVEMISLA---VHRNLLRLIGFCM---- 366 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l---~H~niv~l~~~~~---- 366 (621)
+.++|++.+.||+|+||.||+|.. .+++.||+|+++..... .....+.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 36889999998644322 1223567788777766 7999999999987
Q ss_pred -cCCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeec
Q 007025 367 -TTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDF 443 (621)
Q Consensus 367 -~~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 443 (621)
.....++||||++ |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999998 6999998754 3599999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHh---
Q 007025 444 GLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIH--- 520 (621)
Q Consensus 444 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 520 (621)
|+++..... .......||..|+|||++.+..++.++||||||+++|||++|+.||.......... .......
T Consensus 165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~~ 239 (326)
T 1blx_A 165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG---KILDVIGLPG 239 (326)
T ss_dssp CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCC
T ss_pred cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH---HHHHHcCCCC
Confidence 999765422 22234568999999999999999999999999999999999999997543221111 1111100
Q ss_pred hhcchhhh------cc---ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 521 QEKKLEML------VD---KDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 521 ~~~~~~~~------~d---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
........ .. ...........+..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 00 000011112234678999999999999999999999964
No 221
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.3e-39 Score=332.11 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=199.9
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 3467889999999999999999986 58899999986543 234557889999999999999999999999999999999
Q ss_pred eeccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 376 PYMSNGSVASRLKA-KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 376 e~~~~g~L~~~l~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 171 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-L 171 (302)
T ss_dssp ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-H
T ss_pred EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-c
Confidence 99999999998864 56799999999999999999999999 9999999999999999999999999987532110 1
Q ss_pred ceeecccccccccchhhhc-----cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhc
Q 007025 455 HVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLV 529 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (621)
.......||..|+|||++. ...++.++||||||+++|+|++|+.||...... ............ ..
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~-~~- 242 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSDPP-TL- 242 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCC-CC-
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHHHhccCCc-cc-
Confidence 1122345899999999984 567899999999999999999999999753321 111111111100 00
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007025 530 DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571 (621)
Q Consensus 530 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 571 (621)
..+...+..+.+++.+||+.||++|||+.+++++--
T Consensus 243 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 278 (302)
T 2j7t_A 243 ------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278 (302)
T ss_dssp ------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTT
T ss_pred ------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChH
Confidence 011222367899999999999999999999987543
No 222
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.3e-39 Score=342.09 Aligned_cols=263 Identities=19% Similarity=0.236 Sum_probs=201.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc--------cccceeeEEEEe--
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--------HRNLLRLIGFCM-- 366 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~-- 366 (621)
.++|.+.+.||+|+||+||+|+.. +++.||||+++... .....+.+|+.++..++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 467999999999999999999865 68899999996432 23456889999999886 788999999987
Q ss_pred --cCCceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC------
Q 007025 367 --TTTERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY------ 436 (621)
Q Consensus 367 --~~~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~------ 436 (621)
.....++||||+ +++|.+.+... ..+++..+..++.||+.||.|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 556789999999 45666665433 57999999999999999999999853 899999999999999775
Q ss_pred -------------------------------------------ceEEeecccceecCCCCCceeecccccccccchhhhc
Q 007025 437 -------------------------------------------EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLS 473 (621)
Q Consensus 437 -------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 473 (621)
.+||+|||+++..... .....||..|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999876432 23346899999999999
Q ss_pred cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccch--HHHHHHHhhhc---------chhhhcccc----------
Q 007025 474 TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAM--LDWVKKIHQEK---------KLEMLVDKD---------- 532 (621)
Q Consensus 474 ~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~d~~---------- 532 (621)
+..++.++|||||||++|||+||+.||............ ...+....... .........
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 999999999999999999999999999754332211111 11111100000 000000000
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 533 ---------LKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 533 ---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
-....+......+.+|+.+||+.||++|||++|++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356677889999999999999999999999975
No 223
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1e-39 Score=341.59 Aligned_cols=271 Identities=21% Similarity=0.254 Sum_probs=191.3
Q ss_pred HHHHHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc
Q 007025 292 KELQSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE 370 (621)
Q Consensus 292 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 370 (621)
.+.....++|.+.+.||+|+||.||+|... +++.||||++..... ....+.+++..+..++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 344566789999999999999999999975 689999998865432 22356678888889999999999999976443
Q ss_pred -------eeEEEeeccCCChhhh----hccCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCceEEcccccCeEEecC-CC
Q 007025 371 -------RLLVYPYMSNGSVASR----LKAKPSLDWATRKRIALGAARGLLYLH--EQCDPKIIHRDVKAANILLDE-YY 436 (621)
Q Consensus 371 -------~~lv~e~~~~g~L~~~----l~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlkp~NILl~~-~~ 436 (621)
.++||||++++ |... ......+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 78999999874 4433 335667999999999999999999999 77 9999999999999996 89
Q ss_pred ceEEeecccceecCCCCCceeecccccccccchhhhccCC-CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHH-
Q 007025 437 EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLD- 514 (621)
Q Consensus 437 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~- 514 (621)
.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||+||+.||...........+..
T Consensus 170 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 99999999998765332 233456899999999987654 89999999999999999999999975433211111110
Q ss_pred -------HHHHHhhhcchhhhccc------cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 515 -------WVKKIHQEKKLEMLVDK------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 515 -------~~~~~~~~~~~~~~~d~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
+..............+. ..........+.++.+++.+||+.||++|||+.|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 00000000000000000 000111122457899999999999999999999998653
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=329.24 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=198.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc---cchhhHHHHHHHHHhhcccccceeeEEEEe--cCCce
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA---IGGEIQFQTEVEMISLAVHRNLLRLIGFCM--TTTER 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 371 (621)
.++|.+.+.||+|+||.||++... +++.||+|+++.... ......+.+|+.++..++||||+++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 688999999975421 234567899999999999999999999984 45678
Q ss_pred eEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 372 LLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
++||||++++ |.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 6666653 45799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CceeecccccccccchhhhccCC--CCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 450 DHCD-SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 450 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
.... ........||..|+|||++.+.. ++.++||||||+++|||++|+.||..... ......+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~--- 229 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-------YKLFENIGKGS--- 229 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCC---
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------HHHHHHHhcCC---
Confidence 5322 22333456999999999997654 37799999999999999999999974321 11111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 527 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.. .+...+..+.+++.+||+.||++|||+.|++++
T Consensus 230 ----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ----YA----IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CC----CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CC----CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01 111233678999999999999999999999975
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.4e-39 Score=341.26 Aligned_cols=263 Identities=22% Similarity=0.256 Sum_probs=184.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecC------C
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------T 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 369 (621)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....++.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 467889999999999999999964 689999999965432 22345788999999999999999999998754 5
Q ss_pred ceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 370 ERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
..++|+|++ +++|.+++.. ..+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 679999999 6799988876 4699999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...........+....... .......+
T Consensus 183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p-~~~~~~~~ 257 (367)
T 2fst_X 183 ADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP-GAELLKKI 257 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC-CHHHHTTC
T ss_pred ccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC-CHHHHHHh
Confidence 421 234568999999999987 678999999999999999999999997543321111111100000 00000000
Q ss_pred ccc-------cc--cCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 529 VDK-------DL--KNN-----YDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 529 ~d~-------~~--~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
... .+ ... ......+.+.+|+.+||+.||++|||+.|++++-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 000 00 000 0011236789999999999999999999999764
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.1e-39 Score=334.57 Aligned_cols=258 Identities=19% Similarity=0.261 Sum_probs=202.8
Q ss_pred hcCCCcCCeeeeccccEEEEEEE-c-CCcEEEEEEeccCcccchhhHHHHHHHHHhhccccc------ceeeEEEEecCC
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYL-Q-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN------LLRLIGFCMTTT 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~ 369 (621)
.++|++.+.||+|+||.||+|.. . +++.||||+++... .....+.+|+.++..++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 45788999999999999999986 3 68899999996432 23456888999999888765 999999999999
Q ss_pred ceeEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC-------------
Q 007025 370 ERLLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE------------- 434 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~------------- 434 (621)
..++||||+ +++|.+++.... ++++..+..++.|++.||.|||+. +|+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 889999997654 689999999999999999999999 9999999999999987
Q ss_pred ------CCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCccccc
Q 007025 435 ------YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 508 (621)
Q Consensus 435 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~ 508 (621)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred ccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 678999999999865432 2345689999999999999999999999999999999999999975433211
Q ss_pred ccchHHHHHHHhhhcch-----------------------------hhhccc-cccCCCCHHHHHHHHHHHHHccCCCCC
Q 007025 509 KGAMLDWVKKIHQEKKL-----------------------------EMLVDK-DLKNNYDRIELEEMVQVALLCTQYLPS 558 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~-----------------------------~~~~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~ 558 (621)
. ..+......... .....+ ..........++.+.+++.+||+.||+
T Consensus 243 ~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 243 L----AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp H----HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred H----HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 1 111110000000 000000 000112334568899999999999999
Q ss_pred CCCCHHHHHHH
Q 007025 559 LRPKMSEVVRM 569 (621)
Q Consensus 559 ~RPs~~evl~~ 569 (621)
+|||+.|++++
T Consensus 319 ~Rpt~~ell~h 329 (339)
T 1z57_A 319 KRITLREALKH 329 (339)
T ss_dssp TSCCHHHHTTS
T ss_pred cccCHHHHhcC
Confidence 99999999865
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.2e-40 Score=349.82 Aligned_cols=258 Identities=24% Similarity=0.321 Sum_probs=194.2
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecC------Cce
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTT------TER 371 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~ 371 (621)
.+|+..+.||+|+||.||+|++. +|+.||||++..... .+.+|+++++.++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 45788899999999999999986 589999999865322 234799999999999999999988542 235
Q ss_pred eEEEeeccCCChhhhhc----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC-CceEEeecccc
Q 007025 372 LLVYPYMSNGSVASRLK----AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-YEAVVGDFGLA 446 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~Dfgla 446 (621)
++||||+++ ++.+.+. ....+++..+..++.||++||.|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999986 5655553 356799999999999999999999998 99999999999999955 67899999999
Q ss_pred eecCCCCCceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhh--c
Q 007025 447 KLLDHCDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQE--K 523 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 523 (621)
+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +...++..... .
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~---l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVLGTPTRE 279 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCSCCHH
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHH
Confidence 87653322 2345689999999999765 689999999999999999999999975432211 11111111000 0
Q ss_pred ch-------hhhcccccc-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 524 KL-------EMLVDKDLK-----NNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 524 ~~-------~~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.+ .....+.+. ..+....+.++.+|+.+||+.||++|||+.|+++|-
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 00 000000000 001222347899999999999999999999998753
No 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=339.59 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=201.7
Q ss_pred HHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCCce
Q 007025 293 ELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER 371 (621)
Q Consensus 293 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 371 (621)
+.....++|++.+.||+|+||.||+|..++ .||+|.++.... ......+.+|+.++.+++||||+++++++...+..
T Consensus 27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 333446788999999999999999998864 499999875432 22334677899999999999999999999999999
Q ss_pred eEEEeeccCCChhhhhccCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 372 LLVYPYMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
++||||+++++|.+++...+ .+++..+..++.|++.||.|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 99999999999999998654 799999999999999999999999 999999999999998 6799999999987543
Q ss_pred CCC----Cceeecccccccccchhhhcc---------CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHH
Q 007025 451 HCD----SHVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK 517 (621)
Q Consensus 451 ~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~ 517 (621)
... ........||+.|+|||.+.. ..++.++||||||+++|||++|+.||...... ....
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~ 253 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-------AIIW 253 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------HHHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHH
Confidence 211 112233458999999999874 35788999999999999999999999743221 1111
Q ss_pred HHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007025 518 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGDG 574 (621)
Q Consensus 518 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 574 (621)
...... .+... ....+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 254 ~~~~~~------~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 254 QMGTGM------KPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HHHTTC------CCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred HhccCC------CCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 111110 11111 0112256899999999999999999999999999853
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.2e-39 Score=323.61 Aligned_cols=253 Identities=24% Similarity=0.331 Sum_probs=204.3
Q ss_pred HhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc-cchhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 297 ATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA-IGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 297 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
..++|++.+.||+|+||.||+|... +++.||||++..... ......+.+|+.++++++||||+++++++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999976 689999999865432 23455788999999999999999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC---CceEEeecccceecCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY---YEAVVGDFGLAKLLDH 451 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~Dfgla~~~~~ 451 (621)
|||+++++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999999999988777899999999999999999999999 99999999999999754 4799999999986543
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
.. ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .....+...... .+.
T Consensus 177 ~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~---~~~ 243 (287)
T 2wei_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-------DILKRVETGKYA---FDL 243 (287)
T ss_dssp CS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCC---CCS
T ss_pred CC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCCCC---CCc
Confidence 22 2223458999999999865 5899999999999999999999999753221 111111111100 000
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.... ..+.++.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 244 PQWR----TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GGGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhh----hcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0011 123678999999999999999999999974
No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.9e-39 Score=335.07 Aligned_cols=255 Identities=24% Similarity=0.314 Sum_probs=180.1
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHH-HHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|...+.||+|+||.||+|... +|+.||||+++.........++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888999999999999999975 689999999976544334445666665 677789999999999999999999999
Q ss_pred eeccCCChhhhhcc-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecC
Q 007025 376 PYMSNGSVASRLKA-----KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 376 e~~~~g~L~~~l~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
||+++ +|.+++.. ...+++..+..++.|++.||.|||+.. +|+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 77777652 567999999999999999999999842 89999999999999999999999999998654
Q ss_pred CCCCceeecccccccccchhhh----ccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 451 HCDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 451 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
... ......||..|+|||++ .+..++.++||||||+++|||++|+.||........ ......
T Consensus 178 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~------ 243 (327)
T 3aln_A 178 DSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------QLTQVV------ 243 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCC------
T ss_pred ccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------HHHHHh------
Confidence 322 22334699999999998 456789999999999999999999999974321100 000000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 527 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
....+.+........+..+.+++.+||+.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000011111112234679999999999999999999999763
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=344.32 Aligned_cols=265 Identities=20% Similarity=0.273 Sum_probs=182.9
Q ss_pred CCCc-CCeeeeccccEEEEEEEc---CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEec--CCceeE
Q 007025 300 NFSS-KNLVGKGGFGNVYKGYLQ---DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT--TTERLL 373 (621)
Q Consensus 300 ~~~~-~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~l 373 (621)
.|++ +++||+|+||+||+|..+ +++.||||++..... ...+.+|+.+++.++||||+++++++.. ....++
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 3554 568999999999999975 578999999965432 2467899999999999999999999954 677899
Q ss_pred EEeeccCCChhhhhcc---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe----cCCCceEE
Q 007025 374 VYPYMSNGSVASRLKA---------KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL----DEYYEAVV 440 (621)
Q Consensus 374 v~e~~~~g~L~~~l~~---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~kl 440 (621)
||||+.+ +|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 78777752 12599999999999999999999999 99999999999999 67899999
Q ss_pred eecccceecCCCCC--ceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCccccccc--chHHH
Q 007025 441 GDFGLAKLLDHCDS--HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQKG--AMLDW 515 (621)
Q Consensus 441 ~Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~--~~~~~ 515 (621)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||.......... ...+.
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987653221 223345699999999999874 48999999999999999999999997543211000 00011
Q ss_pred HHHHhh------hcchhhh------------ccccccCCCC---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007025 516 VKKIHQ------EKKLEML------------VDKDLKNNYD---------RIELEEMVQVALLCTQYLPSLRPKMSEVVR 568 (621)
Q Consensus 516 ~~~~~~------~~~~~~~------------~d~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 568 (621)
+..+.. ......+ .......... ......+.+|+.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111100 0000000 0000000000 001356889999999999999999999997
Q ss_pred Hhh
Q 007025 569 MLE 571 (621)
Q Consensus 569 ~L~ 571 (621)
|--
T Consensus 334 hp~ 336 (405)
T 3rgf_A 334 DPY 336 (405)
T ss_dssp SGG
T ss_pred Chh
Confidence 543
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-38 Score=335.45 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=197.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCce----
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTER---- 371 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~---- 371 (621)
.++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 457888999999999999999975 68999999997543222 245788999999999999999999999877654
Q ss_pred --eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 372 --LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 372 --~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
++||||+. ++|.+.+.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eEEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999998 588887753 489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHH--------HHh
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVK--------KIH 520 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~ 520 (621)
.. ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+..... ...
T Consensus 195 ~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 195 DA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred cc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 42 2234568999999999987 6789999999999999999999999975432211111100000 000
Q ss_pred h---hcchhhhccccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007025 521 Q---EKKLEMLVDKDLKN---NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571 (621)
Q Consensus 521 ~---~~~~~~~~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 571 (621)
. ......+.. .... ...+..++.+.+++.+||+.||++|||+.|++++--
T Consensus 271 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 271 DKAAKSYIQSLPQ-TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp CHHHHHHHHHSCC-CCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhhhhhhccCC-CcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0 000000000 0000 001123477999999999999999999999997643
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.1e-39 Score=327.44 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=193.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEec---------
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT--------- 367 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------- 367 (621)
.++|++.+.||+|+||.||+|... +++.||||+++.. ......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467889999999999999999975 7899999999642 2234578899999999999999999998865
Q ss_pred ----CCceeEEEeeccCCChhhhhccC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEee
Q 007025 368 ----TTERLLVYPYMSNGSVASRLKAK-PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGD 442 (621)
Q Consensus 368 ----~~~~~lv~e~~~~g~L~~~l~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 442 (621)
....++||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 35678999999999999999743 4688899999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCC-------------CceeecccccccccchhhhccC-CCCCccchHhHHHHHHHHHhCCCCcccCccccc
Q 007025 443 FGLAKLLDHCD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELISGLRALEFGKTANQ 508 (621)
Q Consensus 443 fgla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~ 508 (621)
||++....... ........||..|+|||.+.+. .++.++|||||||++|||++ ||.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--- 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--- 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH---
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh---
Confidence 99998654221 1122344589999999999764 68999999999999999998 4432111
Q ss_pred ccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 509 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
........... .......++...+..+.+++.+||+.||++|||+.|++++-
T Consensus 234 ---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 234 ---RVNILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp ---HHHHHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ---HHHHHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 01111111110 11111223333446789999999999999999999999753
No 234
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=331.33 Aligned_cols=247 Identities=24% Similarity=0.347 Sum_probs=195.1
Q ss_pred HHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-----hhhHHHHHHHHHhhc----ccccceeeEEE
Q 007025 295 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLA----VHRNLLRLIGF 364 (621)
Q Consensus 295 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l----~H~niv~l~~~ 364 (621)
+...++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445678999999999999999999864 68899999996543221 223466789998888 89999999999
Q ss_pred EecCCceeEEEee-ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec-CCCceEEee
Q 007025 365 CMTTTERLLVYPY-MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGD 442 (621)
Q Consensus 365 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~D 442 (621)
+...+..++|+|| +.+++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 78999999998877899999999999999999999999 999999999999999 899999999
Q ss_pred cccceecCCCCCceeecccccccccchhhhccCCCC-CccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh
Q 007025 443 FGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ 521 (621)
Q Consensus 443 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 521 (621)
||+++...... .....|+..|+|||++.+..+. .++||||||+++|||++|+.||..... ...
T Consensus 184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------------~~~ 247 (312)
T 2iwi_A 184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------------ILE 247 (312)
T ss_dssp CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHH
T ss_pred cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------------Hhh
Confidence 99998765422 2345589999999999877764 589999999999999999999863210 000
Q ss_pred hcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007025 522 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLE 571 (621)
Q Consensus 522 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 571 (621)
. . ..++...+..+.+++.+||+.||++|||+.|++++--
T Consensus 248 ~---------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 248 A---------E--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp T---------C--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred h---------c--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0 0 0111223467899999999999999999999997543
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.3e-38 Score=333.05 Aligned_cols=201 Identities=25% Similarity=0.310 Sum_probs=170.7
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-cc-----cceeeEEEEecC
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HR-----NLLRLIGFCMTT 368 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~ 368 (621)
...++|++.+.||+|+||+||+|... +++.||||+++... .....+..|+.++..++ |+ +|+++++++...
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 34678999999999999999999976 68899999997432 22345777888888775 44 499999999999
Q ss_pred CceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec--CCCceEEeecc
Q 007025 369 TERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD--EYYEAVVGDFG 444 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~--~~~~~kl~Dfg 444 (621)
+..++||||++ |+|.+++... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 99999999996 5999998754 4699999999999999999999952 23899999999999995 57889999999
Q ss_pred cceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCc
Q 007025 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGK 504 (621)
Q Consensus 445 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~ 504 (621)
+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 207 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 207 SSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99876432 234568999999999999999999999999999999999999998543
No 236
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.4e-39 Score=331.38 Aligned_cols=246 Identities=23% Similarity=0.349 Sum_probs=202.7
Q ss_pred HHHhcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-----hhhHHHHHHHHHhhcc--cccceeeEEEEe
Q 007025 295 QSATSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-----GEIQFQTEVEMISLAV--HRNLLRLIGFCM 366 (621)
Q Consensus 295 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~--H~niv~l~~~~~ 366 (621)
....++|++.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++.+++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344578999999999999999999864 68999999997543221 2235778999999996 599999999999
Q ss_pred cCCceeEEEeeccC-CChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec-CCCceEEeecc
Q 007025 367 TTTERLLVYPYMSN-GSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVGDFG 444 (621)
Q Consensus 367 ~~~~~~lv~e~~~~-g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~Dfg 444 (621)
..+..++|+|++.+ ++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++ +++.+||+|||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999999976 89999998878899999999999999999999999 999999999999999 78999999999
Q ss_pred cceecCCCCCceeecccccccccchhhhccCCC-CCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhc
Q 007025 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEK 523 (621)
Q Consensus 445 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 523 (621)
+++..... ......||+.|+|||++.+..+ +.++||||||+++|||+||+.||..... .....
T Consensus 196 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------~~~~~ 259 (320)
T 3a99_A 196 SGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------IIRGQ 259 (320)
T ss_dssp TCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHHCC
T ss_pred cccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------------hhccc
Confidence 99876532 2234569999999999987775 6889999999999999999999964211 00000
Q ss_pred chhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 524 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 524 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...... .+.++.+++.+||+.||++|||++|++++-
T Consensus 260 -------~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 260 -------VFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp -------CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -------cccccc----CCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 001111 236789999999999999999999998754
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=334.83 Aligned_cols=259 Identities=20% Similarity=0.259 Sum_probs=197.6
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc-hhhHHHHHHHHHhhcccccceeeEEEEecCCc-----
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE----- 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 370 (621)
.++|.+.+.||+|+||.||+|... +|+.||||++....... ....+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999975 68999999997543222 24568899999999999999999999987654
Q ss_pred -eeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 371 -RLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 371 -~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
.++||||++ |+|.+++.. .+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999998 588888754 489999999999999999999999 9999999999999999999999999999764
Q ss_pred CCCCCceeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhh--hcc--
Q 007025 450 DHCDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQ--EKK-- 524 (621)
Q Consensus 450 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-- 524 (621)
... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ........ ...
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT---QILKVTGVPGTEFVQ 249 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH---HHHHHHCBCCHHHHT
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCCHHHHH
Confidence 322 234568999999999987 678999999999999999999999997543211110 00000000 000
Q ss_pred ----------hhhhc---cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 525 ----------LEMLV---DKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 525 ----------~~~~~---d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...+. ...+ .......+..+.+++.+||+.||++|||+.|++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00000 0000 111223457899999999999999999999998753
No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.2e-38 Score=330.49 Aligned_cols=258 Identities=18% Similarity=0.249 Sum_probs=199.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CC-cEEEEEEeccCcccchhhHHHHHHHHHhhccccc------ceeeEEEEecCC
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DG-TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN------LLRLIGFCMTTT 369 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~ 369 (621)
.++|++.+.||+|+||+||+|... ++ +.||+|+++... .....+.+|+.++..++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 467899999999999999999975 34 789999996432 23456888999999998776 899999999999
Q ss_pred ceeEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEe---------------
Q 007025 370 ERLLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL--------------- 432 (621)
Q Consensus 370 ~~~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl--------------- 432 (621)
..++||||+ ++++.+.+... ..+++..+..++.||+.||.|||+. +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 999999999 56777776543 4799999999999999999999999 99999999999999
Q ss_pred ----cCCCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCccccc
Q 007025 433 ----DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQ 508 (621)
Q Consensus 433 ----~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~ 508 (621)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 56889999999999865432 2345699999999999999999999999999999999999999975432111
Q ss_pred ccchHHHHHHHhhhcc---------hhhh--------------------ccc-cccCCCCHHHHHHHHHHHHHccCCCCC
Q 007025 509 KGAMLDWVKKIHQEKK---------LEML--------------------VDK-DLKNNYDRIELEEMVQVALLCTQYLPS 558 (621)
Q Consensus 509 ~~~~~~~~~~~~~~~~---------~~~~--------------------~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~ 558 (621)
...+........ .... ..+ .............+.+++.+||+.||+
T Consensus 248 ----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 248 ----LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp ----HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred ----HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 111111000000 0000 000 000011234456899999999999999
Q ss_pred CCCCHHHHHHH
Q 007025 559 LRPKMSEVVRM 569 (621)
Q Consensus 559 ~RPs~~evl~~ 569 (621)
+|||+.|++++
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999864
No 239
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=332.62 Aligned_cols=263 Identities=21% Similarity=0.275 Sum_probs=192.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEe----------
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCM---------- 366 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~---------- 366 (621)
.++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 367888999999999999999986 48999999986543 234457889999999999999999999874
Q ss_pred ----cCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec-CCCceEEe
Q 007025 367 ----TTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD-EYYEAVVG 441 (621)
Q Consensus 367 ----~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~ 441 (621)
.....++||||++ |+|.+++.. .++++..+..++.|++.||.|||+. +|+||||||+|||++ +++.+||+
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467799999998 699998875 4689999999999999999999999 999999999999997 57799999
Q ss_pred ecccceecCCCCCc--eeecccccccccchhhhcc-CCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHH
Q 007025 442 DFGLAKLLDHCDSH--VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKK 518 (621)
Q Consensus 442 Dfgla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 518 (621)
|||+++........ ......+|..|+|||.+.. ..++.++||||||+++|||+||+.||.......... .....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~ 240 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ---LILES 240 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHh
Confidence 99999866432211 2233457899999998876 678999999999999999999999997543211110 00000
Q ss_pred Hhh--hc-------chhhhcccccc-C-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 519 IHQ--EK-------KLEMLVDKDLK-N-----NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 519 ~~~--~~-------~~~~~~d~~~~-~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
... .. ........... . ...+..+.++.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 000 00 00000000000 0 0011234679999999999999999999999874
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-38 Score=330.29 Aligned_cols=251 Identities=20% Similarity=0.245 Sum_probs=173.1
Q ss_pred hcCCCcC-CeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEec----CCce
Q 007025 298 TSNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT----TTER 371 (621)
Q Consensus 298 ~~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~ 371 (621)
.++|.+. ++||+|+||+||+|... +++.||||++.... ....+....+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4678874 47999999999999976 68999999986432 112222334566789999999999876 4457
Q ss_pred eEEEeeccCCChhhhhccC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceEEeecccc
Q 007025 372 LLVYPYMSNGSVASRLKAK--PSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 446 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~Dfgla 446 (621)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999999999765 3699999999999999999999999 9999999999999975 456999999999
Q ss_pred eecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 447 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
+..... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.............. .....
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~---- 248 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR---RIRLG---- 248 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH---hhhcc----
Confidence 865432 22345689999999999888899999999999999999999999975332111100000 00000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 527 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 527 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
. ...........+..+.+++.+||+.||++|||+.|++++
T Consensus 249 ~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 Q---YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred c---cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000000111234678999999999999999999999974
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.6e-38 Score=332.48 Aligned_cols=263 Identities=19% Similarity=0.261 Sum_probs=198.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-----------cccceeeEEEEe
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-----------HRNLLRLIGFCM 366 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~~ 366 (621)
.+|.+.+.||+|+||+||+|... +++.||||+++... .....+.+|+.++.+++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 57889999999999999999974 68999999996432 23446788999888876 899999999987
Q ss_pred cCC----ceeEEEeeccCCChhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec------C
Q 007025 367 TTT----ERLLVYPYMSNGSVASRLKA--KPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD------E 434 (621)
Q Consensus 367 ~~~----~~~lv~e~~~~g~L~~~l~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~------~ 434 (621)
..+ ..++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+++ +|+||||||+|||++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 654 689999999 8899999875 346999999999999999999999843 899999999999994 4
Q ss_pred CCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccc---
Q 007025 435 YYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA--- 511 (621)
Q Consensus 435 ~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~--- 511 (621)
.+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999876432 2334689999999999999999999999999999999999999975432211110
Q ss_pred hHHHHHHHhh--------hcchhhhccc-------------------cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 007025 512 MLDWVKKIHQ--------EKKLEMLVDK-------------------DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMS 564 (621)
Q Consensus 512 ~~~~~~~~~~--------~~~~~~~~d~-------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 564 (621)
+......... .......... .....++...+.++.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 0011110000 0000000000 001134567788999999999999999999999
Q ss_pred HHHHHh
Q 007025 565 EVVRML 570 (621)
Q Consensus 565 evl~~L 570 (621)
|++++-
T Consensus 330 ell~hp 335 (373)
T 1q8y_A 330 GLVNHP 335 (373)
T ss_dssp HHHTCG
T ss_pred HHhhCh
Confidence 998743
No 242
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2e-38 Score=340.07 Aligned_cols=250 Identities=24% Similarity=0.265 Sum_probs=187.8
Q ss_pred CCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEEEeec
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYPYM 378 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 378 (621)
.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+.++.++ +||||+++++++......++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 34556889999999998776667999999998643 234577899999876 8999999999999999999999999
Q ss_pred cCCChhhhhccCCCC-------CHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC-------------Cce
Q 007025 379 SNGSVASRLKAKPSL-------DWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY-------------YEA 438 (621)
Q Consensus 379 ~~g~L~~~l~~~~~l-------~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~-------------~~~ 438 (621)
. |+|.+++...... ++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999765432 2334568999999999999999 99999999999999754 489
Q ss_pred EEeecccceecCCCCCc---eeecccccccccchhhhcc-------CCCCCccchHhHHHHHHHHHh-CCCCcccCcccc
Q 007025 439 VVGDFGLAKLLDHCDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELIS-GLRALEFGKTAN 507 (621)
Q Consensus 439 kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~ 507 (621)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999877543322 1234569999999999976 568999999999999999999 999986432110
Q ss_pred cccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 508 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
...... .... +..........+.++.+++.+||+.||++|||+.|++++-
T Consensus 248 -----~~i~~~---~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 248 -----SNIIRG---IFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp -----HHHHHT---CCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -----HHHhcC---CCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 011100 0000 1111112455678899999999999999999999998653
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=322.59 Aligned_cols=252 Identities=23% Similarity=0.313 Sum_probs=180.3
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhH-HHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
.++|+..+.||+|+||.||+|... +|+.||||+++.........+ +.++..++..++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356888899999999999999986 689999999976543333333 444445677889999999999999999999999
Q ss_pred eeccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceEEcccccCeEEecCCCceEEeecccceecCCCC
Q 007025 376 PYMSNGSVASRLK-AKPSLDWATRKRIALGAARGLLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCD 453 (621)
Q Consensus 376 e~~~~g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~ 453 (621)
||+ ++.+..... ....+++..+..++.|+++||.|||+ . +|+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 445544443 25679999999999999999999998 5 89999999999999999999999999997654322
Q ss_pred Cceeecccccccccchhhhc-----cCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhh
Q 007025 454 SHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEML 528 (621)
Q Consensus 454 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (621)
......||+.|+|||.+. ...++.++||||||+++|||++|+.||...... .............
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~--- 248 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQEEPP--- 248 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHHSCCC---
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhccCCC---
Confidence 223446899999999994 456889999999999999999999999742211 1111111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 529 VDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 529 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.... ....+..+.+++.+||+.||.+||++.|++++
T Consensus 249 ---~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 ---LLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---CCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000 01123678999999999999999999999864
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8.6e-39 Score=353.24 Aligned_cols=264 Identities=23% Similarity=0.286 Sum_probs=199.4
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEec------CCc
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMT------TTE 370 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 370 (621)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|+.++..++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999975 6899999999765444455679999999999999999999999765 667
Q ss_pred eeEEEeeccCCChhhhhccCC---CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCc---eEEeecc
Q 007025 371 RLLVYPYMSNGSVASRLKAKP---SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYE---AVVGDFG 444 (621)
Q Consensus 371 ~~lv~e~~~~g~L~~~l~~~~---~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~Dfg 444 (621)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997543 689999999999999999999999 9999999999999997664 9999999
Q ss_pred cceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccc-hHH-HHHHHhhh
Q 007025 445 LAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGA-MLD-WVKKIHQE 522 (621)
Q Consensus 445 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~-~~~-~~~~~~~~ 522 (621)
++....... ......||..|+|||.+.+..++.++||||||+++|||++|+.||........... ... ........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 998765432 22345699999999999999999999999999999999999999975322111000 000 00000000
Q ss_pred cchhhh--ccc--cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 007025 523 KKLEML--VDK--DLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEV 566 (621)
Q Consensus 523 ~~~~~~--~d~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 566 (621)
...... ... ..........+..+.+++.+||+.||++|||+.|+
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 000 01122344567889999999999999999999774
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=333.84 Aligned_cols=250 Identities=23% Similarity=0.274 Sum_probs=187.5
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEEEe
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLVYP 376 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 376 (621)
..+|...++||+|+||+||.....+++.||||++..... ..+.+|+.++..+ +||||+++++++.+....++|||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 346788899999999997655566799999999964322 2356899999988 79999999999999999999999
Q ss_pred eccCCChhhhhccCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC-----CCceEEeecccceecC
Q 007025 377 YMSNGSVASRLKAKP-SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE-----YYEAVVGDFGLAKLLD 450 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~Dfgla~~~~ 450 (621)
|+. |+|.+++.... ...+..+..++.||+.||.|||+. +|+||||||+|||++. ...+||+|||+++...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 997 59999987543 455566789999999999999999 9999999999999953 3368899999998765
Q ss_pred CCCC--ceeecccccccccchhhhc---cCCCCCccchHhHHHHHHHHHh-CCCCcccCcccccccchHHHHHHHhhhcc
Q 007025 451 HCDS--HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELIS-GLRALEFGKTANQKGAMLDWVKKIHQEKK 524 (621)
Q Consensus 451 ~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (621)
.... .......||+.|+|||++. ...++.++|||||||++|||+| |..||...... ..........
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~ 246 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QANILLGACS 246 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HHHHHTTCCC
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HHHHHhccCC
Confidence 3322 2233456999999999997 4567889999999999999999 88888532210 0111111000
Q ss_pred hhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 007025 525 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRML 570 (621)
Q Consensus 525 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 570 (621)
.. . ..........+.+++.+||+.||++|||+.||++|-
T Consensus 247 ~~-----~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 247 LD-----C--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CT-----T--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred cc-----c--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 00 0 011223456688999999999999999999998643
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-37 Score=350.60 Aligned_cols=237 Identities=21% Similarity=0.278 Sum_probs=192.1
Q ss_pred cCCCcCCeeeeccccEEEEEEEc--CCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccceeeEEEEecCCc-----e
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ--DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLIGFCMTTTE-----R 371 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-----~ 371 (621)
++|++.+.||+|+||.||+|.+. +++.||||++...........+.+|+.++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67899999999999999999975 5899999998755444445578899999999999999999999987665 6
Q ss_pred eEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCC
Q 007025 372 LLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDH 451 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~ 451 (621)
++||||+++++|.+++.. .+++..+..++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999988765 699999999999999999999999 99999999999999986 899999999987653
Q ss_pred CCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccc
Q 007025 452 CDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDK 531 (621)
Q Consensus 452 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 531 (621)
. ....||+.|+|||++.++. +.++|||||||++|+|++|..|+........ ..
T Consensus 234 ~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------------~~- 286 (681)
T 2pzi_A 234 F-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------------PE- 286 (681)
T ss_dssp C-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------CT-
T ss_pred C-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc--------------------cc-
Confidence 2 3456999999999997764 8899999999999999999888763211000 00
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-HHHHHHhh
Q 007025 532 DLKNNYDRIELEEMVQVALLCTQYLPSLRPKM-SEVVRMLE 571 (621)
Q Consensus 532 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-~evl~~L~ 571 (621)
..........+.+++.+||+.||++||+. +++.+.+.
T Consensus 287 ---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 287 ---DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp ---TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ---cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 00011123678999999999999999964 45555554
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.9e-36 Score=306.35 Aligned_cols=230 Identities=12% Similarity=0.038 Sum_probs=182.7
Q ss_pred cCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc--hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEEE
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 375 (621)
++|++.+.||+|+||.||+|... +++.||||+++...... ....+.+|+..+..++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999976 48999999997654322 2357899999999999999999999999999999999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCc
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSH 455 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~ 455 (621)
||+++++|.+++... .....+..++.|++.||.|||++ +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999999999654 35667889999999999999999 99999999999999999999997543
Q ss_pred eeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccC
Q 007025 456 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 535 (621)
Q Consensus 456 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 535 (621)
|++ .++.++|||||||++|||+||+.||............. ......... ..
T Consensus 175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---------~~~~~~~~~--~~ 226 (286)
T 3uqc_A 175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---------RDTAGQPIE--PA 226 (286)
T ss_dssp ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---------BCTTSCBCC--HH
T ss_pred ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---------HHhccCCCC--hh
Confidence 333 36789999999999999999999998644321100000 000000000 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007025 536 NYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRMLEGD 573 (621)
Q Consensus 536 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 573 (621)
......+..+.+++.+||+.||++| |+.|+++.|+..
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA 263 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence 0111233678999999999999999 999999999874
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.6e-37 Score=318.48 Aligned_cols=244 Identities=14% Similarity=0.147 Sum_probs=185.9
Q ss_pred hcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcc-------cchhhHHHHHHHHHhhcc---------cccceee
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNA-------IGGEIQFQTEVEMISLAV---------HRNLLRL 361 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~---------H~niv~l 361 (621)
.++|++.+.||+|+||+||+|+. +|+.||||+++.... ......+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688889999999999999998 689999999975432 222357889999988886 7777666
Q ss_pred EEEE-----------------ec-------------CCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHH
Q 007025 362 IGFC-----------------MT-------------TTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLY 411 (621)
Q Consensus 362 ~~~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~ 411 (621)
.+.+ .. ....++||||+++|++.+.+.. ..+++..+..++.||+.||.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 6654 22 6788999999999987777754 568999999999999999999
Q ss_pred Hh-hcCCCceEEcccccCeEEecCCC--------------------ceEEeecccceecCCCCCceeecccccccccchh
Q 007025 412 LH-EQCDPKIIHRDVKAANILLDEYY--------------------EAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPE 470 (621)
Q Consensus 412 LH-~~~~~~ivH~Dlkp~NILl~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE 470 (621)
|| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE 247 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDED 247 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSG
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChh
Confidence 99 88 999999999999999887 8999999999876532 236999999999
Q ss_pred hhccCCCCCccchHhHHHH-HHHHHhCCCCcccCcccccccchHHHHHHHhhhcchhh-hccccccCCCCHHHHHHHHHH
Q 007025 471 YLSTGQSSEKTDVFGFGIL-LLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEM-LVDKDLKNNYDRIELEEMVQV 548 (621)
Q Consensus 471 ~~~~~~~~~~sDvwS~Gvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~l 548 (621)
++.+.. +.++||||+|++ .+++++|..||... .|...... ..... ..............++++.++
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV----------LWLHYLTD-KMLKQMTFKTKCNTPAMKQIKRKIQEF 315 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH----------HHHHHHHH-HHHHTCCCSSCCCSHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcch----------hhhhHHHH-hhhhhhccCcccchhhhhhcCHHHHHH
Confidence 998666 889999998777 77888998888521 11111110 00000 011111111234567889999
Q ss_pred HHHccCCCCCCCCCHHHHH-HH
Q 007025 549 ALLCTQYLPSLRPKMSEVV-RM 569 (621)
Q Consensus 549 i~~cl~~dP~~RPs~~evl-~~ 569 (621)
+.+||+.| |++|++ +|
T Consensus 316 i~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHGGGSS-----SHHHHHHHC
T ss_pred HHHHhccC-----CHHHHHhcC
Confidence 99999976 999998 54
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.7e-36 Score=306.37 Aligned_cols=225 Identities=19% Similarity=0.273 Sum_probs=177.1
Q ss_pred cCCCcC-CeeeeccccEEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHH-hhcccccceeeEEEEec----CCce
Q 007025 299 SNFSSK-NLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLLRLIGFCMT----TTER 371 (621)
Q Consensus 299 ~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~ 371 (621)
++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|+.++ ...+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456665 78999999999999974 6899999998532 3567888887 56689999999999876 6678
Q ss_pred eEEEeeccCCChhhhhccCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecC---CCceEEeecccc
Q 007025 372 LLVYPYMSNGSVASRLKAKP--SLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDE---YYEAVVGDFGLA 446 (621)
Q Consensus 372 ~lv~e~~~~g~L~~~l~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~Dfgla 446 (621)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999997643 699999999999999999999999 9999999999999998 789999999998
Q ss_pred eecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcccCcccccccchHHHHHHHhhhcchh
Q 007025 447 KLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLE 526 (621)
Q Consensus 447 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (621)
.... +..++.++|||||||++|||+||+.||........... ...
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~------------~~~ 212 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG------------MKT 212 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC------------SCC
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH------------HHH
Confidence 7543 13456789999999999999999999964332111000 000
Q ss_pred hhccccccCCCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 527 MLVDKDLKNNYD----RIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 527 ~~~d~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
.+.... ...+ ...+.++.+++.+||+.||++|||+.|++++
T Consensus 213 ~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 RIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 0011 1124679999999999999999999999974
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-36 Score=322.89 Aligned_cols=241 Identities=15% Similarity=0.103 Sum_probs=179.7
Q ss_pred hcCCCcCCeeeeccccEEEEEEEc-CCcEEEEEEeccCcccc--hhhHHHHHHHHHhhccc-ccce---------eeE--
Q 007025 298 TSNFSSKNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNAIG--GEIQFQTEVEMISLAVH-RNLL---------RLI-- 362 (621)
Q Consensus 298 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H-~niv---------~l~-- 362 (621)
+..|...++||+|+||+||+|.+. +|+.||||+++...... ..+.+.+|+.++..++| +|.. ...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345777889999999999999954 68999999987433222 24578899999998876 2211 111
Q ss_pred ----------EEEec-----CCceeEEEeeccCCChhhhhc-------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCce
Q 007025 363 ----------GFCMT-----TTERLLVYPYMSNGSVASRLK-------AKPSLDWATRKRIALGAARGLLYLHEQCDPKI 420 (621)
Q Consensus 363 ----------~~~~~-----~~~~~lv~e~~~~g~L~~~l~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 420 (621)
.++.. ....+++|+++ +++|.+++. ....+++..+..++.|+++||.|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111 12345666655 579998884 134578889999999999999999999 99
Q ss_pred EEcccccCeEEecCCCceEEeecccceecCCCCCceeecccccccccchhhh----------ccCCCCCccchHhHHHHH
Q 007025 421 IHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGILL 490 (621)
Q Consensus 421 vH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwS~Gvil 490 (621)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++ ....++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTE----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCC----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999986542 2344567 999999999 455588899999999999
Q ss_pred HHHHhCCCCcccCcccccccchHHHHHHHhhhcchhhhccccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007025 491 LELISGLRALEFGKTANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPSLRPKMSEVVRM 569 (621)
Q Consensus 491 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 569 (621)
|||+||+.||......... ..++... ..+ ++.+.+++.+||+.||++||++.|++++
T Consensus 308 ~elltg~~Pf~~~~~~~~~----------------~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS----------------EWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS----------------GGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhhhH----------------HHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9999999999754322111 1111100 112 3679999999999999999999888753
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=3.5e-30 Score=283.92 Aligned_cols=187 Identities=14% Similarity=0.054 Sum_probs=133.2
Q ss_pred eeeeccccEEEEEE-EcCCcEEEEEEeccCccc---------chhhHHHHHHHHHhhc-ccccceeeEEEEecCCceeEE
Q 007025 306 LVGKGGFGNVYKGY-LQDGTVVAVKRLKDGNAI---------GGEIQFQTEVEMISLA-VHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 306 ~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---------~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 374 (621)
..+.|++|.+..++ .--|+.+++|++...... ...++|.+|+++|+++ .|+||+++++++.++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 34566666655544 224888999999654211 1234699999999999 699999999999999999999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||++|++|.+++...++++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~- 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC- 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence 9999999999999988888765 4889999999999999 99999999999999999999999999998765432
Q ss_pred ceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCc
Q 007025 455 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRAL 500 (621)
Q Consensus 455 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~ 500 (621)
.......||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 23345679999999999865 5677899999999998887765554
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=1.3e-26 Score=237.38 Aligned_cols=171 Identities=32% Similarity=0.544 Sum_probs=158.3
Q ss_pred CCchHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcc--eeeEEeCC----CCEEEEecCCCCCcc--cccccccCCCCCc
Q 007025 27 KGVNYEVQALMGIKDSLHDPHDVLNNWDENSVDPCS--WALVTCSD----GLVTGLGAPSQNLSG--TLSSSIGNLTNLQ 98 (621)
Q Consensus 27 ~~~~~~~~al~~~k~~~~~~~~~~~~W~~~~~~~c~--w~gv~C~~----~~v~~l~l~~~~l~~--~~~~~~~~l~~L~ 98 (621)
.|.++|++||++||+++.||. .+.+|..+ .+||. |.||+|+. ++|+.|+|++|++.+ .+|..|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 367789999999999999887 78999764 58998 99999985 789999999999999 9999999999999
Q ss_pred EEEccc-CccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCC
Q 007025 99 LVLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 177 (621)
Q Consensus 99 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 177 (621)
+|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|+|++|+|++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccc------cceeccCCccc
Q 007025 178 NLSGPVPSFHA------KTFNITGNSLI 199 (621)
Q Consensus 178 ~l~~~~p~~~~------~~~~l~~N~~~ 199 (621)
+|++.+|..+. +.+++++|.+.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~ 187 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeee
Confidence 99988886543 66889999875
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.3e-26 Score=253.93 Aligned_cols=185 Identities=16% Similarity=0.190 Sum_probs=145.3
Q ss_pred CcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccc-------hhhHHHHHHHHHhhcccccceeeEEEEecCCceeEE
Q 007025 302 SSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIG-------GEIQFQTEVEMISLAVHRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 302 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 374 (621)
...+.||+|+||.||+|.. .++.+++|......... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 47888998865432211 123589999999999999999777777777888999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCC
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDS 454 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~ 454 (621)
|||+++++|.+++.. +..++.|+++||.|||++ +|+||||||+|||++. .+||+|||+++.......
T Consensus 418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 999999999999976 568999999999999999 9999999999999999 999999999998754322
Q ss_pred ce------eecccccccccchhhhcc--CCCCCccchHhHHHHHHHHHhCCCCc
Q 007025 455 HV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELISGLRAL 500 (621)
Q Consensus 455 ~~------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvil~elltg~~p~ 500 (621)
.. .....||+.|+|||++.. ..|+..+|+||..+-..+-+.++.++
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 11 135569999999999987 56788899999998888887776554
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.2e-23 Score=211.50 Aligned_cols=153 Identities=14% Similarity=0.072 Sum_probs=122.4
Q ss_pred HHHHHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc-----------------chhhHHHHHHHHHhhccc
Q 007025 293 ELQSATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI-----------------GGEIQFQTEVEMISLAVH 355 (621)
Q Consensus 293 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~l~H 355 (621)
.+......|.+.+.||+|+||.||+|...+|+.||||.++..... .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 344455667778999999999999999977999999999643211 12346889999999998
Q ss_pred ccceeeEEEEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCC
Q 007025 356 RNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEY 435 (621)
Q Consensus 356 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~ 435 (621)
| +++.+++. .+..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ +
T Consensus 163 -~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 163 -G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp -T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-T
T ss_pred -C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-C
Confidence 4 66666543 356799999999999998 432 23457999999999999999 999999999999999 9
Q ss_pred CceEEeecccceecCCCCCceeecccccccccchhhhcc
Q 007025 436 YEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLST 474 (621)
Q Consensus 436 ~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 474 (621)
+.+||+|||+++. +..|.|||++..
T Consensus 229 ~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 229 EGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp TEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred CcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 9999999999973 345789998853
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.88 E-value=2.1e-23 Score=239.46 Aligned_cols=155 Identities=31% Similarity=0.483 Sum_probs=105.6
Q ss_pred CCchHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcceeeEEeCCCCEEEEecCCCCCccc---ccccccCCCCCcEEEcc
Q 007025 27 KGVNYEVQALMGIKDSLHDPHDVLNNWDENSVDPCSWALVTCSDGLVTGLGAPSQNLSGT---LSSSIGNLTNLQLVLLQ 103 (621)
Q Consensus 27 ~~~~~~~~al~~~k~~~~~~~~~~~~W~~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~---~~~~~~~l~~L~~L~L~ 103 (621)
.+.++|++||++||+++.||. .+++|.. +.|||.|.||+|+.++|+.|+|+++++.|. +|+.+.+|++|+.++++
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSS-NKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECT
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCc
Confidence 346789999999999999998 8999984 459999999999989999999999999998 77655555555555555
Q ss_pred cCccCCCCCccccccccccccccccccccCCCCC--CCcccccchhhhcccccccCCCCCCC-CCCCCcceEeccCCCCC
Q 007025 104 NNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS--TVSHLETLQYLRLNNNSLTGAIPPSL-SNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 104 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~ 180 (621)
.|.+. .+|..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|.++
T Consensus 86 ~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 86 NSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred CCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 55554 3445555555555555555555555555 55555555555555555555555443 45555555555555555
Q ss_pred CCCC
Q 007025 181 GPVP 184 (621)
Q Consensus 181 ~~~p 184 (621)
+.+|
T Consensus 165 ~~~~ 168 (768)
T 3rgz_A 165 GANV 168 (768)
T ss_dssp EETH
T ss_pred CcCC
Confidence 4443
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=5.1e-23 Score=235.86 Aligned_cols=169 Identities=25% Similarity=0.334 Sum_probs=148.4
Q ss_pred CCchHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCC--cce------------eeEEeC-CCCEEEEecCCCCCcccc
Q 007025 27 KGVNYEVQALMGIKDSLHDPHDVLNNWDENS----VDP--CSW------------ALVTCS-DGLVTGLGAPSQNLSGTL 87 (621)
Q Consensus 27 ~~~~~~~~al~~~k~~~~~~~~~~~~W~~~~----~~~--c~w------------~gv~C~-~~~v~~l~l~~~~l~~~~ 87 (621)
....+|++||++||+++.+| +|+.++ .+| |.| .||+|+ .++|+.|+|+++++.|.+
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred ccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 34467999999999999887 675443 356 999 999998 489999999999999999
Q ss_pred cccccCCCCCcEEEc-ccCccCCC--------------------------------------------------------
Q 007025 88 SSSIGNLTNLQLVLL-QNNNISGH-------------------------------------------------------- 110 (621)
Q Consensus 88 ~~~~~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 110 (621)
|+.|++|++|+.|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77765444
Q ss_pred --------------------CCccccccccccccccccccccC-----------------CCCCCCc--ccccchhhhcc
Q 007025 111 --------------------IPTEIGKLSKLLTLDLSNNFFTG-----------------PIPSTVS--HLETLQYLRLN 151 (621)
Q Consensus 111 --------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~l~ 151 (621)
+|..|++|++|+.|+|++|+|+| .+|..++ ++++|+.|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88899999999999999999998 3999988 99999999999
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCC-CCC-CCCCc------------cccceeccCCcccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNN-LSG-PVPSF------------HAKTFNITGNSLIC 200 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~-l~~-~~p~~------------~~~~~~l~~N~~~c 200 (621)
+|++.+.+|..|.++++|+.|+|++|+ |+| .+|.. ..+.++|++|.+..
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ 562 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE 562 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCc
Confidence 999999999999999999999999998 998 66653 23778999998863
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=1.6e-22 Score=227.03 Aligned_cols=168 Identities=24% Similarity=0.339 Sum_probs=150.0
Q ss_pred hHHHHHHHHHHHhCCCCCCC--------CCCCCCCCCCCcce---eeEEeCC-CCEEEEecCCCCCcccccccccCCCCC
Q 007025 30 NYEVQALMGIKDSLHDPHDV--------LNNWDENSVDPCSW---ALVTCSD-GLVTGLGAPSQNLSGTLSSSIGNLTNL 97 (621)
Q Consensus 30 ~~~~~al~~~k~~~~~~~~~--------~~~W~~~~~~~c~w---~gv~C~~-~~v~~l~l~~~~l~~~~~~~~~~l~~L 97 (621)
..|++||.+|+.++.++.+. ..+|+.+ .+||.| .||+|+. ++|+.|+|+++++.|.+|+.|++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 45999999999999876543 3379864 699999 9999975 799999999999999999999999999
Q ss_pred cEEEcccCc-----------------------------------------------------------------------
Q 007025 98 QLVLLQNNN----------------------------------------------------------------------- 106 (621)
Q Consensus 98 ~~L~L~~N~----------------------------------------------------------------------- 106 (621)
++|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999984
Q ss_pred -------cCCCCCccccccccccccccccccccCC-----------------CCCCCc--ccccchhhhcccccccCCCC
Q 007025 107 -------ISGHIPTEIGKLSKLLTLDLSNNFFTGP-----------------IPSTVS--HLETLQYLRLNNNSLTGAIP 160 (621)
Q Consensus 107 -------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p 160 (621)
++| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 445 888999999999999999999986 999999 99999999999999999999
Q ss_pred CCCCCCCCcceEeccCCC-CCC-CCCCcc-----------ccceeccCCccc
Q 007025 161 PSLSNMSQLAFLDLSYNN-LSG-PVPSFH-----------AKTFNITGNSLI 199 (621)
Q Consensus 161 ~~~~~l~~L~~l~l~~N~-l~~-~~p~~~-----------~~~~~l~~N~~~ 199 (621)
..|+++++|++|+|++|+ ++| .+|..+ .+.+++++|.+.
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 999999999999999998 998 777532 367899999886
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=4.6e-22 Score=204.78 Aligned_cols=171 Identities=18% Similarity=0.255 Sum_probs=150.1
Q ss_pred CCCCchHHHHHHHHHHHhC-CCCCCCCCCCC---CCCCCCcceeeEEeC----------CCCEEEEecCCCCCccccccc
Q 007025 25 SPKGVNYEVQALMGIKDSL-HDPHDVLNNWD---ENSVDPCSWALVTCS----------DGLVTGLGAPSQNLSGTLSSS 90 (621)
Q Consensus 25 ~~~~~~~~~~al~~~k~~~-~~~~~~~~~W~---~~~~~~c~w~gv~C~----------~~~v~~l~l~~~~l~~~~~~~ 90 (621)
...+..+|++||++||+++ .|+.+.+.+|. ....++|.|.|+.|. ..+|+.|+|++|++. .+|..
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 3455678999999999998 57877788894 445689999999995 268999999999998 88888
Q ss_pred ccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCC-----
Q 007025 91 IGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSN----- 165 (621)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~----- 165 (621)
++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 89999999999999999999999 88999999999999999999999899988765
Q ss_pred ----CCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 166 ----MSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 166 ----l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+++|+.|+|++|.|+ .+|..+. +.++|++|.+.
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 999999999999999 6665544 67889999875
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=1.6e-20 Score=182.84 Aligned_cols=145 Identities=22% Similarity=0.255 Sum_probs=131.2
Q ss_pred CCCcceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccc
Q 007025 58 VDPCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDL 126 (621)
Q Consensus 58 ~~~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 126 (621)
.+.|+|.+|.|+. ..++.|+|++|++++..|..|..+++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 4889999999973 36899999999999999999999999999999999998666677899999999999
Q ss_pred ccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccccc
Q 007025 127 SNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 127 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~ 201 (621)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++..+. +.++|++|++.|.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999777777899999999999999999 8899999999999999999999987776544 6789999999987
Q ss_pred CC
Q 007025 202 TG 203 (621)
Q Consensus 202 ~~ 203 (621)
|.
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 64
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=4.8e-20 Score=178.31 Aligned_cols=144 Identities=24% Similarity=0.304 Sum_probs=130.8
Q ss_pred CcceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccc
Q 007025 60 PCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSN 128 (621)
Q Consensus 60 ~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 128 (621)
.|.|..|.|+. ..++.|+|++|++++..+..|..+++|+.|+|++|.|++..|..|.++++|++|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 47899999973 3689999999999988888999999999999999999988899999999999999999
Q ss_pred ccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 129 NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 129 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|+|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 999955555678999999999999999988899999999999999999999998876554 678999999999765
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=175.74 Aligned_cols=144 Identities=21% Similarity=0.255 Sum_probs=130.4
Q ss_pred CcceeeEEeCC-----------CCEEEEecCCCCCccccc-ccccCCCCCcEEEcccCccCCCCCccccccccccccccc
Q 007025 60 PCSWALVTCSD-----------GLVTGLGAPSQNLSGTLS-SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLS 127 (621)
Q Consensus 60 ~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 127 (621)
-|.|..+.|+. ..++.|+|++|++++..+ ..|..+++|++|+|++|.|++..|..|.++++|++|+|+
T Consensus 10 ~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 10 RCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred EECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 37899999973 257889999999998865 468999999999999999998888899999999999999
Q ss_pred cccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccC
Q 007025 128 NNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICAT 202 (621)
Q Consensus 128 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~ 202 (621)
+|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.++|++|++.|.|
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9999987778899999999999999999988899999999999999999999998887665 67899999999986
Q ss_pred C
Q 007025 203 G 203 (621)
Q Consensus 203 ~ 203 (621)
.
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 5
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=5.3e-19 Score=169.37 Aligned_cols=145 Identities=23% Similarity=0.257 Sum_probs=128.2
Q ss_pred CCcceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccc
Q 007025 59 DPCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLS 127 (621)
Q Consensus 59 ~~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 127 (621)
..|.|.+|.|+. .+++.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 347899999973 358999999999998877889999999999999999997767778999999999999
Q ss_pred cccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccC
Q 007025 128 NNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICAT 202 (621)
Q Consensus 128 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~ 202 (621)
+|++++..+..+..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.++..+. +.+++++|++.|.+
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999976666789999999999999999977777789999999999999999987776544 67899999998876
Q ss_pred C
Q 007025 203 G 203 (621)
Q Consensus 203 ~ 203 (621)
.
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 263
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=3.6e-19 Score=176.54 Aligned_cols=139 Identities=17% Similarity=0.164 Sum_probs=107.6
Q ss_pred CCCcCCeeeeccccEEEEEEE-cCCcE--EEEEEeccCccc-----------------------chhhHHHHHHHHHhhc
Q 007025 300 NFSSKNLVGKGGFGNVYKGYL-QDGTV--VAVKRLKDGNAI-----------------------GGEIQFQTEVEMISLA 353 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~e~~~l~~l 353 (621)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+..+..+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999998 67888 999987543211 0112578899999999
Q ss_pred ccccc--eeeEEEEecCCceeEEEeeccC-C----ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCceEEccc
Q 007025 354 VHRNL--LRLIGFCMTTTERLLVYPYMSN-G----SVASRLKAKPSLDWATRKRIALGAARGLLYLH-EQCDPKIIHRDV 425 (621)
Q Consensus 354 ~H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH~Dl 425 (621)
.|+++ ..++++ ...++||||+.+ | +|.+.... .++.....++.|++.||.||| +. +|+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---ELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence 98864 334432 367899999943 4 55554432 234567889999999999999 88 9999999
Q ss_pred ccCeEEecCCCceEEeecccceecC
Q 007025 426 KAANILLDEYYEAVVGDFGLAKLLD 450 (621)
Q Consensus 426 kp~NILl~~~~~~kl~Dfgla~~~~ 450 (621)
||+|||++. .++|+|||++....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETT
T ss_pred CHHHEEEcC--cEEEEECcccccCC
Confidence 999999998 99999999997653
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.74 E-value=4.3e-18 Score=168.13 Aligned_cols=128 Identities=23% Similarity=0.248 Sum_probs=111.5
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.|+|++|++.+..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 57889999999998888889999999999999999998888888999999999999999997777788899999999999
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+|+|++..+..|..+++|+.|+|++|+|++.++..+. +.++|++|.+.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 9999976666788899999999999999987775543 67889999875
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=2.3e-18 Score=162.76 Aligned_cols=125 Identities=23% Similarity=0.305 Sum_probs=99.2
Q ss_pred CcceeeEEeCC-----------CCEEEEecCCCCCcccccc-cccCCCCCcEEEcccCccCCCCCccccccccccccccc
Q 007025 60 PCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSS-SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLS 127 (621)
Q Consensus 60 ~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 127 (621)
.|.|..|.|+. ..++.|+|++|++++..+. .|+.+++|++|+|++|.|++..|..|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 37888888873 2577888888888766654 47888888888888888887778888888888888888
Q ss_pred cccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 128 NNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 128 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
+|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 888887777778888888888888888887778888888888888888888887665
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=2.9e-17 Score=162.11 Aligned_cols=131 Identities=24% Similarity=0.277 Sum_probs=120.1
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 47999999999999998899999999999999999999887888999999999999999999766667899999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~ 201 (621)
++|+|++..+..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999977777899999999999999999988876554 6889999999887
No 267
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=3e-17 Score=163.88 Aligned_cols=128 Identities=26% Similarity=0.329 Sum_probs=86.9
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 36667777777766655667777777777777777775444555677777777777777775555566777777777777
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+|++++..|..|..+++|++|+|++|.|++.++..+. +.+++++|.+.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc
Confidence 7777766666667777777777777777765554333 55667777664
No 268
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2.7e-17 Score=155.36 Aligned_cols=127 Identities=23% Similarity=0.349 Sum_probs=114.2
Q ss_pred EEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCc-cccccccccccccccccccCCCCCCCcccccchhhhccc
Q 007025 74 TGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPT-EIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 152 (621)
Q Consensus 74 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 152 (621)
+.|++++|+++ .+|..+.. +|++|+|++|.|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57899999996 77776653 999999999999976664 489999999999999999988899999999999999999
Q ss_pred ccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 153 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|+|++..|..|..+++|++|+|++|+|++.+|..+. +.++|++|++.|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999988888899999999999999999998887655 678999999998764
No 269
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=4.6e-17 Score=151.60 Aligned_cols=125 Identities=24% Similarity=0.268 Sum_probs=86.0
Q ss_pred CcceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccc
Q 007025 60 PCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSN 128 (621)
Q Consensus 60 ~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 128 (621)
.|.|.+|.|+. ..++.|++++|++++..+..|..+++|++|+|++|.|++..+..|.++++|+.|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 47899999974 2466777777777765556667777777777777777755555567777777777777
Q ss_pred ccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 129 NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 129 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
|+|++..+..+..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 77775555556677777777777777775444455667777777777777776655
No 270
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=8.3e-17 Score=152.07 Aligned_cols=125 Identities=23% Similarity=0.335 Sum_probs=105.6
Q ss_pred EEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhccccc
Q 007025 75 GLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 154 (621)
Q Consensus 75 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 154 (621)
.+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3455566666 5565553 68999999999998 788899999999999999999997777889999999999999999
Q ss_pred ccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 155 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9988788899999999999999999977776543 678999999999865
No 271
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.68 E-value=1.3e-17 Score=191.26 Aligned_cols=135 Identities=33% Similarity=0.516 Sum_probs=123.8
Q ss_pred EEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhccccc
Q 007025 75 GLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 154 (621)
Q Consensus 75 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 154 (621)
.+++..|.+.|.+|..++.+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..++++++|+.|||++|+
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 35667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc----cceeccCCcccccCCCCCCCCC
Q 007025 155 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICATGAEEDCFG 210 (621)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~l~~N~~~c~~~~~~~c~~ 210 (621)
++|.+|..+..+++|++|+|++|+|+|.+|.... ....+.||+..|+.+.. .|..
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 9999999999999999999999999999997532 45678899999997654 6643
No 272
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=3.5e-17 Score=168.84 Aligned_cols=142 Identities=14% Similarity=0.136 Sum_probs=100.1
Q ss_pred cCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCccc----c---------hhhHH--------HHHHHHHhhccccc
Q 007025 299 SNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAI----G---------GEIQF--------QTEVEMISLAVHRN 357 (621)
Q Consensus 299 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~---------~~~~~--------~~e~~~l~~l~H~n 357 (621)
.-|.+.+.||+|+||.||+|...+|+.||||+++..... . ..... .+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348899999999999999999989999999988632110 0 01112 23444455553333
Q ss_pred ceeeEEEEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCC-
Q 007025 358 LLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYY- 436 (621)
Q Consensus 358 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~- 436 (621)
+....-+. ....++||||++++.|...... +....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 175 v~vp~p~~--~~~~~LVME~i~G~~L~~l~~~------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 175 FPVPEPIA--QSRHTIVMSLVDALPMRQVSSV------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CSCCCEEE--EETTEEEEECCSCEEGGGCCCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred CCCCeeee--ccCceEEEEecCCccHhhhccc------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence 21111111 1234799999999888765432 13456889999999999998 999999999999998776
Q ss_pred ---------ceEEeecccceecCC
Q 007025 437 ---------EAVVGDFGLAKLLDH 451 (621)
Q Consensus 437 ---------~~kl~Dfgla~~~~~ 451 (621)
.+.|+||+-+....+
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETTS
T ss_pred cccccccccceEEEEeCCcccCCC
Confidence 389999998765443
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.68 E-value=1.2e-16 Score=159.59 Aligned_cols=133 Identities=22% Similarity=0.215 Sum_probs=90.2
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 35667777777777666666677777777777777777655555677777777777777777555555667777777777
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
++|+|++..+..+..+++|+.|++++|+|++.+|..+. +.+++++|++.|.++
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 77777765555666777777777777777766665433 556777777766543
No 274
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.68 E-value=1.1e-18 Score=189.31 Aligned_cols=126 Identities=19% Similarity=0.232 Sum_probs=65.5
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccc-ccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIG-KLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.++.|+|++|++++..|..++.+++|+.|+|++|.|++.+|..+. ++++|+.|+|++|.|++. | .+..+++|+.|+|
T Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~L 198 (487)
T 3oja_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDL 198 (487)
T ss_dssp SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEEC
Confidence 455555555555555555555555555555555555555555443 455555555555555533 2 1223555555555
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~ 201 (621)
++|.|++ +|..+..+++|+.|+|++|.|++. |..+. +.+++++|++.|+
T Consensus 199 s~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~l-p~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 199 SSNKLAF-MGPEFQSAAGVTWISLRNNKLVLI-EKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CSSCCCE-ECGGGGGGTTCSEEECTTSCCCEE-CTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCCCCC-CCHhHcCCCCccEEEecCCcCccc-chhhccCCCCCEEEcCCCCCcCc
Confidence 5555553 333355555555555555555542 22221 3455555555543
No 275
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.67 E-value=4.5e-17 Score=169.77 Aligned_cols=139 Identities=27% Similarity=0.280 Sum_probs=114.8
Q ss_pred cceeeEEeCC-----------CCEEEEecCCCCCccccccccc-CCCCCcEEEcccCccCCCCCcccccccccccccccc
Q 007025 61 CSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIG-NLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSN 128 (621)
Q Consensus 61 c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 128 (621)
|.|..|.|+. ..++.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788888863 2477899999999988888887 899999999999999977777899999999999999
Q ss_pred ccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCcc--------ccceeccCCccc
Q 007025 129 NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH--------AKTFNITGNSLI 199 (621)
Q Consensus 129 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~--------~~~~~l~~N~~~ 199 (621)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++..+ .+.++|++|.+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99997667778889999999999999987778888889999999999999887655443 145677777664
No 276
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.67 E-value=7.8e-17 Score=180.52 Aligned_cols=157 Identities=21% Similarity=0.217 Sum_probs=124.7
Q ss_pred CCCCCCCCCCCC---CCCCccee----eEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCc
Q 007025 45 DPHDVLNNWDEN---SVDPCSWA----LVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNN 106 (621)
Q Consensus 45 ~~~~~~~~W~~~---~~~~c~w~----gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~ 106 (621)
|+.+.+++|+.+ ..+||.+. .|.|+. ..++.|||++|+|++..+..|.++++|++|+|++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 344445555432 23567653 478962 368999999999998888899999999999999999
Q ss_pred cCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCC-CCC
Q 007025 107 ISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPS 185 (621)
Q Consensus 107 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~p~ 185 (621)
|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|.|++. +|.
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 9987788899999999999999999966667899999999999999999977777899999999999999999864 455
Q ss_pred ccc-----cceeccCCccccc
Q 007025 186 FHA-----KTFNITGNSLICA 201 (621)
Q Consensus 186 ~~~-----~~~~l~~N~~~c~ 201 (621)
.+. +.+++++|.+...
T Consensus 168 ~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 168 YFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp GGGGCTTCCEEECCSSCCCEE
T ss_pred hhccchhhhhhcccCcccccc
Confidence 543 6789999988643
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.66 E-value=3.2e-16 Score=156.38 Aligned_cols=128 Identities=22% Similarity=0.234 Sum_probs=76.4
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
+++.|+|++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 62 ~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 141 (270)
T 2o6q_A 62 KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG 141 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECC
Confidence 56666666666665444555666666666666666665545555666666666666666665555555666666666666
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+|+|++..+..|..+++|+.|+|++|.|++.++..+. +.++|++|.+.
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 6666644444456666666666666666655444332 44556666554
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.66 E-value=2.9e-16 Score=158.40 Aligned_cols=130 Identities=22% Similarity=0.227 Sum_probs=79.1
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.|+|++|.+. .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 4555666666655 455556666666666666666665555566666666666666666665444555666666666666
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc----cceeccCCcccccC
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLICAT 202 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~l~~N~~~c~~ 202 (621)
+|+|++..+..|..+++|+.|+|++|+|+..++..+. +.++|++|++.|.|
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 6666644444555666666666666666643333222 45666667666654
No 279
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.5e-16 Score=147.77 Aligned_cols=124 Identities=27% Similarity=0.353 Sum_probs=112.2
Q ss_pred CcceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccc
Q 007025 60 PCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSN 128 (621)
Q Consensus 60 ~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 128 (621)
.|.|..|.|+. ..++.|+|++|+++ .+|..|.++++|+.|+|++|.|++..+..|.++++|+.|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 46788889973 36899999999998 7789999999999999999999988888899999999999999
Q ss_pred ccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 129 NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 129 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.....
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99998888899999999999999999996666679999999999999999986543
No 280
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.64 E-value=6.1e-17 Score=165.29 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=73.9
Q ss_pred CCEEEEecCCCCCcccccccccCCC-CCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLT-NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
..++.|+|++|.+++.+|..++.++ +|++|+|++|.+++.+|..+..++ |+.|+|++|++++.+|..+..+++|+.|+
T Consensus 149 ~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 3566777777777777777777666 677777777776666666666655 66666666666655555555555555555
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
|++|++++.+|. +..+++|++|+|++|+|++.+|..+. +.+++++|.+.
T Consensus 228 L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 228 LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp CCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred CCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 555555544333 44445555555555555544444332 34445555443
No 281
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.64 E-value=2.1e-16 Score=159.06 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=72.1
Q ss_pred CEEEEecCCCC-CcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 72 LVTGLGAPSQN-LSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 72 ~v~~l~l~~~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.++.|+|++|. +....|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 46666666665 54444555666666666666666666555555666666666666666666444444555666666666
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSL 198 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~ 198 (621)
++|+|++..+..+..+++|+.|+|++|.+++..|..+. +.+++++|.+
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 213 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 213 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcC
Confidence 66666544444455555555555555555555444332 3445555544
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.63 E-value=3.4e-16 Score=168.31 Aligned_cols=133 Identities=22% Similarity=0.252 Sum_probs=124.4
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|++.+.+|..++.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+.++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47999999999999999999999999999999999999888999999999999999999999888899999999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
++|++++..|..|..+++|++|+|++|+|++.++..+. +.+++++|++.|.++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999988899999999999999999999987776543 788999999999876
No 283
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.62 E-value=4e-16 Score=158.64 Aligned_cols=129 Identities=21% Similarity=0.249 Sum_probs=75.2
Q ss_pred CCEEEEecCCCCCccccc-ccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccC-CCCCCCcccccchhh
Q 007025 71 GLVTGLGAPSQNLSGTLS-SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG-PIPSTVSHLETLQYL 148 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 148 (621)
..++.|++++|++++..+ ..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++ .+|..+..+++|++|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 356666666666654443 455666666666666666665555556666666666666666654 355556666666666
Q ss_pred hcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 149 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 149 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+|++|++++..|..+..+++|+.|+|++|.+++..+..+. +.+++++|.+.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 6666666655555566666666666666666554443322 45556666553
No 284
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.4e-15 Score=141.55 Aligned_cols=128 Identities=21% Similarity=0.247 Sum_probs=110.6
Q ss_pred EEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhccc
Q 007025 73 VTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 152 (621)
Q Consensus 73 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 152 (621)
.+.+++++++++ .+|..+ .++|+.|+|++|.+++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467899999988 455444 37999999999999977777789999999999999999976667789999999999999
Q ss_pred ccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 153 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|+|++..+..+..+++|+.|+|++|.|++.++..+. +.+++++|++.|.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999977777789999999999999999987776543 678999999988653
No 285
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.61 E-value=1.5e-15 Score=151.98 Aligned_cols=128 Identities=20% Similarity=0.184 Sum_probs=112.9
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58999999999998888899999999999999999997777789999999999999999998777889999999999999
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCC-CCCccc-----cceeccCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~p~~~~-----~~~~l~~N~~~ 199 (621)
+|++++..+..+..+++|+.|++++|.+++. +|..+. +.+++++|.+.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 9999977776899999999999999999874 466544 67888888774
No 286
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.61 E-value=1.7e-15 Score=169.02 Aligned_cols=144 Identities=19% Similarity=0.227 Sum_probs=126.3
Q ss_pred CCCccee----eEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccc
Q 007025 58 VDPCSWA----LVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLL 122 (621)
Q Consensus 58 ~~~c~w~----gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 122 (621)
.+||.|. .|.|+. .+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 3677763 588863 4699999999999999888999999999999999999988898999999999
Q ss_pred ccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCC-CCCCccc-----cceeccCC
Q 007025 123 TLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG-PVPSFHA-----KTFNITGN 196 (621)
Q Consensus 123 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~-~~p~~~~-----~~~~l~~N 196 (621)
+|+|++|++++..|..|.++++|++|+|++|++++..|..++++++|++|++++|.+++ .+|..+. +.+++++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999998889999999999999999999997777889999999999999999986 5677555 67899999
Q ss_pred ccccc
Q 007025 197 SLICA 201 (621)
Q Consensus 197 ~~~c~ 201 (621)
.+...
T Consensus 164 ~l~~~ 168 (606)
T 3vq2_A 164 YIQTI 168 (606)
T ss_dssp CCCEE
T ss_pred cceec
Confidence 87543
No 287
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.60 E-value=9.2e-16 Score=148.11 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=108.7
Q ss_pred CCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 70 DGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 70 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
-..++.|+|++|.+++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 35799999999999998888999999999999999999988888899999999999999999988899999999999999
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999998765
No 288
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.59 E-value=3.4e-15 Score=150.11 Aligned_cols=129 Identities=22% Similarity=0.237 Sum_probs=115.9
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccccc-ccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF-FTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 149 (621)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 368999999999998888889999999999999999998889999999999999999997 8866688899999999999
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
|++|++++..|..+..+++|++|++++|.+++.++..+. +.+++++|.+.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc
Confidence 999999988888899999999999999999987776543 77889999875
No 289
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=6.5e-16 Score=142.41 Aligned_cols=128 Identities=22% Similarity=0.209 Sum_probs=111.4
Q ss_pred CCEEEEecCCCCCc-ccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLS-GTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
..++.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 47899999999998 88999999999999999999999965 7899999999999999999987888888899999999
Q ss_pred cccccccCCC-CCCCCCCCCcceEeccCCCCCCCCC---Cccc-----cceeccCCcccc
Q 007025 150 LNNNSLTGAI-PPSLSNMSQLAFLDLSYNNLSGPVP---SFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 150 l~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~p---~~~~-----~~~~l~~N~~~c 200 (621)
|++|+|++.. +..+..+++|+.|++++|.+++.++ ..+. +.+++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999542 2789999999999999999998766 2222 677888887643
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.59 E-value=1.2e-15 Score=164.12 Aligned_cols=142 Identities=22% Similarity=0.283 Sum_probs=124.4
Q ss_pred CCcceee--EEeCC----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCC-Cccccccccccccc
Q 007025 59 DPCSWAL--VTCSD----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHI-PTEIGKLSKLLTLD 125 (621)
Q Consensus 59 ~~c~w~g--v~C~~----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 125 (621)
..|.|.+ |.|+. .+++.|+|++|++++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4577766 88874 35899999999999999999999999999999999998665 56799999999999
Q ss_pred cccccccCCCCCCCcccccchhhhcccccccCCCCCC--CCCCCCcceEeccCCCCCCCCCCc-cc-----cceeccCCc
Q 007025 126 LSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPS--LSNMSQLAFLDLSYNNLSGPVPSF-HA-----KTFNITGNS 197 (621)
Q Consensus 126 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~l~~~~p~~-~~-----~~~~l~~N~ 197 (621)
|++|++++..|..|.++++|++|+|++|++++.+|.. +..+++|++|+|++|.+++..|.. +. +.+++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999765544 999999999999999999987764 32 778999998
Q ss_pred ccc
Q 007025 198 LIC 200 (621)
Q Consensus 198 ~~c 200 (621)
+..
T Consensus 166 l~~ 168 (455)
T 3v47_A 166 VKS 168 (455)
T ss_dssp BSC
T ss_pred ccc
Confidence 853
No 291
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.58 E-value=8.6e-16 Score=174.28 Aligned_cols=168 Identities=24% Similarity=0.243 Sum_probs=92.6
Q ss_pred CchHHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCcceeeEEeCCCCEEEEecCCCCCcc---------------------
Q 007025 28 GVNYEVQALMGIKDSLHDPH-DVLNNWDENSVDPCSWALVTCSDGLVTGLGAPSQNLSG--------------------- 85 (621)
Q Consensus 28 ~~~~~~~al~~~k~~~~~~~-~~~~~W~~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~--------------------- 85 (621)
-...++++|+++..+...+. ..-++|...+..++.|.+++++..+++.|+|..|++..
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 34567889999988874322 23345755555667888888876666666554443321
Q ss_pred ------cccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCC
Q 007025 86 ------TLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAI 159 (621)
Q Consensus 86 ------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 159 (621)
..+..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|+.|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 22455677788888888888887 67777778888888888888888 77877888888888888888888 67
Q ss_pred CCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 160 PPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 160 p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
|..|+.|++|++|+|++|.|+ .+|..+. +.++|++|++.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 888888888888888888887 4454443 56777888774
No 292
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.58 E-value=9.3e-16 Score=159.28 Aligned_cols=139 Identities=22% Similarity=0.298 Sum_probs=118.9
Q ss_pred CCcceeeEEeC-------------CCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccc
Q 007025 59 DPCSWALVTCS-------------DGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLD 125 (621)
Q Consensus 59 ~~c~w~gv~C~-------------~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 125 (621)
.+|.|.|+ |+ ...++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 67889887 54 13699999999999987777999999999999999999988888899999999999
Q ss_pred cccccccCCCCCCCcccccchhhhcccccccCCCCC--CCCCCCCcceEeccCC-CCCCCCCCccc-----cceeccCCc
Q 007025 126 LSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPP--SLSNMSQLAFLDLSYN-NLSGPVPSFHA-----KTFNITGNS 197 (621)
Q Consensus 126 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N-~l~~~~p~~~~-----~~~~l~~N~ 197 (621)
|++|++++..+..+.++++|++|+|++|+++ .+|. .+..+++|++|++++| .+++..|..+. +.+++++|.
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 9999999544445899999999999999999 4554 7899999999999999 47766665554 678888887
Q ss_pred cc
Q 007025 198 LI 199 (621)
Q Consensus 198 ~~ 199 (621)
+.
T Consensus 186 l~ 187 (353)
T 2z80_A 186 LQ 187 (353)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 293
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=8.1e-16 Score=169.53 Aligned_cols=140 Identities=21% Similarity=0.271 Sum_probs=121.8
Q ss_pred CcceeeEEeCC-------------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccc
Q 007025 60 PCSWALVTCSD-------------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDL 126 (621)
Q Consensus 60 ~c~w~gv~C~~-------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 126 (621)
.|.|.|+ |+. ..++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999998 852 37999999999999999999999999999999999999888899999999999999
Q ss_pred ccccccCCCCCCCcccccchhhhcccccccC-CCCCCCCCCCCcceEeccCCCCCCCCC-Cccc-----cceeccCCccc
Q 007025 127 SNNFFTGPIPSTVSHLETLQYLRLNNNSLTG-AIPPSLSNMSQLAFLDLSYNNLSGPVP-SFHA-----KTFNITGNSLI 199 (621)
Q Consensus 127 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~~p-~~~~-----~~~~l~~N~~~ 199 (621)
++|++++..|..|+++++|++|+|++|++++ .+|..+.++++|+.|++++|.+.+.+| ..+. +.+++++|.+.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999997777779999999999999999986 357889999999999999999555554 3443 67788888875
Q ss_pred c
Q 007025 200 C 200 (621)
Q Consensus 200 c 200 (621)
.
T Consensus 162 ~ 162 (549)
T 2z81_A 162 N 162 (549)
T ss_dssp E
T ss_pred c
Confidence 3
No 294
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.57 E-value=7.6e-15 Score=146.54 Aligned_cols=128 Identities=27% Similarity=0.318 Sum_probs=114.3
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|++.+. +.+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 4799999999999873 47899999999999999999887878899999999999999999777777899999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c 200 (621)
++|+|++..|..+..+++|+.|++++|+|++.++..+. +.+++++|.+..
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999977777789999999999999999988776544 778999998853
No 295
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.57 E-value=1.9e-15 Score=169.30 Aligned_cols=133 Identities=20% Similarity=0.272 Sum_probs=122.0
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCcc-CCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNI-SGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
..+..++++.|.+.+..+..+..++.|+.|+|++|.+ .+.+|..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 4678899999999999999999999999999999975 446788999999999999999999988999999999999999
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc------cceeccCCcccccCC
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICATG 203 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~------~~~~l~~N~~~c~~~ 203 (621)
|++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.++|++|++.|.|.
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999988888999999999999999999999887653 568999999999876
No 296
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.56 E-value=4.2e-15 Score=172.24 Aligned_cols=132 Identities=27% Similarity=0.331 Sum_probs=105.1
Q ss_pred CCEEEEecCCCCCcccccc-cccCCCCCcEEEcccCccC-----CCCCccccccccccccccccccccCCCCCCCccccc
Q 007025 71 GLVTGLGAPSQNLSGTLSS-SIGNLTNLQLVLLQNNNIS-----GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLET 144 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 144 (621)
.+++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.++++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 3566677777777654433 3556777777888887776 344566888999999999999999888888999999
Q ss_pred chhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc--cceeccCCcccccCCC
Q 007025 145 LQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLICATGA 204 (621)
Q Consensus 145 L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~c~~~~ 204 (621)
|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+. +.+++++|++.|.|..
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 99999999999976666555 8899999999999999888765 6789999999998864
No 297
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=6.1e-15 Score=136.21 Aligned_cols=108 Identities=25% Similarity=0.330 Sum_probs=95.0
Q ss_pred EEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhccccc
Q 007025 75 GLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNS 154 (621)
Q Consensus 75 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 154 (621)
.|++++|+++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4566677777 4666653 899999999999998889999999999999999999997777778999999999999999
Q ss_pred ccCCCCCCCCCCCCcceEeccCCCCCCCCCC
Q 007025 155 LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS 185 (621)
Q Consensus 155 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 185 (621)
|++..+..|..+++|+.|+|++|+++...++
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9977777899999999999999999987653
No 298
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.56 E-value=9e-15 Score=147.42 Aligned_cols=126 Identities=25% Similarity=0.221 Sum_probs=94.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+++..+..|..+++|++|+|++|.|++. |. .+.+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 3678888888888888788888888888888888888743 32 267777888888888777 67777777777888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|.+.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 88887766666777777788888888877776665443 56677777765
No 299
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.56 E-value=2.2e-15 Score=147.40 Aligned_cols=127 Identities=18% Similarity=0.233 Sum_probs=111.8
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCc-cCCCCCcccccccccccccccc-ccccCCCCCCCcccccchhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNN-ISGHIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYL 148 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 148 (621)
..++.|+|++|++++..+..|..+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 579999999999998888899999999999999997 8866667899999999999999 99997666789999999999
Q ss_pred hcccccccCCCCCCCCCCCCcc---eEeccCC-CCCCCCCCccc-----c-ceeccCCccc
Q 007025 149 RLNNNSLTGAIPPSLSNMSQLA---FLDLSYN-NLSGPVPSFHA-----K-TFNITGNSLI 199 (621)
Q Consensus 149 ~l~~N~l~~~~p~~~~~l~~L~---~l~l~~N-~l~~~~p~~~~-----~-~~~l~~N~~~ 199 (621)
+|++|++++ +|. +..+++|+ .|++++| .+++.++..+. + .+++++|.+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 999999995 776 88888888 9999999 99877766554 5 7888899875
No 300
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=3.2e-15 Score=166.47 Aligned_cols=153 Identities=14% Similarity=0.103 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCCCCcc----eeeEEeCC------------------CCEEEEecCCCCCcccccccccCCCCCcEEEccc
Q 007025 47 HDVLNNWDENSVDPCS----WALVTCSD------------------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQN 104 (621)
Q Consensus 47 ~~~~~~W~~~~~~~c~----w~gv~C~~------------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~ 104 (621)
...+.+|.+. .+||. |.++.|+. ..+..+++++|.+....+..|..+++|++|+|++
T Consensus 6 ~~~l~~~~~~-~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~ 84 (597)
T 3oja_B 6 RYNVKPRQPE-YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 84 (597)
T ss_dssp -----CCCSE-ECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTT
T ss_pred cccccCCCCC-CcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCC
Confidence 3456788764 35653 76666641 2456677788777766666677888888888888
Q ss_pred CccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 105 NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 105 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
|.|++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|++|+|++|.|++.+|
T Consensus 85 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 85 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 88887777788888888888888888887777777888888888888888885555556788888888888888888777
Q ss_pred Cccc-----cceeccCCcccc
Q 007025 185 SFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 185 ~~~~-----~~~~l~~N~~~c 200 (621)
..+. +.+++++|.+..
T Consensus 165 ~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 165 DTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp TTTTTCTTCCEEECTTSCCSB
T ss_pred hhhhcCCcCcEEECcCCCCCC
Confidence 6544 567788887643
No 301
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.56 E-value=2.9e-15 Score=153.81 Aligned_cols=126 Identities=21% Similarity=0.334 Sum_probs=111.1
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccc---------cccccccccccccccCCCCCCCcc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGK---------LSKLLTLDLSNNFFTGPIPSTVSH 141 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~ 141 (621)
..++.|+|++|.++ .+|..++++++|++|+|++|.+.+.+|..+.. +++|++|+|++|+++ .+|..+.+
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp TTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred CCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC
Confidence 47899999999999 88989999999999999999888899987765 999999999999999 88989999
Q ss_pred cccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 142 LETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 142 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+++|++|+|++|+++ .+|..+..+++|+.|+|++|++.+.+|..+. +.++|++|.+.
T Consensus 205 l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 266 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266 (328)
T ss_dssp CTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTC
T ss_pred CCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCch
Confidence 999999999999999 5677789999999999999999998887655 67888888764
No 302
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.56 E-value=4.9e-15 Score=160.34 Aligned_cols=139 Identities=17% Similarity=0.151 Sum_probs=123.1
Q ss_pred ceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccccc
Q 007025 62 SWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF 130 (621)
Q Consensus 62 ~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 130 (621)
.|..|.|+. ..++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 367888863 368899999999999989999999999999999999998889999999999999999999
Q ss_pred ccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccc
Q 007025 131 FTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 131 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c 200 (621)
+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..|..+. +.++|++|.+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 166 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 166 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc
Confidence 9966666789999999999999999988889999999999999999999987776554 678888887753
No 303
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.56 E-value=6.5e-15 Score=142.14 Aligned_cols=114 Identities=18% Similarity=0.173 Sum_probs=105.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 47999999999999999999999999999999999999666666899999999999999999888999999999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
++|+|++..+..|..+++|+.|+|++|++.....
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 9999998877889999999999999999986443
No 304
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=8.3e-16 Score=138.66 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=102.4
Q ss_pred CCEEEEecCCCCCc-ccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLS-GTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999998 89999999999999999999999965 7899999999999999999987888888899999999
Q ss_pred cccccccCC-CCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 150 LNNNSLTGA-IPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 150 l~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
|++|++++. .|..+..+++|+.|++++|++++.++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999963 34789999999999999999998765
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.55 E-value=8.4e-15 Score=156.83 Aligned_cols=130 Identities=23% Similarity=0.287 Sum_probs=101.6
Q ss_pred CEEEEecCCCCCcccccc-------------------------cccCCCCCcEEEcccCccCCCCCcccccccccccccc
Q 007025 72 LVTGLGAPSQNLSGTLSS-------------------------SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDL 126 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 126 (621)
.++.|+|++|.+....+. .|.++++|++|+|++|.++ .+| .+..+++|+.|+|
T Consensus 137 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~L 214 (440)
T 3zyj_A 137 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDL 214 (440)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEEC
T ss_pred cCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEEC
Confidence 567777777766654443 3556666777777777776 455 4677788888888
Q ss_pred ccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccccc
Q 007025 127 SNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 127 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~ 201 (621)
++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 88888877788888889999999999999888888888999999999999999987776554 6789999999998
Q ss_pred CC
Q 007025 202 TG 203 (621)
Q Consensus 202 ~~ 203 (621)
|.
T Consensus 295 C~ 296 (440)
T 3zyj_A 295 CD 296 (440)
T ss_dssp ST
T ss_pred CC
Confidence 75
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.54 E-value=3.2e-15 Score=166.80 Aligned_cols=132 Identities=21% Similarity=0.231 Sum_probs=82.0
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCC-CCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISG-HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.++.|++++|.+.+..|..+..+++|++|+|++|.+++ .+|..|.++++|+.|+|++|++++..|..+.++++|+.|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 45566666666666666666666666666666666665 35666666666666666666666666666666666666666
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc-----cccceeccCCcccccCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-----HAKTFNITGNSLICATG 203 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-----~~~~~~l~~N~~~c~~~ 203 (621)
++|++++..|..+..+++|+.|+|++|+|+..++.. ..+.+++++|++.|.|+
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 666666665666666666666666666666332221 12455666777666654
No 307
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.2e-14 Score=134.74 Aligned_cols=108 Identities=24% Similarity=0.268 Sum_probs=96.2
Q ss_pred EEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccc
Q 007025 74 TGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNN 153 (621)
Q Consensus 74 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 153 (621)
+.+++++|++. .+|..+. ++|+.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56889999986 6777664 89999999999999888999999999999999999999655566799999999999999
Q ss_pred cccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 154 SLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
+|++..+..|..+++|+.|+|++|+|....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9996666679999999999999999997665
No 308
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.54 E-value=1.8e-14 Score=137.69 Aligned_cols=127 Identities=20% Similarity=0.202 Sum_probs=111.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 47999999999999777778899999999999999999777777899999999999999999777777899999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccccceeccCCccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHAKTFNITGNSLI 199 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~l~~N~~~ 199 (621)
++|+|++..+..+..+++|+.|++++|.+.+..|. .+.+++..|.+.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~--l~~L~~~~n~~~ 178 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG--IRYLSEWINKHS 178 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT--THHHHHHHHHCT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCCC--HHHHHHHHHhCC
Confidence 99999977777789999999999999999988773 245666666653
No 309
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.53 E-value=1.7e-14 Score=140.14 Aligned_cols=113 Identities=21% Similarity=0.185 Sum_probs=104.9
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|+|....+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 47999999999998777778899999999999999999877777899999999999999999 89999999999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 184 (621)
++|+|++..+..|..+++|+.|+|++|.+++..+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999997767789999999999999999998776
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=1.4e-14 Score=161.57 Aligned_cols=138 Identities=19% Similarity=0.143 Sum_probs=123.3
Q ss_pred eeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccc
Q 007025 63 WALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFF 131 (621)
Q Consensus 63 w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 131 (621)
+..|.|+. ..++.|+|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 34588862 4699999999999999999999999999999999999988899999999999999999999
Q ss_pred cCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCC-CCCccc----cceeccCCcccc
Q 007025 132 TGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA----KTFNITGNSLIC 200 (621)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~p~~~~----~~~~l~~N~~~c 200 (621)
++..|..|.++++|++|+|++|++++..|..+.++++|++|++++|.+++. +|.... +.+++++|.+..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 988899999999999999999999977688899999999999999999984 354432 788999998753
No 311
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.53 E-value=1.7e-14 Score=163.20 Aligned_cols=140 Identities=23% Similarity=0.225 Sum_probs=120.1
Q ss_pred cceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccc
Q 007025 61 CSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNN 129 (621)
Q Consensus 61 c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 129 (621)
|.++.|.|+. .+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4455577752 47999999999999888888999999999999999999888999999999999999999
Q ss_pred cccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccc
Q 007025 130 FFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 130 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c 200 (621)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++.+|..+. +.+++++|.+..
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 159 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA 159 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc
Confidence 99955555799999999999999999977778899999999999999999988877654 678888887743
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.52 E-value=1.8e-14 Score=154.18 Aligned_cols=138 Identities=20% Similarity=0.185 Sum_probs=116.5
Q ss_pred eeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccc
Q 007025 63 WALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFF 131 (621)
Q Consensus 63 w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 131 (621)
|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 66788863 3588899999999999999999999999999999999988788999999999999999999
Q ss_pred cCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCC-ccc-----cceeccCCcccc
Q 007025 132 TGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS-FHA-----KTFNITGNSLIC 200 (621)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~-----~~~~l~~N~~~c 200 (621)
++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+..+.++. .+. +.++|++|.+..
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 966666899999999999999999977677888999999999998544434433 332 677888887753
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.52 E-value=1.5e-14 Score=155.50 Aligned_cols=138 Identities=20% Similarity=0.208 Sum_probs=118.4
Q ss_pred eeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccc
Q 007025 63 WALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFF 131 (621)
Q Consensus 63 w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 131 (621)
|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56788863 3689999999999999999999999999999999999988889999999999999999999
Q ss_pred cCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCC-ccc-----cceeccCCcccc
Q 007025 132 TGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPS-FHA-----KTFNITGNSLIC 200 (621)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~-----~~~~l~~N~~~c 200 (621)
++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+..+.++. .+. +.++|++|.+..
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 977777799999999999999999976667899999999999998544334433 332 678888888754
No 314
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.52 E-value=9.6e-15 Score=153.77 Aligned_cols=130 Identities=15% Similarity=0.138 Sum_probs=109.3
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+++++.+....+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 35778889888888655566788999999999999999777778999999999999999999877888999999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c 200 (621)
++|+++...+..|..+++|++|++++|.+++..|..+. +.+++++|.+..
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 99999944444568899999999999999988776554 678888888753
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.52 E-value=1.5e-14 Score=155.44 Aligned_cols=132 Identities=22% Similarity=0.278 Sum_probs=105.7
Q ss_pred CCEEEEecCCCCCcccccc-------------------------cccCCCCCcEEEcccCccCCCCCccccccccccccc
Q 007025 71 GLVTGLGAPSQNLSGTLSS-------------------------SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLD 125 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 125 (621)
.+++.|+|++|.+....+. .|..+++|++|+|++|.+++ +| .+..+++|+.|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEE
Confidence 3677788888777754443 35566677777777777774 44 477788888888
Q ss_pred cccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccc
Q 007025 126 LSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 126 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c 200 (621)
|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 888888877788899999999999999999988888899999999999999999987776654 678999999999
Q ss_pred cCCC
Q 007025 201 ATGA 204 (621)
Q Consensus 201 ~~~~ 204 (621)
.|..
T Consensus 305 dC~~ 308 (452)
T 3zyi_A 305 DCDI 308 (452)
T ss_dssp STTT
T ss_pred CCCc
Confidence 9863
No 316
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.52 E-value=1.3e-14 Score=145.11 Aligned_cols=128 Identities=23% Similarity=0.307 Sum_probs=91.9
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCC-CCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP-IPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 149 (621)
..++.|+|++|.+++..+..|.++++|++|+|++|.+++..+..+.++++|++|+|++|++++. +|..+.++++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 4788889999988888878888888888888888888876666788888888888888888853 688888888888888
Q ss_pred cccccccCCCCCCCCCCCCcc----eEeccCCCCCCCCCCccc----cceeccCCcc
Q 007025 150 LNNNSLTGAIPPSLSNMSQLA----FLDLSYNNLSGPVPSFHA----KTFNITGNSL 198 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~----~l~l~~N~l~~~~p~~~~----~~~~l~~N~~ 198 (621)
|++|++++..+..+..+++|+ .|++++|.+++..+..+. +.+++++|.+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l 212 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQL 212 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCce
Confidence 888888765555555444444 455555555544333322 3444444444
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.51 E-value=1.1e-14 Score=162.52 Aligned_cols=131 Identities=24% Similarity=0.299 Sum_probs=79.9
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCC---CCccccccccccccccccccccCCCCCCCcccccchhh
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH---IPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 148 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 148 (621)
.++.|++++|.+.+..|..++.+++|++|+|++|.+++. .+..+..+++|+.|+|++|++++..|..|..+++|+.|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 455555555555555555555566666666666665541 22345566666666666666665556666666666666
Q ss_pred hcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 149 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 149 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
+|++|++++..|..+..+++| .|++++|++++.+|..+. +.+++++|++.|.|.
T Consensus 506 ~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 666666666666666666666 666666666666655433 566777777776543
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.51 E-value=1.4e-14 Score=160.35 Aligned_cols=132 Identities=20% Similarity=0.278 Sum_probs=80.2
Q ss_pred CEEEEecCCCCCccccc-ccccCCCCCcEEEcccCccCCCCCcccccccccccccccccccc-CCCCCCCcccccchhhh
Q 007025 72 LVTGLGAPSQNLSGTLS-SSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT-GPIPSTVSHLETLQYLR 149 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ 149 (621)
.++.|++++|.+.+..+ ..+..+++|++|+|++|.+++..|..|.++++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 34444444444444433 34555666666666666666556666666666666666666665 45666666666666666
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|++|++++..|..+..+++|+.|++++|+|++.+|..+. +.+++++|++.|.++
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 666666665566666666666666666666666555433 456666666666543
No 319
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.50 E-value=3.4e-14 Score=146.10 Aligned_cols=137 Identities=24% Similarity=0.335 Sum_probs=119.0
Q ss_pred cceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccc
Q 007025 61 CSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNN 129 (621)
Q Consensus 61 c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 129 (621)
|.|..+.|+. ..++.|+|++|++.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999973 36899999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCC--CCCCccc----cceeccCCcccc
Q 007025 130 FFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG--PVPSFHA----KTFNITGNSLIC 200 (621)
Q Consensus 130 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~p~~~~----~~~~l~~N~~~c 200 (621)
+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++. ..|..+. +.+++++|.+..
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 186 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc
Confidence 999 7777765 899999999999996666679999999999999999963 5555443 677888888753
No 320
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=4e-14 Score=130.66 Aligned_cols=104 Identities=25% Similarity=0.254 Sum_probs=93.4
Q ss_pred CcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccC
Q 007025 97 LQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 176 (621)
Q Consensus 97 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 176 (621)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 5887764 8999999999999988899999999999999999999977777789999999999999
Q ss_pred CCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 177 NNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 177 N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|+|++.++..+. +.++|++|++.|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999988876554 688999999998864
No 321
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.50 E-value=1.9e-14 Score=166.70 Aligned_cols=139 Identities=24% Similarity=0.213 Sum_probs=107.4
Q ss_pred cceeeEEeCCCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCC-CccccccccccccccccccccCCCCCCC
Q 007025 61 CSWALVTCSDGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHI-PTEIGKLSKLLTLDLSNNFFTGPIPSTV 139 (621)
Q Consensus 61 c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 139 (621)
|.|..|.+-..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 456666665568888999999998888888888888888888888665555 6778888888888888888887778888
Q ss_pred cccccchhhhcccccccCCCCCC--CCCCCCcceEeccCCCCCCCCCC-ccc-----cceeccCCccc
Q 007025 140 SHLETLQYLRLNNNSLTGAIPPS--LSNMSQLAFLDLSYNNLSGPVPS-FHA-----KTFNITGNSLI 199 (621)
Q Consensus 140 ~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~l~~~~p~-~~~-----~~~~l~~N~~~ 199 (621)
.++++|++|+|++|.+++.+|.. +.++++|+.|+|++|.+++..+. .+. +.++|++|.+.
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 88888888888888888766654 77888888888888888776542 332 56777777664
No 322
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.49 E-value=2.1e-14 Score=145.80 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=113.7
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCC-ccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIP-TEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
..++.|+|++|.+. .+|..+..+++|++|+|++|.+++..+ ..+.++++|++|+|++|.+++..|..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 57899999999988 567779999999999999999996554 5789999999999999999988888899999999999
Q ss_pred cccccccC-CCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccccc
Q 007025 150 LNNNSLTG-AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 150 l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~ 201 (621)
|++|.+++ .+|..+..+++|+.|+|++|.|++.+|..+. +.+++++|.+...
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 99999986 5788999999999999999999988776654 6789999988643
No 323
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.49 E-value=1.7e-14 Score=149.32 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=104.8
Q ss_pred cceeeEEeCCCCEEEEecCCC-CCcccccccccCCCCCcEEEccc-CccCCCCCccccccccccccccccccccCCCCCC
Q 007025 61 CSWALVTCSDGLVTGLGAPSQ-NLSGTLSSSIGNLTNLQLVLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPST 138 (621)
Q Consensus 61 c~w~gv~C~~~~v~~l~l~~~-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 138 (621)
|.|.+|.|+ ++ +|+ .+|. |..+++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++..|..
T Consensus 8 C~~~~v~~~----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECC----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcC----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 888777775 34 566 4777 99999999999996 9999877789999999999999999999988999
Q ss_pred CcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc-cc-----cceeccCCcccccCC
Q 007025 139 VSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-HA-----KTFNITGNSLICATG 203 (621)
Q Consensus 139 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~-----~~~~l~~N~~~c~~~ 203 (621)
|.+|++|+.|+|++|+|++..+..+..++ |+.|+|++|.|.....-. +. ....+..+.+.|...
T Consensus 76 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp GGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred hcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 99999999999999999966556666665 999999999998654311 11 223344566677644
No 324
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.48 E-value=8.5e-15 Score=166.07 Aligned_cols=126 Identities=27% Similarity=0.385 Sum_probs=115.7
Q ss_pred CCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 70 DGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 70 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
...++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 357999999999998 78888889999999999999999 89999999999999999999999 8899999999999999
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc------cceeccCCccc
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLI 199 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~------~~~~l~~N~~~ 199 (621)
|++|.|+ .+|..|+.|++|+.|+|++|.|++.+|..+. ..++|++|.+.
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~ 354 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPE 354 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCccc
Confidence 9999998 8899999999999999999999999987764 23578888774
No 325
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.48 E-value=4.3e-14 Score=145.23 Aligned_cols=137 Identities=26% Similarity=0.373 Sum_probs=117.4
Q ss_pred CcceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccc
Q 007025 60 PCSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSN 128 (621)
Q Consensus 60 ~c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 128 (621)
.|.|+.+.|+. ..++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46899999973 3688899999999988888999999999999999999988899999999999999999
Q ss_pred ccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCC--CCCCccc-----cceeccCCccc
Q 007025 129 NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG--PVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 129 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~p~~~~-----~~~~l~~N~~~ 199 (621)
|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..+..+. +.+++++|.+.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 9999 6777665 789999999999997777778899999999999999964 4454433 67788888774
No 326
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=6.6e-14 Score=155.85 Aligned_cols=130 Identities=19% Similarity=0.119 Sum_probs=115.8
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47999999999999998899999999999999999999988888999999999999999999555555799999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc--cceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~c 200 (621)
++|.|++..|..|..+++|+.|+|++|.|++..+..+. +.+++++|.+..
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccc
Confidence 99999988888999999999999999999986554444 567788877643
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.48 E-value=8.4e-14 Score=154.00 Aligned_cols=130 Identities=20% Similarity=0.177 Sum_probs=113.1
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46889999999999888889999999999999999999877888999999999999999999777788999999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCC-CCCCccc-----cceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSG-PVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~-~~p~~~~-----~~~~l~~N~~~c 200 (621)
++|++++..+..++++++|++|++++|.+++ .+|..+. +.+++++|.+..
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~ 163 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce
Confidence 9999996555578999999999999999987 4576544 678888888754
No 328
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=8.6e-14 Score=128.93 Aligned_cols=103 Identities=29% Similarity=0.323 Sum_probs=91.7
Q ss_pred cEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCC
Q 007025 98 QLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN 177 (621)
Q Consensus 98 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 177 (621)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 78999999997 7887775 89999999999999888999999999999999999999766667899999999999999
Q ss_pred CCCCCCCCccc-----cceeccCCcccccCC
Q 007025 178 NLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 178 ~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
+|++.++..+. +.++|++|++.|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99987776444 678999999988753
No 329
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.47 E-value=2.3e-14 Score=156.98 Aligned_cols=134 Identities=22% Similarity=0.406 Sum_probs=103.3
Q ss_pred CCCCCCCCCCCc-----ceeeE-EeCCCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccc
Q 007025 50 LNNWDENSVDPC-----SWALV-TCSDGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLT 123 (621)
Q Consensus 50 ~~~W~~~~~~~c-----~w~gv-~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 123 (621)
+.+|.. +.+|| .|.|+ .|..++++.|+|++|+|++ +|..+. ++|++|+|++|.|+ .+| ..+++|++
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 445644 34778 79999 8987899999999999997 777663 78999999999998 677 45788999
Q ss_pred cccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc--cceeccCCcccc
Q 007025 124 LDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLIC 200 (621)
Q Consensus 124 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~c 200 (621)
|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|.... +.++|++|.+..
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC
Confidence 9999999985 777 655 88888888888885 665 56788888888888886 443322 667778887654
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.47 E-value=3.5e-14 Score=153.65 Aligned_cols=131 Identities=21% Similarity=0.179 Sum_probs=102.2
Q ss_pred EEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhccc
Q 007025 73 VTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNN 152 (621)
Q Consensus 73 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 152 (621)
++.|++++|++.+.+|..+....+|+.|+|++|.+++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 44444444444444444444444666666667777744335688899999999999999977778899999999999999
Q ss_pred ccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccccCC
Q 007025 153 NSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICATG 203 (621)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~~~ 203 (621)
|++++..|..|..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|.
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 999988899999999999999999999987776554 678999999999865
No 331
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.46 E-value=6.1e-14 Score=158.65 Aligned_cols=133 Identities=21% Similarity=0.223 Sum_probs=98.4
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCC--------CccccccccccccccccccccCCCCCCCcccc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHI--------PTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLE 143 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 143 (621)
.++.|+|++|++++..+..|..+++|++|+|++|.+++.. +..|.++++|+.|+|++|+++...+..|.+++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 5777777777777666667777777777777777776431 12367778888888888888833334578888
Q ss_pred cchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc------cceeccCCcccccCCC
Q 007025 144 TLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA------KTFNITGNSLICATGA 204 (621)
Q Consensus 144 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~------~~~~l~~N~~~c~~~~ 204 (621)
+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.+|..+. +.+++++|++.|.|..
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 888888888888866566677888888888888888887765332 6788899999988763
No 332
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.46 E-value=1e-14 Score=163.50 Aligned_cols=137 Identities=21% Similarity=0.316 Sum_probs=122.8
Q ss_pred cceeeEEeC---CCCEEEEecCCCCCccc-----------------cccccc--CCCCCcEEEcccCccCCCCCcccccc
Q 007025 61 CSWALVTCS---DGLVTGLGAPSQNLSGT-----------------LSSSIG--NLTNLQLVLLQNNNISGHIPTEIGKL 118 (621)
Q Consensus 61 c~w~gv~C~---~~~v~~l~l~~~~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 118 (621)
+...|+.-. -..++.|+|++|.+++. +|..++ ++++|++|+|++|.+.|.+|..|+++
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 455664321 25799999999999996 999999 99999999999999999999999999
Q ss_pred cccccccccccc-ccC-CCCCCCccc------ccchhhhcccccccCCCCC--CCCCCCCcceEeccCCCCCCCCCCccc
Q 007025 119 SKLLTLDLSNNF-FTG-PIPSTVSHL------ETLQYLRLNNNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVPSFHA 188 (621)
Q Consensus 119 ~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~p~~~~ 188 (621)
++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .++++++|+.|++++|.++|.+| .+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 899988887 99999999999999 8998 89999999999999999998888 444
Q ss_pred -----cceeccCCccc
Q 007025 189 -----KTFNITGNSLI 199 (621)
Q Consensus 189 -----~~~~l~~N~~~ 199 (621)
+.+++++|.+.
T Consensus 351 ~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT 366 (636)
T ss_dssp EEEEESEEECCSSEEE
T ss_pred CCCCCCEEECCCCccc
Confidence 67899999886
No 333
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.46 E-value=3.8e-14 Score=155.91 Aligned_cols=109 Identities=26% Similarity=0.283 Sum_probs=100.3
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999996 565 999999999999999999 889999999999999999999995 77 89999999999999
Q ss_pred cccccCCC-CCCCCCCCCcceEeccCCCCCCCCCC
Q 007025 152 NNSLTGAI-PPSLSNMSQLAFLDLSYNNLSGPVPS 185 (621)
Q Consensus 152 ~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~p~ 185 (621)
+|+|++.. |..+..+++|+.|+|++|+|++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999776 99999999999999999999987764
No 334
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.46 E-value=1.5e-13 Score=144.65 Aligned_cols=128 Identities=20% Similarity=0.162 Sum_probs=113.5
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCC-CCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS-TVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 149 (621)
..++.|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|. .|.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 47999999999999888889999999999999999999888888999999999999999999 5555 468999999999
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc--cceeccCCccc
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLI 199 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~ 199 (621)
|++|++++..|..+..+++|+.|++++|.+++.....+. +.+++++|.+.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 999999988888899999999999999999976444333 66788888764
No 335
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.45 E-value=3.7e-14 Score=134.32 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=72.1
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
+++.|++++|++. .+| .+..+++|++|+|++|.++ .+..+.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4566666666666 344 4666666666666666554 22356666666666666666665556666666666666666
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCC-CCCCCCCcc----ccceeccCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNN-LSGPVPSFH----AKTFNITGNSLI 199 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~p~~~----~~~~~l~~N~~~ 199 (621)
+|++++..|..+..+++|+.|++++|. ++. +|... .+.+++++|.+.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITD-IMPLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CGGGGGCSSCCEEECTTBCCC
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccc-cHhhcCCCCCCEEECCCCCCc
Confidence 666665555566666666666666665 443 33211 145566666553
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.45 E-value=5.7e-14 Score=153.68 Aligned_cols=108 Identities=26% Similarity=0.318 Sum_probs=75.8
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCC--CCCccccccccccccccccccccCCCCCC-Ccccccchh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFTGPIPST-VSHLETLQY 147 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~ 147 (621)
..++.|++++|.+++.+|..++.+++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 467888888888888788888888888888888888875 45566778888888888888888656653 566666666
Q ss_pred hhcccccccCCCCCCCCCCCCcceEeccCCCCC
Q 007025 148 LRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 148 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 180 (621)
|+|++|++++.+|..+. ++|+.|+|++|+|+
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 66666666555544432 45555555555555
No 337
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.44 E-value=1.1e-13 Score=152.82 Aligned_cols=132 Identities=23% Similarity=0.303 Sum_probs=81.8
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCC--CCccccccccccccccccccccCCCCCC-Ccccccchh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH--IPTEIGKLSKLLTLDLSNNFFTGPIPST-VSHLETLQY 147 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~ 147 (621)
..++.|++++|.+++.+|..++++++|++|+|++|++++. +|..|.++++|++|+|++|++++.+|.. +..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 4677888888888877787888888888888888888752 2355777788888888888887645543 555555555
Q ss_pred hhcccccccCC---------------------CCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccccc
Q 007025 148 LRLNNNSLTGA---------------------IPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 148 L~l~~N~l~~~---------------------~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c~ 201 (621)
|+|++|+|++. +|..+..+++|+.|+|++|+|++.++..+. +.+++++|++.|.
T Consensus 433 L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp EECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred EECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 55555555444 444444555555555555555533332121 3455555555554
Q ss_pred C
Q 007025 202 T 202 (621)
Q Consensus 202 ~ 202 (621)
|
T Consensus 513 c 513 (562)
T 3a79_B 513 C 513 (562)
T ss_dssp H
T ss_pred c
Confidence 3
No 338
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.44 E-value=8.5e-14 Score=153.86 Aligned_cols=125 Identities=21% Similarity=0.161 Sum_probs=108.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|++++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57899999999999888889999999999999999999888999999999999999999999 77777 8999999999
Q ss_pred ccccccC-CCCCCCCCCCCcceEeccCCCCCCCCCCccc----cceeccCCcc
Q 007025 151 NNNSLTG-AIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSL 198 (621)
Q Consensus 151 ~~N~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~l~~N~~ 198 (621)
++|++++ .+|..|.++++|++|++++|.|++.....+. +.+++++|.+
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccc
Confidence 9999996 3468899999999999999999863322211 6678888877
No 339
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.44 E-value=8.8e-14 Score=144.80 Aligned_cols=133 Identities=21% Similarity=0.177 Sum_probs=116.3
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 47999999999999888899999999999999999999877778999999999999999999888899999999999999
Q ss_pred ccccccCCCCCCC---CCCCCcceEeccCCCCCCCCCCccc-------cceeccCCcccccCC
Q 007025 151 NNNSLTGAIPPSL---SNMSQLAFLDLSYNNLSGPVPSFHA-------KTFNITGNSLICATG 203 (621)
Q Consensus 151 ~~N~l~~~~p~~~---~~l~~L~~l~l~~N~l~~~~p~~~~-------~~~~l~~N~~~c~~~ 203 (621)
++|+|++..+..| ..+++|+.|+|++|+|++.++..+. +.++|++|++.|.|.
T Consensus 144 ~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 144 SQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999995433444 5799999999999999976654332 568999999999864
No 340
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.43 E-value=6.7e-14 Score=132.49 Aligned_cols=124 Identities=15% Similarity=0.248 Sum_probs=106.2
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.+++.|++++|.+. .++.+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999665 3357999999999999999999878899999999999999999999888889999999999999
Q ss_pred cccc-ccCCCCCCCCCCCCcceEeccCCCCCCCCCCc-c--ccceeccCCcc
Q 007025 151 NNNS-LTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-H--AKTFNITGNSL 198 (621)
Q Consensus 151 ~~N~-l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~--~~~~~l~~N~~ 198 (621)
++|+ ++ .+| .+..+++|+.|++++|.+++..+-. + .+.+++++|++
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC--
T ss_pred cCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCccc
Confidence 9998 55 666 6899999999999999999754211 1 27789999986
No 341
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.43 E-value=7.8e-14 Score=144.71 Aligned_cols=127 Identities=21% Similarity=0.214 Sum_probs=111.2
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCC--CCcccccchhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS--TVSHLETLQYL 148 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L 148 (621)
.+++.|+|++|++++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|+++ .+|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 57999999999999988899999999999999999999654555899999999999999999 5555 78999999999
Q ss_pred hcccc-cccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcc
Q 007025 149 RLNNN-SLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSL 198 (621)
Q Consensus 149 ~l~~N-~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~ 198 (621)
+|++| .+++..|..+..+++|+.|++++|.+++..|..+. +.+++++|.+
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999 47766678899999999999999999988787665 5677888765
No 342
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.42 E-value=8.2e-14 Score=142.31 Aligned_cols=106 Identities=25% Similarity=0.183 Sum_probs=49.7
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCc-ccccchhhhc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS-HLETLQYLRL 150 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l 150 (621)
.++.|++++|++++..+.. +++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+|
T Consensus 100 ~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 4444555555554443322 34455555555555544444455555555555555555544333332 3455555555
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP 182 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 182 (621)
++|+|++. |. ...+++|+.|+|++|+|++.
T Consensus 177 ~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE
T ss_pred CCCcCccc-cc-ccccccCCEEECCCCcCCcc
Confidence 55555422 21 12244555555555555443
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.42 E-value=7.9e-14 Score=141.93 Aligned_cols=127 Identities=20% Similarity=0.209 Sum_probs=83.0
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCC--C--CccccccccccccccccccccCCCCC----CCccc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGH--I--PTEIGKLSKLLTLDLSNNFFTGPIPS----TVSHL 142 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l 142 (621)
.+++.|+|++|++.+..+..|+.+++|++|+|++|++.+. + +..+.++++|++|+|++|+++ .+|. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 3567777777777766667777777777777777776531 1 222356777777777777776 3333 23566
Q ss_pred ccchhhhcccccccCCCCCCCCCC---CCcceEeccCCCCCCCCCCccc---cceeccCCccc
Q 007025 143 ETLQYLRLNNNSLTGAIPPSLSNM---SQLAFLDLSYNNLSGPVPSFHA---KTFNITGNSLI 199 (621)
Q Consensus 143 ~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~l~l~~N~l~~~~p~~~~---~~~~l~~N~~~ 199 (621)
++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+. +|..+. +.++|++|.+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLPAKLRVLDLSSNRLN 285 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCCSCCSCEECCSCCCC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhcCCCCEEECCCCcCC
Confidence 777777777777776666666665 577777777777773 343322 56677777764
No 344
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.42 E-value=2.9e-13 Score=138.94 Aligned_cols=125 Identities=23% Similarity=0.286 Sum_probs=79.8
Q ss_pred CCEEEEecCCCCCcc--cccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhh
Q 007025 71 GLVTGLGAPSQNLSG--TLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYL 148 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 148 (621)
..++.|++++|.+.. ..+..+..+++|++|+|++|.++ .+|..+. ++|+.|+|++|++++..|..+..+++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 467778888887753 56667777777777777777776 3554443 566666666666665556666666666666
Q ss_pred hcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 149 RLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 149 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
+|++|++++..+..+..+++|+.|+|++|+|+ .+|..+. +.+++++|++.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCC
Confidence 66666666555556666666666666666666 3333222 45666666654
No 345
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.42 E-value=1.3e-13 Score=134.77 Aligned_cols=127 Identities=17% Similarity=0.176 Sum_probs=109.7
Q ss_pred CCEEEEecCCCC-CcccccccccCCCCCcEEEccc-CccCCCCCccccccccccccccccccccCCCCCCCcccccch--
Q 007025 71 GLVTGLGAPSQN-LSGTLSSSIGNLTNLQLVLLQN-NNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQ-- 146 (621)
Q Consensus 71 ~~v~~l~l~~~~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-- 146 (621)
.+++.|++++|+ +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 479999999997 8877777899999999999999 99997777889999999999999999995 776 88888888
Q ss_pred -hhhcccc-cccCCCCCCCCCCCCcc-eEeccCCCCCCCCCCccc----cceeccCCc-cc
Q 007025 147 -YLRLNNN-SLTGAIPPSLSNMSQLA-FLDLSYNNLSGPVPSFHA----KTFNITGNS-LI 199 (621)
Q Consensus 147 -~L~l~~N-~l~~~~p~~~~~l~~L~-~l~l~~N~l~~~~p~~~~----~~~~l~~N~-~~ 199 (621)
.|+|++| ++++..+..|..+++|+ .|++++|.++..++..+. +.+++++|+ +.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~ 193 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLT 193 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCC
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcc
Confidence 9999999 99976667799999999 999999999954444333 678899995 65
No 346
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.42 E-value=2.2e-14 Score=146.17 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=80.3
Q ss_pred CEEEEecCCCCCcccccccc--cCCCCCcEEEcccCccCCCCCcccccc-----ccccccccccccccCCCCCCCccccc
Q 007025 72 LVTGLGAPSQNLSGTLSSSI--GNLTNLQLVLLQNNNISGHIPTEIGKL-----SKLLTLDLSNNFFTGPIPSTVSHLET 144 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 144 (621)
+++.|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..+.++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 56667777777776666655 6677777777777777655 6666665 67777777777777666666777777
Q ss_pred chhhhcccccccCC--CCCCC--CCCCCcceEeccCCCCCCC--CCCc------cccceeccCCccc
Q 007025 145 LQYLRLNNNSLTGA--IPPSL--SNMSQLAFLDLSYNNLSGP--VPSF------HAKTFNITGNSLI 199 (621)
Q Consensus 145 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~l~l~~N~l~~~--~p~~------~~~~~~l~~N~~~ 199 (621)
|++|+|++|++.+. +|..+ ..+++|+.|+|++|.|++. ++.. ..+.+++++|.+.
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 241 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLR 241 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 77777777776544 22222 5666777777777776631 1111 2256666666654
No 347
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=5.6e-14 Score=161.11 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=117.5
Q ss_pred cceeeEEeC---CCCEEEEecCCCCCcc-----------------ccccccc--CCCCCcEEEcccCccCCCCCcccccc
Q 007025 61 CSWALVTCS---DGLVTGLGAPSQNLSG-----------------TLSSSIG--NLTNLQLVLLQNNNISGHIPTEIGKL 118 (621)
Q Consensus 61 c~w~gv~C~---~~~v~~l~l~~~~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 118 (621)
+...|+.-. -.+++.|+|++|++++ .+|..++ ++++|++|+|++|.+.+.+|..|++|
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 455555332 2579999999999998 4999988 99999999999999999999999999
Q ss_pred cccccccccccc-ccC-CCCCCCcccc-------cchhhhcccccccCCCCC--CCCCCCCcceEeccCCCCCCCCCCcc
Q 007025 119 SKLLTLDLSNNF-FTG-PIPSTVSHLE-------TLQYLRLNNNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVPSFH 187 (621)
Q Consensus 119 ~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~p~~~ 187 (621)
++|+.|+|++|+ ++| .+|..+++++ +|+.|+|++|+|+ .+|. .+.++++|+.|+|++|+|+ .+| .+
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~ 591 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AF 591 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hh
Confidence 999999999998 998 7888777666 9999999999999 8888 8999999999999999999 676 33
Q ss_pred c-----cceeccCCccc
Q 007025 188 A-----KTFNITGNSLI 199 (621)
Q Consensus 188 ~-----~~~~l~~N~~~ 199 (621)
. +.++|++|.+.
T Consensus 592 ~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 592 GTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CTTSEESEEECCSSCCS
T ss_pred cCCCcceEEECcCCccc
Confidence 3 67888999876
No 348
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=5.8e-14 Score=130.37 Aligned_cols=124 Identities=19% Similarity=0.173 Sum_probs=100.6
Q ss_pred CCEEEEecCCCCCcccccccccCCC-CCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLT-NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
..++.|++++|+++. +|. +..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 378999999999994 454 55555 999999999999965 6899999999999999999954444458999999999
Q ss_pred cccccccCCCCC--CCCCCCCcceEeccCCCCCCCCCC---ccc-----cceeccCCccc
Q 007025 150 LNNNSLTGAIPP--SLSNMSQLAFLDLSYNNLSGPVPS---FHA-----KTFNITGNSLI 199 (621)
Q Consensus 150 l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~p~---~~~-----~~~~l~~N~~~ 199 (621)
|++|+|+ .+|. .+..+++|+.|++++|+++..++. .+. +.+++++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999997 6776 789999999999999999854332 122 66777777653
No 349
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.40 E-value=1e-13 Score=127.63 Aligned_cols=111 Identities=24% Similarity=0.203 Sum_probs=98.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCC-CCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPI-PSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ 149 (621)
..++.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+|++|++++.. +..+..+++|+.|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4799999999999976 88999999999999999999878888888999999999999999532 27899999999999
Q ss_pred cccccccCCCC---CCCCCCCCcceEeccCCCCCCCC
Q 007025 150 LNNNSLTGAIP---PSLSNMSQLAFLDLSYNNLSGPV 183 (621)
Q Consensus 150 l~~N~l~~~~p---~~~~~l~~L~~l~l~~N~l~~~~ 183 (621)
|++|.+++..+ ..+..+++|+.|++++|.+...+
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 99999995544 37899999999999999998543
No 350
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.40 E-value=6.5e-14 Score=142.73 Aligned_cols=128 Identities=22% Similarity=0.207 Sum_probs=88.1
Q ss_pred CCEEEEecCCCCCcccccccccCC-----CCCcEEEcccCccCCCCCccccccccccccccccccccCC--CCCCC--cc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNL-----TNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP--IPSTV--SH 141 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~ 141 (621)
..++.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4678888888888876 6767666 7888888888888877777788888888888888887654 23333 67
Q ss_pred cccchhhhcccccccC--CCC-CCCCCCCCcceEeccCCCCCCCCCC-cc-----ccceeccCCccc
Q 007025 142 LETLQYLRLNNNSLTG--AIP-PSLSNMSQLAFLDLSYNNLSGPVPS-FH-----AKTFNITGNSLI 199 (621)
Q Consensus 142 l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~l~l~~N~l~~~~p~-~~-----~~~~~l~~N~~~ 199 (621)
+++|++|+|++|+|++ .++ ..+..+++|+.|+|++|+|++.+|. .+ .+.++|++|.+.
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 7777777777777762 111 2334567777777777777775532 11 156777777765
No 351
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.39 E-value=1.1e-12 Score=134.92 Aligned_cols=123 Identities=23% Similarity=0.283 Sum_probs=65.2
Q ss_pred EEEEecCCCCCcccccccccCCCCCcEEEcccCccC--CCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 73 VTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNIS--GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 73 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
++.|++++|.+.+..+..|..+++|+.|+|++|.++ +..|..+..+ +|+.|+|++|+++ .+|..+. ++|++|+|
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEEC
Confidence 444444444554444444556666666666666664 2444444444 4444444444443 2333222 45666666
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLI 199 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~ 199 (621)
++|++++..|..+..+++|+.|+|++|+|++.++..+. +.+++++|.+.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 66666655555666666666666666666665554333 45566666654
No 352
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.38 E-value=2.4e-13 Score=138.31 Aligned_cols=125 Identities=22% Similarity=0.291 Sum_probs=104.3
Q ss_pred CCEEEEecCCCCCccc--cc--ccccCCCCCcEEEcccCccCCCCCc----cccccccccccccccccccCCCCCCCccc
Q 007025 71 GLVTGLGAPSQNLSGT--LS--SSIGNLTNLQLVLLQNNNISGHIPT----EIGKLSKLLTLDLSNNFFTGPIPSTVSHL 142 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~--~~--~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 142 (621)
..++.|+|++|++.+. ++ ..++.+++|++|+|++|+++ .+|. .+.++++|++|+|++|+|++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 5799999999998763 32 33478999999999999997 4444 25788999999999999998889888877
Q ss_pred ---ccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCC-CCCccc--cceeccCCccc
Q 007025 143 ---ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP-VPSFHA--KTFNITGNSLI 199 (621)
Q Consensus 143 ---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~p~~~~--~~~~l~~N~~~ 199 (621)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. .+..+. +.++|++|++.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTS
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCC
Confidence 69999999999999 7788775 8999999999999984 333332 78899999885
No 353
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.38 E-value=2.4e-13 Score=149.72 Aligned_cols=128 Identities=20% Similarity=0.187 Sum_probs=111.7
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccC-CCCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG-PIPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 149 (621)
.+++.|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++ .+|..+.++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 579999999999999999999999999999999999998777779999999999999999996 4678899999999999
Q ss_pred cccccccCCCC-CCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcc
Q 007025 150 LNNNSLTGAIP-PSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSL 198 (621)
Q Consensus 150 l~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~ 198 (621)
|++|++.+.+| ..+..+++|+.|++++|.+++.+|..+. +.+++++|.+
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 99999555665 6899999999999999999988877654 4455666553
No 354
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.38 E-value=1.3e-13 Score=149.33 Aligned_cols=31 Identities=23% Similarity=0.068 Sum_probs=25.7
Q ss_pred hhhHHHHHHHHHhhcccccceeeEEEEecCC
Q 007025 339 GEIQFQTEVEMISLAVHRNLLRLIGFCMTTT 369 (621)
Q Consensus 339 ~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 369 (621)
+..+|..|++++.+++|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 4568999999999999999999999997653
No 355
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=3.8e-13 Score=139.14 Aligned_cols=104 Identities=17% Similarity=0.227 Sum_probs=94.3
Q ss_pred cEEEcccC-ccCCCCCcccccccccccccccc-ccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEecc
Q 007025 98 QLVLLQNN-NISGHIPTEIGKLSKLLTLDLSN-NFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLS 175 (621)
Q Consensus 98 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 175 (621)
..+++++| .|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 5888 99999999999996 99997777899999999999999999999888999999999999999
Q ss_pred CCCCCCCCCCccc----cceeccCCcccccCC
Q 007025 176 YNNLSGPVPSFHA----KTFNITGNSLICATG 203 (621)
Q Consensus 176 ~N~l~~~~p~~~~----~~~~l~~N~~~c~~~ 203 (621)
+|+|++.++..+. +.++|.+|++.|.|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999988776654 688999999999875
No 356
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.36 E-value=4.5e-13 Score=146.51 Aligned_cols=127 Identities=19% Similarity=0.232 Sum_probs=92.6
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccC--CCCCCCcccccchhhh
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTG--PIPSTVSHLETLQYLR 149 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 149 (621)
.++.|++++|++.... .+..+++|++|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 4777888887765432 12577788888888888887777778888888888888888875 4556677788888888
Q ss_pred cccccccCCCCC-CCCCCCCcceEeccCCCCCCCCCCccc---cceeccCCcccc
Q 007025 150 LNNNSLTGAIPP-SLSNMSQLAFLDLSYNNLSGPVPSFHA---KTFNITGNSLIC 200 (621)
Q Consensus 150 l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~l~~~~p~~~~---~~~~l~~N~~~c 200 (621)
|++|++++.+|. .+..+++|+.|++++|++++.+|..+. +.+++++|.+..
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ 435 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKS 435 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCcccc
Confidence 888888764554 367777888888888888776665442 667777777753
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=1.1e-12 Score=132.15 Aligned_cols=122 Identities=29% Similarity=0.384 Sum_probs=92.5
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+.++++|++|+|++|++++ + ..+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 468888888888886554 8888888888888888875 34 48888888888888888884 3 46778888888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc---cccceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~c 200 (621)
++|++++. ..+..+++|+.|++++|+|++..|-. ..+.+++++|.+..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC
Confidence 88888854 56778888888888888888765511 11667888887743
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.34 E-value=1.2e-12 Score=129.89 Aligned_cols=121 Identities=22% Similarity=0.299 Sum_probs=78.7
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+++..+ +..+++|++|+|++|++++ +|.. .. ++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 457777777777775444 7777777777777777764 4432 22 677777777777774 33 4677777777777
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCcc----ccceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~----~~~~~l~~N~~~c~ 201 (621)
++|+|++. | .+..+++|+.|+|++|+|++. +... .+.+++++|++.+.
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 77777743 3 567777777777777777765 2111 15667777776544
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.34 E-value=4.5e-15 Score=140.75 Aligned_cols=125 Identities=21% Similarity=0.300 Sum_probs=101.4
Q ss_pred CEEEEecCCCCCcccccc------cccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccc
Q 007025 72 LVTGLGAPSQNLSGTLSS------SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETL 145 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 145 (621)
.++.++++.+++.|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 566667777777777766 88899999999999999986 77 8889999999999999998 788888888999
Q ss_pred hhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCC-Ccc-----ccceeccCCccccc
Q 007025 146 QYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVP-SFH-----AKTFNITGNSLICA 201 (621)
Q Consensus 146 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p-~~~-----~~~~~l~~N~~~c~ 201 (621)
+.|+|++|+|++ +| .+..+++|+.|++++|+|++..+ ..+ .+.+++++|++.+.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 999999999985 55 58888899999999999986432 111 27788999988665
No 360
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.33 E-value=1.6e-13 Score=123.50 Aligned_cols=104 Identities=24% Similarity=0.255 Sum_probs=93.5
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCC-CCCCCcccccchhhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP-IPSTVSHLETLQYLR 149 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 149 (621)
.+++.|++++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|+|++|++++. .|..+..+++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5799999999999977 7899999999999999999987898888899999999999999963 348899999999999
Q ss_pred cccccccCCCC---CCCCCCCCcceEeccC
Q 007025 150 LNNNSLTGAIP---PSLSNMSQLAFLDLSY 176 (621)
Q Consensus 150 l~~N~l~~~~p---~~~~~l~~L~~l~l~~ 176 (621)
|++|.+++..+ ..+..+++|+.|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999996554 4789999999999874
No 361
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.32 E-value=1.3e-12 Score=132.76 Aligned_cols=123 Identities=25% Similarity=0.348 Sum_probs=95.3
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+++. +.+..+++|++|+|++|.+++ +| .+.++++|+.|+|++|++++. +. +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEc
Confidence 4788899999998864 368889999999999999885 44 388888999999999988854 33 788888888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc---cccceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~c~ 201 (621)
++|++++. +. +..+++|+.|++++|.+++..+-. ..+.+++++|.+...
T Consensus 159 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 159 GNAQVSDL-TP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred cCCcCCCC-hh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 88888854 33 788888888888888888765411 116778888877544
No 362
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.32 E-value=1.4e-12 Score=135.05 Aligned_cols=139 Identities=17% Similarity=0.164 Sum_probs=95.7
Q ss_pred cceeeEEeCC-----------CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCC-ccccccccccc-cccc
Q 007025 61 CSWALVTCSD-----------GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIP-TEIGKLSKLLT-LDLS 127 (621)
Q Consensus 61 c~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls 127 (621)
|.|..|.|+. ..++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+| ..|.++++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 7889999973 246778888888875555677888888888888888766555 35677777664 5666
Q ss_pred cccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccC-CCCCCCCCCccc------cceeccCCccc
Q 007025 128 NNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY-NNLSGPVPSFHA------KTFNITGNSLI 199 (621)
Q Consensus 128 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~-N~l~~~~p~~~~------~~~~l~~N~~~ 199 (621)
+|+++...|..|..+++|++|++++|+|++..+..+....++..|++.+ |+++...+..+. +.++|++|.+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 7778766677778888888888888888755555566666677777754 455544433322 34667777664
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.31 E-value=2.7e-12 Score=127.31 Aligned_cols=122 Identities=25% Similarity=0.337 Sum_probs=102.0
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|+++. ++ .+..+++|++|+|++|.|++. |. +.++++|++|+|++|++++ +|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 478999999999984 55 789999999999999999964 44 9999999999999999995 554333 99999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc---cccceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~c~ 201 (621)
++|+|++ +| .+..+++|+.|+|++|+|++..+-. ..+.+++++|.+...
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch
Confidence 9999995 44 5899999999999999999763211 127889999998654
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.31 E-value=2.3e-12 Score=129.85 Aligned_cols=121 Identities=26% Similarity=0.350 Sum_probs=104.4
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.+++.|+|++|.+++ ++ .+..+++|++|+|++|.+++ + +.+.++++|+.|+|++|++++. ..+..+++|+.|+|
T Consensus 90 ~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 579999999999986 33 49999999999999999996 3 4789999999999999999954 67899999999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCcc----ccceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~----~~~~~l~~N~~~c 200 (621)
++|+|++..| +..+++|+.|+|++|.|++. |... .+.+++++|++.+
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEEC
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccC
Confidence 9999996554 89999999999999999975 3321 1678999998864
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.30 E-value=3.2e-12 Score=129.84 Aligned_cols=121 Identities=24% Similarity=0.387 Sum_probs=85.1
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467778888887775444 7778888888888888774 33 57777888888888888774 443 777788888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc---cccceeccCCccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLI 199 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~ 199 (621)
++|++++..+ +..+++|+.|+|++|.+++..+-. ..+.+++++|.+.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccC
Confidence 8888874433 777778888888888877654411 1156777777664
No 366
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.30 E-value=5.8e-13 Score=123.56 Aligned_cols=106 Identities=21% Similarity=0.244 Sum_probs=94.9
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCC--CCcccccchhh
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS--TVSHLETLQYL 148 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L 148 (621)
..++.|+|++|++++. +.|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 3799999999999976 78999999999999999999655555699999999999999997 6776 88999999999
Q ss_pred hcccccccCCCCCC----CCCCCCcceEeccCCCCC
Q 007025 149 RLNNNSLTGAIPPS----LSNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 149 ~l~~N~l~~~~p~~----~~~l~~L~~l~l~~N~l~ 180 (621)
+|++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999 66774 899999999999999875
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.28 E-value=4.3e-12 Score=140.42 Aligned_cols=122 Identities=30% Similarity=0.382 Sum_probs=88.3
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|.+.+..+ +..|++|+.|+|++|.|++ +| .+.+|++|+.|+|++|+|++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467888888888876555 7788888888888888874 34 67778888888888888874 3 35777788888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc---cccceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF---HAKTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~l~~N~~~c 200 (621)
++|+|++. ..+..+++|+.|+|++|.|++.+|-. ..+.++|++|.+..
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC
Confidence 88888754 56777778888888888887766511 11567777776643
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.27 E-value=3e-12 Score=132.24 Aligned_cols=122 Identities=24% Similarity=0.317 Sum_probs=70.4
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|.+.+..+ +..+++|++|+|++|.+++. |. +..+++|+.|+|++|.+++ + +.+..+++|+.|+|
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 345666666666664433 55666666666666666633 22 6666666666666666663 2 34556666666666
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~~c 200 (621)
++|++++. +.+..+++|+.|++++|.+++..|..+. +.+++++|++..
T Consensus 273 ~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 273 GSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred cCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 66666632 3355666666666666666655544322 455666666543
No 369
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.26 E-value=2.5e-12 Score=131.20 Aligned_cols=106 Identities=19% Similarity=0.217 Sum_probs=50.9
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccc-cccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEI-GKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.++.|++++|.+++..+..++.+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++. |. ...+++|++|+|
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~L 198 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDL 198 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEEC
Confidence 34555555555554444445555555555555555554434333 2445555555555555422 21 223455555555
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 180 (621)
++|+|+ .+|..+..+++|+.|+|++|+|+
T Consensus 199 s~N~l~-~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 199 SSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CSSCCC-EECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCcCC-cchhhhcccCcccEEECcCCccc
Confidence 555555 23333445555555555555555
No 370
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=2.8e-11 Score=119.80 Aligned_cols=145 Identities=12% Similarity=0.059 Sum_probs=113.1
Q ss_pred HHhcCCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-cccceeeEEEEecCCceeEE
Q 007025 296 SATSNFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLV 374 (621)
Q Consensus 296 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv 374 (621)
.....|.....++.|+.+.||+.... ++.+++|+...... .....+.+|+.+++.+. |..+.++++++...+..++|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34456877788888889999998755 68999999864321 22335889999998884 67788999999888899999
Q ss_pred EeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 007025 375 YPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ--------------------------------------- 415 (621)
Q Consensus 375 ~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------------- 415 (621)
|||++|.+|.+.... ......++.+++++|..||+.
T Consensus 89 ~e~i~G~~l~~~~~~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 89 MSEADGVLCSEEYED-----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp EECCSSEEHHHHCCT-----TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EEecCCeehhhccCC-----cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999998876421 123457889999999999981
Q ss_pred -----------------CCCceEEcccccCeEEecCCCceEEeecccce
Q 007025 416 -----------------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447 (621)
Q Consensus 416 -----------------~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~ 447 (621)
.++.++|+|++|.|||++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01469999999999999876666799999875
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.25 E-value=1.9e-12 Score=143.49 Aligned_cols=138 Identities=22% Similarity=0.269 Sum_probs=101.0
Q ss_pred CCCCCCCCCCCCCCcceeeEE--------eCCCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccc
Q 007025 47 HDVLNNWDENSVDPCSWALVT--------CSDGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKL 118 (621)
Q Consensus 47 ~~~~~~W~~~~~~~c~w~gv~--------C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 118 (621)
...+++|... .+||.|.|.. |....++.|++++|+|+ .+|..+. ++|++|+|++|.|+ .+|. .+
T Consensus 9 ~~~w~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 9 DAVWSAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp -CHHHHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 3445667543 4789997643 33456889999999998 7777665 88999999999998 5665 57
Q ss_pred ccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc-cccceeccCCc
Q 007025 119 SKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF-HAKTFNITGNS 197 (621)
Q Consensus 119 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~l~~N~ 197 (621)
++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|++++|+|++.++.. ..+.++|++|.
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQ 152 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCc
Confidence 88999999999998 5776 6788888888888888 4555 4577888888888887643321 12667777777
Q ss_pred ccc
Q 007025 198 LIC 200 (621)
Q Consensus 198 ~~c 200 (621)
+..
T Consensus 153 l~~ 155 (622)
T 3g06_A 153 LAS 155 (622)
T ss_dssp CSC
T ss_pred CCC
Confidence 653
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.25 E-value=6.6e-12 Score=138.05 Aligned_cols=101 Identities=24% Similarity=0.370 Sum_probs=91.5
Q ss_pred CCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEecc
Q 007025 96 NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLS 175 (621)
Q Consensus 96 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 175 (621)
.|+.|+|++|.|++ +|. |++|++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57789999999995 786 999999999999999999 899999999999999999999996 77 89999999999999
Q ss_pred CCCCCCCC-CCccc-----cceeccCCccccc
Q 007025 176 YNNLSGPV-PSFHA-----KTFNITGNSLICA 201 (621)
Q Consensus 176 ~N~l~~~~-p~~~~-----~~~~l~~N~~~c~ 201 (621)
+|+|++.+ |..+. +.++|++|++...
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 99999986 76554 7789999998544
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.25 E-value=8.1e-12 Score=138.24 Aligned_cols=123 Identities=26% Similarity=0.341 Sum_probs=106.0
Q ss_pred CCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhh
Q 007025 70 DGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLR 149 (621)
Q Consensus 70 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (621)
...+..|+|++|.|.+ + +.+..+++|+.|+|++|.|++ + +.+.+|++|+.|+|++|+|++. ..+..|++|+.|+
T Consensus 86 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp CTTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 3579999999999986 3 379999999999999999995 4 4699999999999999999964 6789999999999
Q ss_pred cccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCc----cccceeccCCccccc
Q 007025 150 LNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSF----HAKTFNITGNSLICA 201 (621)
Q Consensus 150 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~----~~~~~~l~~N~~~c~ 201 (621)
|++|+|++..| +..+++|+.|+|++|+|++. |.. ..+.++|++|++...
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 99999997666 89999999999999999975 332 127789999988643
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.23 E-value=1.2e-11 Score=135.36 Aligned_cols=114 Identities=27% Similarity=0.336 Sum_probs=89.8
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|+|++ +|. +.. +|++|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 578888999999887 666 665 89999999999986 676 67899999999999985 776 5788999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc---------cceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA---------KTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~---------~~~~l~~N~~~c~ 201 (621)
++|+|++ +|. |. ++|+.|+|++|+|+. +|.... +.++|++|.+...
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-lp~~~~~L~~~~~~L~~L~Ls~N~l~~l 222 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLES-LPAVPVRNHHSEETEIFFRCRENRITHI 222 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCSS-CCCCC--------CCEEEECCSSCCCCC
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCCc-hhhHHHhhhcccccceEEecCCCcceec
Confidence 9999985 777 65 889999999999884 444211 5578888888643
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.20 E-value=1.5e-11 Score=132.46 Aligned_cols=104 Identities=29% Similarity=0.403 Sum_probs=58.7
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|.+.+..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 356666666666665444 5566666666666666664322 5556666666666666654322 555555666666
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCC
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGP 182 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 182 (621)
++|++++..| +..+++|+.|++++|.+++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 6665554433 44555555555555555543
No 376
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.18 E-value=7.2e-11 Score=116.41 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=101.7
Q ss_pred CCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhccccc--ceeeEEEEecCCceeEEEee
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~ 377 (621)
++.+..+.+.|..+.||++...+|+.+++|+.... ....+..|+.+++.+.+.+ +.+++++....+..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 44443333455669999998777888999987543 2235778999998886544 45688888887888999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 007025 378 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC----------------------------------------- 416 (621)
Q Consensus 378 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------------- 416 (621)
++|.++. ... .+ ...++.++++.|..||+..
T Consensus 97 i~G~~l~--~~~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 97 VPGQDLL--SSH---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp CSSEETT--TSC---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred cCCcccC--cCc---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 9998884 221 22 2367788888888888742
Q ss_pred --------------CCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 417 --------------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 417 --------------~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
++.++|+|++|.|||+++++.+.|+||+.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.17 E-value=5.8e-11 Score=127.37 Aligned_cols=116 Identities=24% Similarity=0.350 Sum_probs=74.3
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.+++.|++++|++++. | .++.+++|++|+|++|.+++ +| ++++++|++|+|++|+|++ +| ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 3567777777777754 3 56777777777777777775 33 6677777777777777774 33 667777777777
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc--cceeccCCc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNS 197 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~ 197 (621)
++|++++ +| +..+++|+.|++++|+|++..-.... +.+++++|.
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~ 159 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNK 159 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCS
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCC
Confidence 7777774 33 66677777777777777663211111 455555553
No 378
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.16 E-value=2.1e-11 Score=125.89 Aligned_cols=120 Identities=19% Similarity=0.367 Sum_probs=87.7
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEEC
Confidence 467788888888775443 7778888888888888875433 7788888888888888884 333 778888888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCcc----ccceeccCCccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH----AKTFNITGNSLI 199 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~----~~~~~l~~N~~~ 199 (621)
++|.+++ + +.+..+++|+.|++++|.+++. +... .+.+++++|.+.
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCC
Confidence 8888874 3 4577788888888888888764 3211 167788888764
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.15 E-value=4e-11 Score=129.11 Aligned_cols=123 Identities=30% Similarity=0.412 Sum_probs=98.0
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|.+.+. +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 4688899999988864 467888999999999999986544 8888999999999999985433 788899999999
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCcc---ccceeccCCccccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH---AKTFNITGNSLICA 201 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~---~~~~~l~~N~~~c~ 201 (621)
++|++++..| +..+++|+.|+|++|++++..|... .+.+++++|.+...
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 9999986544 7888999999999999988776221 16778888887644
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.15 E-value=1.1e-10 Score=125.19 Aligned_cols=115 Identities=24% Similarity=0.331 Sum_probs=66.6
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.|++++|.+++ +| .|+++++|++|+|++|++++ +|..+ .+|++|+|++|++++ +| .+.++++|+.|+++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 55666666666664 44 46666666666666666663 44332 356666666666664 44 46666666666666
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc----cceeccCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSLI 199 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~l~~N~~~ 199 (621)
+|++++ +|... ++|+.|++++|.++ .+|.... +.+++++|.+.
T Consensus 204 ~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 204 NNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp SSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCS
T ss_pred CCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCC
Confidence 666663 33322 35666666666665 3443211 56677777664
No 381
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.14 E-value=1e-10 Score=125.49 Aligned_cols=119 Identities=27% Similarity=0.250 Sum_probs=88.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|++++|++++. + ++.+++|++|+|++|...+.+ .+..+++|+.|+|++|++++ +| +..+++|+.|++
T Consensus 127 ~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l 198 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNC 198 (457)
T ss_dssp TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEEC
T ss_pred CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEEC
Confidence 4688899999998874 3 778888888888888665565 37788888888888888885 55 777888888888
Q ss_pred ccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCcc--ccceeccCCcccc
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFH--AKTFNITGNSLIC 200 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~--~~~~~l~~N~~~c 200 (621)
++|++++. .+..+++|+.|++++|+|++.+...+ .+.+++++|.+..
T Consensus 199 ~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 199 DTNNITKL---DLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSSCCSCC---CCTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC
T ss_pred cCCcCCee---ccccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCCC
Confidence 88888854 37778888888888888887321111 1667788887754
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.13 E-value=2.1e-13 Score=129.15 Aligned_cols=110 Identities=24% Similarity=0.247 Sum_probs=98.1
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 579999999999997 66 8999999999999999999 788888889999999999999995 66 6889999999999
Q ss_pred ccccccCCCC-CCCCCCCCcceEeccCCCCCCCCCC
Q 007025 151 NNNSLTGAIP-PSLSNMSQLAFLDLSYNNLSGPVPS 185 (621)
Q Consensus 151 ~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~p~ 185 (621)
++|+|++..+ ..+..+++|++|++++|++++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999994322 4788999999999999999887664
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.12 E-value=1.4e-10 Score=124.23 Aligned_cols=96 Identities=25% Similarity=0.399 Sum_probs=60.0
Q ss_pred CCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCcceEec
Q 007025 95 TNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDL 174 (621)
Q Consensus 95 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 174 (621)
++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ ++|++|+|++|++++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 466666666666664 55 46666777777777776663 55433 366666777777764 45 4667777777777
Q ss_pred cCCCCCCCCCCcc--ccceeccCCccc
Q 007025 175 SYNNLSGPVPSFH--AKTFNITGNSLI 199 (621)
Q Consensus 175 ~~N~l~~~~p~~~--~~~~~l~~N~~~ 199 (621)
++|.+++ +|... .+.+++++|.+.
T Consensus 203 ~~N~l~~-l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 203 DNNSLKK-LPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp CSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCcCcccEEECcCCcCC
Confidence 7777765 23222 256667777664
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.09 E-value=1.2e-12 Score=134.52 Aligned_cols=136 Identities=19% Similarity=0.204 Sum_probs=104.0
Q ss_pred CCcceeeEEeCCCCEEEEecCCCCCcccccccccCC--CCCcEEEcccCccCCCCCccccccccccccccccccccCC-C
Q 007025 59 DPCSWALVTCSDGLVTGLGAPSQNLSGTLSSSIGNL--TNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGP-I 135 (621)
Q Consensus 59 ~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~ 135 (621)
-|..|.++.|+...++.|+++++++. +..+..+ ++|+.|++++|.+.+..+. +.++++|++|+|++|.+++. +
T Consensus 35 vc~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 35 VCKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp SCHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHH
Confidence 45579888887767888888888776 4556666 7888888888888866554 56788888888888888755 7
Q ss_pred CCCCcccccchhhhcccccccCCCCCCCCCCCCcceEeccCC-CCCCC-CCCcc-----ccceeccCC-cc
Q 007025 136 PSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYN-NLSGP-VPSFH-----AKTFNITGN-SL 198 (621)
Q Consensus 136 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N-~l~~~-~p~~~-----~~~~~l~~N-~~ 198 (621)
|..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. ++..+ .+.+++++| .+
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 777888888888888888888777777888888888888888 67652 33322 267777777 44
No 385
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.09 E-value=6.2e-10 Score=115.47 Aligned_cols=142 Identities=13% Similarity=0.179 Sum_probs=106.6
Q ss_pred CCeeeeccccEEEEEEEcCCcEEEEEEec--cCcccchhhHHHHHHHHHhhcc--cccceeeEEEEecC---CceeEEEe
Q 007025 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLK--DGNAIGGEIQFQTEVEMISLAV--HRNLLRLIGFCMTT---TERLLVYP 376 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~e 376 (621)
.+.|+.|.++.||+....+ ..+++|+.. ..........+.+|+.+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678999999999988764 678888775 3322223346788999999886 45578889888766 45899999
Q ss_pred eccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 007025 377 YMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC---------------------------------------- 416 (621)
Q Consensus 377 ~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------------- 416 (621)
|++|..+.+... ..++...+..++.++++.|..||+..
T Consensus 122 ~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 122 FVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp CCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred ecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 999987754222 34778889999999999999999730
Q ss_pred ---------------CCceEEcccccCeEEecCCCc--eEEeeccccee
Q 007025 417 ---------------DPKIIHRDVKAANILLDEYYE--AVVGDFGLAKL 448 (621)
Q Consensus 417 ---------------~~~ivH~Dlkp~NILl~~~~~--~kl~Dfgla~~ 448 (621)
.+.++|||+++.|||++.++. +.|.||+.+..
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999998864
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.05 E-value=1.2e-11 Score=128.69 Aligned_cols=110 Identities=21% Similarity=0.248 Sum_probs=64.2
Q ss_pred CEEEEecCCCCCccccc----ccccCCC-CCcEEEcccCccCCCCCcccccc-----ccccccccccccccCCCCCCCcc
Q 007025 72 LVTGLGAPSQNLSGTLS----SSIGNLT-NLQLVLLQNNNISGHIPTEIGKL-----SKLLTLDLSNNFFTGPIPSTVSH 141 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~ 141 (621)
.++.|+|++|++++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46666666666665554 5555666 66666666666665555555554 66666666666666554443333
Q ss_pred c-----ccchhhhcccccccCCCCCCCC----C-CCCcceEeccCCCCCC
Q 007025 142 L-----ETLQYLRLNNNSLTGAIPPSLS----N-MSQLAFLDLSYNNLSG 181 (621)
Q Consensus 142 l-----~~L~~L~l~~N~l~~~~p~~~~----~-l~~L~~l~l~~N~l~~ 181 (621)
. ++|++|+|++|+|++..+..+. . .++|++|+|++|.|++
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 2 5666666666666644333322 2 2466666666666664
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.04 E-value=3.2e-10 Score=125.65 Aligned_cols=52 Identities=27% Similarity=0.265 Sum_probs=27.3
Q ss_pred ccchhhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc--cceeccCCccc
Q 007025 143 ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA--KTFNITGNSLI 199 (621)
Q Consensus 143 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~l~~N~~~ 199 (621)
++|+.|+|++|+|++ +| ..+++|+.|+|++|.|++.++ ... +.++|++|.+.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~-~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM-LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC-CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc-ccccCcEEeCCCCCCC
Confidence 455666666666663 44 234556666666666654322 211 45556666554
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.04 E-value=1.3e-10 Score=120.22 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=96.0
Q ss_pred EeCCCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCC-CCcccccc
Q 007025 67 TCSDGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPS-TVSHLETL 145 (621)
Q Consensus 67 ~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L 145 (621)
+|+.. .++.++++|+ .+|..+ .++|++|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.++++|
T Consensus 8 ~C~~~---~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l 81 (350)
T 4ay9_X 8 HCSNR---VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKL 81 (350)
T ss_dssp EEETT---EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTC
T ss_pred EeeCC---EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhh
Confidence 46543 4677889998 677766 37899999999999965556799999999999999999766664 67889887
Q ss_pred hh-hhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc
Q 007025 146 QY-LRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA 188 (621)
Q Consensus 146 ~~-L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 188 (621)
+. +.+++|+|++..|..|..+++|++|++++|.|++.++..+.
T Consensus 82 ~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~ 125 (350)
T 4ay9_X 82 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 125 (350)
T ss_dssp CEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTC
T ss_pred hhhhcccCCcccccCchhhhhccccccccccccccccCCchhhc
Confidence 75 67778999977788999999999999999999987765544
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.04 E-value=3.3e-12 Score=134.08 Aligned_cols=130 Identities=19% Similarity=0.227 Sum_probs=84.1
Q ss_pred CCEEEEecCCCCCcc----cccccccCC---------CCCcEEEcccCccC-CCCC---cccccccccccccccccccc-
Q 007025 71 GLVTGLGAPSQNLSG----TLSSSIGNL---------TNLQLVLLQNNNIS-GHIP---TEIGKLSKLLTLDLSNNFFT- 132 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~----~~~~~~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~- 132 (621)
.+++.|+|++|++.+ .++..+..+ ++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 467777777777752 344555555 77777777777776 3344 35556777777777777776
Q ss_pred -C---CCCCCCcccccchhhhccccccc----CCCCCCCCCCCCcceEeccCCCCCCC----CCCc-------cccceec
Q 007025 133 -G---PIPSTVSHLETLQYLRLNNNSLT----GAIPPSLSNMSQLAFLDLSYNNLSGP----VPSF-------HAKTFNI 193 (621)
Q Consensus 133 -~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~l~l~~N~l~~~----~p~~-------~~~~~~l 193 (621)
| .+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++. ++.. ..+.++|
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEEC
Confidence 2 34446667777777777777774 45666677777777777777777654 2221 1256677
Q ss_pred cCCcccc
Q 007025 194 TGNSLIC 200 (621)
Q Consensus 194 ~~N~~~c 200 (621)
++|.+..
T Consensus 282 ~~n~i~~ 288 (386)
T 2ca6_A 282 QYNEIEL 288 (386)
T ss_dssp CSSCCBH
T ss_pred cCCcCCH
Confidence 7776643
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.02 E-value=1e-11 Score=129.13 Aligned_cols=112 Identities=24% Similarity=0.216 Sum_probs=50.5
Q ss_pred CEEEEecCCCCCcccccccccCC-----CCCcEEEcccCccCCCCCcccccc-----ccccccccccccccCCCCCCCcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNL-----TNLQLVLLQNNNISGHIPTEIGKL-----SKLLTLDLSNNFFTGPIPSTVSH 141 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~ 141 (621)
+++.|+|++|++.+..+..+..+ ++|++|+|++|.+++..+..+... ++|+.|+|++|+|++..+..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 45555555555554444444433 555555555555554433332222 45555555555555333322221
Q ss_pred -----cccchhhhcccccccCCC----CCCCCCCC-CcceEeccCCCCCCCC
Q 007025 142 -----LETLQYLRLNNNSLTGAI----PPSLSNMS-QLAFLDLSYNNLSGPV 183 (621)
Q Consensus 142 -----l~~L~~L~l~~N~l~~~~----p~~~~~l~-~L~~l~l~~N~l~~~~ 183 (621)
.++|++|+|++|+|++.. +..+..++ +|+.|+|++|+|++..
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 135555555555554321 11222232 4555555555554433
No 391
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.01 E-value=5.5e-12 Score=129.59 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=97.6
Q ss_pred CCEEEEecCCCCCccc-ccccccCCCCCcEEEcccCccCCCCCccccccccccccccccc-cccCC-CCCCCcccccchh
Q 007025 71 GLVTGLGAPSQNLSGT-LSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNN-FFTGP-IPSTVSHLETLQY 147 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~ 147 (621)
.+++.|+|++|.+.+. ++..+..+++|++|+|++|.+++..|..++++++|++|+|++| .+++. +|..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 4788888988888766 7778888888999999888888777778888888888888888 67752 5666778888888
Q ss_pred hhcccc-cccCC-CCCCCCCCC-CcceEeccCC--CCC-CCCCCcc-----ccceeccCCcc
Q 007025 148 LRLNNN-SLTGA-IPPSLSNMS-QLAFLDLSYN--NLS-GPVPSFH-----AKTFNITGNSL 198 (621)
Q Consensus 148 L~l~~N-~l~~~-~p~~~~~l~-~L~~l~l~~N--~l~-~~~p~~~-----~~~~~l~~N~~ 198 (621)
|+|++| .+++. ++..+..++ +|++|++++| .++ +.+|..+ .+.+++++|.+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 888888 88753 566677788 8888888888 454 2333322 26778888773
No 392
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.00 E-value=4.5e-12 Score=133.04 Aligned_cols=110 Identities=19% Similarity=0.285 Sum_probs=57.3
Q ss_pred CCEEEEecCCCCCcc----cccccccCCCCCcEEEcccCccCCCCCcccc----cc---------cccccccccccccc-
Q 007025 71 GLVTGLGAPSQNLSG----TLSSSIGNLTNLQLVLLQNNNISGHIPTEIG----KL---------SKLLTLDLSNNFFT- 132 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~- 132 (621)
.+++.|+|++|.+.+ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 345555566555554 3455555555666666666555432222222 22 55666666666554
Q ss_pred CCCC---CCCcccccchhhhccccccc--C---CCCCCCCCCCCcceEeccCCCCC
Q 007025 133 GPIP---STVSHLETLQYLRLNNNSLT--G---AIPPSLSNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 133 ~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~l~l~~N~l~ 180 (621)
+.+| ..+..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 2233 23445556666666666555 2 23335555566666666666653
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.99 E-value=5.2e-10 Score=113.19 Aligned_cols=187 Identities=19% Similarity=0.181 Sum_probs=123.5
Q ss_pred CCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-ccc--ceeeEEEEecCC---ceeEEEee
Q 007025 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRN--LLRLIGFCMTTT---ERLLVYPY 377 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e~ 377 (621)
.+.++.|....||+.. ..+++|+.... .....+.+|.+++..+. +.. +.+++....... ..++|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4668999999999863 56888886432 23456889999998873 333 334555443332 34789999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 007025 378 MSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ------------------------------------------ 415 (621)
Q Consensus 378 ~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------ 415 (621)
++|.++..... ..++..++..++.++++.+..||+.
T Consensus 98 i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 98 IKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred cCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99988865433 2467788888999999999999861
Q ss_pred -------------CCCceEEcccccCeEEecC--CCceEEeecccceecCCCCCceee-------------ccccccccc
Q 007025 416 -------------CDPKIIHRDVKAANILLDE--YYEAVVGDFGLAKLLDHCDSHVTT-------------AVRGTVGHI 467 (621)
Q Consensus 416 -------------~~~~ivH~Dlkp~NILl~~--~~~~kl~Dfgla~~~~~~~~~~~~-------------~~~gt~~y~ 467 (621)
..+.++|+|++|.||++++ ...+.|+||+.+...+........ .....+++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1246899999999999998 556789999998754321000000 000111122
Q ss_pred c-hhhhccCCCCCccchHhHHHHHHHHHhCCCCcc
Q 007025 468 A-PEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501 (621)
Q Consensus 468 a-PE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~ 501 (621)
. |+..... ....+.|++|.++|.+.+|..++.
T Consensus 256 ~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 2 2322111 123589999999999999977664
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.77 E-value=4.5e-11 Score=128.36 Aligned_cols=129 Identities=16% Similarity=0.108 Sum_probs=82.3
Q ss_pred CCEEEEecCCCCCcccc-----cccccCCCCCcEEEcccCccCCC----CCccccccccccccccccccccCCCCCCCcc
Q 007025 71 GLVTGLGAPSQNLSGTL-----SSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGPIPSTVSH 141 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 141 (621)
..++.|+|++|.+...- +..+..+++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 46778888888776532 22233577888888888877743 5666667778888888888776433333322
Q ss_pred -----cccchhhhcccccccCC----CCCCCCCCCCcceEeccCCCCCCCCCC----------ccccceeccCCccc
Q 007025 142 -----LETLQYLRLNNNSLTGA----IPPSLSNMSQLAFLDLSYNNLSGPVPS----------FHAKTFNITGNSLI 199 (621)
Q Consensus 142 -----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~p~----------~~~~~~~l~~N~~~ 199 (621)
.++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+. ...+.+++++|.+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 25777777777777644 345556667777777777777653221 12356677777664
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.70 E-value=1.1e-10 Score=114.69 Aligned_cols=67 Identities=30% Similarity=0.378 Sum_probs=51.7
Q ss_pred cccccccccccccccccC--CCCCCCcccccchhhhcccccccCCCCCCCCCCC--CcceEeccCCCCCCCCC
Q 007025 116 GKLSKLLTLDLSNNFFTG--PIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMS--QLAFLDLSYNNLSGPVP 184 (621)
Q Consensus 116 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~l~l~~N~l~~~~p 184 (621)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 467888889999998886 4556677888888889988888854 3344444 88888888888887666
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.60 E-value=3.5e-10 Score=117.66 Aligned_cols=129 Identities=18% Similarity=0.168 Sum_probs=85.0
Q ss_pred CCEEEEecCCCCCcccccccc-cCCCCCcEEEcccCccCCCCCccc-----cccccccccccccccccC----CCCCCCc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSI-GNLTNLQLVLLQNNNISGHIPTEI-----GKLSKLLTLDLSNNFFTG----PIPSTVS 140 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~ 140 (621)
..++.|+|++|+++..-...+ ..+++|+.|+|++|.|+..-...+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 478888888888765433222 345678888888888864322233 235778888888888863 2334446
Q ss_pred ccccchhhhcccccccCC----CCCCCCCCCCcceEeccCCCCCCCCC----C-----ccccceeccCCccc
Q 007025 141 HLETLQYLRLNNNSLTGA----IPPSLSNMSQLAFLDLSYNNLSGPVP----S-----FHAKTFNITGNSLI 199 (621)
Q Consensus 141 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~p----~-----~~~~~~~l~~N~~~ 199 (621)
.+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|++... . ...+.++|++|.+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 677888888888888732 24456667788888888888874221 1 12367888888763
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.58 E-value=3.2e-09 Score=104.18 Aligned_cols=80 Identities=25% Similarity=0.326 Sum_probs=67.2
Q ss_pred cCCCCCcEEEcccCccCC--CCCccccccccccccccccccccCCCCCCCcccc--cchhhhcccccccCCCCC------
Q 007025 92 GNLTNLQLVLLQNNNISG--HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLE--TLQYLRLNNNSLTGAIPP------ 161 (621)
Q Consensus 92 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 161 (621)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999997 4567778999999999999999964 4455555 999999999999987763
Q ss_pred -CCCCCCCcceEe
Q 007025 162 -SLSNMSQLAFLD 173 (621)
Q Consensus 162 -~~~~l~~L~~l~ 173 (621)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367789998876
No 398
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.57 E-value=8.5e-10 Score=118.34 Aligned_cols=129 Identities=19% Similarity=0.155 Sum_probs=102.5
Q ss_pred CCEEEEecCCCCCccc----ccccccCCCCCcEEEcccCccCCCCCccccc-----cccccccccccccccCC----CCC
Q 007025 71 GLVTGLGAPSQNLSGT----LSSSIGNLTNLQLVLLQNNNISGHIPTEIGK-----LSKLLTLDLSNNFFTGP----IPS 137 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~ 137 (621)
..++.|++++|+++.. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5899999999999875 6778888999999999999997544444443 36999999999999865 466
Q ss_pred CCcccccchhhhcccccccCCCCCCCCC-----CCCcceEeccCCCCCC----CCCCcc-----ccceeccCCccc
Q 007025 138 TVSHLETLQYLRLNNNSLTGAIPPSLSN-----MSQLAFLDLSYNNLSG----PVPSFH-----AKTFNITGNSLI 199 (621)
Q Consensus 138 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~----~~p~~~-----~~~~~l~~N~~~ 199 (621)
.+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++ .+|..+ .+.+++++|++.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 6778899999999999998654444432 6799999999999985 555432 278899999874
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=4.6e-07 Score=92.10 Aligned_cols=137 Identities=18% Similarity=0.199 Sum_probs=101.7
Q ss_pred CCCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhccc----ccceeeEEEEecCCceeEEE
Q 007025 300 NFSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH----RNLLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 300 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lv~ 375 (621)
.+...+.++.|....||+. +..+++|+..... ....+.+|..++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4555678999999999997 6678888764321 23457889998888865 223455554 5778999
Q ss_pred eeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 007025 376 PYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQC--------------------------------------- 416 (621)
Q Consensus 376 e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--------------------------------------- 416 (621)
||++|.++..... ..++..++..++.++++.+..||+..
T Consensus 107 e~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 107 KYIKGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp ECCCCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred eecCCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988864332 24677777888888888888888532
Q ss_pred ---------------------CCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 417 ---------------------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 417 ---------------------~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
.+.++|+|++|.|||++.+..+.|+||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 134599999999999998766799999998653
No 400
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=1e-06 Score=87.92 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=59.5
Q ss_pred CCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccc---cceeeEEEEecCCceeEEEeeccC
Q 007025 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCMTTTERLLVYPYMSN 380 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~~~ 380 (621)
.+.|+.|.++.||++...+|+.++||+..... ......|..|++.++.+++. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 46789999999999998889999999865332 22235688999999999765 477777763 47999999998
Q ss_pred CCh
Q 007025 381 GSV 383 (621)
Q Consensus 381 g~L 383 (621)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.49 E-value=3.7e-09 Score=109.95 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=88.5
Q ss_pred CEEEEecCCCCCcccccccc-----cCCCCCcEEEcccCccCC----CCCccccccccccccccccccccCC----CCCC
Q 007025 72 LVTGLGAPSQNLSGTLSSSI-----GNLTNLQLVLLQNNNISG----HIPTEIGKLSKLLTLDLSNNFFTGP----IPST 138 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 138 (621)
+++.|+|++|+++..-...+ ...++|++|+|++|.|+. .++..+..+++|++|+|++|.|++. ++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 68999999999986544444 356899999999999974 2444557789999999999999842 3456
Q ss_pred CcccccchhhhcccccccCC----CCCCCCCCCCcceEeccCCCCCCCC
Q 007025 139 VSHLETLQYLRLNNNSLTGA----IPPSLSNMSQLAFLDLSYNNLSGPV 183 (621)
Q Consensus 139 ~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~ 183 (621)
+..+++|+.|+|++|.|+.. ++..+...++|++|+|++|.|++..
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 67788999999999999842 3344556789999999999998543
No 402
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=1.7e-07 Score=95.72 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=58.4
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccc-ccccccccccCCCCCCCcccccchhhhc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLL-TLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
.++.|+|++|+++.+.+..|.++++|+.|+|.+| ++..-+..|.++++|+ .|+|++ .++..-+..|.+|++|+.|+|
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 5566666666666555555666666666666665 5444445566666666 666665 454334455666666666666
Q ss_pred ccccccCCCCCCCCCCCCcceEe
Q 007025 151 NNNSLTGAIPPSLSNMSQLAFLD 173 (621)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~~l~ 173 (621)
++|+++..-+..|.++++|+.|+
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCccCccchhhhcCCcchhhhc
Confidence 66666644445566666666554
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=2.4e-07 Score=94.55 Aligned_cols=45 Identities=7% Similarity=0.193 Sum_probs=33.8
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIG 116 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 116 (621)
..++.|+|++ +++.+-+..|.++++|+.|+|++|.+....+..|.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~ 145 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALA 145 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSC
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhc
Confidence 3788899998 88877778899999999999999987533333333
No 404
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=3.6e-06 Score=84.90 Aligned_cols=136 Identities=18% Similarity=0.174 Sum_probs=95.1
Q ss_pred CCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccc---cceeeEEEEe-cCCceeEEEeecc
Q 007025 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCM-TTTERLLVYPYMS 379 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~ 379 (621)
.+.++.|....||+. +..+++|+-.. ......+..|.+++..+.+. .+.+++.+.. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 356788888899987 56788887532 12345688999999988653 2556666664 4456789999999
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhc--------------------------------------------
Q 007025 380 NGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQ-------------------------------------------- 415 (621)
Q Consensus 380 ~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------------------- 415 (621)
|..+..... ..++...+..++.++++.|..||+.
T Consensus 97 G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 97 GQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp SEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred CeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 988765321 1245555666666666666666642
Q ss_pred -------------CCCceEEcccccCeEEecC---CCc-eEEeeccccee
Q 007025 416 -------------CDPKIIHRDVKAANILLDE---YYE-AVVGDFGLAKL 448 (621)
Q Consensus 416 -------------~~~~ivH~Dlkp~NILl~~---~~~-~kl~Dfgla~~ 448 (621)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 455 48999998864
No 405
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.29 E-value=2.6e-06 Score=87.79 Aligned_cols=144 Identities=12% Similarity=0.136 Sum_probs=89.8
Q ss_pred Cee-eeccccEEEEEEEc-------CCcEEEEEEeccCcc--cchhhHHHHHHHHHhhccc---ccceeeEEEEecC---
Q 007025 305 NLV-GKGGFGNVYKGYLQ-------DGTVVAVKRLKDGNA--IGGEIQFQTEVEMISLAVH---RNLLRLIGFCMTT--- 368 (621)
Q Consensus 305 ~~i-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~--- 368 (621)
+.| +.|....+|+.... +++.+++|+...... ......+.+|+.++..+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 556 77888999988754 266788887654320 1012357788888887753 2466788887655
Q ss_pred CceeEEEeeccCCChhhhhcc------CCCCCHHHHHHHHHHHHHHH---------------------------------
Q 007025 369 TERLLVYPYMSNGSVASRLKA------KPSLDWATRKRIALGAARGL--------------------------------- 409 (621)
Q Consensus 369 ~~~~lv~e~~~~g~L~~~l~~------~~~l~~~~~~~i~~~ia~~L--------------------------------- 409 (621)
+..++||||++|..+.+.+.. ...++..++..++.++++.|
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWV 185 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHH
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHH
Confidence 356899999998776542100 00122222222222333222
Q ss_pred ---------------------HHHhhc-------CCCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 410 ---------------------LYLHEQ-------CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 410 ---------------------~~LH~~-------~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
.+|.+. ..+.++|+|+.+.|||++++..+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 186 RSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 333221 145799999999999999655578999998864
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.22 E-value=2.9e-08 Score=92.44 Aligned_cols=111 Identities=14% Similarity=0.203 Sum_probs=74.2
Q ss_pred CCCEEEEecCCC-CCccc----ccccccCCCCCcEEEcccCccCCC----CCccccccccccccccccccccCC----CC
Q 007025 70 DGLVTGLGAPSQ-NLSGT----LSSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IP 136 (621)
Q Consensus 70 ~~~v~~l~l~~~-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 136 (621)
...++.|+|++| ++... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 356888888888 77632 445566678888888888887631 233344557788888888887732 34
Q ss_pred CCCcccccchhhhc--ccccccCC----CCCCCCCCCCcceEeccCCCCC
Q 007025 137 STVSHLETLQYLRL--NNNSLTGA----IPPSLSNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 137 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~ 180 (621)
..+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 45666677888888 77877632 2234445577888888887764
No 407
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.20 E-value=7.4e-06 Score=84.57 Aligned_cols=140 Identities=11% Similarity=0.075 Sum_probs=88.9
Q ss_pred cCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhccccc--ceeeEEEEecC-CceeEEEeecc
Q 007025 303 SKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGFCMTT-TERLLVYPYMS 379 (621)
Q Consensus 303 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~~ 379 (621)
..+.++.|....+|+... ++..+++|+.... ..+..|..++..+.... +.++++++... +..++||||++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 346688999999999876 4788999987432 24778888888886433 45677776654 56899999999
Q ss_pred CCChhhh------------------hccCC-----C------------CCHHHH---------------------HHHHH
Q 007025 380 NGSVASR------------------LKAKP-----S------------LDWATR---------------------KRIAL 403 (621)
Q Consensus 380 ~g~L~~~------------------l~~~~-----~------------l~~~~~---------------------~~i~~ 403 (621)
+.++.+. ++... . -.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8665421 01000 0 001111 01111
Q ss_pred HHHHHHHHHhhc-CCCceEEcccccCeEEecCCCceEEeecccceec
Q 007025 404 GAARGLLYLHEQ-CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLL 449 (621)
Q Consensus 404 ~ia~~L~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~ 449 (621)
.+...+.++... .++.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222233211 1257899999999999988777889999988753
No 408
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.19 E-value=9.1e-06 Score=80.13 Aligned_cols=135 Identities=19% Similarity=0.141 Sum_probs=96.0
Q ss_pred eeeecccc-EEEEEEEc-CCcEEEEEEeccCcccchhhHHHHHHHHHhhcc-cccceeeEEEEecCCceeEEEeeccCCC
Q 007025 306 LVGKGGFG-NVYKGYLQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV-HRNLLRLIGFCMTTTERLLVYPYMSNGS 382 (621)
Q Consensus 306 ~iG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g~ 382 (621)
.+..|..| .||+.... ++..+++|+-... ....+..|...++.+. +--+.++++++.+.+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556665 68987765 4667899976432 2346778998888774 3336678888888899999999999988
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------------
Q 007025 383 VASRLKAKPSLDWATRKRIALGAARGLLYLHEQC---------------------------------------------- 416 (621)
Q Consensus 383 L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------------------- 416 (621)
+.+..... ......+..++++.|..||+..
T Consensus 107 ~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 107 AFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred ccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 76654321 1223455666666666676420
Q ss_pred ---------CCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 417 ---------DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 417 ---------~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
.+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999877777999998864
No 409
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.05 E-value=4.8e-07 Score=100.05 Aligned_cols=103 Identities=10% Similarity=0.090 Sum_probs=61.0
Q ss_pred EEEEecCCCCC-cc-cccccccCCCCCcEEEcccCccCCC----CCccccccccccccccccccccC----CCCCCCccc
Q 007025 73 VTGLGAPSQNL-SG-TLSSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFTG----PIPSTVSHL 142 (621)
Q Consensus 73 v~~l~l~~~~l-~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l 142 (621)
++.|+|+++.- .. .++....++++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++ .++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 77777776651 10 1222234667777777777776654 33334566777777777777762 223334556
Q ss_pred ccchhhhcccccccCCCCCCCCCCCCcceEeccC
Q 007025 143 ETLQYLRLNNNSLTGAIPPSLSNMSQLAFLDLSY 176 (621)
Q Consensus 143 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 176 (621)
++|+.|+|++|.+.+ +|..+..+++|+.|++++
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 777777777777663 455556666666666654
No 410
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.97 E-value=3.9e-05 Score=80.25 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=49.4
Q ss_pred CCeeeeccccEEEEEEEc-CCcEEEEEEeccCcc------cchhhHHHHHHHHHhhccc--cc-ceeeEEEEecCCceeE
Q 007025 304 KNLVGKGGFGNVYKGYLQ-DGTVVAVKRLKDGNA------IGGEIQFQTEVEMISLAVH--RN-LLRLIGFCMTTTERLL 373 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~H--~n-iv~l~~~~~~~~~~~l 373 (621)
.+.||.|.++.||++... +++.++||....... .....++..|.+++..+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999754 467899998653221 1123356778888887642 33 4455554 3455789
Q ss_pred EEeeccCC
Q 007025 374 VYPYMSNG 381 (621)
Q Consensus 374 v~e~~~~g 381 (621)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.96 E-value=1.2e-07 Score=88.29 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=84.3
Q ss_pred ccccccccCCCCCcEEEcccC-ccCCC----CCccccccccccccccccccccCC----CCCCCcccccchhhhcccccc
Q 007025 85 GTLSSSIGNLTNLQLVLLQNN-NISGH----IPTEIGKLSKLLTLDLSNNFFTGP----IPSTVSHLETLQYLRLNNNSL 155 (621)
Q Consensus 85 ~~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l 155 (621)
..+...+...+.|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 345556788899999999999 88632 344566778999999999999732 233455568899999999999
Q ss_pred cCC----CCCCCCCCCCcceEec--cCCCCCCCCCCc---------cccceeccCCcc
Q 007025 156 TGA----IPPSLSNMSQLAFLDL--SYNNLSGPVPSF---------HAKTFNITGNSL 198 (621)
Q Consensus 156 ~~~----~p~~~~~l~~L~~l~l--~~N~l~~~~p~~---------~~~~~~l~~N~~ 198 (621)
+.. +...+...++|++|+| ++|.|+...... ..+.++|++|.+
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 843 4556777889999999 889998532111 226677877765
No 412
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.87 E-value=3.9e-05 Score=80.94 Aligned_cols=77 Identities=13% Similarity=0.013 Sum_probs=48.2
Q ss_pred CCceEEcccccCeEEecCCCceEEeecccceecCCCCCceeeccc--ccccccchhhhccCC---CCCccchHhHHHHHH
Q 007025 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTAVR--GTVGHIAPEYLSTGQ---SSEKTDVFGFGILLL 491 (621)
Q Consensus 417 ~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~---~~~~sDvwS~Gvil~ 491 (621)
.+.++|||+++.|||++.++ ++|+||+.+..-... ..-.... -...|++|+...... .....++.+....+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~--~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG--FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH--HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH--HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 45899999999999999876 999999988753211 0000000 123466766653211 112345567788888
Q ss_pred HHHhC
Q 007025 492 ELISG 496 (621)
Q Consensus 492 elltg 496 (621)
+.+++
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 413
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.87 E-value=3.5e-06 Score=93.04 Aligned_cols=126 Identities=13% Similarity=0.084 Sum_probs=93.2
Q ss_pred CCEEEEecCCCCCccc----ccccccCCCCCcEEEcccCccCC----CCCccccccccccccccccccccCCCCCCCccc
Q 007025 71 GLVTGLGAPSQNLSGT----LSSSIGNLTNLQLVLLQNNNISG----HIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHL 142 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 142 (621)
..++.|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|+.|+|++|.+.+ +|..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 4789999999988765 55556788999999999999973 344455678999999999999984 77788888
Q ss_pred ccchhhhccccccc---CCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCCcc
Q 007025 143 ETLQYLRLNNNSLT---GAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGNSL 198 (621)
Q Consensus 143 ~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N~~ 198 (621)
++|+.|+++++... +..+..+..+++|+.|+++++... .+|..+. +.++|++|.+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l 305 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALL 305 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcC
Confidence 99999998864332 334456777788888888875433 3444332 6677777764
No 414
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.84 E-value=6.7e-05 Score=76.44 Aligned_cols=137 Identities=17% Similarity=0.226 Sum_probs=78.6
Q ss_pred CeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhccc--ccceeeEE------EEecCCceeEEEe
Q 007025 305 NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH--RNLLRLIG------FCMTTTERLLVYP 376 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~------~~~~~~~~~lv~e 376 (621)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+.. -.+.+++. +....+..+++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3455677889999987655 5889988642 1233445555554431 12333332 1123566789999
Q ss_pred eccCCChh--------------hhhc---c-C--C--------CCCHHHH------------------------------
Q 007025 377 YMSNGSVA--------------SRLK---A-K--P--------SLDWATR------------------------------ 398 (621)
Q Consensus 377 ~~~~g~L~--------------~~l~---~-~--~--------~l~~~~~------------------------------ 398 (621)
|++|..+. ..++ . . + .-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0111 0 0 0 0122211
Q ss_pred -HHHHHHHHHHHHHHhh----------cCCCceEEcccccCeEEecCCCceEEeecccce
Q 007025 399 -KRIALGAARGLLYLHE----------QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447 (621)
Q Consensus 399 -~~i~~~ia~~L~~LH~----------~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~ 447 (621)
..+...+.+++.+|++ ..++.++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666663 124589999999999999888899999999875
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.82 E-value=2.6e-07 Score=102.21 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=17.9
Q ss_pred cccchhhhcccccccCCCCCCC-CCCCCcceEeccCCCCC
Q 007025 142 LETLQYLRLNNNSLTGAIPPSL-SNMSQLAFLDLSYNNLS 180 (621)
Q Consensus 142 l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~ 180 (621)
+++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.++
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 4445555555555443222222 33455555555555553
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.73 E-value=1.6e-06 Score=89.34 Aligned_cols=126 Identities=17% Similarity=0.190 Sum_probs=79.3
Q ss_pred CCCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccc--cccccccccccc--ccccCC-----CCCCC-
Q 007025 70 DGLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIG--KLSKLLTLDLSN--NFFTGP-----IPSTV- 139 (621)
Q Consensus 70 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~- 139 (621)
...+..|+|++|.-. .+++ + .+++|+.|+|..|.++...-..+. .+++|+.|+|+. |...|. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 357889999876211 2333 4 378999999988887632222333 688999998863 222111 11122
Q ss_pred -cccccchhhhcccccccCCCCCCC---CCCCCcceEeccCCCCCCC----CCCc-----cccceeccCCcc
Q 007025 140 -SHLETLQYLRLNNNSLTGAIPPSL---SNMSQLAFLDLSYNNLSGP----VPSF-----HAKTFNITGNSL 198 (621)
Q Consensus 140 -~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~l~l~~N~l~~~----~p~~-----~~~~~~l~~N~~ 198 (621)
..+++|+.|+|++|.+....+..+ ..+++|+.|+|+.|.|++. ++.. ..+.++|++|.+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 347899999999988874332222 2478899999999988763 2221 236778888765
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.72 E-value=3.4e-05 Score=80.68 Aligned_cols=122 Identities=14% Similarity=0.117 Sum_probs=86.5
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccccccc-----CCCCCCCcccccch
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT-----GPIPSTVSHLETLQ 146 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~ 146 (621)
.++.|+|+. +++..-...|.+ .+|+.+.| .|.++..-+..|.++++|+.++|.+|.+. ..-+..|.+|++|+
T Consensus 227 ~L~~l~l~~-~l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPE-NVSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCT-TCCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCC-CccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 577777776 466555566777 78999998 45566555778888999999999888765 24456788889999
Q ss_pred hhhcccccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc----cceeccCCcc
Q 007025 147 YLRLNNNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA----KTFNITGNSL 198 (621)
Q Consensus 147 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~l~~N~~ 198 (621)
.++|. |.++..-...|.+|++|+.|.|..| ++...+..|. +.+.+.+|.+
T Consensus 304 ~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 304 RFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp EECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred eEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 99988 4477455678888889999988655 5533333333 5566666644
No 418
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.71 E-value=0.00024 Score=71.43 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=89.8
Q ss_pred CCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcc---cccceeeEEEEecCCceeEEEeeccC
Q 007025 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLIGFCMTTTERLLVYPYMSN 380 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~~ 380 (621)
.+.|+.|....+|+.... +..+++|+.... ....+..|...++.+. ...+.+++++....+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 456899999999998764 678888987532 2446788988888774 25678888888878889999999998
Q ss_pred CChhh-----------hhccC---C-------------------CCCHHHHH---HHH----------------HHHHHH
Q 007025 381 GSVAS-----------RLKAK---P-------------------SLDWATRK---RIA----------------LGAARG 408 (621)
Q Consensus 381 g~L~~-----------~l~~~---~-------------------~l~~~~~~---~i~----------------~~ia~~ 408 (621)
..+.. .++.. . .-+|.... ++. ..+...
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76421 11111 0 01444321 111 111111
Q ss_pred -HHHHhh-cCCCceEEcccccCeEEecCCCceEEeecc
Q 007025 409 -LLYLHE-QCDPKIIHRDVKAANILLDEYYEAVVGDFG 444 (621)
Q Consensus 409 -L~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfg 444 (621)
...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2357899999999999999887 8899974
No 419
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.69 E-value=0.00031 Score=69.80 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=55.0
Q ss_pred CCcCCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccc---cceeeEEEEecCCceeEEEee
Q 007025 301 FSSKNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR---NLLRLIGFCMTTTERLLVYPY 377 (621)
Q Consensus 301 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~ 377 (621)
....+.+|.|..+.||+....||+.|+||+-..... .....|..|...|+.+.-. -+.+++++ +..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 344567899999999999999999999998754332 2233578899988877421 24455554 235789999
Q ss_pred ccCCCh
Q 007025 378 MSNGSV 383 (621)
Q Consensus 378 ~~~g~L 383 (621)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 887653
No 420
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.67 E-value=6.8e-07 Score=98.86 Aligned_cols=89 Identities=16% Similarity=0.125 Sum_probs=65.4
Q ss_pred ccCCCCCcEEEcccCccCCCCCccccc-cccccccccccccccCCCCCCC-cccccchhhhcccccccCCCCC-CCCCCC
Q 007025 91 IGNLTNLQLVLLQNNNISGHIPTEIGK-LSKLLTLDLSNNFFTGPIPSTV-SHLETLQYLRLNNNSLTGAIPP-SLSNMS 167 (621)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~-~~~~l~ 167 (621)
+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..++
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~ 506 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLE 506 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGG
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCC
Confidence 55667777777765 454433344444 7889999999999875544444 6689999999999999644333 455689
Q ss_pred CcceEeccCCCCC
Q 007025 168 QLAFLDLSYNNLS 180 (621)
Q Consensus 168 ~L~~l~l~~N~l~ 180 (621)
+|+.|++++|+++
T Consensus 507 ~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 507 TMRSLWMSSCSVS 519 (594)
T ss_dssp GSSEEEEESSCCB
T ss_pred CCCEEeeeCCCCC
Confidence 9999999999985
No 421
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.53 E-value=9.8e-05 Score=77.19 Aligned_cols=121 Identities=15% Similarity=0.105 Sum_probs=91.6
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRL 150 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 150 (621)
..++.+.|. +++..+-...|.++++|+.|+|..| ++..-...|.+ .+|+.+.| .|.++..-+..|.+|++|+.+++
T Consensus 203 ~~L~~l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLP-VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECC-TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeC-CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 367788887 4477677788999999999999976 55455667777 89999999 45566455678999999999999
Q ss_pred cccccc-----CCCCCCCCCCCCcceEeccCCCCCCCCCCccc-----cceeccCC
Q 007025 151 NNNSLT-----GAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA-----KTFNITGN 196 (621)
Q Consensus 151 ~~N~l~-----~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-----~~~~l~~N 196 (621)
.+|.+. ..-+..|.+|++|+.++|.+ .++......|. +.+.|..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc
Confidence 998875 34567899999999999994 47644444444 45566444
No 422
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.40 E-value=0.00074 Score=68.09 Aligned_cols=155 Identities=9% Similarity=0.049 Sum_probs=85.4
Q ss_pred cChHHHHHHhcCCCcC-----CeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhccccc--ceee
Q 007025 289 FHFKELQSATSNFSSK-----NLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRL 361 (621)
Q Consensus 289 ~~~~~~~~~~~~~~~~-----~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l 361 (621)
++.+++...-..|... +.|+.|....+|+....+| .+++|+..... ....+..|..++..+...+ +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3344555554555542 3456677889999887665 67889886421 1224556777776664222 2333
Q ss_pred EEE------EecCCceeEEEeeccCCChhh--------------hhcc---C-C-C----C---CHHHHHH---------
Q 007025 362 IGF------CMTTTERLLVYPYMSNGSVAS--------------RLKA---K-P-S----L---DWATRKR--------- 400 (621)
Q Consensus 362 ~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~---~-~-~----l---~~~~~~~--------- 400 (621)
+.. ....+..+++++|++|..+.. .++. . . + . .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112355789999998865321 0110 0 0 0 1 1222110
Q ss_pred ---HHHHHHHHHHHHhhc----CCCceEEcccccCeEEecCCCceEEeecccce
Q 007025 401 ---IALGAARGLLYLHEQ----CDPKIIHRDVKAANILLDEYYEAVVGDFGLAK 447 (621)
Q Consensus 401 ---i~~~ia~~L~~LH~~----~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~ 447 (621)
+...+.+.+.++++. .+.+++|+|+.+.|||++++..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455555532 24579999999999999987666899999775
No 423
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.36 E-value=9.2e-06 Score=83.67 Aligned_cols=126 Identities=16% Similarity=0.162 Sum_probs=79.3
Q ss_pred CCEEEEecCCCCC---------cccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCc-
Q 007025 71 GLVTGLGAPSQNL---------SGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVS- 140 (621)
Q Consensus 71 ~~v~~l~l~~~~l---------~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 140 (621)
.++..|.+.++.. .+.++..+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 4677777765432 1234455677899999999888311 2443 4 388999999988887633222333
Q ss_pred -ccccchhhhccc--ccccCC-----CCCCC--CCCCCcceEeccCCCCCCCCCC--------ccccceeccCCccc
Q 007025 141 -HLETLQYLRLNN--NSLTGA-----IPPSL--SNMSQLAFLDLSYNNLSGPVPS--------FHAKTFNITGNSLI 199 (621)
Q Consensus 141 -~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~l~l~~N~l~~~~p~--------~~~~~~~l~~N~~~ 199 (621)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+++..+. ...+.++|+.|.+.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 688999998863 222211 11122 2478999999999988742211 12377888888764
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.25 E-value=0.0016 Score=65.08 Aligned_cols=128 Identities=15% Similarity=0.105 Sum_probs=74.9
Q ss_pred CCeeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhcccccc-eeeEEEEecCCceeEEEeec-cCC
Q 007025 304 KNLVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVYPYM-SNG 381 (621)
Q Consensus 304 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~-~~g 381 (621)
.+.|+.|....+|+. ..+++|+...... ......+|...+..+...++ .+++++ ..+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~--~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE--EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc--ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 567888999999998 4688888754321 11223567777776653333 355554 344467899999 554
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhh-----------------------------------------------
Q 007025 382 SVASRLKAKPSLDWATRKRIALGAARGLLYLHE----------------------------------------------- 414 (621)
Q Consensus 382 ~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~----------------------------------------------- 414 (621)
++...... .+..++.++++.|.-||+
T Consensus 94 ~l~~~~~~-------~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 94 TMSPEKFK-------TRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp ECCHHHHH-------HSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred cCCHhhHh-------hhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 44210000 000112222222222221
Q ss_pred ---cCCCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 415 ---QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 415 ---~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
..++.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12345899999999999 5566789999998864
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.19 E-value=0.0012 Score=66.83 Aligned_cols=33 Identities=39% Similarity=0.320 Sum_probs=28.2
Q ss_pred CCceEEcccccCeEEecCC----CceEEeecccceec
Q 007025 417 DPKIIHRDVKAANILLDEY----YEAVVGDFGLAKLL 449 (621)
Q Consensus 417 ~~~ivH~Dlkp~NILl~~~----~~~kl~Dfgla~~~ 449 (621)
.+.++|||+.+.|||++.+ +.+.|+||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 4589999999999999874 67899999988653
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.18 E-value=2.1e-05 Score=71.56 Aligned_cols=83 Identities=14% Similarity=0.098 Sum_probs=39.6
Q ss_pred CCcEEEcccCccCCCCCcccccccccccccccccc-ccCCCCCCCccc----ccchhhhccccc-ccCCCCCCCCCCCCc
Q 007025 96 NLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF-FTGPIPSTVSHL----ETLQYLRLNNNS-LTGAIPPSLSNMSQL 169 (621)
Q Consensus 96 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 169 (621)
.|+.|||+++.++..--..+.++++|+.|+|+++. |+..--..++.+ ++|++|+|+++. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555442212234455555555555553 432111122222 346666666653 442211234556677
Q ss_pred ceEeccCCC
Q 007025 170 AFLDLSYNN 178 (621)
Q Consensus 170 ~~l~l~~N~ 178 (621)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776653
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.14 E-value=0.003 Score=63.74 Aligned_cols=138 Identities=14% Similarity=0.127 Sum_probs=79.9
Q ss_pred eeeeccccEEEEEEEcCCcEEEEEEeccCcccchhhHHHHHHHHHhhccccc--ceeeEEE-----EecCCceeEEEeec
Q 007025 306 LVGKGGFGNVYKGYLQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN--LLRLIGF-----CMTTTERLLVYPYM 378 (621)
Q Consensus 306 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lv~e~~ 378 (621)
.++ |....||+....+|+.+++|+...... ....+..|..++..+.... +.+++.. ....+..+++|+|+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 466 788899998777787899999863321 2335667777777664222 3444433 11234567899999
Q ss_pred cCCChhh-----------h---hc----cC-----CCCCHHHH----HHH---------------HHHHHHHHHHHhhc-
Q 007025 379 SNGSVAS-----------R---LK----AK-----PSLDWATR----KRI---------------ALGAARGLLYLHEQ- 415 (621)
Q Consensus 379 ~~g~L~~-----------~---l~----~~-----~~l~~~~~----~~i---------------~~~ia~~L~~LH~~- 415 (621)
+|..+.. . ++ .. ...++... ..+ ...+.+.+..+.+.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8754321 0 11 00 11222211 001 11111223333221
Q ss_pred ---CCCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 416 ---CDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 416 ---~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
.++.++|+|+++.|||++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 244789999999999999 4 899999998754
No 428
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.11 E-value=0.0019 Score=67.94 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=48.5
Q ss_pred CeeeeccccEEEEEEEcC--------CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccc-eeeEEEEecCCceeEEE
Q 007025 305 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVY 375 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 375 (621)
+.|+.|....+|+....+ +..+++|+..... ....+..|..++..+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC---cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 567778889999998653 4789999884321 11345578888887754444 566776542 3899
Q ss_pred eeccCCCh
Q 007025 376 PYMSNGSV 383 (621)
Q Consensus 376 e~~~~g~L 383 (621)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 429
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.02 E-value=0.004 Score=64.22 Aligned_cols=138 Identities=16% Similarity=0.158 Sum_probs=81.6
Q ss_pred CeeeeccccEEEEEEEc--------CCcEEEEEEeccCcccchhhHHHHHHHHHhhccccc-ceeeEEEEecCCceeEEE
Q 007025 305 NLVGKGGFGNVYKGYLQ--------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN-LLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 375 (621)
+.+..|-...+|+.... +++.+++|+.... ......+.+|..+++.+.-.+ ..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45666777889998864 2478999986321 122345668998888775323 3566766643 3999
Q ss_pred eeccCCChhhh-----------------hccC-----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 007025 376 PYMSNGSVASR-----------------LKAK-----PSLD--WATRKRIALGAAR-------------------GLLYL 412 (621)
Q Consensus 376 e~~~~g~L~~~-----------------l~~~-----~~l~--~~~~~~i~~~ia~-------------------~L~~L 412 (621)
||++|.+|... ++.. .... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 0111 1112 3445555444322 23333
Q ss_pred hh----c-CCCceEEcccccCeEEecCC----CceEEeeccccee
Q 007025 413 HE----Q-CDPKIIHRDVKAANILLDEY----YEAVVGDFGLAKL 448 (621)
Q Consensus 413 H~----~-~~~~ivH~Dlkp~NILl~~~----~~~kl~Dfgla~~ 448 (621)
.+ . .+..++|+|+.+.|||++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22 1 23479999999999999876 7899999998853
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.96 E-value=0.00055 Score=59.11 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=39.4
Q ss_pred EEecCCCCCc-ccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccccccc
Q 007025 75 GLGAPSQNLS-GTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFT 132 (621)
Q Consensus 75 ~l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 132 (621)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566677775 35554432 46888888888888655666777888888888888765
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.001 Score=57.34 Aligned_cols=57 Identities=23% Similarity=0.271 Sum_probs=47.4
Q ss_pred cEEEcccCccC-CCCCccccccccccccccccccccCCCCCCCcccccchhhhccccccc
Q 007025 98 QLVLLQNNNIS-GHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLT 156 (621)
Q Consensus 98 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 156 (621)
..++.+++.|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 35776554 47999999999999655667889999999999999886
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.90 E-value=7.7e-05 Score=67.78 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=64.7
Q ss_pred CCEEEEecCCCCCcccccccccCCCCCcEEEcccCc-cCCCCCcccccc----cccccccccccc-ccCCCCCCCccccc
Q 007025 71 GLVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNN-ISGHIPTEIGKL----SKLLTLDLSNNF-FTGPIPSTVSHLET 144 (621)
Q Consensus 71 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 144 (621)
-+++.|||+++.++..--..+..+++|+.|+|+++. ++..-=..++.+ ++|++|+|+++. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876545667899999999999985 653211234443 479999999984 77432345778999
Q ss_pred chhhhccccc-cc
Q 007025 145 LQYLRLNNNS-LT 156 (621)
Q Consensus 145 L~~L~l~~N~-l~ 156 (621)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999975 44
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.87 E-value=0.0044 Score=63.75 Aligned_cols=73 Identities=10% Similarity=0.055 Sum_probs=43.8
Q ss_pred CeeeeccccEEEEEEEcC---------CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccc-eeeEEEEecCCceeEE
Q 007025 305 NLVGKGGFGNVYKGYLQD---------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLV 374 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 374 (621)
+.|+.|....+|+....+ +..+++|+...... .......|..++..+...++ .++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 456778888999988654 26888888754321 11124578888877753343 4666554 23789
Q ss_pred EeeccCCCh
Q 007025 375 YPYMSNGSV 383 (621)
Q Consensus 375 ~e~~~~g~L 383 (621)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 434
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.77 E-value=0.005 Score=57.33 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=63.4
Q ss_pred CChhhhhc-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEecCCCceEEeecccceecCCCCCceeec
Q 007025 381 GSVASRLK-AKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHCDSHVTTA 459 (621)
Q Consensus 381 g~L~~~l~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 459 (621)
-+|.+.|. ...+++++++|.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------------
Confidence 37888887 456899999999999999998776221111 1233457889999999987753 1110
Q ss_pred ccccccccchhhhccCCCCCccchHhHHHHHHHHHh
Q 007025 460 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIS 495 (621)
Q Consensus 460 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~ellt 495 (621)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 1223466888763 344677889999999999875
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.77 E-value=0.0075 Score=63.86 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=46.8
Q ss_pred CeeeeccccEEEEEEEcC-CcEEEEEEeccCcccchhhHHHHHHHHHhhcccccc-eeeEEEEecCCceeEEEeeccCCC
Q 007025 305 NLVGKGGFGNVYKGYLQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL-LRLIGFCMTTTERLLVYPYMSNGS 382 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~g~ 382 (621)
+.|+.|-...+|+....+ +..+++|+..... ........|..++..+...++ .++++.+. + .+|+||+++.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 567778889999998765 4788898874322 111123578888888864444 46777663 2 35999998754
Q ss_pred h
Q 007025 383 V 383 (621)
Q Consensus 383 L 383 (621)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 436
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.44 E-value=0.027 Score=57.13 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=28.2
Q ss_pred CCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 417 DPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 417 ~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999987764
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.21 E-value=0.0002 Score=66.24 Aligned_cols=63 Identities=22% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCCEEEEecCCC-CCcc----cccccccCCCCCcEEEcccCccCCC----CCcccccccccccccccccccc
Q 007025 70 DGLVTGLGAPSQ-NLSG----TLSSSIGNLTNLQLVLLQNNNISGH----IPTEIGKLSKLLTLDLSNNFFT 132 (621)
Q Consensus 70 ~~~v~~l~l~~~-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 132 (621)
+..++.|+|++| +|.. .+-..+..-+.|+.|+|++|.|... +...+..=+.|+.|+|++|+|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345666666654 4432 1233444455666666666666521 1222223345666666666655
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.18 E-value=0.0056 Score=63.57 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=52.3
Q ss_pred cccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCC
Q 007025 88 SSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMS 167 (621)
Q Consensus 88 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 167 (621)
...|.++..|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.+|.+|+.++|..| ++..-..+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345666777777777655443 444566667777777775 3344233445666777777777644 4433345666777
Q ss_pred CcceEeccCC
Q 007025 168 QLAFLDLSYN 177 (621)
Q Consensus 168 ~L~~l~l~~N 177 (621)
+|+.+.+..+
T Consensus 335 ~L~~i~ip~s 344 (394)
T 4gt6_A 335 QLERIAIPSS 344 (394)
T ss_dssp TCCEEEECTT
T ss_pred CCCEEEECcc
Confidence 7777777543
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.15 E-value=0.0045 Score=63.83 Aligned_cols=103 Identities=12% Similarity=0.098 Sum_probs=62.3
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.+..+.+..+ +...-...+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.+|++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3444444432 34344456667777777777655 44344556667777777777544 442333456677777777777
Q ss_pred cccccCCCCCCCCCCCCcceEeccCC
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYN 177 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N 177 (621)
+|.++..-...|.++.+|+.+.|..+
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc
Confidence 77666444566777777777777544
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.87 E-value=0.0049 Score=64.00 Aligned_cols=87 Identities=11% Similarity=0.064 Sum_probs=70.0
Q ss_pred cccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCC
Q 007025 88 SSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMS 167 (621)
Q Consensus 88 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 167 (621)
...|..+.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-...|.+|++|+.++|..| ++..-..+|.+++
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 356788999999999766 65455678999999999999755 66344578999999999999877 6645567899999
Q ss_pred CcceEeccCC
Q 007025 168 QLAFLDLSYN 177 (621)
Q Consensus 168 ~L~~l~l~~N 177 (621)
+|+.+++..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999998765
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.72 E-value=0.0056 Score=63.59 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=79.4
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.+.+.++- ...-...|.+++.|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...|.+|.+|+.+.|.
T Consensus 266 ~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 46666666543 33455678899999999996 4565455678999999999999865 553445689999999999997
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCC
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNL 179 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l 179 (621)
.+ ++..-..+|.++++|+.+++.+|..
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 55 6644457899999999999988754
No 442
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.55 E-value=0.088 Score=54.41 Aligned_cols=139 Identities=16% Similarity=0.141 Sum_probs=79.7
Q ss_pred CeeeeccccEEEEEEEcC--------CcEEEEEEeccCcc-----------cchh------hHHHHHHHHHhhccccc-c
Q 007025 305 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNA-----------IGGE------IQFQTEVEMISLAVHRN-L 358 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-----------~~~~------~~~~~e~~~l~~l~H~n-i 358 (621)
+.|..|-...+|+....+ +..|.+++.-.... .+.+ .....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 455557778899988653 36788887643221 1111 12234888887775333 4
Q ss_pred eeeEEEEecCCceeEEEeeccCCChhhh-----------------hccC-----CCCC--HHHHHHHHHHHH--------
Q 007025 359 LRLIGFCMTTTERLLVYPYMSNGSVASR-----------------LKAK-----PSLD--WATRKRIALGAA-------- 406 (621)
Q Consensus 359 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-----------------l~~~-----~~l~--~~~~~~i~~~ia-------- 406 (621)
.++++++.. .+|+||+++-+|... ++.. .... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567777643 289999987554211 0111 1122 233334433321
Q ss_pred --------------HHHHH----Hhhc-CCCceEEcccccCeEEecCC------CceEEeecccce
Q 007025 407 --------------RGLLY----LHEQ-CDPKIIHRDVKAANILLDEY------YEAVVGDFGLAK 447 (621)
Q Consensus 407 --------------~~L~~----LH~~-~~~~ivH~Dlkp~NILl~~~------~~~kl~Dfgla~ 447 (621)
.-+.. |... .+..++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2221 23468999999999999876 789999999875
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.51 E-value=0.0094 Score=61.85 Aligned_cols=110 Identities=11% Similarity=0.019 Sum_probs=80.5
Q ss_pred CEEEEecCCCCCcccccccccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcc
Q 007025 72 LVTGLGAPSQNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLN 151 (621)
Q Consensus 72 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 151 (621)
.++.+.+..+. ...-...|..+..|+.+.+..+.+. ...|..+.+|+.+.+.+| ++..-...|.+|.+|+.++|.
T Consensus 254 ~l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNK-LRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTT-CEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCc-ceeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 34555555443 3355667888999999998877653 356889999999999876 553445678999999999997
Q ss_pred cccccCCCCCCCCCCCCcceEeccCCCCCCCCCCccc
Q 007025 152 NNSLTGAIPPSLSNMSQLAFLDLSYNNLSGPVPSFHA 188 (621)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 188 (621)
++ ++..-..+|.++++|+.+++..| ++......|.
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 363 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ 363 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBT
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhh
Confidence 55 66445678999999999999877 6644344444
No 444
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=95.36 E-value=0.016 Score=38.71 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=21.4
Q ss_pred eeehhhhhHHHHHHHHHHhhhhhhhcccccc
Q 007025 238 ALALGSSLGCISLLILGFGFLLWWRQRHNQQ 268 (621)
Q Consensus 238 ~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~ 268 (621)
.++.+++.++++++++++++++++|+|+.++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 4566677777777777777777777776543
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.95 E-value=0.0016 Score=60.29 Aligned_cols=91 Identities=14% Similarity=0.133 Sum_probs=62.5
Q ss_pred cccccCCCCCcEEEcccC-ccCC----CCCccccccccccccccccccccCC----CCCCCcccccchhhhcccccccCC
Q 007025 88 SSSIGNLTNLQLVLLQNN-NISG----HIPTEIGKLSKLLTLDLSNNFFTGP----IPSTVSHLETLQYLRLNNNSLTGA 158 (621)
Q Consensus 88 ~~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 158 (621)
...+.+-+.|++|+|++| .|.. .+-..+..-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|.|...
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 334556688999999986 7752 1233455567899999999999732 223334557899999999999732
Q ss_pred ----CCCCCCCCCCcceEeccCCC
Q 007025 159 ----IPPSLSNMSQLAFLDLSYNN 178 (621)
Q Consensus 159 ----~p~~~~~l~~L~~l~l~~N~ 178 (621)
+-..+..-+.|+.|+|++|.
T Consensus 114 Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 114 LLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHHhhCCceeEEECCCCc
Confidence 22234444679999998753
No 446
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.62 E-value=0.016 Score=38.56 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=20.5
Q ss_pred eeehhhhhHHHHHHHHHHhhhhhhhcccccc
Q 007025 238 ALALGSSLGCISLLILGFGFLLWWRQRHNQQ 268 (621)
Q Consensus 238 ~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~ 268 (621)
.++.+++.+++++++++.++++++|+|+.++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3556666667777777777777777766554
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.44 E-value=0.21 Score=52.02 Aligned_cols=137 Identities=9% Similarity=0.096 Sum_probs=81.4
Q ss_pred CeeeeccccEEEEEEEcC--------CcEEEEEEeccCcccchhhHHHHHHHHHhhccccc-ceeeEEEEecCCceeEEE
Q 007025 305 NLVGKGGFGNVYKGYLQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN-LLRLIGFCMTTTERLLVY 375 (621)
Q Consensus 305 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 375 (621)
+.+..|-...+|+....+ +..+++|+..... .......+|..+++.+...+ ..++++.+. -++|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 456667778999988753 5788998864322 11223457888887775333 345565432 37899
Q ss_pred eeccCCChhhh--------------h---c---c---------C-CCCCHHHHHHHHHHH-------------------H
Q 007025 376 PYMSNGSVASR--------------L---K---A---------K-PSLDWATRKRIALGA-------------------A 406 (621)
Q Consensus 376 e~~~~g~L~~~--------------l---~---~---------~-~~l~~~~~~~i~~~i-------------------a 406 (621)
||++|..|... + + . . .+.-+.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 99998654210 0 0 0 0 111233333333222 2
Q ss_pred HHHHHHhh---------------------cCCCceEEcccccCeEEecCCCceEEeeccccee
Q 007025 407 RGLLYLHE---------------------QCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKL 448 (621)
Q Consensus 407 ~~L~~LH~---------------------~~~~~ivH~Dlkp~NILl~~~~~~kl~Dfgla~~ 448 (621)
..+.+|.+ ..+..++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 11346899999999999 8888999999998863
No 448
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.39 E-value=0.076 Score=54.46 Aligned_cols=88 Identities=11% Similarity=0.063 Sum_probs=41.2
Q ss_pred cccCCCCCcEEEcccCccCCCCCccccccccccccccccccccCCCCCCCcccccchhhhcccccccCCCCCCCCCCCCc
Q 007025 90 SIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNFFTGPIPSTVSHLETLQYLRLNNNSLTGAIPPSLSNMSQL 169 (621)
Q Consensus 90 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 169 (621)
.+....+|+.+.+..+ +...-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|..+++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444455555555433 22233344555555555555444 33222334455555555555432 332223445555555
Q ss_pred ceEeccCCCCC
Q 007025 170 AFLDLSYNNLS 180 (621)
Q Consensus 170 ~~l~l~~N~l~ 180 (621)
+.+.+.+|.++
T Consensus 289 ~~i~l~~~~i~ 299 (379)
T 4h09_A 289 TKVVMDNSAIE 299 (379)
T ss_dssp CEEEECCTTCC
T ss_pred ccccccccccc
Confidence 55555555554
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=93.67 E-value=0.036 Score=36.80 Aligned_cols=29 Identities=17% Similarity=0.437 Sum_probs=17.6
Q ss_pred ehhhhhHHHHHHHHHHhhhhhhhcccccc
Q 007025 240 ALGSSLGCISLLILGFGFLLWWRQRHNQQ 268 (621)
Q Consensus 240 ~~~~~~~~~~l~~~~~~~~~~~r~~~~~~ 268 (621)
+++.++|+++++++++++++|+|||+.++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhhc
Confidence 44455555566666666677777766543
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.80 E-value=1.4 Score=45.47 Aligned_cols=30 Identities=30% Similarity=0.427 Sum_probs=25.3
Q ss_pred ceEEcccccCeEEe------cCCCceEEeeccccee
Q 007025 419 KIIHRDVKAANILL------DEYYEAVVGDFGLAKL 448 (621)
Q Consensus 419 ~ivH~Dlkp~NILl------~~~~~~kl~Dfgla~~ 448 (621)
.++|+|+.+.|||+ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998863
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.42 E-value=1.5 Score=40.69 Aligned_cols=116 Identities=9% Similarity=0.055 Sum_probs=78.7
Q ss_pred ccccceeeEEEEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCeEEec
Q 007025 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLD 433 (621)
Q Consensus 354 ~H~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NILl~ 433 (621)
.||+++.. .+-...+...+.++.-+.+.=...++ .++...+++++.+|+....++++. +|--|.|+|++++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik---~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK---SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG---GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH---hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEc
Confidence 48888865 45556666666666544322222232 478899999999999988777654 7888999999999
Q ss_pred CCCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcc
Q 007025 434 EYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501 (621)
Q Consensus 434 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~ 501 (621)
.++.+++.-.|+...+.+.. +.+| .=.-.+=+++..+++++..|+
T Consensus 114 ~~~~p~i~~RGik~~l~P~~-------------~~ee----------~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 114 RDGLPIAKTRGLQNVVDPLP-------------VSEA----------EFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp TTSCEEESCCEETTTBSCCC-------------CCHH----------HHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCEEEEEccCccCCCCCC-------------CCHH----------HHHHHHHHHHHHHHcCCCCHH
Confidence 99999998777643322110 0111 113356778888999988886
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=86.47 E-value=0.26 Score=32.51 Aligned_cols=27 Identities=30% Similarity=0.363 Sum_probs=13.2
Q ss_pred eeehhhhhHHHHHHHHHHhhhhhhhcc
Q 007025 238 ALALGSSLGCISLLILGFGFLLWWRQR 264 (621)
Q Consensus 238 ~~~~~~~~~~~~l~~~~~~~~~~~r~~ 264 (621)
.++++++.++++++++.+.++++||||
T Consensus 14 ~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 14 AVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred EEEeehhHHHHHHHHHHHHheeEeeec
Confidence 344555555555442444445555543
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.63 E-value=2.8 Score=38.93 Aligned_cols=115 Identities=15% Similarity=0.087 Sum_probs=77.7
Q ss_pred ccccceeeEEEEecCCceeEEEeeccCCChhhhhccCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCceEEcccccCeEEe
Q 007025 354 VHRNLLRLIGFCMTTTERLLVYPYMSNGSVASRLKAKPSLDWATRKRIALGAARGLL-YLHEQCDPKIIHRDVKAANILL 432 (621)
Q Consensus 354 ~H~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlkp~NILl 432 (621)
.||++ -..+-.+.+...+.++.-+++.=...+ ..++...+++++.+|+.... ++++. +|--|.|+|+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i---~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI---RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH---HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH---HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEE
Confidence 47877 444446667777777765443333333 24788999999999998777 66654 788899999999
Q ss_pred cCCCceEEeecccceecCCCCCceeecccccccccchhhhccCCCCCccchHhHHHHHHHHHhCCCCcc
Q 007025 433 DEYYEAVVGDFGLAKLLDHCDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGLRALE 501 (621)
Q Consensus 433 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvil~elltg~~p~~ 501 (621)
+.++.++|.-.|+-..+.+.. +.+|-+ .-.+=+++..++.++..|+
T Consensus 118 ~~~~~p~i~hRGi~~~lpP~e-------------~~ee~f----------l~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 118 NRALEPFFLHVGVKESLPPDE-------------WDDERL----------LREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CTTCCEEESCCEETTTBSSCS-------------CCHHHH----------HHHHHHHHHHHTTCSSCHH
T ss_pred eCCCcEEEEEcCCcccCCCCC-------------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 999999998777643322110 111211 3356678888888887775
No 454
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=80.33 E-value=0.77 Score=28.77 Aligned_cols=23 Identities=22% Similarity=0.329 Sum_probs=13.5
Q ss_pred hhhHHHHHHHHHHhhhhhhhccc
Q 007025 243 SSLGCISLLILGFGFLLWWRQRH 265 (621)
Q Consensus 243 ~~~~~~~l~~~~~~~~~~~r~~~ 265 (621)
.+++++++++++.++.+++|||+
T Consensus 13 gVvglll~vii~l~~~~~iRRr~ 35 (35)
T 1iij_A 13 TVVGVLLFLILVVVVGILIKRRR 35 (35)
T ss_dssp HHHHHHHHHHHTTTTTHHHHHCC
T ss_pred HHHHHHHHHHHHHHhheEEeecC
Confidence 33445555566666667777664
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.61 E-value=0.21 Score=52.72 Aligned_cols=62 Identities=6% Similarity=-0.016 Sum_probs=18.3
Q ss_pred cCCeeeeccccEEEEEEEcC-CcEEEE------EEeccCccc-chhhHHHHHHHHHhhcccccceeeEEEEec
Q 007025 303 SKNLVGKGGFGNVYKGYLQD-GTVVAV------KRLKDGNAI-GGEIQFQTEVEMISLAVHRNLLRLIGFCMT 367 (621)
Q Consensus 303 ~~~~iG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 367 (621)
+.+.|| ||.||+|.+.. ..+||| |..+..... +....|.+|..+....+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 446666 99999999864 467888 766543322 223357788888888899999999887653
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=77.46 E-value=1.3 Score=28.49 Aligned_cols=23 Identities=13% Similarity=0.024 Sum_probs=9.2
Q ss_pred hhhhhHHHHHH-HHHHhhhhhhhc
Q 007025 241 LGSSLGCISLL-ILGFGFLLWWRQ 263 (621)
Q Consensus 241 ~~~~~~~~~l~-~~~~~~~~~~r~ 263 (621)
.++++++++.+ +++...+++|||
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeehHHHHHHHHHHHHHHHHeec
Confidence 44444444322 233333444544
No 457
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=64.57 E-value=3.1 Score=25.51 Aligned_cols=26 Identities=31% Similarity=0.599 Sum_probs=14.3
Q ss_pred ehhhhhHHHHHHHHHHhhhhhhhccc
Q 007025 240 ALGSSLGCISLLILGFGFLLWWRQRH 265 (621)
Q Consensus 240 ~~~~~~~~~~l~~~~~~~~~~~r~~~ 265 (621)
++.++++.+++..+....|++||-|+
T Consensus 9 alt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 9 ALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCceeEEEcccc
Confidence 34445555555555555666776554
No 458
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=50.75 E-value=4.6 Score=25.73 Aligned_cols=14 Identities=14% Similarity=0.470 Sum_probs=7.1
Q ss_pred HHHHhhhhhhhccc
Q 007025 252 ILGFGFLLWWRQRH 265 (621)
Q Consensus 252 ~~~~~~~~~~r~~~ 265 (621)
+...++++.|+++.
T Consensus 23 isLIiLi~~w~qKP 36 (39)
T 2l6w_A 23 ISLIILIMLWQKKP 36 (39)
Confidence 33444455566554
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.98 E-value=36 Score=26.94 Aligned_cols=13 Identities=0% Similarity=-0.010 Sum_probs=5.3
Q ss_pred ccccccccccccc
Q 007025 114 EIGKLSKLLTLDL 126 (621)
Q Consensus 114 ~~~~l~~L~~L~L 126 (621)
.|.++++|+.+.|
T Consensus 15 aF~~c~~L~~i~i 27 (100)
T 2lz0_A 15 LFAGNTVIREITV 27 (100)
T ss_dssp TTTTCTTCCCEEE
T ss_pred HhcCCCCCcEEEc
Confidence 3344444444433
No 460
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=40.83 E-value=17 Score=25.23 Aligned_cols=17 Identities=24% Similarity=0.411 Sum_probs=7.3
Q ss_pred hhhhhHHHHHHHHHHhh
Q 007025 241 LGSSLGCISLLILGFGF 257 (621)
Q Consensus 241 ~~~~~~~~~l~~~~~~~ 257 (621)
+++.+|.++++++.+++
T Consensus 14 ~svl~GLLLL~Lii~~L 30 (54)
T 2l8s_A 14 LSAFAGLLLLMLLILAL 30 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444444
No 461
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=39.03 E-value=20 Score=22.07 Aligned_cols=24 Identities=17% Similarity=0.140 Sum_probs=12.7
Q ss_pred ehhhhhHHHHHHHHHHhhhhhhhc
Q 007025 240 ALGSSLGCISLLILGFGFLLWWRQ 263 (621)
Q Consensus 240 ~~~~~~~~~~l~~~~~~~~~~~r~ 263 (621)
+.|++++.++.+++.+..++||+|
T Consensus 9 IaGIVvgdi~~t~~i~~~vy~~~r 32 (33)
T 2l34_A 9 LAGIVVGDLVLTVLIALAVYFLGR 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEeEeHHHHHHHHHHHHHHhheec
Confidence 345555555555555555555543
No 462
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=34.34 E-value=23 Score=23.23 Aligned_cols=17 Identities=29% Similarity=0.358 Sum_probs=6.8
Q ss_pred hhhhhHHHHHHHHHHhh
Q 007025 241 LGSSLGCISLLILGFGF 257 (621)
Q Consensus 241 ~~~~~~~~~l~~~~~~~ 257 (621)
+++.+|.++++++.+++
T Consensus 15 ~s~l~GLllL~li~~~L 31 (42)
T 2k1a_A 15 VGVLGGLLLLTILVLAM 31 (42)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33334444444443333
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.34 E-value=48 Score=26.17 Aligned_cols=49 Identities=18% Similarity=0.077 Sum_probs=36.6
Q ss_pred CCCcccccccccCCCCCcEEEcccCccCCCCCcccccccccccccccccc
Q 007025 81 QNLSGTLSSSIGNLTNLQLVLLQNNNISGHIPTEIGKLSKLLTLDLSNNF 130 (621)
Q Consensus 81 ~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 130 (621)
.+++.+-...|.++++|+.+.|-.+ ++.+-...|.++.+|+.+.+....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 3455555678999999999999876 443556788889999988886543
No 464
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=25.66 E-value=56 Score=21.57 Aligned_cols=31 Identities=10% Similarity=-0.134 Sum_probs=17.6
Q ss_pred eeeeehhhhhHHHHHHHHHHhhhhhhhcccc
Q 007025 236 KIALALGSSLGCISLLILGFGFLLWWRQRHN 266 (621)
Q Consensus 236 ~~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~ 266 (621)
...-+++..+++++++++.++++-.++++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 3444455555555555666666666666554
Done!