BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007035
(621 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 125/205 (60%), Gaps = 4/205 (1%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
+A RY V + +G +F +V +A D V LK+++N+K F Q+ +EI++L+ + K D
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
+ +++ + + F H+ + ELL NLYE K N+ G F+L ++ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSIL 210
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEV 591
+ L+ LH IIHCDLKPENIL+K R IK+ID GSSC++ + +QSR YRAPEV
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEV 270
Query: 592 IIGLPYDQKIDLWSLGCILAELWTG 616
I+G Y ID+WSLGCILAEL TG
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 125/205 (60%), Gaps = 4/205 (1%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
+A RY V + +G +F +V +A D V LK+++N+K F Q+ +EI++L+ + K D
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
+ +++ + + F H+ + ELL NLYE K N+ G F+L ++ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSIL 210
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEV 591
+ L+ LH IIHCDLKPENIL+K R IK+ID GSSC++ + +QSR YRAPEV
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEV 270
Query: 592 IIGLPYDQKIDLWSLGCILAELWTG 616
I+G Y ID+WSLGCILAEL TG
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 124/205 (60%), Gaps = 4/205 (1%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
+A RY V + +G F +V +A D V LK+++N+K F Q+ +EI++L+ + K D
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
+ +++ + + F H+ + ELL NLYE K N+ G F+L ++ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSIL 210
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEV 591
+ L+ LH IIHCDLKPENIL+K R IK+ID GSSC++ + +QSR YRAPEV
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEV 270
Query: 592 IIGLPYDQKIDLWSLGCILAELWTG 616
I+G Y ID+WSLGCILAEL TG
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY + +G +F +V +A D V +KIIKN K F +Q+ E++LL+L+NK+D
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+++I+ L +F HL +V E+L NLY+ + G +L + +Q AL
Sbjct: 96 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG----VSLNLTRKFAQQMCTAL 151
Query: 535 EYLHS--LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
+L + L IIHCDLKPENIL+ + +R IKI+D GSSC + +QSR YR+PEV+
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 211
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
+G+PYD ID+WSLGCIL E+ TGE
Sbjct: 212 LGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY + +G +F +V +A D V +KIIKN K F +Q+ E++LL+L+NK+D
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+++I+ L +F HL +V E+L NLY+ + G +L + +Q AL
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG----VSLNLTRKFAQQMCTAL 170
Query: 535 EYLHS--LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
+L + L IIHCDLKPENIL+ + +R IKI+D GSSC + +QSR YR+PEV+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
+G+PYD ID+WSLGCIL E+ TGE
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY + +G +F +V +A D V +KIIKN K F +Q+ E++LL+L+NK+D
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+++I+ L +F HL +V E+L NLY+ + G +L + +Q AL
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG----VSLNLTRKFAQQMCTAL 170
Query: 535 EYLHS--LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
+L + L IIHCDLKPENIL+ + +R IKI+D GSSC + +QSR YR+PEV+
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVL 230
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
+G+PYD ID+WSLGCIL E+ TGE
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 18/218 (8%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN----- 468
RY + LG FS V+ A+D+ V +KI++ DK + + + DEIKLL+ VN
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 469 KNDPADEHHILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
K D +HIL+L D+F H H+ +V E+L NL K + G L ++
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG----IPLIYVK 134
Query: 525 VITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCE----IKIIDLGSSCFQTDNLCL 579
I++Q L L+Y+H GIIH D+KPEN+L++ E IKI DLG++C+ ++
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTN 194
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+Q+R YR+PEV++G P+ D+WS C++ EL TG+
Sbjct: 195 SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 18/218 (8%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN----- 468
RY + LG FS V+ A+D+ V +KI++ DK + + + DEIKLL+ VN
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 469 KNDPADEHHILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
K D +HIL+L D+F H H+ +V E+L NL K + G L ++
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG----IPLIYVK 134
Query: 525 VITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCE----IKIIDLGSSCFQTDNLCL 579
I++Q L L+Y+H GIIH D+KPEN+L++ E IKI DLG++C+ ++
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTN 194
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+Q+R YR+PEV++G P+ D+WS C++ EL TG+
Sbjct: 195 SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 22/224 (9%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNK 469
V++ RY + + LG AF KV + D G V +KI+KN + + + EI++L+ +N
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNT 70
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
DP +++ ++F H H+ IV ELL + Y+F K N G F L ++ + Q
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKEN----GFLPFRLDHIRKMAYQ 126
Query: 530 CLEALEYLHSLGIIHCDLKPENIL-------------IKSYQRC----EIKIIDLGSSCF 572
+++ +LHS + H DLKPENIL IK +R +IK++D GS+ +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186
Query: 573 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
++ V +R YRAPEVI+ L + Q D+WS+GCIL E + G
Sbjct: 187 DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 22/224 (9%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNK 469
V++ RY + + LG AF KV + D G V +KI+KN + + + EI++L+ +N
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNT 70
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
DP +++ ++F H H+ IV ELL + Y+F K N G F L ++ + Q
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKEN----GFLPFRLDHIRKMAYQ 126
Query: 530 CLEALEYLHSLGIIHCDLKPENIL-------------IKSYQRC----EIKIIDLGSSCF 572
+++ +LHS + H DLKPENIL IK +R +IK++D GS+ +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186
Query: 573 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
++ V R YRAPEVI+ L + Q D+WS+GCIL E + G
Sbjct: 187 DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 22/220 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQD-LHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
RY + LG F +V Q D G V LKIIKN + + + + EI +L+ +N+ DP
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPD 93
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
+++ ++++D+F + H+ I ELL + ++F K N + + +++ + Q +A
Sbjct: 94 NKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLP----YPIHQVRHMAFQLCQA 149
Query: 534 LEYLHSLGIIHCDLKPENILI-----------------KSYQRCEIKIIDLGSSCFQTDN 576
+++LH + H DLKPENIL +S + ++++D GS+ F ++
Sbjct: 150 VKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEH 209
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V +R YRAPEVI+ L + Q D+WS+GCI+ E + G
Sbjct: 210 HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
RY + LG F KV + D G V LKII+N + + + EI +LK + + D
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
++ + + D+F H+ I ELL N +EF K E+ + Y L ++ + Q A
Sbjct: 112 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLK---ENNFQPY-PLPHVRHMAYQLCHA 167
Query: 534 LEYLHSLGIIHCDLKPENILI-----------------KSYQRCEIKIIDLGSSCFQTDN 576
L +LH + H DLKPENIL KS + I++ D GS+ F ++
Sbjct: 168 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH 227
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V +R YR PEVI+ L + Q D+WS+GCIL E + G
Sbjct: 228 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
RY + LG F KV + D G V LKII+N + + + EI +LK + + D
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 88
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
++ + + D+F H+ I ELL N +EF K E+ + Y L ++ + Q A
Sbjct: 89 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLK---ENNFQPY-PLPHVRHMAYQLCHA 144
Query: 534 LEYLHSLGIIHCDLKPENILI-----------------KSYQRCEIKIIDLGSSCFQTDN 576
L +LH + H DLKPENIL KS + I++ D GS+ F ++
Sbjct: 145 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH 204
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V +R YR PEVI+ L + Q D+WS+GCIL E + G
Sbjct: 205 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
RY + LG F KV + D G V LKII+N + + + EI +LK + + D
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 79
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
++ + + D+F H+ I ELL N +EF K E+ + Y L ++ + Q A
Sbjct: 80 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLK---ENNFQPY-PLPHVRHMAYQLCHA 135
Query: 534 LEYLHSLGIIHCDLKPENILI-----------------KSYQRCEIKIIDLGSSCFQTDN 576
L +LH + H DLKPENIL KS + I++ D GS+ F ++
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH 195
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V +R YR PEVI+ L + Q D+WS+GCIL E + G
Sbjct: 196 HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 56/265 (21%)
Query: 405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLL 464
P+ + + GRY+V LG FS V+ D+ V +K++K+ + + + +LDEIKLL
Sbjct: 22 PVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLL 81
Query: 465 KLVNKNDPADEHH--ILRLYDYF----YHLEHLFIVCELLRANLYEFQKFNQESGGEAYF 518
K V ++DP+D + +++L D F + H+ +V E+L +L ++ + G
Sbjct: 82 KCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG----L 137
Query: 519 TLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILI----------------------- 554
+ ++ I RQ L+ L+YLHS IIH D+KPENIL+
Sbjct: 138 PVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAP 197
Query: 555 ----------------------KSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
++ + +KI DLG++C+ + +Q+R YR+ EV+
Sbjct: 198 PPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVL 257
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
IG Y D+WS C+ EL TG+
Sbjct: 258 IGAGYSTPADIWSTACMAFELATGD 282
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D G++V +K K + F +Q+ E+ LLK
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKC 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q + E E R+ +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIHMELDHE------RMSYL 129
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + N + YV +R
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTASTNFMMTPYVVTR 187
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ EL G V
Sbjct: 188 YYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 21/217 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D G++V +K K + F +Q+ E+ LLK
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q + E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIHMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + N + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCLI 621
YRAPEVI+G+ Y +D+WS+GCI+ EL G C+I
Sbjct: 190 YYRAPEVILGMGYAANVDIWSVGCIMGELVKG--CVI 224
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 58/258 (22%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
GRY+V LG FS V+ + D+ V +K++K+ + + + +LDEI+LLK V +DP
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPN 96
Query: 474 DEHH--ILRLYDYF----YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
D + +++L D F + H+ +V E+L +L ++ + G L ++ I
Sbjct: 97 DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG----LPLPCVKKII 152
Query: 528 RQCLEALEYLHS-LGIIHCDLKPENILI-------------------------------- 554
+Q L+ L+YLH+ IIH D+KPENIL+
Sbjct: 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212
Query: 555 ---------------KSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQ 599
K+ ++ ++KI DLG++C+ + +Q+R YR+ EV+IG Y+
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 272
Query: 600 KIDLWSLGCILAELWTGE 617
D+WS C+ EL TG+
Sbjct: 273 PADIWSTACMAFELATGD 290
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 58/258 (22%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
GRY+V LG FS V+ + D+ V +K++K+ + + + +LDEI+LLK V +DP
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPN 80
Query: 474 DEHH--ILRLYDYF----YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
D + +++L D F + H+ +V E+L +L ++ + G L ++ I
Sbjct: 81 DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG----LPLPCVKKII 136
Query: 528 RQCLEALEYLHS-LGIIHCDLKPENILI-------------------------------- 554
+Q L+ L+YLH+ IIH D+KPENIL+
Sbjct: 137 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 196
Query: 555 ---------------KSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQ 599
K+ ++ ++KI DLG++C+ + +Q+R YR+ EV+IG Y+
Sbjct: 197 APATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 256
Query: 600 KIDLWSLGCILAELWTGE 617
D+WS C+ EL TG+
Sbjct: 257 PADIWSTACMAFELATGD 274
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K K F ++ E++LLK
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKH 89
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 90 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 136
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 194
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---DQSLDEIKLLKLVNKNDP 472
Y + E +G+ A+ V A+ TG V +K I N D ++L E+K+LK ++
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 116
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
ILR + + +++V +L+ ++L++ +Q TL ++ Q L
Sbjct: 117 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP------LTLEHVRYFLYQLLR 170
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDN----LCLYVQSRS 585
L+Y+HS +IH DLKP N+L+ + CE+KI D G + C + YV +R
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 586 YRAPEVIIGL-PYDQKIDLWSLGCILAEL 613
YRAPE+++ L Y Q IDLWS+GCI E+
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 29/220 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 84
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 85 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 131
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTADEMTGY 189
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 84
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 85 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 131
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTADEMTGY 189
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 84
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 85 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 131
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTADEMTGY 189
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---DQSLDEIKLLKLVNKNDP 472
Y + E +G+ A+ V A+ TG V +K I N D ++L E+K+LK ++
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 115
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
ILR + + +++V +L+ ++L++ +Q TL ++ Q L
Sbjct: 116 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP------LTLEHVRYFLYQLLR 169
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDN----LCLYVQSRS 585
L+Y+HS +IH DLKP N+L+ + CE+KI D G + C + YV +R
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 586 YRAPEVIIGL-PYDQKIDLWSLGCILAEL 613
YRAPE+++ L Y Q IDLWS+GCI E+
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEM 256
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 96
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 97 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 143
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 201
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 89
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 90 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 136
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 194
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 89
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 90 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 136
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 137 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 194
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 83
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 84 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 130
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 188
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 97
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 98 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 144
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 202
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 100
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 101 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 147
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 205
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 80 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 126
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 184
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 88
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 89 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 135
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 193
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 83
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 84 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 130
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 188
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 80 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 126
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 184
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 80 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 126
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 184
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 84
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 85 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 131
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 189
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 82
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 83 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 129
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 187
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 19 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 76
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 77 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 123
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 124 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 181
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 18 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 75
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 76 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 122
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 123 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 180
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 100
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 101 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 147
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMXGY 205
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 29/218 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 74
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 75 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 121
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 179
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 29/218 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 74 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 120
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 178
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 82
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 83 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 129
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 187
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 29/218 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 74
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 75 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 121
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 179
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDAGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDYGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V + D+ +G+ + +K K + F ++ E++LLK
Sbjct: 49 VPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKH 106
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 107 MKHEN------VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 153
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 154 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 211
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+ +D+WS+GCI+AEL TG
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDP 472
Y ++GS A+ V A D +G V +K + + F ++ E+ LLK + +
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN- 84
Query: 473 ADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQ--KFNQESGGEAYFTLGRLQ 524
++ L D F L ++V ++ +L + KF++E ++Q
Sbjct: 85 -----VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEE----------KIQ 129
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR 584
+ Q L+ L+Y+HS G++H DLKP N+ + + CE+KI+D G + + YV +R
Sbjct: 130 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN--EDCELKILDFGLARHADAEMTGYVVTR 187
Query: 585 SYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
YRAPEVI+ + Y+Q +D+WS+GCI+AE+ TG+
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDRGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 96
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 97 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 143
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 201
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 97
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 98 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 144
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 202
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 25/209 (11%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478
+GS A+ V A D TG V +K + + F ++ E++LLK + ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR------HENV 86
Query: 479 LRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+ L D F E L ++V + +L + K E GE R+Q + Q L+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGE-----DRIQFLVYQMLK 139
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
L Y+H+ GIIH DLKP N+ + + CE+KI+D G + + V +R YRAPEVI
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVN--EDCELKILDFGLARQADSEMXGXVVTRWYRAPEVI 197
Query: 593 IG-LPYDQKIDLWSLGCILAELWTGEVCL 620
+ + Y Q +D+WS+GCI+AE+ TG+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS--QVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 83
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 84 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 130
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 188
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDGGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDP 472
Y ++GS A+ V A D +G V +K + + F ++ E+ LLK + +
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN- 102
Query: 473 ADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
++ L D F L ++V ++ +L + F+ ++Q +
Sbjct: 103 -----VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME--------FSEEKIQYL 149
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q L+ L+Y+HS G++H DLKP N+ + + CE+KI+D G + + YV +R Y
Sbjct: 150 VYQMLKGLKYIHSAGVVHRDLKPGNLAVN--EDCELKILDFGLARHADAEMTGYVVTRWY 207
Query: 587 RAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
RAPEVI+ + Y+Q +D+WS+GCI+AE+ TG+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 110/218 (50%), Gaps = 29/218 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K A T
Sbjct: 74 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-------AKLTD 120
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 178
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKV 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS--QVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS +KI+D G + + + YV +R
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 30 VPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 87
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 88 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 134
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 135 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 192
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 80
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 132
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 28/231 (12%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
++ + V +G F +V Q + +K+++N K + + E +LK + +
Sbjct: 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQND 91
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
D + + + + + F + +H+ ++ E L +LYE N +G F + +++ +
Sbjct: 92 DINNNNIV-KYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNG----FHIEDIKLYCIEI 146
Query: 531 LEALEYLHSLGIIHCDLKPENIL-----------------------IKSYQRCEIKIIDL 567
L+AL YL + + H DLKPENIL I + IK+ID
Sbjct: 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF 206
Query: 568 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
G + F++D + +R YRAPEVI+ L +D D+WS GC+LAEL+TG +
Sbjct: 207 GCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 74 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 120
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + Y
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGY 178
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+ G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILGFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMAGF 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKV 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS--QVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMAGF 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDXELKILDFGLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 80 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 126
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G + D + Y
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDSELKILDFGLARHTDDEMTGY 184
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKV 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS--QVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS +KI+D G + + + YV +R
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
YRAPEVI+G+ Y + +D+WS+G I+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 29/218 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 74 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 120
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D + +
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMAGF 178
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D +
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMTGX 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 83
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 84 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 130
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G + D + Y
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDSELKILDFGLARHTDDEMTGY 188
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 84
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 136
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 194
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +DLWS+GCI+ E+
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 81
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 133
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + +V +R
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMVPFVVTR 191
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 88
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 89 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 135
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G + D + Y
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDXELKILDFGLARHTDDEMTGY 193
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 125
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +DLWS+GCI+ E+
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 25 VPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 82
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 83 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 129
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G + D + Y
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDXELKILDFGLARHTDDEMTGY 187
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 82
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 83 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 129
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G + D + Y
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDXELKILDFGLARHTDDEMTGY 187
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 117
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 169
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 29/220 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG+ V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + E+KI+D G D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDSELKILDFGLCRHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 117
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 169
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS--QVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 80
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 132
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKV 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS--QVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS +KI+D G + + + YV +R
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
YRAPEVI+G+ Y + +D+WS+G I+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 80
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 132
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 29/219 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 97
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 98 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 144
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D G + D +
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTDDEMXGX 202
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEV 618
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 78
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 130
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 188
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 189 YYRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 125
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 73
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 125
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY--VQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + V +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPEVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
YRAPEVI+G+ Y + +D+WS+GCI+ E+ G V
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 72
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 124
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + YV +R
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----FDQSLDEIKLLKL 466
+ RY +GS A+ V A D TG V +K K + F ++ E++LLK
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKH 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHL------FIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + ++ L D F L ++V L+ A+L K + T
Sbjct: 78 MKHEN------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+Q + Q L L+Y+HS IIH DLKP N+ + + CE+KI+D + D + Y
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFYLARHTDDEMTGY 182
Query: 581 VQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVCL 620
V +R YRAPE+++ + Y+Q +D+WS+GCI+AEL TG
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKX 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--XQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q L +++LHS GIIH DLKP NI++KS +I L + + + YV +R Y
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
RAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--XQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q L +++LHS GIIH DLKP NI++KS +I L + + + YV +R Y
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
RAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 72
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--XQVIQMELDHE------RMSYL 124
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q L +++LHS GIIH DLKP NI++KS +I L + + + YV +R Y
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 184
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
RAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY--VQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + V +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +DLWS+GCI+ E+
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKX 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--XQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q L +++LHS GIIH DLKP NI++KS +I L + + + YV +R Y
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
RAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKC 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + ++IV EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY--VQSR 584
Q L +++LHS GIIH DLKP NI++KS C +KI+D G + + + V +R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
YRAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKL 466
+ RY + +GS A V A D +V +K K + F +Q+ E+ L+K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKX 79
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
VN + ++ + +++V EL+ ANL Q E E R+ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL--CQVIQMELDHE------RMSYL 131
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q L +++LHS GIIH DLKP NI++KS +I L + + + YV +R Y
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
RAPEVI+G+ Y + +D+WS+GCI+ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLV 467
T I + E LGS AFS+VF + TG LK IK F D SL +EI +LK +
Sbjct: 4 TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI 63
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY--------FT 519
+ I+ L D + H ++V +L+ SGGE + +T
Sbjct: 64 KHEN------IVTLEDIYESTTHYYLVMQLV-------------SGGELFDRILERGVYT 104
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENIL-IKSYQRCEIKIIDLGSSCFQTDN-L 577
++ +Q L A++YLH GI+H DLKPEN+L + + +I I D G S + + +
Sbjct: 105 EKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164
Query: 578 CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APEV+ PY + +D WS+G I L G
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRH 82
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 83 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 134
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 34/218 (15%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQS--LDEIKLLKLVNK 469
A RY + LG +F +V + +D T + +K+I K D S L E++LLK +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-- 78
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY--------FTLG 521
D +I++L++ +IV EL +GGE + F+
Sbjct: 79 ----DHPNIMKLFEILEDSSSFYIVGELY-------------TGGELFDEIIKRKRFSEH 121
Query: 522 RLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQTDN-LC 578
I +Q + Y+H I+H DLKPENIL++S ++ C+IKIID G S+CFQ + +
Sbjct: 122 DAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + Y APEV+ G YD+K D+WS G IL L +G
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 82
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 83 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 134
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 100
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 101 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 152
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 29 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 88
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 89 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 140
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 81 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 132
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 78
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 79 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 78
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 79 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 81 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 132
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 33/210 (15%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-------DEIKLLKLVNKNDPAD 474
+GS A+ V A D V +K K + F QSL E++LLK + +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPF--QSLIHARRTYRELRLLKHLKHEN--- 80
Query: 475 EHHILRLYDYFYH------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
++ L D F +++V L+ A+L K S +Q +
Sbjct: 81 ---VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH-------VQFLVY 130
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRA 588
Q L L+Y+HS GIIH DLKP N+ + + CE++I+D G + + + YV +R YRA
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVN--EDCELRILDFGLARQADEEMTGYVATRWYRA 188
Query: 589 PEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
PE+++ + Y+Q +D+WS+GCI+AEL G+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 85
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 86 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 137
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 27 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 86
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 87 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 18 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 77
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 78 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 129
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 85 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 85 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL-------YQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY +Y+G A+ V A D V +K I + + ++L EI++L
Sbjct: 41 VGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRH 100
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ ILR + ++IV +L+ +LY+ K Q S + L Q
Sbjct: 101 ENVIGIRDILRA-STLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL-------YQ 152
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+LI + C++KI D G + T L V +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINT--TCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 110
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 168
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 227
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 151
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 209
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 268
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 100
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 158
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 217
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 108
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 166
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 225
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 106
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 164
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 223
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V ++ I + + ++L EIK+L
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 85 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L YV +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 77
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 135
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 194
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
+ + RY LG +F +V +D TG + +K+I K Q D+ LL+ V
Sbjct: 44 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI--SKRQVKQKTDKESLLREVQ 101
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D +I++LY++F + ++V E+ Y + E F+ I R
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEV-----YTGGELFDEIISRKRFSEVDAARIIR 156
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQ-TDNLCLYVQSRS 585
Q L + Y+H I+H DLKPEN+L++S + I+IID G S+ F+ + + + +
Sbjct: 157 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 216
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ G YD+K D+WS G IL L +G
Sbjct: 217 YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
+ + RY LG +F +V +D TG + +K+I K Q D+ LL+ V
Sbjct: 45 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI--SKRQVKQKTDKESLLREVQ 102
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D +I++LY++F + ++V E+ Y + E F+ I R
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEV-----YTGGELFDEIISRKRFSEVDAARIIR 157
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQ-TDNLCLYVQSRS 585
Q L + Y+H I+H DLKPEN+L++S + I+IID G S+ F+ + + + +
Sbjct: 158 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 217
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ G YD+K D+WS G IL L +G
Sbjct: 218 YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 247
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 85
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 143
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 202
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 18/210 (8%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQS--LDEIKLLKLVNK 469
A RY + LG +F +V + +D T + +K+I K D S L E++LLK +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-- 78
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
D +I++L++ +IV EL Y + E F+ I +Q
Sbjct: 79 ----DHPNIMKLFEILEDSSSFYIVGEL-----YTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQTDN-LCLYVQSRSY 586
+ Y+H I+H DLKPENIL++S ++ C+IKIID G S+CFQ + + + + Y
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
APEV+ G YD+K D+WS G IL L +G
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 18/210 (8%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQS--LDEIKLLKLVNK 469
A RY + LG +F +V + +D T + +K+I K D S L E++LLK +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-- 78
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
D +I++L++ +IV EL Y + E F+ I +Q
Sbjct: 79 ----DHPNIMKLFEILEDSSSFYIVGEL-----YTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQTDN-LCLYVQSRSY 586
+ Y+H I+H DLKPENIL++S ++ C+IKIID G S+CFQ + + + + Y
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
APEV+ G YD+K D+WS G IL L +G
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
+ + RY LG +F +V +D TG + +K+I K Q D+ LL+ V
Sbjct: 21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI--SKRQVKQKTDKESLLREVQ 78
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D +I++LY++F + ++V E+ Y + E F+ I R
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEV-----YTGGELFDEIISRKRFSEVDAARIIR 133
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQ-TDNLCLYVQSRS 585
Q L + Y+H I+H DLKPEN+L++S + I+IID G S+ F+ + + + +
Sbjct: 134 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ G YD+K D+WS G IL L +G
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 33/212 (15%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-------DEIKLLKLVNKNDPAD 474
+GS A+ V A D V +K K + F QSL E++LLK + +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPF--QSLIHARRTYRELRLLKHLKHEN--- 88
Query: 475 EHHILRLYDYFYH------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
++ L D F +++V L+ A+L K +Q E +Q +
Sbjct: 89 ---VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK-SQALSDE------HVQFLVY 138
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRA 588
Q L L+Y+HS GIIH DLKP N+ + + E++I+D G + + + YV +R YRA
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 589 PEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
PE+++ + Y+Q +D+WS+GCI+AEL G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFD-QSLDEIKLLKLVNK 469
I+ + + LG A+ V A TG V +K I+ DK F ++L EIK+LK
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ +I R D F + ++I+ EL++ +L+ S +Q Q
Sbjct: 69 ENIITIFNIQRP-DSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-------IQYFIYQ 120
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-------------QTDN 576
L A++ LH +IH DLKP N+LI S C++K+ D G + Q
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 577 LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELW 614
+ YV +R YRAPEV++ Y + +D+WS GCILAEL+
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 29/217 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS----LDEIKLLKLV 467
++ RY + LGS A+ +V +D TG + +KIIK + LDE+ +LK +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQESGGEAYFTLGR 522
D +I++LY++F + ++V E+ R + QKF++
Sbjct: 62 ------DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-------- 107
Query: 523 LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQT-DNLCL 579
VI +Q L YLH I+H DLKPEN+L++S R IKI+D G S+ F+ +
Sbjct: 108 --VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 165
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + Y APEV+ YD+K D+WS G IL L G
Sbjct: 166 RLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDP 472
Y + LGS A+ +V +D T V+ +KII+ + L+E+ +LKL+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL----- 93
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQESGGEAYFTLGRLQVIT 527
D +I++LYD+F + ++V E + + KFN+ VI
Sbjct: 94 -DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA----------VII 142
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQTD-NLCLYVQSR 584
+Q L + YLH I+H DLKPEN+L++S ++ IKI+D G S+ F+ + + +
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTA 202
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ YD+K D+WS+G IL L G
Sbjct: 203 YYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 24/209 (11%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPADEHH 477
E LG+ ++ V++ + TGV V LK +K D + S + EI L+K + +
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN------ 64
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL 537
I+RLYD + L +V E + +L ++ L ++ Q L+ L +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLG--------SSCFQTDNLCLYVQSRSYRAP 589
H I+H DLKP+N+LI +R ++K+ D G + F ++ + L+ YRAP
Sbjct: 125 HENKILHRDLKPQNLLIN--KRGQLKLGDFGLARAFGIPVNTFSSEVVTLW-----YRAP 177
Query: 590 EVIIG-LPYDQKIDLWSLGCILAELWTGE 617
+V++G Y ID+WS GCILAE+ TG+
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRH 82
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 83 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 134
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNT--TSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRH 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 85 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 33/212 (15%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-------DEIKLLKLVNKNDPAD 474
+GS A+ V A D V +K K + F QSL E++LLK + +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPF--QSLIHARRTYRELRLLKHLKHEN--- 88
Query: 475 EHHILRLYDYFY------HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
++ L D F +++V L+ A+L K S +Q +
Sbjct: 89 ---VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH-------VQFLVY 138
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRA 588
Q L L+Y+HS GIIH DLKP N+ + + E++I+D G + + + YV +R YRA
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 589 PEVIIG-LPYDQKIDLWSLGCILAELWTGEVC 619
PE+++ + Y+Q +D+WS+GCI+AEL G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 29/217 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS----LDEIKLLKLV 467
++ RY + LGS A+ +V +D TG + +KIIK + LDE+ +LK +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQESGGEAYFTLGR 522
D +I++LY++F + ++V E+ R + QKF++
Sbjct: 79 ------DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-------- 124
Query: 523 LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQT-DNLCL 579
VI +Q L YLH I+H DLKPEN+L++S R IKI+D G S+ F+ +
Sbjct: 125 --VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + Y APEV+ YD+K D+WS G IL L G
Sbjct: 183 RLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
+ + RY LG +F +V +D TG + +K+I K Q D+ LL+ V
Sbjct: 27 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI--SKRQVKQKTDKESLLREVQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D +I++LY++F + ++V E+ Y + E F+ I R
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEV-----YTGGELFDEIISRKRFSEVDAARIIR 139
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQ-TDNLCLYVQSRS 585
Q L + Y+H I+H DLKPEN+L++S + I+IID G S+ F+ + + + +
Sbjct: 140 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 199
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ G YD+K D+WS G IL L +G
Sbjct: 200 YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 85 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L V +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 85
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 86 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 137
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + C++KI D G + T L V +
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 100
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ +++V L+ A+LY+ K S + L Q
Sbjct: 101 ENIIGINDIIRA-PTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL-------YQ 152
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 81 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 132
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYH------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY + +L +V + + +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 81 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 132
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 81 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 132
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 106
Query: 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 164
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 223
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFD-QSLDEIKLLKLVNK 469
I+ + + LG A+ V A TG V +K I+ DK F ++L EIK+LK
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ +I R D F + ++I+ EL++ +L+ S +Q Q
Sbjct: 69 ENIITIFNIQR-PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-------IQYFIYQ 120
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-------------QTDN 576
L A++ LH +IH DLKP N+LI S C++K+ D G + Q
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 577 LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELW 614
+ +V +R YRAPEV++ Y + +D+WS GCILAEL+
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
+ RY Y+G A+ V A D V V +K I + + ++L EIK+L
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ + I+R ++ ++IV +L+ +LY+ K S + L Q
Sbjct: 85 ENIIGINDIIRA-PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L L+Y+HS ++H DLKP N+L+ + ++KI D G + T L YV +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+++ Y + ID+WS+GCILAE+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-----NDKDFFDQS-LDEIKLLKL 466
A RY ++LG F+ V++A+D +T V +K IK KD +++ L EIKLL+
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
++ + I+ L D F H ++ +V + + +L K N T ++
Sbjct: 69 LSHPN------IIGLLDAFGHKSNISLVFDFMETDLEVIIKDN-----SLVLTPSHIKAY 117
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLY--VQS 583
L+ LEYLH I+H DLKP N+L+ + +K+ D G + F + N V +
Sbjct: 118 MLMTLQGLEYLHQHWILHRDLKPNNLLLD--ENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
R YRAPE++ G Y +D+W++GCILAEL
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 84
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 142
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 84
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 142
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 80
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 197
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 91
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 149
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 208
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + K F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 76
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 134
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 53/246 (21%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
+ +Y + + LG+ +F V + D+ +G LK + D + ++ LD +K+L VN
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVN---- 61
Query: 473 ADEHHILRLYDYFYHL--------------------------------------EHLFIV 494
I++L DYFY ++L ++
Sbjct: 62 -----IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 495 CELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 554
E + L++ K SG L + + Q A+ ++HSLGI H D+KP+N+L+
Sbjct: 117 MEYVPDTLHKVLKSFIRSGRSIPMNL--ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 555 KSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILA 611
S +K+ D GS+ ++ + SR YRAPE+++G Y IDLWS+GC+
Sbjct: 175 NSKDNT-LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 612 ELWTGE 617
EL G+
Sbjct: 234 ELILGK 239
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + K F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + Y+ SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 73
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 131
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + K F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + A +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y T+ +G+ +F V+QA+ +G V +K + DK F ++ L ++ L D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL---------DH 72
Query: 476 HHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+I+RL +FY +L +V + + +Y + S + + +++ Q
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQ 130
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYR 587
+L Y+HS GI H D+KP+N+L+ +K+ D GS+ + + + SR YR
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 588 APEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
APE+I G Y ID+WS GC+LAEL G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 23/202 (11%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG AF KV++AQ+ T V K+I K++++ D + EI +L D +I+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA------SCDHPNIV 97
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
+L D FY+ +L+I+ E + E T ++QV+ +Q L+AL YLH
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHD 153
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL---YVQSRSYRAPEVII--- 593
IIH DLK NIL +IK+ D G S T + ++ + + APEV++
Sbjct: 154 NKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 594 --GLPYDQKIDLWSLGCILAEL 613
PYD K D+WSLG L E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFD-QSLDEIKLLKLVNK 469
I+ + + LG A+ V A TG V +K I+ DK F ++L EIK+LK
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ +I R D F + ++I+ EL++ +L+ S +Q Q
Sbjct: 69 ENIITIFNIQR-PDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-------IQYFIYQ 120
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-------------QTDN 576
L A++ LH +IH DLKP N+LI S C++K+ D G + Q
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 577 LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELW 614
+ V +R YRAPEV++ Y + +D+WS GCILAEL+
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 23/202 (11%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG AF KV++AQ+ T V K+I K++++ D + EI +L D +I+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA------SCDHPNIV 97
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
+L D FY+ +L+I+ E + E T ++QV+ +Q L+AL YLH
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHD 153
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAPEVII--- 593
IIH DLK NIL +IK+ D G S T + ++ + + APEV++
Sbjct: 154 NKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 594 --GLPYDQKIDLWSLGCILAEL 613
PYD K D+WSLG L E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 65
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 66 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 119
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKPEN+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 120 FCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
LG AF KV++A++ TG K+I+ ++ + + EI++L D +I++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT------CDHPYIVK 80
Query: 481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
L +YH L+I+ E + + G T ++QV+ RQ LEAL +LHS
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSK 136
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL---YVQSRSYRAPEVII---- 593
IIH DLK N+L+ +I++ D G S L ++ + + APEV++
Sbjct: 137 RIIHRDLKAGNVLMT--LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 594 -GLPYDQKIDLWSLGCILAEL 613
PYD K D+WSLG L E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 66
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 67 --IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 120
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKPEN+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 121 FCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
+ + RY LG +F +V +D TG + +K+I K Q D+ LL+ V
Sbjct: 21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI--SKRQVKQKTDKESLLREVQ 78
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D +I +LY++F + ++V E+ Y + E F+ I R
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEV-----YTGGELFDEIISRKRFSEVDAARIIR 133
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLG-SSCFQTDNLCL-YVQSRS 585
Q L + Y H I+H DLKPEN+L++S + I+IID G S+ F+ + +
Sbjct: 134 QVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY 193
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ G YD+K D+WS G IL L +G
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 64
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 65 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 118
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKPEN+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 119 FCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 23/202 (11%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG AF KV++AQ+ T V K+I K++++ D + EI +L D +I+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA------SCDHPNIV 97
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
+L D FY+ +L+I+ E + E T ++QV+ +Q L+AL YLH
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHD 153
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL---YVQSRSYRAPEVII--- 593
IIH DLK NIL +IK+ D G S T + ++ + + APEV++
Sbjct: 154 NKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 594 --GLPYDQKIDLWSLGCILAEL 613
PYD K D+WSLG L E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 64
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 65 --IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 118
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKPEN+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 119 FCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
LG AF KV++A++ TG K+I+ ++ + + EI++L D +I++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT------CDHPYIVK 72
Query: 481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
L +YH L+I+ E + + G T ++QV+ RQ LEAL +LHS
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSK 128
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL---YVQSRSYRAPEVII---- 593
IIH DLK N+L+ +I++ D G S L ++ + + APEV++
Sbjct: 129 RIIHRDLKAGNVLMT--LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 594 -GLPYDQKIDLWSLGCILAEL 613
PYD K D+WSLG L E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKPEN+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 70
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 71 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 124
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 125 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY +G A+ V++A+D H+G V LK ++ + ++ + L+ + + +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQE------SGGEAYFTLGRL 523
+++RL D VC R + F+ +Q+ +
Sbjct: 65 HPNVVRLMD----------VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 114
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY--V 581
+ + RQ L L++LH+ I+H DLKPENIL+ S +K+ D G + + + L+ V
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALFPVV 172
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
+ YRAPEV++ Y +D+WS+GCI AE++
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 70
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 71 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 124
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 125 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 65
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 66 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 119
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 66
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 67 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 120
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 67
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 68 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 121
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 122 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 67
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 68 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 121
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 122 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 179
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 65
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 66 --IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG----IPLPLIKSYLFQLLQGLA 119
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 66
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 67 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 120
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 65
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 66 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 119
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 120 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 66
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 67 --IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG----IPLPLIKSYLFQLLQGLA 120
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 63 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 116
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 64
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 65 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 118
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLS 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 64
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 65 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 118
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 64
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 65 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 118
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 119 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 63 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 116
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 63 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 116
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 63 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 116
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 66
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L F + +G L ++ Q L+ L
Sbjct: 67 --IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG----IPLPLIKSYLFQLLQGLA 120
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY +G A+ V++A+D H+G V LK ++ + ++ + L+ + + +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQE------SGGEAYFTLGRL 523
+++RL D VC R + F+ +Q+ +
Sbjct: 65 HPNVVRLMD----------VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 114
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YV 581
+ + RQ L L++LH+ I+H DLKPENIL+ S +K+ D G + + + L V
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALDPVV 172
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
+ YRAPEV++ Y +D+WS+GCI AE++
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY +G A+ V++A+D H+G V LK ++ + ++ + L+ + + +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQE------SGGEAYFTLGRL 523
+++RL D VC R + F+ +Q+ +
Sbjct: 65 HPNVVRLMD----------VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 114
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YV 581
+ + RQ L L++LH+ I+H DLKPENIL+ S +K+ D G + + + L V
Sbjct: 115 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALAPVV 172
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
+ YRAPEV++ Y +D+WS+GCI AE++
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + +G+ +F VFQA+ + + +V +K + DK F ++ L ++++K N
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKRFKNRELQIMRIVKHPN------- 93
Query: 476 HHILRLYDYFY----HLEHLFI--VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
++ L +FY + +F+ V E + +Y + + L +L + Q
Sbjct: 94 --VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY--Q 149
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQS 583
L +L Y+HS+GI H D+KP+N+L+ +K+ID GS+ +C S
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGV-LKLIDFGSAKILIAGEPNVSXIC----S 204
Query: 584 RSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
R YRAPE+I G Y ID+WS GC++AEL G+
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 32/203 (15%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPADEHH 477
E LG+ AFS+V A++ TG +K I K K +EI +L+ + +
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK------HEN 81
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE--------AYFTLGRLQVITRQ 529
I+ L D + HL++V +L+ SGGE ++T + RQ
Sbjct: 82 IVALEDIYESPNHLYLVMQLV-------------SGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSY-QRCEIKIIDLGSSCFQ--TDNLCLYVQSRSY 586
L+A+ YLH +GI+H DLKPEN+L S + +I I D G S + D + + Y
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGY 188
Query: 587 RAPEVIIGLPYDQKIDLWSLGCI 609
APEV+ PY + +D WS+G I
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 28/223 (12%)
Query: 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLL 464
L ++ RY +G A+ V++A+D H+G V LK ++ + ++ +
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQE------SG 513
L+ + + + +++RL D VC R + F+ +Q+
Sbjct: 63 ALLRRLEAFEHPNVVRLMD----------VCATSRTDREIKVTLVFEHVDQDLRTYLDKA 112
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573
++ + RQ L L++LH+ I+H DLKPENIL+ S +K+ D G +
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLARIY 170
Query: 574 TDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
+ + L V + YRAPEV++ Y +D+WS+GCI AE++
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V L I+ D + ++ EI LLK +N +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN---- 63
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 64 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V L I+ D + ++ EI LLK +N +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN---- 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E L +L +F + +G L ++ Q L+ L
Sbjct: 63 --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 116
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 66
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E + +L +F + +G L ++ Q L+ L
Sbjct: 67 --IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLA 120
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADE 475
E +G + V++A++ TG V LK I+ D + ++ EI LLK +N +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN---- 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I++L D + L++V E + +L F + +G L ++ Q L+ L
Sbjct: 63 --IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG----IPLPLIKSYLFQLLQGLA 116
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVI 592
+ HS ++H DLKP+N+LI + IK+ D G + + Y V + YRAPE++
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 593 IGLP-YDQKIDLWSLGCILAELWT 615
+G Y +D+WSLGCI AE+ T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 152
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + D+LC + Y PE+I G
Sbjct: 153 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGR 207
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
+Y +G A+ KVF+A+DL G V LK ++ L I+ + ++ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 474 DEHHILRLYDYFY-----HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
+ +++RL+D L +V E + +L + E G ++ +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG----VPTETIKDMMF 127
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--YVQSRSY 586
Q L L++LHS ++H DLKP+NIL+ S +IK+ D G + + + L V + Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELW 614
RAPEV++ Y +DLWS+GCI AE++
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 127
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ-TDNLCLYVQSRSYRAPEVIIGLPYD 598
+IH D+KPEN+L+ S E+KI D G SC + + Y PE+I G +D
Sbjct: 128 KRVIHRDIKPENLLLGSA--GELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 599 QKIDLWSLGCILAELWTGE 617
+K+DLWSLG + E G+
Sbjct: 186 EKVDLWSLGVLCYEFLVGK 204
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
+Y +G A+ KVF+A+DL G V LK ++ L I+ + ++ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQE------SGGEAYFTLGR 522
+ +++RL+D VC + R + F+ +Q+ E
Sbjct: 72 EHPNVVRLFD----------VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 523 LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
++ + Q L L++LHS ++H DLKP+NIL+ S +IK+ D G + + + L
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMALTSV 179
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
V + YRAPEV++ Y +DLWS+GCI AE++
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
+Y +G A+ KVF+A+DL G V LK ++ L I+ + ++ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQE------SGGEAYFTLGR 522
+ +++RL+D VC + R + F+ +Q+ E
Sbjct: 72 EHPNVVRLFD----------VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 523 LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
++ + Q L L++LHS ++H DLKP+NIL+ S +IK+ D G + + + L
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMALTSV 179
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
V + YRAPEV++ Y +DLWS+GCI AE++
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 112/248 (45%), Gaps = 68/248 (27%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLL- 464
+ +Y + + LG A+ V+++ D TG V +K I D F S D EI +L
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF---DAFQNSTDAQRTFREIMILT 63
Query: 465 ---------KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYE-FQKFNQESGG 514
L+N ++ + ++DY H I RAN+ E K
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI-----RANILEPVHK------- 111
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCF- 572
Q + Q ++ ++YLHS G++H D+KP NIL+ + C +K+ D G S F
Sbjct: 112 ---------QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA--ECHVKVADFGLSRSFV 160
Query: 573 ----QTDNLCL------------------YVQSRSYRAPEVIIG-LPYDQKIDLWSLGCI 609
T+N+ L YV +R YRAPE+++G Y + ID+WSLGCI
Sbjct: 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220
Query: 610 LAELWTGE 617
L E+ G+
Sbjct: 221 LGEILCGK 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSR-------FDEQRTATYITELANALSYCHS 130
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + D LC + Y PE+I G
Sbjct: 131 KRVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGR 185
Query: 596 PYDQKIDLWSLGCILAELWTG 616
+D+K+DLWSLG + E G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 127
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + D LC + Y PE+I G
Sbjct: 128 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGR 182
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFXE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + D+LC + Y PE+I G
Sbjct: 130 KRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGR 184
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E R +Y E QK ++ F R + AL Y HS
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSK-------FDEQRTATYITELANALSYCHS 131
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 132 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 186
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG +FS + + +KII + Q EI LKL + +I++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK--EITALKLCEGHP-----NIVKL 71
Query: 482 YDYFYHLEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
++ F+ H F+V ELL L+E K + +F+ I R+ + A+ ++H +
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIK------KKKHFSETEASYIMRKLVSAVSHMHDV 125
Query: 541 GIIHCDLKPENILIKSYQ-RCEIKIIDLGSSCFQ-TDNLCLYVQ--SRSYRAPEVIIGLP 596
G++H DLKPEN+L EIKIID G + + DN L + Y APE++
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 597 YDQKIDLWSLGCILAELWTGEV 618
YD+ DLWSLG IL + +G+V
Sbjct: 186 YDESCDLWSLGVILYTMLSGQV 207
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKE 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGLAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E R +Y E QK ++ F R + AL Y HS
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSK-------FDEQRTATYITELANALSYCHS 131
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ-SRSYRAPEVIIGLPYD 598
+IH D+KPEN+L+ S E+KI D G S + + + Y PE+I G +D
Sbjct: 132 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHD 189
Query: 599 QKIDLWSLGCILAELWTGE 617
+K+DLWSLG + E G+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNK 469
G Y + E LG +F KV A T V LK I D + EI LKL+
Sbjct: 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR- 67
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEF---QKFNQESGGEAYFTLGRLQVI 526
HI++LYD + +V E L+++ +K E G +F
Sbjct: 68 -----HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFF-------- 114
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ--SR 584
+Q + A+EY H I+H DLKPEN+L+ +KI D G S TD L S
Sbjct: 115 -QQIICAIEYCHRHKIVHRDLKPENLLLDD--NLNVKIADFGLSNIMTDGNFLKTSCGSP 171
Query: 585 SYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+Y APEVI G Y ++D+WS G +L + G +
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRL 206
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + + F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + + F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFXE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + + F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + +G+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ IK+ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNK 469
G Y + + LG +F KV A TG V LKII D + EI L+L+
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR- 72
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEF-QKFNQESGGEAYFTLGRLQVITR 528
HI++LYD + + +V E L+++ + ++ S EA + +
Sbjct: 73 -----HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA-------RRFFQ 120
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ--SRSY 586
Q + A+EY H I+H DLKPEN+L+ + +KI D G S TD L S +Y
Sbjct: 121 QIISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNY 178
Query: 587 RAPEVIIGLPY-DQKIDLWSLGCIL 610
APEVI G Y ++D+WS G IL
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNK 469
G Y + + LG +F KV A TG V LKII D + EI L+L+
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR- 71
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEF-QKFNQESGGEAYFTLGRLQVITR 528
HI++LYD + + +V E L+++ + ++ S EA + +
Sbjct: 72 -----HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA-------RRFFQ 119
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ--SRSY 586
Q + A+EY H I+H DLKPEN+L+ + +KI D G S TD L S +Y
Sbjct: 120 QIISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNY 177
Query: 587 RAPEVIIGLPY-DQKIDLWSLGCIL 610
APEVI G Y ++D+WS G IL
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 24/198 (12%)
Query: 427 FSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484
F KV++AQ+ T V K+I K++++ D + EI +L D +I++L D
Sbjct: 23 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILA------SCDHPNIVKLLDA 75
Query: 485 FYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIH 544
FY+ +L+I+ E + E T ++QV+ +Q L+AL YLH IIH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 545 CDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL----YVQSRSYRAPEVII-----GL 595
DLK NIL +IK+ D G S T ++ + + APEV++
Sbjct: 132 RDLKAGNILFT--LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 596 PYDQKIDLWSLGCILAEL 613
PYD K D+WSLG L E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWTL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNK 469
G Y + + LG +F KV A TG V LKII D + EI L+L+
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR- 66
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEF-QKFNQESGGEAYFTLGRLQVITR 528
HI++LYD + + +V E L+++ + ++ S EA + +
Sbjct: 67 -----HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA-------RRFFQ 114
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ--SRSY 586
Q + A+EY H I+H DLKPEN+L+ + +KI D G S TD L S +Y
Sbjct: 115 QIISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNY 172
Query: 587 RAPEVIIGLPY-DQKIDLWSLGCIL 610
APEVI G Y ++D+WS G IL
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFXE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFXE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFXE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 152
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 153 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 207
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF----FDQSLDEIKLLKLVNKND 471
+ + LG+ +F +V + H G +K++K + + + DE +L +V
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--- 64
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ-- 529
I+R++ F + +F++ + + GGE + L + Q
Sbjct: 65 ---HPFIIRMWGTFQDAQQIFMIMDYI-------------EGGELFSLLRKSQRFPNPVA 108
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ 582
CL ALEYLHS II+ DLKPENIL+ + IKI D G + + D
Sbjct: 109 KFYAAEVCL-ALEYLHSKDIIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVTYXLCG 165
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APEV+ PY++ ID WS G ++ E+ G
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNK 469
G Y + + LG +F KV A TG V LKII D + EI L+L+
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR- 62
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEF-QKFNQESGGEAYFTLGRLQVITR 528
HI++LYD + + +V E L+++ + ++ S EA + +
Sbjct: 63 -----HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA-------RRFFQ 110
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ--SRSY 586
Q + A+EY H I+H DLKPEN+L+ + +KI D G S TD L S +Y
Sbjct: 111 QIISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPNY 168
Query: 587 RAPEVIIGLPY-DQKIDLWSLGCIL 610
APEVI G Y ++D+WS G IL
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 143
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 144 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 198
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 35/219 (15%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKN 470
G Y + + +G F+KV A+ + TG +V +KII + + E++++K++N
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILN-- 72
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL---- 523
+I++L++ + L++V E SGGE + L GR+
Sbjct: 73 ----HPNIVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGRMKEKE 115
Query: 524 -QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LCLY 580
+ RQ + A++Y H I+H DLK EN+L+ IKI D G S+ F N L +
Sbjct: 116 ARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG--DMNIKIADFGFSNEFTVGNKLDTF 173
Query: 581 VQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ IK+ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKE 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--APGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID--QQGYIQVTDFGLAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + + TG +KI LD+ K++KL
Sbjct: 22 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 70
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 71 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 126
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 127 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWTL 184
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK--IIKNDKDFFD-QSLDEIKLLKLVNK 469
+Y +G F +VF+A+ TG V LK +++N+K+ F +L EIK+L+L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 470 NDPADEHHILRLYDYFYH-----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
+ + I R Y+ + +F CE A L S FTL ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL--------SNVLVKFTLSEIK 128
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCF------QTDNL 577
+ + L L Y+H I+H D+K N+LI + +K+ D G + F Q +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 578 CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWT 615
V + YR PE+++G Y IDLW GCI+AE+WT
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V +KII DK + S E++++K++N
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLN 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL-- 523
+I++L++ + L++V E SGGE + L GR+
Sbjct: 72 ------HPNIVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGRMKE 112
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLD 170
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V +KII DK + S E++++K++N
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLN 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL-- 523
+I++L++ + L++V E SGGE + L GR+
Sbjct: 72 ------HPNIVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGRMKE 112
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLD 170
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 131
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + +LC + Y PE+I G
Sbjct: 132 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLC---GTLDYLPPEMIEGR 186
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 131
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 132 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 186
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 127
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + +LC + Y PE+I G
Sbjct: 128 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLC---GTLDYLPPEMIEGR 182
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 130
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 131 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 185
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSR-------FDEQRTATYITELANALSYCHS 130
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 131 KRVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 185
Query: 596 PYDQKIDLWSLGCILAELWTG 616
+D+K+DLWSLG + E G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + +G+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GG+ + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYM--PGGDMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ IK+ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + +G+ +F +V + + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GG+ + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYM--PGGDMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ IK+ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 130 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 184
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + +LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + +LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ-TDNLCLYVQSRSYRAPEVIIGLPYD 598
+IH D+KPEN+L+ S E+KI D G S + + Y PE+I G +D
Sbjct: 130 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHD 187
Query: 599 QKIDLWSLGCILAELWTGE 617
+K+DLWSLG + E G+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 131
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE I G
Sbjct: 132 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEXIEGR 186
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTELC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + LG +S+VF+A ++ V +KI+K K ++ EIK+L+ + + P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENL-RGGP--- 92
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGR--LQVITRQCLEA 533
+I+ L D + + R F+ N + Y TL ++ + L+A
Sbjct: 93 -NIITLAD--------IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKA 143
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSYRAPEV 591
L+Y HS+GI+H D+KP N++I R ++++ID G + F + V SR ++ PE+
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 592 IIGLP-YDQKIDLWSLGCILAEL 613
++ YD +D+WSLGC+LA +
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASM 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 130 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 184
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 125
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 126 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 180
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V ++II DK + S E++++K++N
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLN 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL-- 523
+I++L++ + L++V E SGGE + L GR+
Sbjct: 72 ------HPNIVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGRMKE 112
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLD 170
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 128
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 129 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGR 183
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK--IIKNDKDFFD-QSLDEIKLLKLVNK 469
+Y +G F +VF+A+ TG V LK +++N+K+ F +L EIK+L+L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 470 NDPADEHHILRLYDYFYH-----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
+ + I R Y+ + +F CE A L S FTL ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL--------SNVLVKFTLSEIK 128
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCF------QTDNL 577
+ + L L Y+H I+H D+K N+LI + +K+ D G + F Q +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 578 CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWT 615
V + YR PE+++G Y IDLW GCI+AE+WT
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V +KII DK + S E++++K++N
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLN 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL-- 523
+I++L++ + L++V E SGGE + L GR+
Sbjct: 72 ------HPNIVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGRMKE 112
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLD 170
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ + Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK--IIKNDKDFFD-QSLDEIKLLKLVNK 469
+Y +G F +VF+A+ TG V LK +++N+K+ F +L EIK+L+L+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 470 NDPADEHHILRLYDYFYH-----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
+ + I R Y+ + +F CE A L S FTL ++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL--------SNVLVKFTLSEIK 127
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCF------QTDNL 577
+ + L L Y+H I+H D+K N+LI + +K+ D G + F Q +
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 578 CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWT 615
V + YR PE+++G Y IDLW GCI+AE+WT
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK--IIKNDKDFFD-QSLDEIKLLKLVNK 469
+Y +G F +VF+A+ TG V LK +++N+K+ F +L EIK+L+L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 470 NDPADEHHILRLYDYFYH-----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
+ + I R Y+ + +F CE A L S FTL ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL--------SNVLVKFTLSEIK 128
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCF------QTDNL 577
+ + L L Y+H I+H D+K N+LI + +K+ D G + F Q +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 578 CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWT 615
V + YR PE+++G Y IDLW GCI+AE+WT
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 57 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 105
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 161
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 219
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V +KII K D +L+ EI++LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 72 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 119
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V +KII K D +L+ EI++LK
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 78 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 125
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 127 KRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTXLC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 30/220 (13%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
V G Y + + LG F KV + TG V +KI+ K +SLD + +K +N
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQN 64
Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL--- 523
H HI++LY F+V E + SGGE + + GR+
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYV-------------SGGELFDYICKHGRVEEM 111
Query: 524 --QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
+ + +Q L A++Y H ++H DLKPEN+L+ ++ KI D G S +D L
Sbjct: 112 EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRT 169
Query: 582 Q--SRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
S +Y APEVI G Y ++D+WS G IL L G +
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 130 KRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGR 184
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V +KII K D +L+ EI++LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 72 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 119
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 77
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 78 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFXE 133
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 134 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 191
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V +KII K D +L+ EI++LK
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 71 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 118
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ ++ + LK++ K +++ E +L + V +ILRL
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 126
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 127 KKVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAALC---GTLDYLPPEMIEGR 181
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V +KII K D +L+ EI++LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 72 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 119
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 77
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 78 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VPGGEMFSHLRRIGRFSE 133
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 134 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 191
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRL--YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL--- 523
+E IL+ + + LE+ F +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKD----NSNLYMVMEY--VPGGEMFSHLRRIGRF 138
Query: 524 -----QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTW 196
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHIL 479
LGS AF V ++ +G++ +K I D+ +Q EI++LK + D +I+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL------DHPNII 83
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
++++ F +++IV E + + ++ G+A + G + + +Q + AL Y HS
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVAELMKQMMNALAYFHS 142
Query: 540 LGIIHCDLKPENILIK-SYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS-YRAPEVIIGLP 596
++H DLKPENIL + + IKIID G + F++D + Y APEV
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRD 201
Query: 597 YDQKIDLWSLGCILAELWTGEVCL 620
K D+WS G ++ L TG CL
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG--CL 223
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRL--YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL--- 523
+E IL+ + + LE+ F +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKD----NSNLYMVMEY--VPGGEMFSHLRRIGRF 138
Query: 524 -----QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTW 196
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRL--YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL--- 523
+E IL+ + + LE+ F +NLY ++ GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKD----NSNLYMVMEY--VPGGEMFSHLRRIGRF 138
Query: 524 -----QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTW 196
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 32/214 (14%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLK-IIKNDKDFFDQSL-DEIKLLKLVNKNDPA 473
Y + LG+ AFS+V A+D T V +K I K + + S+ +EI +L + +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN-- 77
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE--------AYFTLGRLQV 525
I+ L D + HL+++ +L+ SGGE ++T
Sbjct: 78 ----IVALDDIYESGGHLYLIMQLV-------------SGGELFDRIVEKGFYTERDASR 120
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QRCEIKIIDLGSSCFQTDNLCLYVQ-- 582
+ Q L+A++YLH LGI+H DLKPEN+L S + +I I D G S + L
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APEV+ PY + +D WS+G I L G
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN++I Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+II Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V ++II DK + S E++++K++N
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLN 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL-- 523
+I++L++ + L++V E SGGE + L GR+
Sbjct: 72 ------HPNIVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGRMKE 112
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLD 170
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + LK++ K +++ E +L + V +ILRL
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 123
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI D G S + LC + Y PE+I G
Sbjct: 124 KRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 178
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGK 200
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 57 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 105
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFXE 161
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 219
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 128
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI + G S + LC + Y PE+I G
Sbjct: 129 KRVIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 183
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + + LK++ K +++ E +L + V +ILRL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 482 YDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y YF+ ++++ E L E QK ++ F R + AL Y HS
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FDEQRTATYITELANALSYCHS 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF----QTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ S E+KI + G S + LC + Y PE+I G
Sbjct: 130 KRVIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGR 184
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+D+K+DLWSLG + E G+
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 37 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 36/223 (16%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKL 466
V G Y + + LG F KV + TG V +KI+ K D + EI+ LKL
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL 523
HI++LY +F+V E + SGGE + + GRL
Sbjct: 73 FRHP------HIIKLYQVISTPSDIFMVMEYV-------------SGGELFDYICKNGRL 113
Query: 524 -----QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578
+ + +Q L ++Y H ++H DLKPEN+L+ ++ KI D G S +D
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEF 171
Query: 579 LYVQ--SRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
L S +Y APEVI G Y ++D+WS G IL L G +
Sbjct: 172 LRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFXE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + LG+ AFS+V A+D T V +K I + + E ++ L P
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP--- 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE--------AYFTLGRLQVIT 527
+I+ L D + HL+++ +L+ SGGE ++T +
Sbjct: 77 -NIVALDDIYESGGHLYLIMQLV-------------SGGELFDRIVEKGFYTERDASRLI 122
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSY-QRCEIKIIDLGSSCFQTDNLCLYVQ--SR 584
Q L+A++YLH LGI+H DLKPEN+L S + +I I D G S + L +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ PY + +D WS+G I L G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--------------NDKDFFDQS 457
I Y+ LGS A+ +V ++ + + +K+IK N + F ++
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY 517
+EI LLK D +I++L+D F ++ ++V E YE + ++
Sbjct: 94 YNEISLLK------SLDHPNIIKLFDVFEDKKYFYLVTEF-----YEGGELFEQIINRHK 142
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDN 576
F I +Q L + YLH I+H D+KPENIL+++ IKI+D G S F + +
Sbjct: 143 FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
Query: 577 LCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
L + + Y APEV + Y++K D+WS G I+ L G
Sbjct: 203 YKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFAE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFXE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + LG+ AFS+V A+D T V +K I + + E ++ L P
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP--- 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE--------AYFTLGRLQVIT 527
+I+ L D + HL+++ +L+ SGGE ++T +
Sbjct: 77 -NIVALDDIYESGGHLYLIMQLV-------------SGGELFDRIVEKGFYTERDASRLI 122
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSY-QRCEIKIIDLGSSCFQTDNLCLYVQ--SR 584
Q L+A++YLH LGI+H DLKPEN+L S + +I I D G S + L +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ PY + +D WS+G I L G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 30/220 (13%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
V G Y + + LG F KV + TG V +KI+ K +SLD + +K +N
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQN 64
Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL--- 523
H HI++LY F+V E + SGGE + + GR+
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYV-------------SGGELFDYICKHGRVEEM 111
Query: 524 --QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY- 580
+ + +Q L A++Y H ++H DLKPEN+L+ ++ KI D G S +D L
Sbjct: 112 EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRD 169
Query: 581 -VQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
S +Y APEVI G Y ++D+WS G IL L G +
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+E LG A++KV A L G + +KII K + E++ L N
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK----- 71
Query: 477 HILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+IL L ++F ++V E L+ L QK + +F + R AL
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQK-------QKHFNEREASRVVRDVAAAL 124
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCE-IKI--IDLGS------SC--FQTDNLCLYVQS 583
++LH+ GI H DLKPENIL +S ++ +KI DLGS SC T L S
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 584 RSYRAPEVI-----IGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ YD++ DLWSLG +L + +G
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 31 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 79
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 80 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFXE 135
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 136 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 193
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFXE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 57 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 105
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 161
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGATWTL 219
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + LG+ AFS+V A+D T V +K I + + E ++ L P
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP--- 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE--------AYFTLGRLQVIT 527
+I+ L D + HL+++ +L+ SGGE ++T +
Sbjct: 77 -NIVALDDIYESGGHLYLIMQLV-------------SGGELFDRIVEKGFYTERDASRLI 122
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSY-QRCEIKIIDLGSSCFQTDNLCLYVQ--SR 584
Q L+A++YLH LGI+H DLKPEN+L S + +I I D G S + L +
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y APEV+ PY + +D WS+G I L G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 34/213 (15%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLK-LVNKN 470
+Y E +G + VF+A++ T V LK ++ D D +L EI LLK L +KN
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYE-FQKFNQESGGEAYFTLGRLQVITRQ 529
I+RL+D + + L +V E +L + F N + E ++ Q
Sbjct: 63 -------IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI------VKSFLFQ 109
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--------CFQTDNLCLYV 581
L+ L + HS ++H DLKP+N+LI + E+K+ D G + C+ + + L+
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLIN--RNGELKLADFGLARAFGIPVRCYSAEVVTLW- 166
Query: 582 QSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
YR P+V+ G Y ID+WS GCI AEL
Sbjct: 167 ----YRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V ++II K D +L+ EI++LK
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 197 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 244
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 35/219 (15%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKN 470
G Y + + +G F+KV A+ + TG +V +KII + + E++++K++N
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-- 69
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL---- 523
+I++L++ + L+++ E SGGE + L GR+
Sbjct: 70 ----HPNIVKLFEVIETEKTLYLIMEY-------------ASGGEVFDYLVAHGRMKEKE 112
Query: 524 -QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT--DNLCLY 580
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S T L +
Sbjct: 113 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKLDTF 170
Query: 581 VQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 209
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 46/240 (19%)
Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
I N + Y + +G ++ V+ A D +T +V +K + F+ +D ++L+
Sbjct: 19 IKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILRE 75
Query: 467 VNKNDPADEHHILRLYDY-----FYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLG 521
+ + +I+RLYD + L+IV E+ ++L + K + T
Sbjct: 76 ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK------TPIFLTEE 129
Query: 522 RLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----- 576
++ I L ++H GIIH DLKP N L+ Q C +K+ D G + +T N
Sbjct: 130 HIKTILYNLLLGENFIHESGIIHRDLKPANCLLN--QDCSVKVCDFGLA--RTINSEKDT 185
Query: 577 ----------------------LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAEL 613
L +V +R YRAPE+I+ Y + ID+WS GCI AEL
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ LG+ +F +V + TG +KI LD+ K++KL
Sbjct: 37 NTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKI-----------LDKQKVVKLKQ 85
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E I + ++ + ++ F + +NLY ++ GGE + L R+
Sbjct: 86 IEHTLNEKRIQQAVNFPFLVKLEFSFKD--NSNLYMVLEY--APGGEMFSHLRRIGRFSE 141
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ IK+ D G +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVKGRTWXL 199
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKND 471
+Y+ E +G + V++AQ+ + G LK I K D+ ++ EI +LK + ++
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I++LYD + + L +V E L +L + + GG T + Q L
Sbjct: 62 ------IVKLYDVIHTKKRLVLVFEHLDQDLKKL--LDVCEGGLESVTAKSFLL---QLL 110
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDNLCLYVQSRSYRA 588
+ Y H ++H DLKP+N+LI + E+KI D G + V + YRA
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 589 PEVIIG-LPYDQKIDLWSLGCILAELWTG 616
P+V++G Y ID+WS+GCI AE+ G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKND 471
+Y+ E +G + V++AQ+ + G LK I K D+ ++ EI +LK + ++
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I++LYD + + L +V E L +L + + GG T + Q L
Sbjct: 62 ------IVKLYDVIHTKKRLVLVFEHLDQDLKKL--LDVCEGGLESVTAKSFLL---QLL 110
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDNLCLYVQSRSYRA 588
+ Y H ++H DLKP+N+LI + E+KI D G + V + YRA
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRA 168
Query: 589 PEVIIG-LPYDQKIDLWSLGCILAELWTG 616
P+V++G Y ID+WS+GCI AE+ G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF------DQSLD---EIKLLKL 466
Y +++ LGS A +V A + T V ++II K D +L+ EI++LK
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+N H + F+ E +IV EL+ + F++ G + ++
Sbjct: 211 LN-------HPCIIKIKNFFDAEDYYIVLELMEGG----ELFDKVVGNKR-LKEATCKLY 258
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCF--QTDNLCLYVQS 583
Q L A++YLH GIIH DLKPEN+L+ S + C IKI D G S +T + +
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 584 RSYRAPEVIIGL---PYDQKIDLWSLGCIL 610
+Y APEV++ + Y++ +D WSLG IL
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ ++ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 53/241 (21%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQD-LHTGVDVCLKIIKNDKDFFD--QSLDEIKLLKLVN 468
I RY + +G+ ++ V +A D L V KI++ +D D + L EI +L +N
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 469 KNDPADEHHILRLYDYFY-----HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL 523
+ H++++ D + L++V E+ + +F+K + Y T +
Sbjct: 111 HD------HVVKVLDIVIPKDVEKFDELYVVLEIADS---DFKKLFRTP---VYLTELHI 158
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS------------- 570
+ + L ++Y+HS GI+H DLKP N L+ Q C +K+ D G +
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVN--QDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 571 --CFQTDNLCL---------------YVQSRSYRAPEVI-IGLPYDQKIDLWSLGCILAE 612
+ D++ L +V +R YRAPE+I + Y + ID+WS+GCI AE
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 613 L 613
L
Sbjct: 277 L 277
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
R+ V G F V ++ TG+ V +K + D F ++ L ++ L ++
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL------- 76
Query: 475 EHH--ILRLYDYFYHLE-------HLFIVCELLRANLYEFQK--FNQESGGEAYFTLGRL 523
HH I++L YFY L +L +V E + L+ + + ++ +
Sbjct: 77 -HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL----I 131
Query: 524 QVITRQCLEALEYLH--SLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCL 579
+V Q + ++ LH S+ + H D+KP N+L+ +K+ D GS+ ++
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD-GTLKLCDFGSAKKLSPSEPNVA 190
Query: 580 YVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
Y+ SR YRAPE+I G Y +D+WS+GCI AE+ GE
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKND 471
+Y+ E +G + V++AQ+ + G LK I K D+ ++ EI +LK + ++
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I++LYD + + L +V E L +L + + GG T + Q L
Sbjct: 62 ------IVKLYDVIHTKKRLVLVFEHLDQDLKKL--LDVCEGGLESVTAKSFLL---QLL 110
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDNLCLYVQSRSYRA 588
+ Y H ++H DLKP+N+LI + E+KI D G + + + YRA
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168
Query: 589 PEVIIG-LPYDQKIDLWSLGCILAELWTG 616
P+V++G Y ID+WS+GCI AE+ G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478
+G ++ VF+ ++ TG V +K ++D +L EI++LK + + +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN------L 64
Query: 479 LRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL 537
+ L + F L +V E L+E ++ + G + ++ IT Q L+A+ +
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRY--QRGVPEHL----VKSITWQTLQAVNFC 118
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEVIIG 594
H IH D+KPENILI + IK+ D G + T Y V +R YR+PE+++G
Sbjct: 119 HKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 595 -LPYDQKIDLWSLGCILAELWTG 616
Y +D+W++GC+ AEL +G
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 25/229 (10%)
Query: 399 EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL 458
E NK+ P + + + + + LG +F KVF A+ T +K +K D D +
Sbjct: 2 ELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 61
Query: 459 D----EIKLLKLVNKNDPADEHHIL-RLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQE 511
+ E ++L L A EH L ++ F E+LF V E L +Y Q ++
Sbjct: 62 ECTMVEKRVLSL------AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK- 114
Query: 512 SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG--- 568
F L R + + L++LHS GI++ DLK +NIL+ + IKI D G
Sbjct: 115 ------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD--KDGHIKIADFGMCK 166
Query: 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + + Y APE+++G Y+ +D WS G +L E+ G+
Sbjct: 167 ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 35/219 (15%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKN 470
G Y + + +G F+KV A+ + TG +V +KII + + E++++K++N
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-- 72
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL---- 523
+I++L++ + L+++ E SGGE + L GR+
Sbjct: 73 ----HPNIVKLFEVIETEKTLYLIMEY-------------ASGGEVFDYLVAHGRMKEKE 115
Query: 524 -QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT--DNLCLY 580
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S T L +
Sbjct: 116 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKLDAF 173
Query: 581 VQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V +KII DK + S E++++K++N
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLN 64
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL-------- 520
+ I++L++ + L++V E SGGE + L
Sbjct: 65 HPN------IVKLFEVIETEKTLYLVMEY-------------ASGGEVFDYLVAHGWMKE 105
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 106 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLD 163
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ S Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 34/213 (15%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLK-LVNKN 470
+Y E +G + VF+A++ T V LK ++ D D +L EI LLK L +KN
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYE-FQKFNQESGGEAYFTLGRLQVITRQ 529
I+RL+D + + L +V E +L + F N + E ++ Q
Sbjct: 63 -------IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI------VKSFLFQ 109
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--------CFQTDNLCLYV 581
L+ L + HS ++H DLKP+N+LI + E+K+ + G + C+ + + L+
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLIN--RNGELKLANFGLARAFGIPVRCYSAEVVTLW- 166
Query: 582 QSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
YR P+V+ G Y ID+WS GCI AEL
Sbjct: 167 ----YRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 399 EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL 458
E NK+ P + + + + + LG +F KVF A+ T +K +K D D +
Sbjct: 3 ELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 62
Query: 459 D----EIKLLKLVNKNDPADEHHIL-RLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQE 511
+ E ++L L A EH L ++ F E+LF V E L +Y Q ++
Sbjct: 63 ECTMVEKRVLSL------AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK- 115
Query: 512 SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS-- 569
F L R + + L++LHS GI++ DLK +NIL+ + IKI D G
Sbjct: 116 ------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD--KDGHIKIADFGMCK 167
Query: 570 ----SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+T+ C + Y APE+++G Y+ +D WS G +L E+ G+
Sbjct: 168 ENMLGDAKTNEFC---GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 23 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 72 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 127
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI ++ I++ D G +
Sbjct: 128 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--EQGYIQVTDFGFAKRVKGRTWXL 185
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y AP +I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 39/221 (17%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLLKLVN 468
G Y + + +G F+KV A+ + TG +V +KII DK + S E+++ K++N
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLN 71
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL-- 523
+I++L++ + L++V E SGGE + L GR
Sbjct: 72 ------HPNIVKLFEVIETEKTLYLVXEY-------------ASGGEVFDYLVAHGRXKE 112
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN-LC 578
+ RQ + A++Y H I+H DLK EN+L+ + IKI D G S+ F N L
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA--DXNIKIADFGFSNEFTFGNKLD 170
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ + Y APE+ G YD ++D+WSLG IL L +G +
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+Y E +G A V+ A D+ TG +V ++ + + + + L+ NKN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+I+ D + + L++V E L + E G++ + R+CL+AL
Sbjct: 78 --NIVNYLDSYLVGDELWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQAL 129
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT----DNLCLYVQSRSYRAPE 590
E+LHS +IH D+K +NIL+ +K+ D G C Q V + + APE
Sbjct: 130 EFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFG-FCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTGE 617
V+ Y K+D+WSLG + E+ GE
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 45/242 (18%)
Query: 406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLK 465
II N + Y + +G ++ V+ A D + +V +K + F+ +D ++L+
Sbjct: 20 IIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR---MFEDLIDCKRILR 76
Query: 466 LVNKNDPADEHHILRLYDY-----FYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL 520
+ + +I+RL+D + L+IV E+ ++L + K + T
Sbjct: 77 EITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK------TPIFLTE 130
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTD---- 575
++ I L +++H GIIH DLKP N L+ Q C +KI D G + +D
Sbjct: 131 QHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN--QDCSVKICDFGLARTINSDKDIH 188
Query: 576 -----------------------NLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILA 611
L +V +R YRAPE+I+ Y ID+WS GCI A
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 612 EL 613
EL
Sbjct: 249 EL 250
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+Y E +G A V+ A D+ TG +V ++ + + + + L+ NKN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 78
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+I+ D + + L++V E L + E G++ + R+CL+AL
Sbjct: 79 --NIVNYLDSYLVGDELWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQAL 130
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT----DNLCLYVQSRSYRAPE 590
E+LHS +IH D+K +NIL+ +K+ D G C Q V + + APE
Sbjct: 131 EFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFG-FCAQITPEQSKRSXMVGTPYWMAPE 187
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTGE 617
V+ Y K+D+WSLG + E+ GE
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+Y E +G A V+ A D+ TG +V ++ + + + + L+ NKN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+I+ D + + L++V E L + E G++ + R+CL+AL
Sbjct: 78 --NIVNYLDSYLVGDELWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQAL 129
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT----DNLCLYVQSRSYRAPE 590
E+LHS +IH D+K +NIL+ +K+ D G C Q V + + APE
Sbjct: 130 EFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFG-FCAQITPEQSKRSXMVGTPYWMAPE 186
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTGE 617
V+ Y K+D+WSLG + E+ GE
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E +G+ F+KV A + TG V +KI+ DK+ L IK KN
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIM--DKNTLGSDLPRIKTEIEALKN--LRH 67
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY---FTLGRL-----QVIT 527
HI +LY +F+V E GGE + + RL +V+
Sbjct: 68 QHICQLYHVLETANKIFMVLEYC-------------PGGELFDYIISQDRLSEEETRVVF 114
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ----S 583
RQ + A+ Y+HS G H DLKPEN+L Y + +K+ID G N ++Q S
Sbjct: 115 RQIVSAVAYVHSQGYAHRDLKPENLLFDEYHK--LKLIDFGLCAKPKGNKDYHLQTCCGS 172
Query: 584 RSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTG 616
+Y APE+I G Y + D+WS+G +L L G
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLL 464
+T + Y V E LG AFS V + TG++ KII K DF +
Sbjct: 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 83
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRL 523
KL + N I+RL+D ++V +L+ L+E + +++
Sbjct: 84 KLQHPN-------IVRLHDSIQEESFHYLVFDLVTGGELFE------DIVAREFYSEADA 130
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDNLCL--Y 580
+Q LE++ Y HS GI+H +LKPEN+L+ S + +K+ D G + D+ +
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y +PEV+ PY + +D+W+ G IL L G
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+Y E +G A V+ A D+ TG +V ++ + + + + L+ NKN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+I+ D + + L++V E L + E G++ + R+CL+AL
Sbjct: 78 --NIVNYLDSYLVGDELWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQAL 129
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT----DNLCLYVQSRSYRAPE 590
E+LHS +IH D+K +NIL+ +K+ D G C Q V + + APE
Sbjct: 130 EFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFG-FCAQITPEQSKRSEMVGTPYWMAPE 186
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTGE 617
V+ Y K+D+WSLG + E+ GE
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHH 477
+ LG F V+ A++ + LK++ K ++ E +L + + +
Sbjct: 18 IVRPLGKGKFGNVYLAREKQNKFIMALKVL--FKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 478 ILRLYDYFYHLEHLFIVCELL-RANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
ILR+Y+YF+ + ++++ E R LY E QK + F R + +AL
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALH 128
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC----FQTDNLCLYVQSRSYRAPEV 591
Y H +IH D+KPEN+L+ + E+KI D G S + +C + Y PE+
Sbjct: 129 YCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEM 183
Query: 592 IIGLPYDQKIDLWSLGCILAELWTG 616
I G +D+K+DLW G + E G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
NT ++ + LG+ +F +V + +G +KI LD+ K++KL
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI-----------LDKQKVVKLKQ 84
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL----- 523
+E IL+ ++ + ++ F + +NLY ++ +GGE + L R+
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEY--VAGGEMFSHLRRIGRFSE 140
Query: 524 ---QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY 580
+ Q + EYLHSL +I+ DLKPEN+LI Q+ I++ D G +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWXL 198
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ APE+I+ Y++ +D W+LG ++ E+ G
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + LK++ K ++ E +L + + +ILR+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVL--FKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 482 YDYFYHLEHLFIVCELL-RANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y+YF+ + ++++ E R LY E QK + F R + +AL Y H
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHE 133
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSC----FQTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ + E+KI D G S + +C + Y PE+I G
Sbjct: 134 RKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGK 188
Query: 596 PYDQKIDLWSLGCILAELWTG 616
+D+K+DLW G + E G
Sbjct: 189 THDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + LK++ K ++ E +L + + +ILR+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVL--FKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 482 YDYFYHLEHLFIVCELL-RANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y+YF+ + ++++ E R LY E QK + F R + +AL Y H
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHE 132
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSC----FQTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ + E+KI D G S + +C + Y PE+I G
Sbjct: 133 RKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGK 187
Query: 596 PYDQKIDLWSLGCILAELWTG 616
+D+K+DLW G + E G
Sbjct: 188 THDEKVDLWCAGVLCYEFLVG 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLL 464
+T + Y V E LG AFS V + TG++ KII K DF +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
KL + N I+RL+D ++V +L+ + ++ +++
Sbjct: 61 KLQHPN-------IVRLHDSIQEESFHYLVFDLVTGG-----ELFEDIVAREFYSEADAS 108
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDNLCL--YV 581
+Q LE++ Y HS GI+H +LKPEN+L+ S + +K+ D G + D+ +
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 168
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y +PEV+ PY + +D+W+ G IL L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+Y + E LG F V + + + K +K + D++ + K ++ + A
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK------VKGTDQVLVKKEISILNIAR 59
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT--RQCLE 532
+IL L++ F +E L ++ E + + L F++ N + F L ++++ Q E
Sbjct: 60 HRNILHLHESFESMEELVMIFEFI-SGLDIFERINTSA-----FELNEREIVSYVHQVCE 113
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSRSYRAPE 590
AL++LHS I H D++PENI+ ++ + IKII+ G + DN L + Y APE
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTG 616
V D+WSLG ++ L +G
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 501 NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI--KSYQ 558
++ +F + ++ + G ++ + Q L+ + YLH+ ++H DLKP NIL+ + +
Sbjct: 108 HIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPE 167
Query: 559 RCEIKIIDLG------SSCFQTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILA 611
R +KI D+G S +L V + YRAPE+++G Y + ID+W++GCI A
Sbjct: 168 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA 227
Query: 612 ELWTGE 617
EL T E
Sbjct: 228 ELLTSE 233
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLL 464
+T + Y V E LG AFS V + TG++ KII K DF +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
KL + N I+RL+D ++V +L+ + ++ +++
Sbjct: 61 KLQHPN-------IVRLHDSIQEESFHYLVFDLVTGG-----ELFEDIVAREFYSEADAS 108
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDNLCL--YV 581
+Q LE++ Y HS GI+H +LKPEN+L+ S + +K+ D G + D+ +
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 168
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y +PEV+ PY + +D+W+ G IL L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+Y E +G A V+ A D+ TG +V ++ + + + + L+ NKN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 78
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+I+ D + + L++V E L + E G++ + R+CL+AL
Sbjct: 79 --NIVNYLDSYLVGDELWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQAL 130
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT----DNLCLYVQSRSYRAPE 590
E+LHS +IH ++K +NIL+ +K+ D G C Q V + + APE
Sbjct: 131 EFLHSNQVIHRNIKSDNILLG--MDGSVKLTDFG-FCAQITPEQSKRSTMVGTPYWMAPE 187
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTGE 617
V+ Y K+D+WSLG + E+ GE
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLK 465
T + Y V E LG AFS V + TG++ KII K DF + K
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525
L + N I+RL+D ++V +L+ + ++ +++
Sbjct: 61 LQHPN-------IVRLHDSIQEESFHYLVFDLVTGG-----ELFEDIVAREFYSEADASH 108
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDNLCL--YVQ 582
+Q LE++ Y HS GI+H +LKPEN+L+ S + +K+ D G + D+ +
Sbjct: 109 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG 168
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y +PEV+ PY + +D+W+ G IL L G
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN------------DKDFFDQSLDEIKL 463
Y V ++ S ++ V D G+ V +K + N D + L EI+L
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 464 LKLVNKNDPADEHH--ILRLYDYFYHLEH-----LFIVCELLRANLYEFQKFNQESGGEA 516
L HH IL L D F H E L++V EL+R +L +
Sbjct: 83 LN--------HFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRI 129
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ +Q L L LH G++H DL P NIL+ I +L N
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 577 LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELW 614
YV R YRAPE+++ + + +D+WS GC++AE++
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E +G AFS V + + TG +KI+ K L L + +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
HI+ L + + L++V E + F+ + G Y + RQ LEAL
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY-SEAVASHYMRQILEALR 144
Query: 536 YLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPE 590
Y H IIH D+KPEN+L+ S + +K+ D G + Q L R + APE
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPHFMAPE 203
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
V+ PY + +D+W G IL L +G CL
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG--CL 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN------------DKDFFDQSLDEIKL 463
Y V ++ S ++ V D G+ V +K + N D + L EI+L
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 464 LKLVNKNDPADEHH--ILRLYDYFYHLEH-----LFIVCELLRANLYEFQKFNQESGGEA 516
L HH IL L D F H E L++V EL+R +L +
Sbjct: 83 LN--------HFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRI 129
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ +Q L L LH G++H DL P NIL+ I +L N
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 577 LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELW 614
YV R YRAPE+++ + + +D+WS GC++AE++
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLV 467
+N V + Y V E +G ++S+ + T ++ +K+I DK D S +EI++L
Sbjct: 21 MNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI--DKSKRDPS-EEIEILLRY 77
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRL 523
++ +I+ L D + +H+++V EL+R + QKF E EA F L +
Sbjct: 78 GQHP-----NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER--EASFVLHTI 130
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ +EYLHS G++H DLKP NIL C ++I D G + + +N L
Sbjct: 131 G-------KTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLL 182
Query: 580 YVQ--SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ APEV+ YD+ D+WSLG +L + G
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
E +G +F +VF+ D T V +KII D + + + + + D ++
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL-------GRLQVITRQCLE 532
+ Y + L+I+ E L GG A L ++ I R+ L+
Sbjct: 84 KYYGSYLKDTKLWIIMEYL-------------GGGSALDLLEPGPLDETQIATILREILK 130
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAP 589
L+YLHS IH D+K N+L+ + E+K+ D G + TD +V + + AP
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 188
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTGE 617
EVI YD K D+WSLG EL GE
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
RY + E LG S+V A+DL DV +K+++ D F+ + E + +N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 471 DPADEHHILRLYDYFYHLEHL----FIVCELLRANLYEFQKFNQESGGEAYFTLGR-LQV 525
PA I+ +YD +IV E + + E T R ++V
Sbjct: 72 -PA----IVAVYDTGEAETPAGPLPYIVMEYV-----DGVTLRDIVHTEGPMTPKRAIEV 121
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------KIIDLGSSCFQTDNLC 578
I C +AL + H GIIH D+KP NILI + ++ I D G+S QT
Sbjct: 122 IADAC-QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT---A 177
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + Y +PE G D + D++SLGC+L E+ TGE
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 150 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
E +G +F +VF+ D T V +KII D + + + + + D ++
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL-------GRLQVITRQCLE 532
+ Y + L+I+ E L GG A L ++ I R+ L+
Sbjct: 89 KYYGSYLKDTKLWIIMEYL-------------GGGSALDLLEPGPLDETQIATILREILK 135
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAP 589
L+YLHS IH D+K N+L+ + E+K+ D G + TD +V + + AP
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTGE 617
EVI YD K D+WSLG EL GE
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
E +G +F +VF+ D T V +KII D + + + + + D ++
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL-------GRLQVITRQCLE 532
+ Y + L+I+ E L GG A L ++ I R+ L+
Sbjct: 69 KYYGSYLKDTKLWIIMEYL-------------GGGSALDLLEPGPLDETQIATILREILK 115
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAP 589
L+YLHS IH D+K N+L+ + E+K+ D G + TD +V + + AP
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTGE 617
EVI YD K D+WSLG EL GE
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLVNKNDPADEHHILR 480
LG + V+ +DL V + +K I + Q L +EI L K
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK--------------- 74
Query: 481 LYDYFYHLEHLFIVCELLRANLYEFQK-FNQESGGEAYFTLGR------------LQVIT 527
HL+H IV L + F K F ++ G + L R + T
Sbjct: 75 ------HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC-FQTDNLC--LYVQSR 584
+Q LE L+YLH I+H D+K +N+LI +Y +KI D G+S N C + +
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETFTGTL 187
Query: 585 SYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGE 617
Y APE+I P Y + D+WSLGC + E+ TG+
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
E +G +F +VF+ D T V +KII D + + + + + D ++
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII----DLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL-------GRLQVITRQCLE 532
+ Y + L+I+ E L GG A L ++ I R+ L+
Sbjct: 69 KYYGSYLKDTKLWIIMEYL-------------GGGSALDLLEPGPLDETQIATILREILK 115
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAP 589
L+YLHS IH D+K N+L+ + E+K+ D G + TD +V + + AP
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTGE 617
EVI YD K D+WSLG EL GE
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDV----CLKIIKNDK-DFFDQSLDEIKLLKLVNK 469
++ + + LG +F KVF + + +G D +K++K D+ +++ LV
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
N P I++L+ F L+++ + LR F + ++E FT ++ +
Sbjct: 84 NHP----FIVKLHYAFQTEGKLYLILDFLRGGDL-FTRLSKE----VMFTEEDVKFYLAE 134
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD------NLCLYVQS 583
AL++LHSLGII+ DLKPENIL+ + IK+ D G S D + C V+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVE- 191
Query: 584 RSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
Y APEV+ + Q D WS G ++ E+ TG +
Sbjct: 192 --YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLVNKNDPADEHHILR 480
LG + V+ +DL V + +K I + Q L +EI L K
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK--------------- 60
Query: 481 LYDYFYHLEHLFIVCELLRANLYEFQK-FNQESGGEAYFTLGR------------LQVIT 527
HL+H IV L + F K F ++ G + L R + T
Sbjct: 61 ------HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC-FQTDNLC--LYVQSR 584
+Q LE L+YLH I+H D+K +N+LI +Y +KI D G+S N C + +
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETFTGTL 173
Query: 585 SYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGE 617
Y APE+I P Y + D+WSLGC + E+ TG+
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIK-LLKLVNKNDPADEHH 477
TE LG F +V + ++ TG+ + KIIK + D+ +E+K + ++N+ D A+
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKT-RGMKDK--EEVKNEISVMNQLDHAN--- 147
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI--TRQCLEALE 535
+++LYD F + +V E + F + ES + L L I +Q E +
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGEL-FDRIIDES-----YNLTELDTILFMKQICEGIR 201
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSYRAPEVI- 592
++H + I+H DLKPENIL + +IKIID G + + L + + + APEV+
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 593 ---IGLPYDQKIDLWSLGCILAELWTG 616
+ P D+WS+G I L +G
Sbjct: 262 YDFVSFP----TDMWSVGVIAYMLLSG 284
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N+LI R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKND 471
+Y E +G + V++A+D G V LK I+ D+ ++ EI LLK
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLK------ 74
Query: 472 PADEHH--ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ HH I+ L D + L +V E + +L + N+ ++ ++++ Q
Sbjct: 75 --ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS-----QIKIYLYQ 127
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDNLCLYVQSRSY 586
L + + H I+H DLKP+N+LI S +K+ D G + + V + Y
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 587 RAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
RAP+V++G Y +D+WS+GCI AE+ TG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
RY + E LG S+V A+DL DV +K+++ D F+ + E + +N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 471 DPADEHHILRLYDYFYHLEHL----FIVCELLRANLYEFQKFNQESGGEAYFTLGR-LQV 525
PA I+ +YD +IV E + + E T R ++V
Sbjct: 72 -PA----IVAVYDTGEAETPAGPLPYIVMEYV-----DGVTLRDIVHTEGPMTPKRAIEV 121
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------KIIDLGSSCFQTDNLC 578
I C +AL + H GIIH D+KP NI+I + ++ I D G+S QT
Sbjct: 122 IADAC-QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT---A 177
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + Y +PE G D + D++SLGC+L E+ TGE
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKND 471
+Y E +G + V++A+D G V LK I+ D+ ++ EI LLK
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLK------ 74
Query: 472 PADEHH--ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
+ HH I+ L D + L +V E + +L + N+ ++ ++++ Q
Sbjct: 75 --ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS-----QIKIYLYQ 127
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS---CFQTDNLCLYVQSRSY 586
L + + H I+H DLKP+N+LI S +K+ D G + + V + Y
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 587 RAPEVIIG-LPYDQKIDLWSLGCILAELWTGE 617
RAP+V++G Y +D+WS+GCI AE+ TG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
E +G +F +VF+ D T V +KII D + + + + + D ++
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKII----DLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 480 RLYDYFYHLEHLFIVCE---------LLRANLY-EFQKFNQESGGEAYFTLGRLQVITRQ 529
+ Y + L+I+ E LLRA + EFQ + + ++
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ----------------IATMLKE 128
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSY 586
L+ L+YLHS IH D+K N+L+ ++ ++K+ D G + TD +V + +
Sbjct: 129 ILKGLDYLHSEKKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFW 186
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
APEVI YD K D+WSLG EL GE
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
RY + E LG S+V A+DL DV +K+++ D F+ + E + +N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 471 DPADEHHILRLYDYFYHLEHL----FIVCELLRANLYEFQKFNQESGGEAYFTLGR-LQV 525
PA I+ +YD +IV E + + E T R ++V
Sbjct: 72 -PA----IVAVYDTGEAETPAGPLPYIVMEYV-----DGVTLRDIVHTEGPMTPKRAIEV 121
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------KIIDLGSSCFQTDNLC 578
I C +AL + H GIIH D+KP NI+I + ++ I D G+S QT
Sbjct: 122 IADAC-QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT---A 177
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + Y +PE G D + D++SLGC+L E+ TGE
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
RY + E LG S+V A+DL DV +K+++ D F+ + E + +N
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 471 DPADEHHILRLYDYFYHLEHL----FIVCELLRANLYEFQKFNQESGGEAYFTLGR-LQV 525
PA I+ +YD +IV E + + E T R ++V
Sbjct: 72 -PA----IVAVYDTGEAETPAGPLPYIVMEYV-----DGVTLRDIVHTEGPMTPKRAIEV 121
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------KIIDLGSSCFQTDNLC 578
I C +AL + H GIIH D+KP NI+I + ++ I D G+S QT
Sbjct: 122 IADAC-QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT---A 177
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + Y +PE G D + D++SLGC+L E+ TGE
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 170
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 171 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 224
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 169
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 170 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 223
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 170
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 171 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 224
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDV----CLKIIKNDK-DFFDQSLDEIKLLKLVNK 469
++ + + LG +F KVF + + +G D +K++K D+ +++ LV
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
N P I++L+ F L+++ + LR F + ++E FT ++ +
Sbjct: 85 NHP----FIVKLHYAFQTEGKLYLILDFLRGGDL-FTRLSKE----VMFTEEDVKFYLAE 135
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD------NLCLYVQS 583
AL++LHSLGII+ DLKPENIL+ + IK+ D G S D + C V+
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVE- 192
Query: 584 RSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
Y APEV+ + Q D WS G ++ E+ TG +
Sbjct: 193 --YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDV----CLKIIKNDK-DFFDQSLDEIKLLKLVNK 469
++ + + LG +F KVF + + +G D +K++K D+ +++ LV
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
N P I++L+ F L+++ + LR F + ++E FT ++ +
Sbjct: 84 NHP----FIVKLHYAFQTEGKLYLILDFLRGGDL-FTRLSKE----VMFTEEDVKFYLAE 134
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD------NLCLYVQS 583
AL++LHSLGII+ DLKPENIL+ + IK+ D G S D + C V+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESIDHEKKAYSFCGTVE- 191
Query: 584 RSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
Y APEV+ + Q D WS G ++ E+ TG +
Sbjct: 192 --YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 118 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 176
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 177 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 230
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 505 FQKFNQESGGEAYFTLGR--LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562
F+ N + Y TL ++ + L+AL+Y HS+GI+H D+KP N++I R ++
Sbjct: 113 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KL 171
Query: 563 KIIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
++ID G + F + V SR ++ PE+++ YD +D+WSLGC+LA +
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 150 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 402 KDLP-IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDE 460
K++P ++++ RY +LG F+K ++ D+ T K++ K + +
Sbjct: 29 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQK 86
Query: 461 IKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFT 519
K+ + + D H++ + +F + +++V E+ R +L E K + T
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA------VT 140
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDN 576
+ RQ ++ ++YLH+ +IH DLK N+ + ++KI D G + F +
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGER 198
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ +Y APEV+ + ++D+WSLGCIL L G+
Sbjct: 199 KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 96 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 150
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 151 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 150 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 98 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 152
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 153 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAG 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 150 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 148 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 402 KDLP-IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDE 460
K++P ++++ RY +LG F+K ++ D+ T K++ K + +
Sbjct: 29 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQK 86
Query: 461 IKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFT 519
K+ + + D H++ + +F + +++V E+ R +L E K + T
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA------VT 140
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDN 576
+ RQ ++ ++YLH+ +IH DLK N+ + ++KI D G + F +
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGER 198
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ +Y APEV+ + ++D+WSLGCIL L G+
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
RY + E LG S+V A+DL DV +K+++ D F+ + E + +N
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 88
Query: 471 DPADEHHILRLYDYFYHLEHL----FIVCELLRANLYEFQKFNQESGGEAYFTLGR-LQV 525
PA I+ +YD +IV E + + E T R ++V
Sbjct: 89 -PA----IVAVYDTGEAETPAGPLPYIVMEYV-----DGVTLRDIVHTEGPMTPKRAIEV 138
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------KIIDLGSSCFQTDNLC 578
I C +AL + H GIIH D+KP NI+I + ++ I D G+S QT
Sbjct: 139 IADAC-QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT---A 194
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + Y +PE G D + D++SLGC+L E+ TGE
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 148 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 150 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G +F +V++ D HT V +KII D + + + + + D +I R
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKII----DLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL--GRLQ-----VITRQCLEAL 534
+ + L+I+ E L GG A L G L+ I R+ L+ L
Sbjct: 83 FGSYLKSTKLWIIMEYL-------------GGGSALDLLKPGPLEETYIATILREILKGL 129
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAPEV 591
+YLHS IH D+K N+L+ ++ ++K+ D G + TD +V + + APEV
Sbjct: 130 DYLHSERKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 187
Query: 592 IIGLPYDQKIDLWSLGCILAELWTGE 617
I YD K D+WSLG EL GE
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 415 RYYVTEYL--GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
R Y+ ++ G + V A + HTG V +K D Q E+ ++V D
Sbjct: 44 REYLANFIKIGEGSTGIVCIATEKHTGKQVAVK----KMDLRKQQRRELLFNEVVIMRD- 98
Query: 473 ADEHH--ILRLYDYFYHLEHLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVI 526
HH ++ +Y + + L++V E L ++ + N+E ++ +
Sbjct: 99 --YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----------QIATV 146
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQ 582
L AL YLH+ G+IH D+K ++IL+ S R IK+ D G C Q V
Sbjct: 147 CLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR--IKLSDFGF-CAQVSKEVPKRKXLVG 203
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ + APEVI LPY ++D+WSLG ++ E+ GE
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 148 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS+GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ YD +D+WSLGC+LA +
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASM 225
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I +Q+ ++++ID G + F + V SR +
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ YD +D+WSLGC+LA +
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASM 226
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
+ V LG +F+ V++A+ +HTG++V +K+I DK ++ ++ V +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI--DKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 476 HHILRLYDYFYHLEHLFIVCELLR---ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
IL LY+YF ++++V E+ N Y + S EA + Q +
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEA-------RHFMHQIIT 123
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQSRSY 586
+ YLHS GI+H DL N+L+ + IKI D G + + LC + +Y
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLT--RNMNIKIADFGLATQLKMPHEKHYTLC---GTPNY 178
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+PE+ + + D+WSLGC+ L G
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 72 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 126
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 127 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAG 207
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I +Q+ ++++ID G + F + V SR +
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ YD +D+WSLGC+LA +
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASM 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 96 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 150
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 151 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 100 VKLYFCFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 154
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 155 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAG 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 73 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 127
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 128 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAG 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 28/218 (12%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
+ V + Y V E +G ++S+ + T ++ +K+I DK D S +EI++L
Sbjct: 22 SMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI--DKSKRDPS-EEIEILLRYG 78
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQ 524
++ +I+ L D + +H+++V EL+R + QKF E EA F L +
Sbjct: 79 QHP-----NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER--EASFVLHTIG 131
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLG-SSCFQTDNLCLY 580
+ +EYLHS G++H DLKP NIL C ++I D G + + +N L
Sbjct: 132 -------KTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLM 183
Query: 581 VQ--SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ APEV+ YD+ D+WSLG +L + G
Sbjct: 184 TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 70 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 124
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 125 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 77 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 131
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 132 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 71 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 125
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 126 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAG 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 402 KDLP-IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDE 460
K++P ++++ RY +LG F+K ++ D+ T K++ K + +
Sbjct: 29 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQK 86
Query: 461 IKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFT 519
K+ + + D H++ + +F + +++V E+ R +L E K + T
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA------VT 140
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------Q 573
+ RQ ++ ++YLH+ +IH DLK N+ + ++KI D G + +
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGER 198
Query: 574 TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+LC + +Y APEV+ + ++D+WSLGCIL L G+
Sbjct: 199 KKDLC---GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL---VNKND 471
+Y LGS AF V+ A D +V +K IK +K D +++ KL K+ +
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
+ +I+++ D F + +V E + L F ++ + I RQ +
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA----SYIFRQLV 140
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV--QSRSYRAP 589
A+ YL IIH D+K ENI+I + IK+ID GS+ + Y + Y AP
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIA--EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAP 198
Query: 590 EVIIGLPY-DQKIDLWSLGCILAEL 613
EV++G PY ++++WSLG L L
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTL 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 402 KDLP-IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDE 460
K++P ++++ RY +LG F+K ++ D+ T K++ K + +
Sbjct: 13 KEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP--KSMLLKPHQK 70
Query: 461 IKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFT 519
K+ + + D H++ + +F + +++V E+ R +L E K + T
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA------VT 124
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------Q 573
+ RQ ++ ++YLH+ +IH DLK N+ + ++KI D G + +
Sbjct: 125 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDFGLATKIEFDGER 182
Query: 574 TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+LC + +Y APEV+ + ++D+WSLGCIL L G+
Sbjct: 183 KKDLC---GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 92 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 146
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 147 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAG 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
N Y + E LG AFS V + + G + KII K + D KL +
Sbjct: 17 NLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL---SARDHQKLEREAR 73
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
+I+RL+D H +++ +L+ + ++ Y++ +
Sbjct: 74 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG-----ELFEDIVAREYYSEADASHCIQ 128
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSC---FQTDNLCLYVQSR 584
Q LEA+ + H +G++H DLKPEN+L+ S + +K+ D G + + + +
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 188
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
Y +PEV+ PY + +DLW+ G IL L G
Sbjct: 189 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E LG AFS V + + TG + KII K + D KL +
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARICRLLKH 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+I+RL+D ++V +L+ + ++ Y++ +Q LE++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGG-----ELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSC-FQTDNLCL--YVQSRSYRAPEV 591
+ H GI+H DLKPEN+L+ S + +K+ D G + Q D + + Y +PEV
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 592 IIGLPYDQKIDLWSLGCILAELWTG 616
+ PY + +D+W+ G IL L G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 153/379 (40%), Gaps = 57/379 (15%)
Query: 276 DLIDLQHNVVGDSSTDCDLAPHPGTEKXXXXXXXXXXXXIDWIEGFKGSSDLHFKGAEKD 335
+L+ + N + D L P P +E +W E F+ K ++KD
Sbjct: 183 NLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFR----FQLKESDKD 238
Query: 336 L-MPAEIDNSD-TRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRK 393
+ EI + D T + G+L G ++ ++ GV L+ +EE E F++ +
Sbjct: 239 RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLL---SQEEGEYFNVPVPPEG 295
Query: 394 N------RTGFEENK--------------DLPIILNTVIAGRYYVTEY-----LGSAAFS 428
+ R FE K + N R +T++ LG +F
Sbjct: 296 SEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFG 355
Query: 429 KVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484
KV ++ T +KI+K D D + ++ E ++L L P + +L+
Sbjct: 356 KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL-----PGKPPFLTQLHSC 410
Query: 485 FYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGI 542
F ++ L+ V E + +Y Q+ + A F + + L +L S GI
Sbjct: 411 FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-------GLFFLQSKGI 463
Query: 543 IHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQ 599
I+ DLK +N+++ S IKI D G + + + + Y APE+I PY +
Sbjct: 464 IYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 600 KIDLWSLGCILAELWTGEV 618
+D W+ G +L E+ G+
Sbjct: 522 SVDWWAFGVLLYEMLAGQA 540
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 92 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 146
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 147 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAG 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS V A++L T + +KI++ + E K+ + + D D
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ + K+ ++ G F + T + + ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGC--LLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 150 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA---DEHHI 478
LG +FS A++L T + +KI++ + E K+ + + D D
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKR-----HIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
++LY F E L+ L A E K+ ++ G F + T + + ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYF--GLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF-----QTDNLCLYVQSRSYRAPEVII 593
GIIH DLKPENIL+ + I+I D G++ + +V + Y +PE++
Sbjct: 148 GKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
+ DLW+LGCI+ +L G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E LG AFS V + + TG + KII K + D KL +
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARICRLLKH 62
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+I+RL+D ++V +L+ + ++ Y++ +Q LE++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGG-----ELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 536 YLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSC-FQTDNLCL--YVQSRSYRAPEV 591
+ H GI+H DLKPEN+L+ S + +K+ D G + Q D + + Y +PEV
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 592 IIGLPYDQKIDLWSLGCILAELWTG 616
+ PY + +D+W+ G IL L G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 55/231 (23%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
RY + E LG S+V A+DL DV +K+++ D DP+
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-----------------ARDPSF 55
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL-------------- 520
R L H IV +Y + +G Y +
Sbjct: 56 YLRFRREAQNAAALNHPAIVA------VYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT 109
Query: 521 -------GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------KIID 566
++VI C +AL + H GIIH D+KP NI+I + ++ I D
Sbjct: 110 EGPMTPKRAIEVIADAC-QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 567 LGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
G+S QT + + Y +PE G D + D++SLGC+L E+ TGE
Sbjct: 169 SGNSVTQT---AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F V+ A++ + V LK++ K ++ E +L + + +ILRL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVL--FKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 482 YDYFYHLEHLFIVCELL-RANLY-EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y+YFY ++++ E R LY E QK F R I + +AL Y H
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQK-------SCTFDEQRTATIMEELADALMYCHG 141
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSC----FQTDNLCLYVQSRSYRAPEVIIGL 595
+IH D+KPEN+L+ E+KI D G S + +C + Y PE+I G
Sbjct: 142 KKVIHRDIKPENLLLGLKG--ELKIADFGWSVHAPSLRRKTMC---GTLDYLPPEMIEGR 196
Query: 596 PYDQKIDLWSLGCILAELWTG 616
+++K+DLW +G + EL G
Sbjct: 197 MHNEKVDLWCIGVLCYELLVG 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDF 453
F+ K L + + + + +G FS+V++A L GV V LK ++ D
Sbjct: 16 FQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA 75
Query: 454 FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKF 508
+ EI LLK +N + +++ Y F L IV EL L + F+K
Sbjct: 76 RADCIKEIDLLKQLNHPN------VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ 129
Query: 509 NQ---ESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565
+ E YF Q ALE++HS ++H D+KP N+ I + +K+
Sbjct: 130 KRLIPERTVWKYFV---------QLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLG 178
Query: 566 DLGSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
DLG F +T V + Y +PE I Y+ K D+WSLGC+L E+
Sbjct: 179 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E + +L++F + QE ++F
Sbjct: 66 KKVSSGFSG----VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 122 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 171
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDPA 473
Y + LG ++ V++ + T V LK I+ +++ ++ E+ LLK + +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN-- 61
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
I+ L+D + + L +V E L +L +++ + G + +++ Q L
Sbjct: 62 ----IVTLHDIIHTEKSLTLVFEYLDKDL---KQYLDDCGN--IINMHNVKLFLFQLLRG 112
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPE 590
L Y H ++H DLKP+N+LI +R E+K+ D G + ++ Y V + YR P+
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLIN--ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
Query: 591 VIIG-LPYDQKIDLWSLGCILAELWTGE 617
+++G Y +ID+W +GCI E+ TG
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLLK---LVN 468
Y + E LG+ AF V + + TG + K + ++DK+ + + + +L+ LVN
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 469 KNDP-ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+D D++ ++ +Y++ EL E K +++ E
Sbjct: 113 LHDAFEDDNEMVMIYEFMSG-------GELFEKVADEHNKMSEDEAVE----------YM 155
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS-- 585
RQ + L ++H +H DLKPENI+ + + E+K+ID G + + V + +
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 215
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ APEV G P D+WS+G + L +G
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478
+G ++ V + ++ TG V +K +DK ++ EIKLLK + + + +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 479 L----RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
R Y F ++H + L N ++Q +Q Q + +
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQV---------------VQKYLFQIINGI 137
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY---VQSRSYRAPEV 591
+ HS IIH D+KPENIL+ Q +K+ D G + +Y V +R YRAPE+
Sbjct: 138 GFCHSHNIIHRDIKPENILVS--QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 592 IIG-LPYDQKIDLWSLGCILAELWTGE 617
++G + Y + +D+W++GC++ E++ GE
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLLK---LVN 468
Y + E LG+ AF V + + TG + K + ++DK+ + + + +L+ LVN
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 469 KNDP-ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+D D++ ++ +Y++ EL E K +++ E
Sbjct: 219 LHDAFEDDNEMVMIYEFMSG-------GELFEKVADEHNKMSEDEAVE----------YM 261
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS-- 585
RQ + L ++H +H DLKPENI+ + + E+K+ID G + + V + +
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 321
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ APEV G P D+WS+G + L +G
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 30/224 (13%)
Query: 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLL 464
+++ Y + E LGS F+ V + + TG + K IK + + S +EI+
Sbjct: 20 FQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE-- 77
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
+ VN +I+ L+D F + + ++ EL+ SGGE + L +
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELV-------------SGGELFDFLAEKE 124
Query: 525 VIT--------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLG-SSCFQ 573
+T +Q L+ + YLHS I H DLKPENI++ K+ IK+ID G + +
Sbjct: 125 SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 574 TDNLCLYV-QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
N + + + APE++ P + D+WS+G I L +G
Sbjct: 185 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
F L I N +I ++ LG KV Q + T LK++++ ++
Sbjct: 16 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 71
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESG 513
E++L ++ HI+R+ D + +L + L IV E L E Q+ G
Sbjct: 72 RREVELHWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRG 124
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCF 572
+A FT I + EA++YLHS+ I H D+KPEN+L S + I K+ D G +
Sbjct: 125 DQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 183
Query: 573 QT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
T ++L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 184 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVN 468
+++ Y + E LGS F+ V + + TG + K IK + + + ++ + VN
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT- 527
+I+ L+D F + + ++ EL+ SGGE + L + +T
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELV-------------SGGELFDFLAEKESLTE 107
Query: 528 -------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLG-SSCFQTDNL 577
+Q L+ + YLHS I H DLKPENI++ K+ IK+ID G + + N
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167
Query: 578 CLYV-QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + + APE++ P + D+WS+G I L +G
Sbjct: 168 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLVNKNDPAD 474
Y + E LGS AF V + + TG K I ++ +EI ++ +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL------- 105
Query: 475 EHH--ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY-------FTLGRLQV 525
HH ++ L+D F + ++ E L SGGE + + + +V
Sbjct: 106 -HHPKLINLHDAFEDKYEMVLILEFL-------------SGGELFDRIAAEDYKMSEAEV 151
Query: 526 IT--RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLC-LYV 581
I RQ E L+++H I+H D+KPENI+ ++ + +KIID G ++ D + +
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P D+W++G + L +G
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
F L I N +I ++ LG KV Q + T LK++++ ++
Sbjct: 8 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 63
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESG 513
E++L ++ HI+R+ D + +L + L IV E L E Q+ G
Sbjct: 64 RREVELHWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRG 116
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCF 572
+A FT I + EA++YLHS+ I H D+KPEN+L S + I K+ D G +
Sbjct: 117 DQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 175
Query: 573 QT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
T ++L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 176 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG AF +V +A++ +K I++ ++ L E+ LL +N +++R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN------HQYVVRY 67
Query: 482 YDYFYHLEH-------------LFIVCELL-RANLYEF---QKFNQESGGEAYFTLGRLQ 524
Y + + LFI E LY+ + NQ+ + Y+ L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR--DEYWRL---- 121
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ----------- 573
RQ LEAL Y+HS GIIH DLKP NI I + +I L + +
Sbjct: 122 --FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 574 ----TDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+DNL + + Y A EV+ G Y++KID++SLG I E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLLKLVNKNDP 472
Y + E LGS F+ V + ++ TG++ K IK + + S +EI+ + V+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT----- 527
H+++ L+D + + + ++ EL+ SGGE + L + + ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELV-------------SGGELFDFLAQKESLSEEEAT 118
Query: 528 ---RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
+Q L+ + YLH+ I H DLKPENI++ K+ IK+ID G + D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
F L I N +I ++ LG KV Q + T LK++++ ++
Sbjct: 6 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 61
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESG 513
E++L ++ HI+R+ D + +L + L IV E L E Q+ G
Sbjct: 62 RREVELHWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRG 114
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCF 572
+A FT I + EA++YLHS+ I H D+KPEN+L S + I K+ D G +
Sbjct: 115 DQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 173
Query: 573 QT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
T ++L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 174 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 101 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 156
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 157 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 206
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ V + Q +G+ + K+I + +Q + E+++L N +I+
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 77
Query: 480 RLYDYFYHLEHLFIVCELLRAN-----LYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
Y FY + I E + L E ++ +E LG++ + + L L
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE-------ILGKVSIAVLRGLAYL 130
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVII 593
H I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY APE +
Sbjct: 131 REKHQ--IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQ 186
Query: 594 GLPYDQKIDLWSLGCILAELWTGE 617
G Y + D+WS+G L EL G
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
F L I N +I ++ LG KV Q + T LK++++ ++
Sbjct: 1 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 56
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESG 513
E++L ++ HI+R+ D + +L + L IV E L E Q+ G
Sbjct: 57 RREVELHWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRG 109
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCF 572
+A FT I + EA++YLHS+ I H D+KPEN+L S + I K+ D G +
Sbjct: 110 DQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 168
Query: 573 QT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
T ++L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 169 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHH 477
V E LG ++ V++A TG V +K + + D L EI +K ++ D H
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEI--IKEISIMQQCDSPH 85
Query: 478 ILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEY 536
+++ Y ++ L+IV E A ++ + + ++ T + I + L+ LEY
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-----LTEDEIATILQSTLKGLEY 140
Query: 537 LHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC---LYVQSRSYRAPEVII 593
LH + IH D+K NIL+ + K+ D G + TD + + + + APEVI
Sbjct: 141 LHFMRKIHRDIKAGNILLNT--EGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 594 GLPYDQKIDLWSLGCILAELWTGE 617
+ Y+ D+WSLG E+ G+
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
F L I N +I ++ LG KV Q + T LK++++ ++
Sbjct: 7 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 62
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESG 513
E++L ++ HI+R+ D + +L + L IV E L E Q+ G
Sbjct: 63 RREVELHWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRG 115
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCF 572
+A FT I + EA++YLHS+ I H D+KPEN+L S + I K+ D G +
Sbjct: 116 DQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 174
Query: 573 QT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
T ++L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 175 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 82 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 138 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 187
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
F L I N +I ++ LG KV Q + T LK++++ ++
Sbjct: 2 FHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKA 57
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESG 513
E++L ++ HI+R+ D + +L + L IV E L E Q+ G
Sbjct: 58 RREVELHWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRG 110
Query: 514 GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCF 572
+A FT I + EA++YLHS+ I H D+KPEN+L S + I K+ D G +
Sbjct: 111 DQA-FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169
Query: 573 QT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
T ++L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 170 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 67 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 123 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 129
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 130 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 188 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 243
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 244 VQSDIWSMGLSLVEMAVGR 262
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPAD 474
Y + E LGS F+ V + + TG + K IK + + + ++ + VN
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT------- 527
+I+ L+D F + + ++ EL+ SGGE + L + +T
Sbjct: 74 HPNIITLHDIFENKTDVVLILELV-------------SGGELFDFLAEKESLTEDEATQF 120
Query: 528 -RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLG-SSCFQTDNLCLYV-Q 582
+Q L+ + YLHS I H DLKPENI++ K+ IK+ID G + + N +
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 180
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 512 SGGEAYFTL--------GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563
+GGE ++ L R + + AL YLHSL I++ DLKPENIL+ S + I
Sbjct: 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIV 179
Query: 564 IIDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ D G + + + Y APEV+ PYD+ +D W LG +L E+ G
Sbjct: 180 LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 82 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 138 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 187
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 47/225 (20%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG AF +V +A++ +K I++ ++ L E+ LL +N +++R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN------HQYVVRY 67
Query: 482 YDYFYHLEH-------------LFIVCELL-RANLYEF---QKFNQESGGEAYFTLGRLQ 524
Y + + LFI E LY+ + NQ+ + Y+ L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR--DEYWRL---- 121
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-------------KIIDLGSSC 571
RQ LEAL Y+HS GIIH DLKP NI I + +I I+ L S
Sbjct: 122 --FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 572 F--QTDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+DNL + + Y A EV+ G Y++KID++SLG I E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 82 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 138 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 187
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 95 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 151 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 200
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 114 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 169
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 170 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 219
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 260
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 81 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 137 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 186
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 95 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 151 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 200
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 94 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 150 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 199
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 95 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 151 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 200
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 154 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 212
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGM 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLLKLVNKNDP 472
Y + E LGS F+ V + ++ TG++ K IK + + S +EI+ + V+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT----- 527
H+++ L+D + + + ++ EL+ SGGE + L + + ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELV-------------SGGELFDFLAQKESLSEEEAT 118
Query: 528 ---RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
+Q L+ + YLH+ I H DLKPENI++ K+ IK+ID G + D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 66 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 121
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 122 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 171
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLLKLVNKNDP 472
Y + E LGS F+ V + ++ TG++ K IK + + S +EI+ + V+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT----- 527
H+++ L+D + + + ++ EL+ SGGE + L + + ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELV-------------SGGELFDFLAQKESLSEEEAT 118
Query: 528 ---RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
+Q L+ + YLH+ I H DLKPENI++ K+ IK+ID G + D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 94 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 150 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 199
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 81 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 137 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 186
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 67 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 123 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 89 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 144
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 145 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 194
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 109 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 165 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 214
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 94 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 150 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 199
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
L I N +I ++ LG KV Q + T LK++++ ++ E++L
Sbjct: 58 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL 113
Query: 464 LKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
++ HI+R+ D + +L + L IV E L E Q+ G +A FT
Sbjct: 114 HWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQA-FT 165
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQT--DN 576
I + EA++YLHS+ I H D+KPEN+L S + I K+ D G + T ++
Sbjct: 166 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 225
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGM 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 67 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 123 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGM 220
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGM 219
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGM 219
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGM 219
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 95 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 151 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 200
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 94 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 150 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 199
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLLKLVNKNDP 472
Y + E LGS F+ V + ++ TG++ K IK + + S +EI+ + V+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT----- 527
H+++ L+D + + + ++ EL+ SGGE + L + + ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELV-------------SGGELFDFLAQKESLSEEEAT 118
Query: 528 ---RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
+Q L+ + YLH+ I H DLKPENI++ K+ IK+ID G + D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLLKLVNKNDP 472
Y + E LGS F+ V + ++ TG++ K IK + + S +EI+ + V+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT----- 527
H+++ L+D + + + ++ EL+ SGGE + L + + ++
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELV-------------SGGELFDFLAQKESLSEEEAT 118
Query: 528 ---RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSCFQTDNLCL--Y 580
+Q L+ + YLH+ I H DLKPENI++ K+ IK+ID G + D +
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
L I N +I ++ LG KV Q + T LK++++ ++ E++L
Sbjct: 8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL 63
Query: 464 LKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
++ HI+R+ D + +L + L IV E L E Q+ G +A FT
Sbjct: 64 HWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQA-FT 115
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQT--DN 576
I + EA++YLHS+ I H D+KPEN+L S + I K+ D G + T ++
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 135 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGM 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
L I N +I ++ LG KV Q + T LK++++ ++ E++L
Sbjct: 6 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL 61
Query: 464 LKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
++ HI+R+ D + +L + L IV E L E Q+ G +A FT
Sbjct: 62 HWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQA-FT 113
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQT--DN 576
I + EA++YLHS+ I H D+KPEN+L S + I K+ D G + T ++
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG A S V++ + T LK++K D + LL+L + N I++L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPN-------IIKL 113
Query: 482 YDYFYHLEHLFIVCELLRA-----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEY 536
+ F + +V EL+ + E +++ +A +Q LEA+ Y
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA----------VKQILEAVAY 163
Query: 537 LHSLGIIHCDLKPENILIKS-YQRCEIKIIDLGSSCFQTDNLCLYV--QSRSYRAPEVII 593
LH GI+H DLKPEN+L + +KI D G S + + + Y APE++
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR 223
Query: 594 GLPYDQKIDLWSLGCILAELWTG 616
G Y ++D+WS+G I L G
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCG 246
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGM 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
L I N +I ++ LG KV Q + T LK++++ ++ E++L
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL 107
Query: 464 LKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
++ HI+R+ D + +L + L IV E L E Q+ G +A FT
Sbjct: 108 HWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQA-FT 159
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQT--DN 576
I + EA++YLHS+ I H D+KPEN+L S + I K+ D G + T ++
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 62 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 118 ---------QVLEAVRHCHNXGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 167
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILAEL 613
+ PE+++ L YD +D+WSLGC+ A +
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGM 219
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 109 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 165 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 214
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
++ +I RY + + LG S V+ A+D + V +K I +++L + +
Sbjct: 4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK--RFERE 61
Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQV 525
V+ + +I+ + D + ++V E + L E+ ES G ++
Sbjct: 62 VHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGP--LSVDTAIN 115
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-------SSCFQTDNLC 578
T Q L+ +++ H + I+H D+KP+NILI S + +KI D G +S QT+++
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETSLTQTNHVL 173
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
VQ Y +PE G D+ D++S+G +L E+ GE
Sbjct: 174 GTVQ---YFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK-IIKNDKDFFDQSLDEIKLLKLVNKN 470
+ RY + LG VF A D V +K I+ D +L EIK+++ ++ +
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHD 68
Query: 471 DPADEHHIL-----RLYD---YFYHLEHLFIVCELLR---ANLYEFQKFNQESGGEAYFT 519
+ IL +L D L ++IV E + AN+ E +E
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA------ 122
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------Q 573
++ Q L L+Y+HS ++H DLKP N+ I + + +KI D G +
Sbjct: 123 ----RLFMYQLLRGLKYIHSANVLHRDLKPANLFINT-EDLVLKIGDFGLARIMDPHYSH 177
Query: 574 TDNLCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVC 619
+L + ++ YR+P +++ P Y + ID+W+ GCI AE+ TG+
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTL 224
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQSRSY 586
+ L+AL+Y HS GI+H D+KP N++I R ++++ID G + F + V SR +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 587 RAPEVIIGLP-YDQKIDLWSLGCILA 611
+ PE+++ L YD +D+WSLGC+ A
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFA 217
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 62 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 118 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 167
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 65 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 120
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 121 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 170
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 211
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 67
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 126 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG +F KV A+ TG +K++K D D + ++ E ++L L +N P
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA-RNHP----F 85
Query: 478 ILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+ +L+ F + LF V E + ++ QK + F R + + + AL
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-------FDEARARFYAAEIISALM 138
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------YRAP 589
+LH GII+ DLK +N+L+ C K+ D G + +C V + + Y AP
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHC--KLADFGMC---KEGICNGVTTATFCGTPDYIAP 193
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTG 616
E++ + Y +D W++G +L E+ G
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFD-----QSLDEIKLL 464
+ +Y V LGS F V+ + + V +K ++ D+ D+ + + E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGGEAYFT 519
K V+ ++RL D+F + ++ E +L++F + QE ++F
Sbjct: 62 KKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS D +
Sbjct: 118 ---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 167
Query: 580 -YVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEV 618
+ +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 67
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 126 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 67
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 126 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 12/217 (5%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
+ I T Y + E LG AFS V + + G + II K + D KL
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKL 57
Query: 464 LKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL 523
+ +I+RL+D H +++ +L+ + ++ Y++
Sbjct: 58 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG-----ELFEDIVAREYYSEADA 112
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSC---FQTDNLCL 579
+Q LEA+ + H +G++H +LKPEN+L+ S + +K+ D G + +
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + Y +PEV+ PY + +DLW+ G IL L G
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF--DQSLD-EIKLLKLVNKNDP 472
Y + E +G AFS V + L TG + KII K Q L+ E ++ +L+ ++
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN- 64
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
I+RL+D ++V +L+ + ++ Y++ +Q LE
Sbjct: 65 -----IVRLHDSISEEGFHYLVFDLVTGG-----ELFEDIVAREYYSEADASHCIQQILE 114
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCE---IKIIDLGSSC-FQTDNLCL--YVQSRSY 586
A+ + H +G++H DLKPEN+L+ S +C+ +K+ D G + Q D + + Y
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLAS--KCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGY 172
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+PEV+ Y + +D+W+ G IL L G
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
L I N +I ++ LG KV Q + T LK++++ ++ E++L
Sbjct: 6 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL 61
Query: 464 LKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
++ HI+R+ D + +L + L IV E L E Q+ G +A FT
Sbjct: 62 HWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQA-FT 113
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQT--DN 576
I + EA++YLHS+ I H D+KPEN+L S + I K+ D G + T ++
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 577 LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
L + Y APEV+ YD+ D+WSLG I+ L G
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 94
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 95 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 153 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 208
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 209 VQSDIWSMGLSLVEMAVGR 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG +F KV ++ T +KI+K D D + ++ E ++L L P
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL-----PGKPPF 82
Query: 478 ILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+ +L+ F ++ L+ V E + +Y Q+ + A F + + L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI-------GLF 135
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCLYVQSRSYRAPEVI 592
+L S GII+ DLK +N+++ S IKI D G + + + + Y APE+I
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII 193
Query: 593 IGLPYDQKIDLWSLGCILAELWTGEV 618
PY + +D W+ G +L E+ G+
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQA 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y V E +G ++S + T ++ +KII DK D + +EI++L ++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKII--DKSKRDPT-EEIEILLRYGQHP---- 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRA-----NLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
+I+ L D + +++++V EL++ + + F++ FT+ +
Sbjct: 77 -NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITK-------- 127
Query: 531 LEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLG-SSCFQTDNLCLYVQ--SRS 585
+EYLH+ G++H DLKP NIL +S I+I D G + + +N L + +
Sbjct: 128 --TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ APEV+ YD D+WSLG +L + TG
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG +F KV A T +KI+K D D + ++ E ++L L++K
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP-----F 81
Query: 478 ILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+ +L+ F ++ L+ V E + +Y Q+ + +A F + + L
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI-------GLF 134
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS------SCFQTDNLCLYVQSRSYRAP 589
+LH GII+ DLK +N+++ S IKI D G T C + Y AP
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMMDGVTTREFC---GTPDYIAP 189
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTGE 617
E+I PY + +D W+ G +L E+ G+
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 67
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 126 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 67
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 126 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKND 471
+ + + LG +F KVF + + +G +K++K D+ +++ L + N
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
P +++L+ F L+++ + LR F + ++E FT ++ +
Sbjct: 90 P----FVVKLHYAFQTEGKLYLILDFLRGGDL-FTRLSKE----VMFTEEDVKFYLAELA 140
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD------NLCLYVQSRS 585
L++LHSLGII+ DLKPENIL+ + IK+ D G S D + C V+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE--- 195
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
Y APEV+ + D WS G ++ E+ TG +
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL--------DEIKL 463
+ G+Y + + LG ++ KV + D T +C + +K K + + EI+L
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSET---LCRRAVKILKKKKLRRIPNGEANVKKEIQL 59
Query: 464 LK-LVNKNDPADEHHILRLYDYFYHLEH--LFIVCELLRANLYEFQKFNQESGGEAYFTL 520
L+ L +KN +++L D Y+ E +++V E + E +S E F +
Sbjct: 60 LRRLRHKN-------VIQLVDVLYNEEKQKMYMVMEYCVCGMQEML----DSVPEKRFPV 108
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC--FQTDNLC 578
+ Q ++ LEYLHS GI+H D+KP N+L+ + +I + + + F D+ C
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 579 LYVQ-SRSYRAPEVIIGLPYDQ--KIDLWSLGCILAELWTG 616
Q S +++ PE+ GL K+D+WS G L + TG
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 32/207 (15%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG +F +V + +D TG +K ++ + ++ L+ + P I+ L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE------LVACAGLSSP----RIVPL 129
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYL 537
Y + I ELL + ++ G A + LG Q LE LEYL
Sbjct: 130 YGAVREGPWVNIFMELLEGG--SLGQLIKQMGCLPEDRALYYLG-------QALEGLEYL 180
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-CFQTDNLCLYVQSRSY-------RAP 589
H+ I+H D+K +N+L+ S + D G + C Q D L + + Y AP
Sbjct: 181 HTRRILHGDVKADNVLLSS-DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTG 616
EV++G P D K+D+WS C++ + G
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 Q------HPNVITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 399 EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL 458
E++ LP +N Y + E +GS A + V A V +K I +K S+
Sbjct: 3 EDSSALPWSINR---DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSM 57
Query: 459 DEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAY 517
DE LLK + +I+ Y F + L++V +LL ++ + K G
Sbjct: 58 DE--LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS 115
Query: 518 FTL--GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ-- 573
L + I R+ LE LEYLH G IH D+K NIL+ + ++I D G S F
Sbjct: 116 GVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG--EDGSVQIADFGVSAFLAT 173
Query: 574 ----TDNLC--LYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTG 616
T N +V + + APEV+ + YD K D+WS G EL TG
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 42/221 (19%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG +F +V + +D TG +K ++ + F +L+ P I+ L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR--LEVFRAE----ELMACAGLTSP----RIVPL 150
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYL 537
Y + I ELL + +E G A + LG Q LE LEYL
Sbjct: 151 YGAVREGPWVNIFMELLEGG--SLGQLVKEQGCLPEDRALYYLG-------QALEGLEYL 201
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-CFQTDNLCLYV-------QSRSYRAP 589
HS I+H D+K +N+L+ S + D G + C Q D L + + ++ AP
Sbjct: 202 HSRRILHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 590 EVIIGLPYDQKIDLWSLGCILAEL------WT----GEVCL 620
EV++G D K+D+WS C++ + WT G +CL
Sbjct: 261 EVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLK-LVNKN 470
RY LG + +V++A D T V +K I+ ++ ++ E+ LLK L ++N
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
I+ L +H L ++ E +L ++ N + ++ ++ Q
Sbjct: 95 -------IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD------VSMRVIKSFLYQL 141
Query: 531 LEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------SSCFQTDNLCLYVQSR 584
+ + + HS +H DLKP+N+L+ E ++ +G + + +
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITL 201
Query: 585 SYRAPEVIIG-LPYDQKIDLWSLGCILAEL 613
YR PE+++G Y +D+WS+ CI AE+
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 13/212 (6%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E +G FS V + + TG +KI+ K L L + +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
HI+ L + + L++V E + F+ + G Y + RQ LEAL
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY-SEAVASHYMRQILEALR 146
Query: 536 YLHSLGIIHCDLKPENILIKSYQR-CEIKI------IDLGSSCFQTDNLCLYVQSRSYRA 588
Y H IIH D+KP +L+ S + +K+ I LG S V + + A
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG---RVGTPHFMA 203
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
PEV+ PY + +D+W G IL L +G CL
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSG--CL 233
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-------EIKLLKLVN 468
Y + LG F VF L + V +K+I ++ L E+ LL V
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCE--LLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
++RL D+F E +V E L +L+++ G G +
Sbjct: 93 AG--GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE------GPSRCF 144
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL-YVQSRS 585
Q + A+++ HS G++H D+K ENILI + C K+ID GS D + +R
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA-KLIDFGSGALLHDEPYTDFDGTRV 203
Query: 586 YRAPEVIIGLPYDQ-KIDLWSLGCILAELWTGEV 618
Y PE I Y +WSLG +L ++ G++
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 70
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 71 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D + +V +RSY +PE + G Y
Sbjct: 129 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYS 184
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 185 VQSDIWSMGLSLVEMAVGR 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E +GS A + V A V +K I +K S+DE LLK +
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDE--LLKEIQAMSQCHH 67
Query: 476 HHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTL--GRLQVITRQCLE 532
+I+ Y F + L++V +LL ++ + K G L + I R+ LE
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ------TDNLC--LYVQSR 584
LEYLH G IH D+K NIL+ + ++I D G S F T N +V +
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLG--EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 585 SYRAPEVIIGLP-YDQKIDLWSLGCILAELWTG 616
+ APEV+ + YD K D+WS G EL TG
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 45/224 (20%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
YY T E LGS F+ V + ++ TG+ K IK + + + V++ D
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--------RGVSREDIER 63
Query: 475 EHHILR---------LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525
E IL+ L++ + + + ++ EL+ +GGE + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELV-------------AGGELFDFLAEKES 110
Query: 526 IT--------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---F 572
+T +Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 573 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + ++ APE++ P + D+WS+G I L +G
Sbjct: 171 GNEFKNIF-GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHH 477
V E +G AF V +A+ DV +K I+++ + + ++L +L N P +
Sbjct: 12 VEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESE---RKAFIVELRQLSRVNHP----N 62
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEA--YFTLGRLQVITRQCLEALE 535
I++LY L + +V E +N G E Y+T QC + +
Sbjct: 63 IVKLYGAC--LNPVCLVMEYAEGG----SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 536 YLHSL---GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
YLHS+ +IH DLKP N+L+ + +KI D G++C ++ S ++ APEV
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTV-LKICDFGTACDIQTHMTNNKGSAAWMAPEVF 175
Query: 593 IGLPYDQKIDLWSLGCILAELWT 615
G Y +K D++S G IL E+ T
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVIT 198
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHH 477
V E +G AF V +A+ DV +K I+++ + + ++L +L N P +
Sbjct: 13 VEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESE---RKAFIVELRQLSRVNHP----N 63
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEA--YFTLGRLQVITRQCLEALE 535
I++LY L + +V E +N G E Y+T QC + +
Sbjct: 64 IVKLYGAC--LNPVCLVMEYAEGG----SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 536 YLHSL---GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
YLHS+ +IH DLKP N+L+ + +KI D G++C ++ S ++ APEV
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTV-LKICDFGTACDIQTHMTNNKGSAAWMAPEVF 176
Query: 593 IGLPYDQKIDLWSLGCILAELWT 615
G Y +K D++S G IL E+ T
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVIT 199
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG+ VF+ +G+ + K+I + +Q + E+++L N +I+
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIV 86
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
Y FY + I E + + +++G LG++ + + L L H
Sbjct: 87 GFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 144
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYD 598
I+H D+KP NIL+ S R EIK+ D G S D++ +V +RSY +PE + G Y
Sbjct: 145 --IMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 200
Query: 599 QKIDLWSLGCILAELWTGE 617
+ D+WS+G L E+ G
Sbjct: 201 VQSDIWSMGLSLVEMAVGR 219
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG +F +V + +D TG +K ++ + F +L+ P I+ L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR--LEVFRAE----ELMACAGLTSP----RIVPL 131
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYL 537
Y + I ELL + +E G A + LG Q LE LEYL
Sbjct: 132 YGAVREGPWVNIFMELLEGG--SLGQLVKEQGCLPEDRALYYLG-------QALEGLEYL 182
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-CFQTDNLCL------YVQ-SRSYRAP 589
HS I+H D+K +N+L+ S + D G + C Q D L Y+ + ++ AP
Sbjct: 183 HSRRILHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 590 EVIIGLPYDQKIDLWSLGCILAEL------WT----GEVCL 620
EV++G D K+D+WS C++ + WT G +CL
Sbjct: 242 EVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 282
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 13/212 (6%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E +G FS V + + TG +KI+ K L L + +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
HI+ L + + L++V E + F+ + G Y + RQ LEAL
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY-SEAVASHYMRQILEALR 144
Query: 536 YLHSLGIIHCDLKPENILIKSYQR-CEIKI------IDLGSSCFQTDNLCLYVQSRSYRA 588
Y H IIH D+KP +L+ S + +K+ I LG S V + + A
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG---RVGTPHFMA 201
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWTGEVCL 620
PEV+ PY + +D+W G IL L +G CL
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG--CL 231
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 Q------HPNVITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 71 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 111
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 112 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 172 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 71 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 111
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 112 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 172 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 Q------HPNVITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 QHPN------VITLHEVYENKTDVILIGELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+ ++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 QHPN------VITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 32/207 (15%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G +F +V + +D TG +K ++ + ++ L+ + P I+ L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE------LVACAGLSSP----RIVPL 115
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYL 537
Y + I ELL + ++ G A + LG Q LE LEYL
Sbjct: 116 YGAVREGPWVNIFMELLEGG--SLGQLIKQMGCLPEDRALYYLG-------QALEGLEYL 166
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-CFQTDNLCLYVQSRSY-------RAP 589
H+ I+H D+K +N+L+ S + D G + C Q D L + + Y AP
Sbjct: 167 HTRRILHGDVKADNVLLSS-DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTG 616
EV++G P D K+D+WS C++ + G
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLV 467
YY T E LGS F+ V + ++ TG+ K IK + + E+ +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+++ L++ + + + ++ EL+ +GGE + L + +T
Sbjct: 72 Q------HPNVITLHEVYENKTDVILILELV-------------AGGELFDFLAEKESLT 112
Query: 528 --------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---FQT 574
+Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 477 HILRLYDYFYHLEH----LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
HI+ + D + ++ H L I+ E + E QE G +A FT I R
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGG--ELFSRIQERGDQA-FTEREAAEIMRDIGT 139
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDN-LCLYVQSRSYRAPE 590
A+++LHS I H D+KPEN+L S ++ +K+ D G + T N L + Y APE
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPE 199
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTG 616
V+ YD+ D+WSLG I+ L G
Sbjct: 200 VLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 32/207 (15%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G +F +V + +D TG +K ++ + ++ L+ + P I+ L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE------LVACAGLSSP----RIVPL 131
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYL 537
Y + I ELL + ++ G A + LG Q LE LEYL
Sbjct: 132 YGAVREGPWVNIFMELLEGG--SLGQLIKQMGCLPEDRALYYLG-------QALEGLEYL 182
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-CFQTDNLCLYVQSRSY-------RAP 589
H+ I+H D+K +N+L+ S + D G + C Q D L + + Y AP
Sbjct: 183 HTRRILHGDVKADNVLLSS-DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTG 616
EV++G P D K+D+WS C++ + G
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 477 HILRLYDYFYHLEH----LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
HI+ + D + ++ H L I+ E + E QE G +A FT I R
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGG--ELFSRIQERGDQA-FTEREAAEIMRDIGT 120
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGSSCFQTDN-LCLYVQSRSYRAPE 590
A+++LHS I H D+KPEN+L S ++ +K+ D G + T N L + Y APE
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPE 180
Query: 591 VIIGLPYDQKIDLWSLGCILAELWTG 616
V+ YD+ D+WSLG I+ L G
Sbjct: 181 VLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 45/224 (20%)
Query: 416 YYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
YY T E LGS F+ V + ++ TG+ K IK + + + V++ D
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--------RGVSREDIER 63
Query: 475 EHHILR---------LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525
E IL+ L++ + + + ++ EL+ +GGE + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELV-------------AGGELFDFLAEKES 110
Query: 526 IT--------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSC---F 572
+T +Q L + YLHSL I H DLKPENI++ ++ + IKIID G + F
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 573 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ ++ + + APE++ P + D+WS+G I L +G
Sbjct: 171 GNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 51/226 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG AF +V +A++ +K I++ ++ L E+ LL +N +++R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN------HQYVVRY 67
Query: 482 YDYFYHLEH-------------LFI---VCELLRANLYEF---QKFNQESGGEAYFTLGR 522
Y + + LFI CE LY+ + NQ+ + Y+ L
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCE--NRTLYDLIHSENLNQQR--DEYWRL-- 121
Query: 523 LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ--------- 573
RQ LEAL Y+HS GIIH +LKP NI I + +I L + +
Sbjct: 122 ----FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 574 ------TDNLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAE 612
+DNL + + Y A EV+ G Y++KID +SLG I E
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD-QSLDEIK--------LLK 465
+Y + +G S V + TG + +KI++ + + L+E++ +L+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQ 524
V A HI+ L D + +F+V +L+R L+++ + + +
Sbjct: 155 QV-----AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT------EKVALSEKETR 203
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF--QTDNLCLYVQ 582
I R LEA+ +LH+ I+H DLKPENIL+ +I++ D G SC + L
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFSCHLEPGEKLRELCG 261
Query: 583 SRSYRAPEVI------IGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE++ Y +++DLW+ G IL L G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 44/222 (19%)
Query: 416 YYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
+ + LG + KVFQ + + +TG +K++K K + + N D
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-------------KAMIVRNAKDT 65
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQE-------SGGEAYFTLGRLQV 525
A H + ++H FIV +Y FQ + SGGE + L R +
Sbjct: 66 A---HTKAERNILEEVKHPFIV-----DLIYAFQTGGKLYLILEYLSGGELFMQLEREGI 117
Query: 526 ITR--------QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQT 574
+ AL +LH GII+ DLKPENI++ + +K+ D G S
Sbjct: 118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDG 175
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + Y APE+++ +++ +D WSLG ++ ++ TG
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 44/222 (19%)
Query: 416 YYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
+ + LG + KVFQ + + +TG +K++K K + + N D
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-------------KAMIVRNAKDT 65
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQE-------SGGEAYFTLGRLQV 525
A H + ++H FIV +Y FQ + SGGE + L R +
Sbjct: 66 A---HTKAERNILEEVKHPFIV-----DLIYAFQTGGKLYLILEYLSGGELFMQLEREGI 117
Query: 526 ITR--------QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQT 574
+ AL +LH GII+ DLKPENI++ + +K+ D G S
Sbjct: 118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDG 175
Query: 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + Y APE+++ +++ +D WSLG ++ ++ TG
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 70
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 71 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 111
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 112 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKX 169
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 477 HILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
HI+R+ D + +L + L IV E L E Q+ G +A FT I + E
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGG--ELFSRIQDRGDQA-FTEREASEIXKSIGE 172
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQT--DNLCLYVQSRSYRAP 589
A++YLHS+ I H D+KPEN+L S + I K+ D G + T ++L + Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTG 616
EV+ YD+ D WSLG I L G
Sbjct: 233 EVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 65
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 66 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKT 164
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 65
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 66 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKX 164
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 68
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 69 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 109
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 110 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKT 167
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 206
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 65
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 66 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKT 164
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
+LG F+K F+ D T KI+ K + K+ ++ + H++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE-SGGEAYFTLGRLQVITRQCLEALEYLH 538
+ +F + +F+V EL R +L E K + + EA + L RQ + +YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-------RQIVLGCQYLH 158
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDNLCLYVQSRSYRAPEVIIGL 595
+IH DLK N+ + + E+KI D G + + + + + +Y APEV+
Sbjct: 159 RNRVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+ ++D+WS+GCI+ L G+
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGK 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 65
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 66 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKX 164
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+D I+RLYDY +++++V E +L + K + +
Sbjct: 113 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYW 161
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSR-- 584
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D + S+
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 585 --SYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGEV 618
+Y PE I + ++ D+WSLGCIL + G+
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT 527
+D I+RLYDY +++++V E +L + K + +
Sbjct: 113 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYW 161
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSR-- 584
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D + S+
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 585 --SYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGEV 618
+Y PE I + ++ D+WSLGCIL + G+
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI++ + KD ++ E ++L+ N P
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHP----- 65
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITRQ- 529
L A Y FQ ++ +GGE +F L R +V T +
Sbjct: 66 -------------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 530 -------CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCL 579
+ ALEYLHS +++ D+K EN+++ + IKI D G +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKX 164
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
+LG F+K F+ D T KI+ K + K+ ++ + H++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE-SGGEAYFTLGRLQVITRQCLEALEYLH 538
+ +F + +F+V EL R +L E K + + EA + L RQ + +YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-------RQIVLGCQYLH 156
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDNLCLYVQSRSYRAPEVIIGL 595
+IH DLK N+ + + E+KI D G + + + + + +Y APEV+
Sbjct: 157 RNRVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+ ++D+WS+GCI+ L G+
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
AG + + E +G+ + +V++ + + TG +K++ D ++ EI +LK +
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS---- 78
Query: 473 ADEHH--ILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
HH I Y F + L++V E A + + G +
Sbjct: 79 ---HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAG--SVTDLIKNTKGNT-LKEEWIA 132
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LY 580
I R+ L L +LH +IH D+K +N+L+ + E+K++D G S Q D +
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSA-QLDRTVGRRNTF 189
Query: 581 VQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTG 616
+ + + APEVI YD K DLWSLG E+ G
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 112
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGG---EAYFTLGRLQ 524
+D I+RLYDY +++++V E +L + K + ++Y+
Sbjct: 113 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW------ 161
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQS 583
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D + S
Sbjct: 162 ---KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 584 R----SYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGEV 618
+ +Y PE I + ++ D+WSLGCIL + G+
Sbjct: 216 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
+LG F+K F+ D T KI+ K + K+ ++ + H++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE-SGGEAYFTLGRLQVITRQCLEALEYLH 538
+ +F + +F+V EL R +L E K + + EA + L RQ + +YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-------RQIVLGCQYLH 138
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQSRSYRAPEVI 592
+IH DLK N+ + + E+KI D G + + LC + +Y APEV+
Sbjct: 139 RNRVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVL 193
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
+ ++D+WS+GCI+ L G+
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 396 TGFEENKDLPIILNTVIAGR---------YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKI 446
+G EE K+ +NT +G+ + + +G +++KV + T +++
Sbjct: 28 SGIEEEKE---AMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRV 84
Query: 447 IKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRAN--LYE 504
+K + D+ +D ++ K V + ++ ++ L+ F LF V E + ++
Sbjct: 85 VKKELVNDDEDIDWVQTEKHVFEQ-ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 143
Query: 505 FQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564
Q+ + A F + + AL YLH GII+ DLK +N+L+ S IK+
Sbjct: 144 MQRQRKLPEEHARFYSAEISL-------ALNYLHERGIIYRDLKLDNVLLDS--EGHIKL 194
Query: 565 IDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
D G D + + +Y APE++ G Y +D W+LG ++ E+ G
Sbjct: 195 TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 438 TGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489
TG+ VC+ +++ D Q E+ ++V D E+ ++ +Y+ + +
Sbjct: 164 TGI-VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN-VVEMYNSYLVGD 221
Query: 490 HLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHC 545
L++V E L ++ + N+E ++ + L+AL LH+ G+IH
Sbjct: 222 ELWVVMEFLEGGALTDIVTHTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHR 271
Query: 546 DLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKI 601
D+K ++IL+ R +K+ D G C Q V + + APE+I LPY ++
Sbjct: 272 DIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 602 DLWSLGCILAELWTGE 617
D+WSLG ++ E+ GE
Sbjct: 329 DIWSLGIMVIEMVDGE 344
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ----SLDEIKLLKLVNKND 471
+ V +G F +V+ + TG +K + + Q +L+E +L LV+ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I+ + F+ + L + +L+ + F+ ++ + +
Sbjct: 251 CP---FIVCMSYAFHTPDKLSFILDLMNGG-----DLHYHLSQHGVFSEADMRFYAAEII 302
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC-FQTDNLCLYVQSRSYRAPE 590
LE++H+ +++ DLKP NIL+ + ++I DLG +C F V + Y APE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 591 VI-IGLPYDQKIDLWSLGCILAELWTG 616
V+ G+ YD D +SLGC+L +L G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ----SLDEIKLLKLVNKND 471
+ V +G F +V+ + TG +K + + Q +L+E +L LV+ D
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I+ + F+ + L + +L+ + F+ ++ + +
Sbjct: 250 CP---FIVCMSYAFHTPDKLSFILDLMNGG-----DLHYHLSQHGVFSEADMRFYAAEII 301
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC-FQTDNLCLYVQSRSYRAPE 590
LE++H+ +++ DLKP NIL+ + ++I DLG +C F V + Y APE
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSKKKPHASVGTHGYMAPE 359
Query: 591 VI-IGLPYDQKIDLWSLGCILAELWTG 616
V+ G+ YD D +SLGC+L +L G
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
+LG F+K F+ D T KI+ K + K+ ++ + H++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE-SGGEAYFTLGRLQVITRQCLEALEYLH 538
+ +F + +F+V EL R +L E K + + EA + L RQ + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-------RQIVLGCQYLH 134
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQSRSYRAPEVI 592
+IH DLK N+ + + E+KI D G + + LC + +Y APEV+
Sbjct: 135 RNRVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVL 189
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
+ ++D+WS+GCI+ L G+
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
+LG F+K F+ D T KI+ K + K+ ++ + H++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE-SGGEAYFTLGRLQVITRQCLEALEYLH 538
+ +F + +F+V EL R +L E K + + EA + L RQ + +YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-------RQIVLGCQYLH 132
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDNLCLYVQSRSYRAPEVIIGL 595
+IH DLK N+ + + E+KI D G + + + + + +Y APEV+
Sbjct: 133 RNRVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 596 PYDQKIDLWSLGCILAELWTGE 617
+ ++D+WS+GCI+ L G+
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLLKLVN 468
Y + E LGS F+ V + ++ TG++ K IK + + E+ +L+ V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVIT- 527
+ I+ L+D + + + ++ EL+ SGGE + L + + ++
Sbjct: 74 HPN------IITLHDVYENRTDVVLILELV-------------SGGELFDFLAQKESLSE 114
Query: 528 -------RQCLEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLGSSCFQTDNLC 578
+Q L+ + YLH+ I H DLKPENI++ K+ IK+ID G + D +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 579 L--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ + APE++ P + D+WS+G I L +G
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 28/217 (12%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ +I L D
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 582 QSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
R + APE + Y + D+WS G ++ E++T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 28/211 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y V E +G ++S + T + +KII DK D + +EI++L ++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKII--DKSKRDPT-EEIEILLRYGQHP---- 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRA-----NLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
+I+ L D + +++++V EL + + + F++ FT+ +
Sbjct: 77 -NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITK-------- 127
Query: 531 LEALEYLHSLGIIHCDLKPENILI--KSYQRCEIKIIDLG-SSCFQTDNLCLYVQ--SRS 585
+EYLH+ G++H DLKP NIL +S I+I D G + + +N L + +
Sbjct: 128 --TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN 185
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ APEV+ YD D+WSLG +L TG
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
+LG F+K F+ D T KI+ K + K+ ++ + H++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQE-SGGEAYFTLGRLQVITRQCLEALEYLH 538
+ +F + +F+V EL R +L E K + + EA + L RQ + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL-------RQIVLGCQYLH 134
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF------QTDNLCLYVQSRSYRAPEVI 592
+IH DLK N+ + + E+KI D G + + LC + +Y APEV+
Sbjct: 135 RNRVIHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVL 189
Query: 593 IGLPYDQKIDLWSLGCILAELWTGE 617
+ ++D+WS+GCI+ L G+
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ----SLDEIKLLKLVNKND 471
+ V +G F +V+ + TG +K + + Q +L+E +L LV+ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I+ + F+ + L + +L+ + F+ ++ + +
Sbjct: 251 CP---FIVCMSYAFHTPDKLSFILDLMNGG-----DLHYHLSQHGVFSEADMRFYAAEII 302
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC-FQTDNLCLYVQSRSYRAPE 590
LE++H+ +++ DLKP NIL+ + ++I DLG +C F V + Y APE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 591 VI-IGLPYDQKIDLWSLGCILAELWTG 616
V+ G+ YD D +SLGC+L +L G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ----SLDEIKLLKLVNKND 471
+ V +G F +V+ + TG +K + + Q +L+E +L LV+ D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I+ + F+ + L + +L+ + F+ ++ + +
Sbjct: 251 CP---FIVCMSYAFHTPDKLSFILDLMNGG-----DLHYHLSQHGVFSEADMRFYAAEII 302
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC-FQTDNLCLYVQSRSYRAPE 590
LE++H+ +++ DLKP NIL+ + ++I DLG +C F V + Y APE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 591 VI-IGLPYDQKIDLWSLGCILAELWTG 616
V+ G+ YD D +SLGC+L +L G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 438 TGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489
TG+ VC+ +++ D Q E+ ++V D E+ ++ +Y+ + +
Sbjct: 87 TGI-VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN-VVEMYNSYLVGD 144
Query: 490 HLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHC 545
L++V E L ++ + N+E ++ + L+AL LH+ G+IH
Sbjct: 145 ELWVVMEFLEGGALTDIVTHTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHR 194
Query: 546 DLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKI 601
D+K ++IL+ R +K+ D G C Q V + + APE+I LPY ++
Sbjct: 195 DIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 602 DLWSLGCILAELWTGE 617
D+WSLG ++ E+ GE
Sbjct: 252 DIWSLGIMVIEMVDGE 267
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G +++KV + T +K++K + D+ +D ++ K V + ++ ++ L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ-ASNHPFLVGL 75
Query: 482 YDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
+ F LF V E + ++ Q+ + A F + + AL YLH
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL-------ALNYLHE 128
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLP 596
GII+ DLK +N+L+ S IK+ D G D + + +Y APE++ G
Sbjct: 129 RGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 597 YDQKIDLWSLGCILAELWTGE 617
Y +D W+LG ++ E+ G
Sbjct: 187 YGFSVDWWALGVLMFEMMAGR 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G +++KV + T +K++K + D+ +D ++ K V + ++ ++ L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ-ASNHPFLVGL 86
Query: 482 YDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
+ F LF V E + ++ Q+ + A F + + AL YLH
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL-------ALNYLHE 139
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLP 596
GII+ DLK +N+L+ S IK+ D G D + + +Y APE++ G
Sbjct: 140 RGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 597 YDQKIDLWSLGCILAELWTG 616
Y +D W+LG ++ E+ G
Sbjct: 198 YGFSVDWWALGVLMFEMMAG 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
+ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 438 TGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489
TG+ VC+ +++ D Q E+ ++V D E+ ++ +Y+ + +
Sbjct: 44 TGI-VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN-VVEMYNSYLVGD 101
Query: 490 HLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHC 545
L++V E L ++ + N+E ++ + L+AL LH+ G+IH
Sbjct: 102 ELWVVMEFLEGGALTDIVTHTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHR 151
Query: 546 DLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKI 601
D+K ++IL+ R +K+ D G C Q V + + APE+I LPY ++
Sbjct: 152 DIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 602 DLWSLGCILAELWTGE 617
D+WSLG ++ E+ GE
Sbjct: 209 DIWSLGIMVIEMVDGE 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 438 TGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489
TG+ VC+ +++ D Q E+ ++V D E+ ++ +Y+ + +
Sbjct: 37 TGI-VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN-VVEMYNSYLVGD 94
Query: 490 HLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHC 545
L++V E L ++ + N+E ++ + L+AL LH+ G+IH
Sbjct: 95 ELWVVMEFLEGGALTDIVTHTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHR 144
Query: 546 DLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKI 601
D+K ++IL+ R +K+ D G C Q V + + APE+I LPY ++
Sbjct: 145 DIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 602 DLWSLGCILAELWTGE 617
D+WSLG ++ E+ GE
Sbjct: 202 DIWSLGIMVIEMVDGE 217
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G +++KV + T +K++K + D+ +D ++ K V + ++ ++ L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ-ASNHPFLVGL 71
Query: 482 YDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
+ F LF V E + ++ Q+ + A F + + AL YLH
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL-------ALNYLHE 124
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLP 596
GII+ DLK +N+L+ S IK+ D G D + + +Y APE++ G
Sbjct: 125 RGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 597 YDQKIDLWSLGCILAELWTGE 617
Y +D W+LG ++ E+ G
Sbjct: 183 YGFSVDWWALGVLMFEMMAGR 203
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 28/217 (12%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ +I L D
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 582 QSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
R + APE + Y + D+WS G ++ E++T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 65
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGG---EAYFTLGRLQ 524
+D I+RLYDY +++++V E +L + K + ++Y+
Sbjct: 66 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW------ 114
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQS 583
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D + S
Sbjct: 115 ---KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDS 168
Query: 584 R----SYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGEV 618
+ +Y PE I + ++ D+WSLGCIL + G+
Sbjct: 169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G + V A++ H+G V +K++ D Q E+ ++V D +++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM----DLRKQQRRELLFNEVVIMRD-YQHFNVVEM 107
Query: 482 YDYFYHLEHLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL 537
Y + E L+++ E L+ ++ + N+E ++ + L+AL YL
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----------QIATVCEAVLQALAYL 157
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVII 593
H+ G+IH D+K ++IL+ R +K+ D G C Q V + + APEVI
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGR--VKLSDFG-FCAQISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 594 GLPYDQKIDLWSLGCILAELWTGE 617
Y ++D+WSLG ++ E+ GE
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478
+ LG A ++V +L T + +KII K + E+++L + ++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH-----RNV 73
Query: 479 LRLYDYFYHLEHLFIVCELLR-----ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
L L ++F + ++V E +R +++++ + FN+ V+ + A
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS----------VVVQDVASA 123
Query: 534 LEYLHSLGIIHCDLKPENILIK-SYQRCEIKIIDLG----------SSCFQTDNLCLYVQ 582
L++LH+ GI H DLKPENIL + Q +KI D G S T L
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 583 SRSYRAPEVIIGLP-----YDQKIDLWSLGCILAELWTG 616
S Y APEV+ YD++ DLWSLG IL L +G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 438 TGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489
TG+ VC+ +++ D Q E+ ++V D E+ ++ +Y+ + +
Sbjct: 33 TGI-VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN-VVEMYNSYLVGD 90
Query: 490 HLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHC 545
L++V E L ++ + N+E ++ + L+AL LH+ G+IH
Sbjct: 91 ELWVVMEFLEGGALTDIVTHTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHR 140
Query: 546 DLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKI 601
D+K ++IL+ R +K+ D G C Q V + + APE+I LPY ++
Sbjct: 141 DIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 602 DLWSLGCILAELWTGE 617
D+WSLG ++ E+ GE
Sbjct: 198 DIWSLGIMVIEMVDGE 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 438 TGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489
TG+ VC+ +++ D Q E+ ++V D E+ ++ +Y+ + +
Sbjct: 42 TGI-VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN-VVEMYNSYLVGD 99
Query: 490 HLFIVCELLRA----NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHC 545
L++V E L ++ + N+E ++ + L+AL LH+ G+IH
Sbjct: 100 ELWVVMEFLEGGALTDIVTHTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHR 149
Query: 546 DLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKI 601
D+K ++IL+ R +K+ D G C Q V + + APE+I LPY ++
Sbjct: 150 DIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 602 DLWSLGCILAELWTGE 617
D+WSLG ++ E+ GE
Sbjct: 207 DIWSLGIMVIEMVDGE 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + ++I D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMRIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHI 478
LG F+ V Q TG + K +K + D + L EI +L+L K+ P +
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA-KSCP----RV 91
Query: 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY-FTLGRLQ---------VITR 528
+ L++ + + + ++ E +GGE + L L + +
Sbjct: 92 INLHEVYENTSEIILILEY-------------AAGGEIFSLCLPELAEMVSENDVIRLIK 138
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKS-YQRCEIKIIDLGSS--CFQTDNLCLYVQSRS 585
Q LE + YLH I+H DLKP+NIL+ S Y +IKI+D G S L + +
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE 198
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
Y APE++ P D+W++G I L T
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGG---EAYFTLGRLQ 524
+D I+RLYDY +++++V E +L + K + ++Y+
Sbjct: 85 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW------ 133
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLY--- 580
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D +
Sbjct: 134 ---KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDS 187
Query: 581 -VQSRSYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGEV 618
V + +Y PE I + ++ D+WSLGCIL + G+
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 9 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 68
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGG---EAYFTLGRLQ 524
+D I+RLYDY +++++V E +L + K + ++Y+
Sbjct: 69 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW------ 117
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLY--- 580
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D +
Sbjct: 118 ---KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDS 171
Query: 581 -VQSRSYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGE 617
V + +Y PE I + ++ D+WSLGCIL + G+
Sbjct: 172 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDN-----LC 578
I RQ AL YLH+ GI H D+KPEN L + + EIK++D G S ++ +N +
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
Query: 579 LYVQSRSYRAPEVI--IGLPYDQKIDLWSLGCILAELWTGEV 618
+ + APEV+ Y K D WS G +L L G V
Sbjct: 233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV 274
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 16/119 (13%)
Query: 512 SGGEAY--------FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563
+GGE + FT +Q+ + + ALE+LH LGII+ D+K ENIL+ S +
Sbjct: 142 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVV 199
Query: 564 IIDLGSS----CFQTDNLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTG 616
+ D G S +T+ + + Y AP+++ G +D+ +D WSLG ++ EL TG
Sbjct: 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478
+ LG A ++V +L T + +KII K + E+++L + ++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH-----RNV 73
Query: 479 LRLYDYFYHLEHLFIVCELLR-----ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
L L ++F + ++V E +R +++++ + FN+ V+ + A
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS----------VVVQDVASA 123
Query: 534 LEYLHSLGIIHCDLKPENILIK-SYQRCEIKI--IDLGS--------SCFQTDNLCLYVQ 582
L++LH+ GI H DLKPENIL + Q +KI DLGS S T L
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 583 SRSYRAPEVIIGLP-----YDQKIDLWSLGCILAELWTG 616
S Y APEV+ YD++ DLWSLG IL L +G
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 5 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 64
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGG---EAYFTLGRLQ 524
+D I+RLYDY +++++V E +L + K + ++Y+
Sbjct: 65 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW------ 113
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLY--- 580
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D +
Sbjct: 114 ---KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDS 167
Query: 581 -VQSRSYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGE 617
V + +Y PE I + ++ D+WSLGCIL + G+
Sbjct: 168 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 30/225 (13%)
Query: 411 VIAGRYYVTEY--------LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIK 462
I G+ Y E +GS +V++ + TG + +K ++ + + +
Sbjct: 14 TIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMD 73
Query: 463 LLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGR 522
L ++ +D +I++ + F +FI EL+ + +K Q G LG+
Sbjct: 74 LDVVLKSHDCP---YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQ--GPIPERILGK 128
Query: 523 LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ 582
+ V + L L+ H G+IH D+KP NIL+ +R +IK+ D G S D+ +
Sbjct: 129 MTVAIVKALYYLKEKH--GVIHRDVKPSNILLD--ERGQIKLCDFGISGRLVDD---KAK 181
Query: 583 SRS-----YRAPEVI-----IGLPYDQKIDLWSLGCILAELWTGE 617
RS Y APE I YD + D+WSLG L EL TG+
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG F +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 92
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 93 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 206
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLF-IVCELLRANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+ IV + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLL-KLVNKNDPADEH 476
+G +F V+ A+D+ V +K + K + + + E++ L KL + N
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 477 HILRLYDYFYHLEH-LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
LR + + +E+ L +LL + Q+ + +T L+ L
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE-------------IAAVTHGALQGLA 168
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL 595
YLHS +IH D+K NIL+ + +K+ D GS+ +V + + APEVI+ +
Sbjct: 169 YLHSHNMIHRDVKAGNILLS--EPGLVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAM 225
Query: 596 ---PYDQKIDLWSLGCILAEL 613
YD K+D+WSLG EL
Sbjct: 226 DEGQYDGKVDVWSLGITCIEL 246
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 412 IAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVC--LKIIKNDKDFFDQSLDEIKLL-KLV 467
+ GR Y + + +GS SKVFQ + + + + + D D +EI L KL
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ 84
Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGG---EAYFTLGRLQ 524
+D I+RLYDY +++++V E +L + K + ++Y+
Sbjct: 85 QHSD-----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW------ 133
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLY--- 580
+ LEA+ +H GI+H DLKP N LI +K+ID G ++ Q D +
Sbjct: 134 ---KNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDXXXVVKDS 187
Query: 581 -VQSRSYRAPEVIIGLPYDQK-----------IDLWSLGCILAELWTGEV 618
V + +Y PE I + ++ D+WSLGCIL + G+
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG F +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 89
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 90 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 203
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 51/234 (21%)
Query: 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKL 463
+ V + + LG F KV ++ TG +KI+K + KD +L E ++
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 464 LKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEA 516
L+ N P L A Y FQ ++ +GGE
Sbjct: 63 LQ--NSRHP------------------------FLTALKYSFQTHDRLCFVMEYANGGEL 96
Query: 517 YFTLGRLQVITR--------QCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDL 567
+F L R +V + + + AL+YLHS +++ DLK EN+++ + IKI D
Sbjct: 97 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDF 154
Query: 568 G---SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
G + + + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 155 GLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG F +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 146
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 147 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 260
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 51/220 (23%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI+K + KD +L E ++L+ N P
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ--NSRHP----- 70
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITR-- 528
L A Y FQ ++ +GGE +F L R +V +
Sbjct: 71 -------------------FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR 111
Query: 529 ------QCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLC 578
+ + AL+YLHS +++ DLK EN+++ + IKI D G +
Sbjct: 112 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMK 169
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG F +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 87
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ E + NL E+ + + G E + + R
Sbjct: 88 ---KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 201
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 51/220 (23%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI+K + KD +L E ++L+ N P
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ--NSRHP----- 68
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITR-- 528
L A Y FQ ++ +GGE +F L R +V +
Sbjct: 69 -------------------FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR 109
Query: 529 ------QCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLC 578
+ + AL+YLHS +++ DLK EN+++ + IKI D G +
Sbjct: 110 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMK 167
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 422 LGSAAFSKVFQAQDL-------HTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDP 472
LG AF +V A+ + V V +K++K+D D S + E++++K++ K+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-- 100
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR--------- 522
+I+ L L+++ + NL E+ + + G E + + R
Sbjct: 101 ---KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 523 -LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
L T Q +EYL S IH DL N+L+ + +KI D G + +N+ Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLA-RDINNIDYYK 214
Query: 582 QSRSYR------APEVIIGLPYDQKIDLWSLGCILAELWT 615
++ + R APE + Y + D+WS G ++ E++T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG A+ V + + + +G + +K I+ + +Q + L+ L D +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ---KRLLMDLDISMRTVDCPFTVTF 115
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE-AYFTLGRLQVITRQCLEALEYLHS- 539
Y + ++I EL+ +L +F K + G LG++ V ++ALE+LHS
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV---SIVKALEHLHSK 172
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS--RSYRAPEVIIG--- 594
L +IH D+KP N+LI + ++K+ D G S + D++ + + + Y APE I
Sbjct: 173 LSVIHRDVKPSNVLINAL--GQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 595 -LPYDQKIDLWSLGCILAEL 613
Y K D+WSLG + EL
Sbjct: 231 QKGYSVKSDIWSLGITMIEL 250
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 51/220 (23%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI+K + KD +L E ++L+ N P
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ--NSRHP----- 211
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITR-- 528
L A Y FQ ++ +GGE +F L R +V +
Sbjct: 212 -------------------FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR 252
Query: 529 ------QCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLC 578
+ + AL+YLHS +++ DLK EN+++ + IKI D G +
Sbjct: 253 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMK 310
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 350
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 51/220 (23%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH 477
LG F KV ++ TG +KI+K + KD +L E ++L+ N P
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ--NSRHP----- 208
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-------ESGGEAYFTLGRLQVITR-- 528
L A Y FQ ++ +GGE +F L R +V +
Sbjct: 209 -------------------FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR 249
Query: 529 ------QCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLG---SSCFQTDNLC 578
+ + AL+YLHS +++ DLK EN+++ + IKI D G +
Sbjct: 250 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMK 307
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ + Y APEV+ Y + +D W LG ++ E+ G +
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 41/229 (17%)
Query: 403 DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIK 462
D+PI+ ++ RY + +GS F +D T V +K I+ ++DE
Sbjct: 12 DMPIMHDS---DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENV 63
Query: 463 LLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY----- 517
+++N +I+R + HL I+ E SGGE Y
Sbjct: 64 QREIINHRS-LRHPNIVRFKEVILTPTHLAIIMEY-------------ASGGELYERICN 109
Query: 518 ---FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
F+ + +Q L + Y HS+ I H DLK EN L+ +KI D G S
Sbjct: 110 AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS---- 165
Query: 575 DNLCLYVQSRS------YRAPEVIIGLPYDQKI-DLWSLGCILAELWTG 616
+ L+ Q +S Y APEV++ YD KI D+WS G L + G
Sbjct: 166 KSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 7/214 (3%)
Query: 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLK 465
L T G + + E LG+ F V + TG V +K + + ++ EI+++K
Sbjct: 8 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 67
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525
+N + + + + E + +K+ + G ++
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG--DLRKYLNQFENCCGLKEGPIRT 125
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIK-SYQRCEIKIIDLG-SSCFQTDNLCL-YVQ 582
+ AL YLH IIH DLKPENI+++ QR KIIDLG + LC +V
Sbjct: 126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE++ Y +D WS G + E TG
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 7/214 (3%)
Query: 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLK 465
L T G + + E LG+ F V + TG V +K + + ++ EI+++K
Sbjct: 9 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 68
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525
+N + + + + E + +K+ + G ++
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG--DLRKYLNQFENCCGLKEGPIRT 126
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIK-SYQRCEIKIIDLG-SSCFQTDNLCL-YVQ 582
+ AL YLH IIH DLKPENI+++ QR KIIDLG + LC +V
Sbjct: 127 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 186
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ Y APE++ Y +D WS G + E TG
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLL-KLVNKNDPADEH 476
+G +F V+ A+D+ V +K + K + + + E++ L KL + N
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 477 HILRLYDYFYHLEH-LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
LR + + +E+ L +LL + Q+ + +T L+ L
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE-------------IAAVTHGALQGLA 129
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL 595
YLHS +IH D+K NIL+ + +K+ D GS+ +V + + APEVI+ +
Sbjct: 130 YLHSHNMIHRDVKAGNILLS--EPGLVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAM 186
Query: 596 ---PYDQKIDLWSLGCILAEL 613
YD K+D+WSLG EL
Sbjct: 187 DEGQYDGKVDVWSLGITCIEL 207
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 451 KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFN 509
++ + +L E+ +L+ V+ + +I++L D + F+V +L++ L+++
Sbjct: 64 QELREATLKEVDILRKVSGHP-----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-- 116
Query: 510 QESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569
+ + + I R LE + LH L I+H DLKPENIL+ IK+ D G
Sbjct: 117 ----EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGF 170
Query: 570 SCFQTD---NLCLYVQSRSYRAPEVII-----GLP-YDQKIDLWSLGCILAELWTG 616
SC Q D L + SY APE+I P Y +++D+WS G I+ L G
Sbjct: 171 SC-QLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 451 KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFN 509
++ + +L E+ +L+ V+ + +I++L D + F+V +L++ L+++
Sbjct: 64 QELREATLKEVDILRKVSGHP-----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-- 116
Query: 510 QESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569
+ + + I R LE + LH L I+H DLKPENIL+ IK+ D G
Sbjct: 117 ----EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGF 170
Query: 570 SCFQTD---NLCLYVQSRSYRAPEVII-----GLP-YDQKIDLWSLGCILAELWTG 616
SC Q D L + SY APE+I P Y +++D+WS G I+ L G
Sbjct: 171 SC-QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDV-CLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
A ++ +GS +F V++ + H V V LK++ + F +E+ +L+
Sbjct: 35 ASEVMLSTRIGSGSFGTVYKGK-WHGDVAVKILKVVDPTPEQFQAFRNEVAVLR------ 87
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
H + L+ + ++L IV + ++LY+ E F + +L I RQ
Sbjct: 88 -KTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ-----ETKFQMFQLIDIARQT 141
Query: 531 LEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ-----TDNLCLYVQSRS 585
+ ++YLH+ IIH D+K NI + ++ +KI D G + + + + S
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFL--HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 586 YRAPEVII---GLPYDQKIDLWSLGCILAELWTGEV 618
+ APEVI P+ + D++S G +L EL TGE+
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 460 EIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA--NLYEF---QKFNQESGG 514
E+ LLK V+ ++RL D+F + ++ E +L++F + QE
Sbjct: 104 EVVLLKKVSSGFSG----VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA 159
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
++F Q LEA+ + H+ G++H D+K ENILI R E+K+ID GS
Sbjct: 160 RSFFW---------QVLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLK 209
Query: 575 DNLCL-YVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
D + + +R Y PE I Y + +WSLG +L ++ G++
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
Y + E LG AFS V + + KII K + D KL +
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL---SARDHQKLEREARICRLLKH 89
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+I+RL+D ++V +L+ + ++ Y++ Q LE++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGG-----ELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCE---IKIIDLGSSC-FQTDNLCL--YVQSRSYRAP 589
++H I+H DLKPEN+L+ S +C+ +K+ D G + Q + + + Y +P
Sbjct: 145 HIHQHDIVHRDLKPENLLLAS--KCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSP 202
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWTG 616
EV+ PY + +D+W+ G IL L G
Sbjct: 203 EVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 403 DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIK 462
DLPI+ ++ RY + + +GS F +D + V +K I+ + +DE
Sbjct: 10 DLPIMHDS---DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG-----EKIDENV 61
Query: 463 LLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY----- 517
+++N +I+R + HL IV E SGGE +
Sbjct: 62 KREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEY-------------ASGGELFERICN 107
Query: 518 ---FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
F+ + +Q + + Y H++ + H DLK EN L+ +KI D G S
Sbjct: 108 AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS---- 163
Query: 575 DNLCLYVQSRS------YRAPEVIIGLPYDQKI-DLWSLGCILAELWTG 616
+ L+ Q +S Y APEV++ YD K+ D+WS G L + G
Sbjct: 164 KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 41/238 (17%)
Query: 394 NRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF 453
+R DLPI+ ++ RY + + +G+ F +D V +K I+
Sbjct: 2 DRPAVAGPMDLPIMHDS---DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG--- 55
Query: 454 FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
+ +DE +++N +I+R + HL IV E SG
Sbjct: 56 --EKIDENVKREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEY-------------ASG 99
Query: 514 GEAY--------FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565
GE + F+ + +Q + + Y H++ + H DLK EN L+ +KI
Sbjct: 100 GELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIA 159
Query: 566 DLGSSCFQTDNLCLYVQSRS------YRAPEVIIGLPYDQKI-DLWSLGCILAELWTG 616
D G S L+ Q +S Y APEV++ YD K+ D+WS G L + G
Sbjct: 160 DFGYSKAS----VLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 451 KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFN 509
++ + +L E+ +L+ V+ + +I++L D + F+V +L++ L+++
Sbjct: 51 QELREATLKEVDILRKVSGHP-----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-- 103
Query: 510 QESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569
+ + + I R LE + LH L I+H DLKPENIL+ IK+ D G
Sbjct: 104 ----EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGF 157
Query: 570 SCFQTD---NLCLYVQSRSYRAPEVII-----GLP-YDQKIDLWSLGCILAELWTG 616
SC Q D L + SY APE+I P Y +++D+WS G I+ L G
Sbjct: 158 SC-QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNK 469
++AG+Y V + ++ A D + G V LK + + D Q++ + L
Sbjct: 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV 136
Query: 470 NDPADEHHILRLYDYFYHLEHL-----FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
P+ I++++++ H + +IV E + + K + EA L
Sbjct: 137 VHPS----IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYL---- 188
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR 584
+ L AL YLHS+G+++ DLKPENI++ Q +K+IDLG + + ++ +
Sbjct: 189 ---LEILPALSYLHSIGLVYNDLKPENIMLTEEQ---LKLIDLG-AVSRINSFGYLYGTP 241
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
++APE++ P D++++G LA L
Sbjct: 242 GFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 457 SLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEA 516
+L+E ++L+ VN ++ L + + L +V L+ +F ++ G+A
Sbjct: 231 ALNEKQILEKVNS------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM---GQA 281
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
F R + LE LH I++ DLKPENIL+ + I+I DLG + +
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEG 339
Query: 577 LCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ V + Y APEV+ Y D W+LGC+L E+ G+
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG A+ V + + + +G + +K I+ + +Q + L+ L D +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ---KRLLMDLDISMRTVDCPFTVTF 71
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE-AYFTLGRLQVITRQCLEALEYLHS- 539
Y + ++I EL+ +L +F K + G LG++ V ++ALE+LHS
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV---SIVKALEHLHSK 128
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS--RSYRAPEVIIG--- 594
L +IH D+KP N+LI + ++K+ D G S + D++ + + + Y APE I
Sbjct: 129 LSVIHRDVKPSNVLINAL--GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 595 -LPYDQKIDLWSLGCILAEL 613
Y K D+WSLG + EL
Sbjct: 187 QKGYSVKSDIWSLGITMIEL 206
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN----------- 468
E +GS F +VF+A+ G ++ +K + + ++ + + L VN
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGF 77
Query: 469 KNDPADEHHILRLYDY---------FYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
DP L DY + LFI E E ++ ++ GE
Sbjct: 78 DYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE--QWIEKRRGEKLDK 135
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
+ L++ Q + ++Y+HS +IH DLKP NI + ++ +I L +S
Sbjct: 136 VLALELF-EQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 194
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ Y +PE I Y +++DL++LG ILAEL
Sbjct: 195 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 457 SLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEA 516
+L+E ++L+ VN ++ L + + L +V L+ +F ++ G+A
Sbjct: 231 ALNEKQILEKVNS------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM---GQA 281
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
F R + LE LH I++ DLKPENIL+ + I+I DLG + +
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEG 339
Query: 577 LCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ V + Y APEV+ Y D W+LGC+L E+ G+
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 39/218 (17%)
Query: 415 RYYVTE-YLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNK 469
+YY E +G ++ +V A T + K I D D F Q ++ +K L
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL----- 63
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV---- 525
D +I+RLY+ F +++V EL +GGE + + +V
Sbjct: 64 ----DHPNIIRLYETFEDNTDIYLVMELC-------------TGGELFERVVHKRVFRES 106
Query: 526 ----ITRQCLEALEYLHSLGIIHCDLKPENIL-IKSYQRCEIKIIDLG-SSCFQTDNLC- 578
I + L A+ Y H L + H DLKPEN L + +K+ID G ++ F+ +
Sbjct: 107 DAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V + Y +P+V+ GL Y + D WS G ++ L G
Sbjct: 167 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 39/218 (17%)
Query: 415 RYYVTE-YLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNK 469
+YY E +G ++ +V A T + K I D D F Q ++ +K L
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL----- 80
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV---- 525
D +I+RLY+ F +++V EL +GGE + + +V
Sbjct: 81 ----DHPNIIRLYETFEDNTDIYLVMELC-------------TGGELFERVVHKRVFRES 123
Query: 526 ----ITRQCLEALEYLHSLGIIHCDLKPENIL-IKSYQRCEIKIIDLG-SSCFQTDNLC- 578
I + L A+ Y H L + H DLKPEN L + +K+ID G ++ F+ +
Sbjct: 124 DAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V + Y +P+V+ GL Y + D WS G ++ L G
Sbjct: 184 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 394 NRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF 453
+R DLPI+ ++ RY + + +GS F +D + V +K I+ +
Sbjct: 2 DRPAVSGPMDLPIMHDS---DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI 58
Query: 454 FDQSLDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQES 512
EI N + H +I+R + HL IV E S
Sbjct: 59 AANVKREII-------NHRSLRHPNIVRFKEVILTPTHLAIVMEY-------------AS 98
Query: 513 GGEAY--------FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564
GGE + F+ + +Q + + Y H++ + H DLK EN L+ +KI
Sbjct: 99 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 565 IDLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKI-DLWSLGCILAELWTG 616
D G SS + V + +Y APEV++ YD K+ D+WS G L + G
Sbjct: 159 CDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + FN
Sbjct: 89 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+I+RL + + I+ E + KF +E GE F++ +L + R ++
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENG--ALDKFLREKDGE--FSVLQLVGMLRGIAAGMK 161
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS-----YRAP 589
YL ++ +H DL NIL+ S C K+ D G S + D Y S + AP
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVC--KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 590 EVIIGLPYDQKIDLWSLGCILAELWT 615
E I + D+WS G ++ E+ T
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK-IIKNDKDFFDQSLDEIKLLKLV----NK 469
R V L F+ V++AQD+ +G + LK ++ N+++ + E+ +K + N
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
I + E L + EL + L EF K + G + T+ L++ +
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLT-ELCKGQLVEFLKKMESRGPLSCDTV--LKIFYQT 145
Query: 530 CLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT--DNLCLYVQSRS 585
C A++++H IIH DLK EN+L+ + + IK+ D GS+ + + Q R+
Sbjct: 146 C-RAVQHMHRQKPPIIHRDLKVENLLLSN--QGTIKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 586 -------------YRAPEVI---IGLPYDQKIDLWSLGCIL 610
YR PE+I P +K D+W+LGCIL
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 35/235 (14%)
Query: 394 NRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF 453
+R DLPI+ ++ RY + + +GS F +D + V +K I+
Sbjct: 2 DRPAVSGPMDLPIMHDS---DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--- 55
Query: 454 FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
+ +DE +++N +I+R + HL IV E SG
Sbjct: 56 --EKIDENVKREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEY-------------ASG 99
Query: 514 GEAY--------FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565
GE + F+ + +Q + + Y H++ + H DLK EN L+ +KI
Sbjct: 100 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKIC 159
Query: 566 DLG---SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKI-DLWSLGCILAELWTG 616
G SS + V + +Y APEV++ YD K+ D+WS G L + G
Sbjct: 160 AFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
L I N +I ++ LG KV Q + T LK++++ ++ E++L
Sbjct: 8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVEL 63
Query: 464 LKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFT 519
++ HI+R+ D + +L + L IV E L E Q+ G +A FT
Sbjct: 64 HWRASQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQA-FT 115
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI-KIIDLGSSCFQTDNLC 578
I + EA++YLHS+ I H D+KPEN+L S + I K+ D G + T
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171
Query: 579 LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
G YD+ D+WSLG I+ L G
Sbjct: 172 ---------------GEKYDKSCDMWSLGVIMYILLCG 194
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G A+ V + +G + +K I++ D +Q + L+ L +D +I++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ---KQLLMDLDVVMRSSDCPYIVQF 86
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF--TLGRLQVITRQCLEALEYLHS 539
Y + +I EL+ + +F K+ + LG++ + T + L L+ +
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK--EN 144
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS--RSYRAPEVIIGLP- 596
L IIH D+KP NIL+ + IK+ D G S D++ + R Y APE I
Sbjct: 145 LKIIHRDIKPSNILLD--RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 597 ---YDQKIDLWSLGCILAELWTGE 617
YD + D+WSLG L EL TG
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGR 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDV-CLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
G+ V + +GS +F V++ + H V V L + +E+ +L+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK-WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR------- 75
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
H + L+ + L IV + + ++ E F + +L I RQ
Sbjct: 76 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTAR 131
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG--------SSCFQTDNLCLYVQSR 584
++YLH+ IIH DLK NI + ++ +KI D G S Q + L S
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFL--HEDNTVKIGDFGLATEKSRWSGSHQFEQLS---GSI 186
Query: 585 SYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEV 618
+ APEVI PY + D+++ G +L EL TG++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG F KV +A H V +K++K + + L E +LK VN
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN------ 84
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQ--------------ESGGE 515
H+++LY L ++ E LR L E +K + E
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 516 AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575
T+G L Q + ++YL + ++H DL NIL+ ++ +I L ++ D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 576 NLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ Q R + A E + Y + D+WS G +L E+ T
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F +V+ + V +K +K L+E L+K + + ++RL
Sbjct: 21 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD------KLVRL 73
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++I+ E + + +L +F K + GG+ L +L + Q E + Y+
Sbjct: 74 YAVVTREEPIYIITEYMAKGSLLDFLK--SDEGGKV--LLPKLIDFSAQIAEGMAYIERK 129
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
IH DL+ N+L+ C KI D G + DN + + APE I
Sbjct: 130 NYIHRDLRAANVLVSESLMC--KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L E+ T
Sbjct: 188 FTIKSDVWSFGILLYEIVT 206
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 51/220 (23%)
Query: 423 GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482
G+ F FQ + V V +I DF D +L EIKLL + D +++R Y
Sbjct: 29 GTVVFQGSFQGR----PVAVKRMLI----DFCDIALMEIKLL-----TESDDHPNVIRYY 75
Query: 483 DYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ------VITRQCLEALEY 536
L+I EL NL + + S +LQ + RQ + +
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENL-----KLQKEYNPISLLRQIASGVAH 130
Query: 537 LHSLGIIHCDLKPENILIKSYQRCEI-------------------KIIDLGSSCFQTDNL 577
LHSL IIH DLKP+NIL+ + R K +D G S F+T NL
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT-NL 189
Query: 578 CLYVQSRSYRAPEVI-------IGLPYDQKIDLWSLGCIL 610
+ +RAPE++ + ID++S+GC+
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 478 ILRLYDYFYHLEHLFIVCELL-----RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
++ L+ F E +F+V +LL R +L + F +E+ +++ + +
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET----------VKLFICELVM 126
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVI 592
AL+YL + IIH D+KP+NIL+ + I ++ + + + ++ Y APE+
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186
Query: 593 I---GLPYDQKIDLWSLGCILAELWTG 616
G Y +D WSLG EL G
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDV-CLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
G+ V + +GS +F V++ + H V V L + +E+ +L+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK-WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR------- 75
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
H + L+ + L IV + + ++ E F + +L I RQ
Sbjct: 76 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTAR 131
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG--------SSCFQTDNLCLYVQSR 584
++YLH+ IIH DLK NI + ++ +KI D G S Q + L S
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFL--HEDNTVKIGDFGLATEKSRWSGSHQFEQLS---GSI 186
Query: 585 SYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEV 618
+ APEVI PY + D+++ G +L EL TG++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 41/238 (17%)
Query: 394 NRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF 453
+R DLPI+ ++ RY + + +GS F +D + V +K I+
Sbjct: 2 DRPAVSGPMDLPIMHDS---DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--- 55
Query: 454 FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
+ +DE +++N +I+R + HL IV E SG
Sbjct: 56 --EKIDENVKREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEY-------------ASG 99
Query: 514 GEAY--------FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565
GE + F+ + +Q + + Y H++ + H DLK EN L+ +KI
Sbjct: 100 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKIC 159
Query: 566 DLGSSCFQTDNLCLYVQSR------SYRAPEVIIGLPYDQKI-DLWSLGCILAELWTG 616
G S + L+ Q + +Y APEV++ YD K+ D+WS G L + G
Sbjct: 160 AFGYS----KSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG F KV +A H V +K++K + + L E +LK VN
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN------ 84
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQ--------------ESGGE 515
H+++LY L ++ E LR L E +K + E
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 516 AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575
T+G L Q + ++YL + ++H DL NIL+ ++ +I L ++ D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 576 NLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ Q R + A E + Y + D+WS G +L E+ T
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDV-CLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
G+ V + +GS +F V++ + H V V L + +E+ +L+
Sbjct: 12 GQITVGQRIGSGSFGTVYKGK-WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR------- 63
Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
H + L+ + L IV + + ++ E F + +L I RQ
Sbjct: 64 KTRHVNILLFMGYSTKPQLAIVTQWCEGS----SLYHHLHASETKFEMKKLIDIARQTAR 119
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG--------SSCFQTDNLCLYVQSR 584
++YLH+ IIH DLK NI + ++ +KI D G S Q + L S
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFL--HEDNTVKIGDFGLATVKSRWSGSHQFEQLS---GSI 174
Query: 585 SYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEV 618
+ APEVI PY + D+++ G +L EL TG++
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG F KV +A H V +K++K + + L E +LK VN
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN------ 84
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQ--------------ESGGE 515
H+++LY L ++ E LR L E +K + E
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 516 AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575
T+G L Q + ++YL + ++H DL NIL+ ++ +I L ++ D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 576 NLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ Q R + A E + Y + D+WS G +L E+ T
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS----CFQTDNLCLYVQ 582
T Q + LE+LH II+ DLKPEN+L+ ++I DLG + QT Y
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQTKTKG-YAG 351
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE+++G YD +D ++LG L E+
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS----CFQTDNLCLYVQ 582
T Q + LE+LH II+ DLKPEN+L+ ++I DLG + QT Y
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQTKTKG-YAG 351
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE+++G YD +D ++LG L E+
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F +V+ + V +K +K L+E L+K + + ++RL
Sbjct: 20 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD------KLVRL 72
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++I+ E + + +L +F K + GG+ L +L + Q E + Y+
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLK--SDEGGKV--LLPKLIDFSAQIAEGMAYIERK 128
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
IH DL+ N+L+ C KI D G + DN + + APE I
Sbjct: 129 NYIHRDLRAANVLVSESLMC--KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K ++WS G +L E+ T
Sbjct: 187 FTIKSNVWSFGILLYEIVT 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS----CFQTDNLCLYVQ 582
T Q + LE+LH II+ DLKPEN+L+ ++I DLG + QT Y
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQTKTKG-YAG 351
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE+++G YD +D ++LG L E+
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 25 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 76
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 77 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 131
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 132 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 189
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 26 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 77
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 78 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 132
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 89 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 32/213 (15%)
Query: 420 EYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH-H 477
E LG F + + TG V V ++I+ D++ L E+K+++ + EH +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-------EHPN 68
Query: 478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL 537
+L+ Y + L + E ++ + +S + + + + YL
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYL 124
Query: 538 HSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------------ 585
HS+ IIH DL N L++ + + + D G + D RS
Sbjct: 125 HSMNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ APE+I G YD+K+D++S G +L E+
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 130 MIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 68
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 123
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
++ E +GS F VF+ +D C+ IK K S+DE L+ V + +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKR---LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 476 H-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
H H++R + + +H+ I E ++ +YF L+ + Q L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLA-DAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 535 EYLHSLGIIHCDLKPENILI 554
Y+HS+ ++H D+KP NI I
Sbjct: 129 RYIHSMSLVHMDIKPSNIFI 148
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 80
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 81 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 89 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 77
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 78 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 417 YVTEY-----LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
Y TE+ +GS F VF+ +D C+ IK K S+DE L+ V +
Sbjct: 7 YTTEFHELEKIGSGEFGSVFKCVKR---LDGCIYAIKRSKKPLAGSVDEQNALREVYAHA 63
Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
+H H++R + + +H+ I E ++ +YF L+ + Q
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA-DAISENYRIMSYFKEAELKDLLLQV 122
Query: 531 LEALEYLHSLGIIHCDLKPENILI 554
L Y+HS+ ++H D+KP NI I
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
E +GS F +VF+A+ G +K +K + + ++ + K + K D + H
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREV------KALAKLDHVNIVHYN 70
Query: 480 RLYDYF-YHLEH------------LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVI 526
+D F Y E LFI E E ++ ++ GE + L++
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE--QWIEKRRGEKLDKVLALELF 128
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSY 586
Q + ++Y+HS +I+ DLKP NI + ++ +I L +S + Y
Sbjct: 129 -EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I Y +++DL++LG ILAEL
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 19 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 70
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 71 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 125
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS----CFQTDNLCLYVQ 582
T Q + LE+LH II+ DLKPEN+L+ ++I DLG + QT Y
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQTKTKG-YAG 351
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE+++G YD +D ++LG L E+
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 68
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 123
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 18 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 69
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 70 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 124
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 125 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVT 206
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 81
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 82 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LC 578
Q Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLN 164
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE++ + + +D+WS G +L + GE+
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 74
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 129
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 187
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
++ E +GS F VF+ +D C+ IK K S+DE L+ V + +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKR---LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 476 H-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
H H++R + + +H+ I E ++ +YF L+ + Q L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLA-DAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 535 EYLHSLGIIHCDLKPENILI 554
Y+HS+ ++H D+KP NI I
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 27 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 78
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 79 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 133
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 134 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 191
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 12 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 63
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 118
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 119 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 176
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVT 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 422 LGSAAFSKVFQAQ--DLHTGVDVCLKIIKNDKDFFDQSLD----EIKLLKLVNKNDPADE 475
LG AF KVF A+ +L D L +K K+ + + E +LL ++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ------H 102
Query: 476 HHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQE-----SGGE----AYFTLGRLQV 525
HI+R + L +V E +R +L F + + +GGE LG+L
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQS 583
+ Q + YL L +H DL N L+ Q +KI D G S + TD V
Sbjct: 163 VASQVAAGMVYLAGLHFVHRDLATRNCLVG--QGLVVKIGDFGMSRDIYSTDY--YRVGG 218
Query: 584 RS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
R+ + PE I+ + + D+WS G +L E++T
Sbjct: 219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 417 YVTEY-----LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
Y TE+ +GS F VF+ +D C+ IK K S+DE L+ V +
Sbjct: 5 YTTEFHELEKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA 61
Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQC 530
+H H++R + + +H+ I E ++ +YF L+ + Q
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA-DAISENYRIMSYFKEAELKDLLLQV 120
Query: 531 LEALEYLHSLGIIHCDLKPENILI 554
L Y+HS+ ++H D+KP NI I
Sbjct: 121 GRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 41/228 (17%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLK-IIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
Y + LG FS V + LH G LK I+ +++ +++ E + +L N +
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPN--- 87
Query: 475 EHHILRLYDYFYH-----LEHLFIVCELLRANLY-EFQKFNQESGGEAYFTLGRLQVITR 528
ILRL Y E ++ R L+ E ++ + + T ++ +
Sbjct: 88 ---ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN---FLTEDQILWLLL 141
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQ-SR--- 584
LE +H+ G H DLKP NIL+ + ++DLGS + C++V+ SR
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGD--EGQPVLMDLGS----MNQACIHVEGSRQAL 195
Query: 585 ------------SYRAPEVIIGLPY---DQKIDLWSLGCILAELWTGE 617
SYRAPE+ + D++ D+WSLGC+L + GE
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 89 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 275 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 327
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L + Q + Y+ +
Sbjct: 328 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GETG--KYLRLPQLVDMAAQIASGMAYVERM 382
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 383 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 440
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 441 FTIKSDVWSFGILLTELTT 459
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 111 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKNDKDFFDQS--LDEIKLLK 465
R + + LG AF +V A+ + D V +K++K+D D S + E++++K
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGG 514
++ K+ +I+ L L+++ E + NL E+ + +N
Sbjct: 74 MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
E + L Q +EYL S IH DL N+L+ +I L
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 575 DNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D R + APE + Y + D+WS G +L E++T
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LC 578
Q Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLN 164
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE++ + + +D+WS G +L + GE+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 74
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 129
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 187
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LC 578
Q Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLN 165
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE++ + + +D+WS G +L + GE+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK---IIKNDKDFFDQSLDEIKLLKLVNKND 471
+Y + +G +F K + G +K I + ++S E+ +L N
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL--ANMKH 82
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
P +I++ + F L+IV + F++ N + G F ++ Q
Sbjct: 83 P----NIVQYRESFEENGSLYIVMDYCEGGDL-FKRINAQKG--VLFQEDQILDWFVQIC 135
Query: 532 EALEYLHSLGIIHCDLKPENILIK---SYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRA 588
AL+++H I+H D+K +NI + + Q + I + +S + C + + Y +
Sbjct: 136 LALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC--IGTPYYLS 193
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE+ PY+ K D+W+LGC+L EL T
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 47/216 (21%)
Query: 423 GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482
G+ F FQ + V V +I DF D +L EIKLL + D +++R Y
Sbjct: 47 GTVVFQGSFQGRP----VAVKRMLI----DFCDIALMEIKLL-----TESDDHPNVIRYY 93
Query: 483 DYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ------VITRQCLEALEY 536
L+I EL NL + + S +LQ + RQ + +
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENL-----KLQKEYNPISLLRQIASGVAH 148
Query: 537 LHSLGIIHCDLKPENILIKSYQR-----------CEIKIIDLGSSCFQTD--------NL 577
LHSL IIH DLKP+NIL+ + R I I D G C + D NL
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG-LCKKLDSGQXXFRXNL 207
Query: 578 CLYVQSRSYRAPEVI---IGLPYDQKIDLWSLGCIL 610
+ +RAPE++ + ID++S+GC+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 22 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 73
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 74 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 128
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 68
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 123
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + DN + + APE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LC 578
Q Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLN 164
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE++ + + +D+WS G +L + GE+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LCLYVQS 583
Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L +
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 584 RSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
Y APE++ + + +D+WS G +L + GE+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LC 578
Q Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLN 164
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE++ + + +D+WS G +L + GE+
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 47/216 (21%)
Query: 423 GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482
G+ F FQ + V V +I DF D +L EIKLL + D +++R Y
Sbjct: 47 GTVVFQGSFQGRP----VAVKRMLI----DFCDIALMEIKLL-----TESDDHPNVIRYY 93
Query: 483 DYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ------VITRQCLEALEY 536
L+I EL NL + + S +LQ + RQ + +
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENL-----KLQKEYNPISLLRQIASGVAH 148
Query: 537 LHSLGIIHCDLKPENILIKSYQR-----------CEIKIIDLGSSCFQTD--------NL 577
LHSL IIH DLKP+NIL+ + R I I D G C + D NL
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG-LCKKLDSGQXXFRXNL 207
Query: 578 CLYVQSRSYRAPEVI---IGLPYDQKIDLWSLGCIL 610
+ +RAPE++ + ID++S+GC+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN----LC 578
Q Q + + YLH +GI H D+KPEN+L+ +R +KI D G ++ F+ +N L
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYNNRERLLN 165
Query: 579 LYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEV 618
+ Y APE++ + + +D+WS G +L + GE+
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IVCE + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVCEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+ E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLD 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+++RLY + +V EL L + L +K + +F LG L Q E
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAE 132
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRA 588
+ YL S IH DL N+L+ + +I L + Q D+ + + R ++ A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + D W G L E++T
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY-----V 581
T + + AL+ +HS+G+IH D+KP+N+L+ + +K+ D G +C + D + V
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKH--GHLKLADFG-TCMKMDETGMVHCDTAV 236
Query: 582 QSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEV 618
+ Y +PEV+ Y ++ D WS+G L E+ G+
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT 277
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATEKS 183
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 184 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 183
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 184 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 422 LGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
LG+ F +V+ A + HT V +K +K + L E ++K + + H ++
Sbjct: 196 LGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV- 252
Query: 481 LYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
E ++I+ E + + +L +F K ++ S L +L + Q E + ++
Sbjct: 253 ------TKEPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIEQ 302
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGL 595
IH DL+ NIL+ + C KI D G + DN + + APE I
Sbjct: 303 RNYIHRDLRAANILVSASLVC--KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 596 PYDQKIDLWSLGCILAELWT 615
+ K D+WS G +L E+ T
Sbjct: 361 SFTIKSDVWSFGILLMEIVT 380
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 125 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 182
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 183 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 234
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+ E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLD 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+++RLY + +V EL L + L +K + +F LG L Q E
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAE 132
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRA 588
+ YL S IH DL N+L+ + +I L + Q D+ + + R ++ A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + D W G L E++T
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 118 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATEKS 175
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 176 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 103 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 160
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 161 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 520 LGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578
LG++ V ++ALE+LHS L +IH D+KP N+LI + ++K D G S + D++
Sbjct: 138 LGKIAV---SIVKALEHLHSKLSVIHRDVKPSNVLINAL--GQVKXCDFGISGYLVDDVA 192
Query: 579 LYVQS--RSYRAPEVIIG----LPYDQKIDLWSLGCILAEL 613
+ + + Y APE I Y K D+WSLG EL
Sbjct: 193 KDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 422 LGSAAFSKVFQAQ--DLHTGVDVCLKIIKNDKDFFDQSLD----EIKLLKLVNKNDPADE 475
LG AF KVF A+ +L D L +K K+ + + E +LL ++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ------H 73
Query: 476 HHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQE-----SGGE----AYFTLGRLQV 525
HI+R + L +V E +R +L F + + +GGE LG+L
Sbjct: 74 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQS 583
+ Q + YL L +H DL N L+ Q +KI D G S + TD V
Sbjct: 134 VASQVAAGMVYLAGLHFVHRDLATRNCLVG--QGLVVKIGDFGMSRDIYSTDY--YRVGG 189
Query: 584 RS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
R+ + PE I+ + + D+WS G +L E++T
Sbjct: 190 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 103 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 160
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 161 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATEKS 155
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 156 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-------KNDKDFFDQSLDEIKLLKLVN 468
Y V + +G AF +V + T +K++ ++D FF + D +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
A+ +++L+ F +L++V E + N S + R T
Sbjct: 131 ----ANSPWVVQLFYAFQDDRYLYMVMEYMPGG----DLVNLMSNYDVPEKWARF--YTA 180
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY-----VQS 583
+ + AL+ +HS+G IH D+KP+N+L+ + +K+ D G +C + + + V +
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFG-TCMKMNKEGMVRCDTAVGT 237
Query: 584 RSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEV 618
Y +PEV+ Y ++ D WS+G L E+ G+
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-------KNDKDFFDQSLDEIKLLKLVN 468
Y V + +G AF +V + T +K++ ++D FF + D +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 125
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
A+ +++L+ F +L++V E + N S + R T
Sbjct: 126 ----ANSPWVVQLFYAFQDDRYLYMVMEYMPGG----DLVNLMSNYDVPEKWARF--YTA 175
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY-----VQS 583
+ + AL+ +HS+G IH D+KP+N+L+ + +K+ D G +C + + + V +
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFG-TCMKMNKEGMVRCDTAVGT 232
Query: 584 RSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEV 618
Y +PEV+ Y ++ D WS+G L E+ G+
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 100 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 157
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 158 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 155
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 156 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG------ 568
E F + +L I RQ + ++YLH+ IIH DLK NI + ++ +KI D G
Sbjct: 98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL--HEDLTVKIGDFGLATVKS 155
Query: 569 --SSCFQTDNLCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEV 618
S Q + L S + APEVI PY + D+++ G +L EL TG++
Sbjct: 156 RWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ F +V+ + HT V V K +K D L E L+K +
Sbjct: 13 LVERLGAGQFGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 64
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 119
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH +L+ NIL+ C KI D G + DN + + APE
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSC--KIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 177
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVT 201
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 420 EYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHR 75
Query: 477 HILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+++RLY + +V EL L + L +K + +F LG L Q E +
Sbjct: 76 NLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAEGM 128
Query: 535 EYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPE 590
YL S IH DL N+L+ + +I L + Q D+ + + R ++ APE
Sbjct: 129 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 591 VIIGLPYDQKIDLWSLGCILAELWT 615
+ + D W G L E++T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-------KNDKDFFDQSLDEIKLLKLVN 468
Y V + +G AF +V + T +K++ ++D FF + D +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
A+ +++L+ F +L++V E + N S + R T
Sbjct: 131 ----ANSPWVVQLFYAFQDDRYLYMVMEYMPGG----DLVNLMSNYDVPEKWARF--YTA 180
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLY-----VQS 583
+ + AL+ +HS+G IH D+KP+N+L+ + +K+ D G +C + + + V +
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFG-TCMKMNKEGMVRCDTAVGT 237
Query: 584 RSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEV 618
Y +PEV+ Y ++ D WS+G L E+ G+
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 75
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L ++ Q + Y+ +
Sbjct: 76 YAVVSE-EPIYIVTEYMNKGSLLDFLK--GETG--KYLRLPQLVDMSAQIASGMAYVERM 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 131 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 189 FTIKSDVWSFGILLTELTT 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 422 LGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
LG+ F +V+ A + HT V V K +K + L E ++K + + H ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAV--KTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV- 79
Query: 481 LYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
E ++I+ E + + +L +F K ++ S L +L + Q E + ++
Sbjct: 80 ------TKEPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIEQ 129
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGL 595
IH DL+ NIL+ + C KI D G + DN + + APE I
Sbjct: 130 RNYIHRDLRAANILVSASLVC--KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 596 PYDQKIDLWSLGCILAELWT 615
+ K D+WS G +L E+ T
Sbjct: 188 SFTIKSDVWSFGILLMEIVT 207
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 422 LGSAAFSKVFQAQ--DLHTGVDVCLKIIKNDKDFFDQSLD----EIKLLKLVNKNDPADE 475
LG AF KVF A+ +L D L +K K+ + + E +LL ++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ------H 79
Query: 476 HHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQE-----SGGE----AYFTLGRLQV 525
HI+R + L +V E +R +L F + + +GGE LG+L
Sbjct: 80 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQS 583
+ Q + YL L +H DL N L+ Q +KI D G S + TD V
Sbjct: 140 VASQVAAGMVYLAGLHFVHRDLATRNCLVG--QGLVVKIGDFGMSRDIYSTDY--YRVGG 195
Query: 584 RS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
R+ + PE I+ + + D+WS G +L E++T
Sbjct: 196 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHI-LR 480
LG ++ +VF+ + G L +K F D + L V ++ +H +R
Sbjct: 65 LGHGSYGEVFKVRSKEDGR---LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR 121
Query: 481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
L + L++ EL +L + + S EA ++ R L AL +LHS
Sbjct: 122 LEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEA-----QVWGYLRDTLLALAHLHSQ 176
Query: 541 GIIHCDLKPENILIKSYQRCEIK----IIDLGSSCFQTDNLCLYVQS--RSYRAPEVIIG 594
G++H D+KP NI + RC++ +++LG++ VQ Y APE++ G
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE------VQEGDPRYMAPELLQG 230
Query: 595 LPYDQKIDLWSLGCILAEL 613
Y D++SLG + E+
Sbjct: 231 -SYGTAADVFSLGLTILEV 248
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+ E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLD 69
Query: 475 EHHILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+++RLY + +V EL L + L +K + +F LG L Q E
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAE 122
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRA 588
+ YL S IH DL N+L+ + +I L + Q D+ + + R ++ A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + D W G L E++T
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 39/223 (17%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLK-----LVNKN 470
+ + + +G AFS+V + TG +KI+ N D + E+ + LVN
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM-NKWDMLKRG--EVSCFREERDVLVN-- 117
Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGE-AYFTLGRLQVIT 527
D I +L+ F +L++V E L KF + E A F L
Sbjct: 118 --GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA------ 169
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGSSCFQ-----TDNLCLYV 581
+ + A++ +H LG +H D+KP+NIL+ RC I++ D G SC + T + V
Sbjct: 170 -EIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFG-SCLKLRADGTVRSLVAV 224
Query: 582 QSRSYRAPEVIIGLPYDQ-------KIDLWSLGCILAELWTGE 617
+ Y +PE++ + + D W+LG E++ G+
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+ E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLD 73
Query: 475 EHHILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+++RLY + +V EL L + L +K + +F LG L Q E
Sbjct: 74 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAE 126
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRA 588
+ YL S IH DL N+L+ + +I L + Q D+ + + R ++ A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + D W G L E++T
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+ E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLD 69
Query: 475 EHHILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+++RLY + +V EL L + L +K + +F LG L Q E
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAE 122
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRA 588
+ YL S IH DL N+L+ + +I L + Q D+ + + R ++ A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + D W G L E++T
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 75
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L ++ Q + Y+ +
Sbjct: 76 YAVVSE-EPIYIVTEYMNKGSLLDFLK--GETG--KYLRLPQLVDMSAQIASGMAYVERM 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 131 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 189 FTIKSDVWSFGILLTELTT 207
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 244
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L + Q + Y+ +
Sbjct: 245 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GETG--KYLRLPQLVDMAAQIASGMAYVERM 299
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 300 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 358 FTIKSDVWSFGILLTELTT 376
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F +V+ + V +K +K + L+E +++K + K+D +++L
Sbjct: 17 LGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL-KHD-----KLVQL 69
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K + G A L L + Q + Y+ +
Sbjct: 70 YAVVSE-EPIYIVTEYMNKGSLLDFLK---DGEGRA-LKLPNLVDMAAQVAAGMAYIERM 124
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS----YRAPEVIIGLP 596
IH DL+ NIL+ + C KI D G + DN Q + APE +
Sbjct: 125 NYIHRDLRSANILVGNGLIC--KIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 182
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 183 FTIKSDVWSFGILLTELVT 201
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTG--VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
+ E LG +F V + + D +G V V +K +K D +++D+ ++ VN D
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLD 69
Query: 475 EHHILRLYDYFYHLEHLFIVCEL--LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
+++RLY + +V EL L + L +K + +F LG L Q E
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKH------QGHFLLGTLSRYAVQVAE 122
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRA 588
+ YL S IH DL N+L+ + +I L + Q D+ + + R ++ A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + D W G L E++T
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 244
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L + Q + Y+ +
Sbjct: 245 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GETG--KYLRLPQLVDMAAQIASGMAYVERM 299
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 300 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 358 FTIKSDVWSFGILLTELTT 376
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-------LCLY- 580
Q EA+E+LHS G++H DLKP NI ++ L ++ Q + + Y
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 581 -----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
V ++ Y +PE I G Y K+D++SLG IL EL
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 51/220 (23%)
Query: 423 GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482
G+ F FQ + V V +I DF D +L EIKLL + D +++R Y
Sbjct: 29 GTVVFQGSFQGR----PVAVKRMLI----DFCDIALMEIKLL-----TESDDHPNVIRYY 75
Query: 483 DYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ------VITRQCLEALEY 536
L+I EL NL + + S +LQ + RQ + +
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENL-----KLQKEYNPISLLRQIASGVAH 130
Query: 537 LHSLGIIHCDLKPENILIKSYQR-----------CEIKIIDLGSSCFQTD--------NL 577
LHSL IIH DLKP+NIL+ + R I I D G C + D NL
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG-LCKKLDSGQXXFRXNL 189
Query: 578 CLYVQSRSYRAPEVI-------IGLPYDQKIDLWSLGCIL 610
+ +RAPE++ + ID++S+GC+
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-------LCLY- 580
Q EA+E+LHS G++H DLKP NI ++ L ++ Q + + Y
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 581 -----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
V ++ Y +PE I G Y K+D++SLG IL EL
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 129
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 244
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L + Q + Y+ +
Sbjct: 245 YAVVSE-EPIYIVGEYMSKGSLLDFLK--GETG--KYLRLPQLVDMAAQIASGMAYVERM 299
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 300 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 358 FTIKSDVWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 19 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 71
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E+G Y L +L + Q + Y+ +
Sbjct: 72 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GETG--KYLRLPQLVDMAAQIASGMAYVERM 126
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 127 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 185 FTIKSDVWSFGILLTELTT 203
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 146
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEV 231
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS-----YR 587
++YL +G +H DL NILI S C++ LG + D Y +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG-RVLEDDPEAAYTTRGGKIPIRWT 217
Query: 588 APEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 156
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 214
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 215 TSPEAIAYRKFTSASDVWSYGIVLWEV 241
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 129
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEV 214
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
+ ++ + +GS +F +++ ++ T +V +K+ +N K Q L E K+ +++
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-ENVKTKHPQLLYESKIYRILQGGT 63
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I + + ++ +V +LL +L + F +L + ++ Q +
Sbjct: 64 -----GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK-----LSLKTVLMLADQMI 113
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLG-------SSCFQ----TDNLCL 579
+E++HS +H D+KP+N L+ +R ++ IID G +S Q +N L
Sbjct: 114 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNL 173
Query: 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+R Y + +G+ ++ DL SLG +L G +
Sbjct: 174 TGTAR-YASVNTHLGIEQSRRDDLESLGYVLMYFLRGSL 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 193 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLR------HEKLVQL 245
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 246 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 300
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G DN Q + APE +
Sbjct: 301 NYVHRDLRAANILVGENLVC--KVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 359 FTIKSDVWSFGILLTELTT 377
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVIEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+RL + + IV E + +L F + + +A FT+ +L + R
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-----DAQFTVIQLVGMLRGIAS 158
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G + D+ +R +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLARVLEDDPEAAYTTRGGKIPIRW 216
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
+PE I + D+WS G +L E+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEV 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 33/216 (15%)
Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----FFDQSLDEIKLLKLVNKNDPAD 474
E +G F KV++A G +V +K ++D D + E KL ++
Sbjct: 13 EIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK------ 64
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL 534
+I+ L +L +V E R N+ G+ L Q +
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGG-----PLNRVLSGK-RIPPDILVNWAVQIARGM 118
Query: 535 EYLHS---LGIIHCDLKPENILIKSYQRCE--------IKIIDLG-SSCFQTDNLCLYVQ 582
YLH + IIH DLK NILI Q+ E +KI D G + +
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILI--LQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG 176
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
+ ++ APEVI + + D+WS G +L EL TGEV
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 16 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 68
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E + IV E + + +L +F K E+G Y L +L + Q + Y+ +
Sbjct: 69 YAVVSE-EPIXIVTEYMSKGSLLDFLK--GETG--KYLRLPQLVDMAAQIASGMAYVERM 123
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 124 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 182 FTIKSDVWSFGILLTELTT 200
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 17 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 69
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 70 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 124
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 125 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 183 FTIKSDVWSFGILLTELTT 201
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 422 LGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
LG+ F +V+ A + HT V +K +K + L E ++K + + H ++
Sbjct: 190 LGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 481 LYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
E ++I+ E + + +L +F K ++ S L +L + Q E + ++
Sbjct: 248 K-------EPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIEQ 296
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQ 599
IH DL+ NIL+ + C KI D G + + APE I +
Sbjct: 297 RNYIHRDLRAANILVSASLVC--KIADFGLARVGAKFPI------KWTAPEAINFGSFTI 348
Query: 600 KIDLWSLGCILAELWT 615
K D+WS G +L E+ T
Sbjct: 349 KSDVWSFGILLMEIVT 364
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVIEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 15 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 67
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 68 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 122
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 123 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 181 FTIKSDVWSFGILLTELTT 199
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCL------KIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
+G +F V++ D T V+V K+ K+++ F + + +K L+ N
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN------- 86
Query: 476 HHILRLYDYFYHL----EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVIT--- 527
I+R YD + + + +V EL + L + K F + +++V+
Sbjct: 87 --IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK---------RFKVXKIKVLRSWC 135
Query: 528 RQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-LYVQSR 584
RQ L+ L++LH+ IIH DLK +NI I + +KI DLG + + + + +
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFI-TGPTGSVKIGDLGLATLKRASFAKAVIGTP 194
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWTGE 617
+ APE YD+ +D+++ G E T E
Sbjct: 195 EFXAPEX-YEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 69
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------YRAPEVIIGL 595
+H DL N L+ + +K+ D G S + D+ Y SR + PEV++
Sbjct: 126 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDD--EYTSSRGSKFPVRWSPPEVLMYS 181
Query: 596 PYDQKIDLWSLGCILAELWT 615
+ K D+W+ G ++ E+++
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 523 LQVITRQCLEALEYLHSLG-----IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577
L+V+T+ L AL+ H ++H DLKP N+ + Q +K+ D G + +
Sbjct: 114 LRVMTQLTL-ALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDT 170
Query: 578 CL---YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+V + Y +PE + + Y++K D+WSLGC+L EL
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 523 LQVITRQCLEALEYLHSLG-----IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577
L+V+T+ L AL+ H ++H DLKP N+ + Q +K+ D G + +
Sbjct: 114 LRVMTQLTL-ALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDT 170
Query: 578 CL---YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+V + Y +PE + + Y++K D+WSLGC+L EL
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + +L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLAAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+ L + + IV E + +L F K N + FT+ +L + R
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-----DGQFTVIQLVGMLRGISA 135
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL +G +H DL NILI S C K+ D G S D+ +R +
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNLVC--KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
APE I + D+WS G ++ E+
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEV 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 475 EH-HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
EH +I+RL + + I+ E + L F + N + FT+ +L + R
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN-----DGQFTVIQLVGMLRGIAS 129
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------- 585
+ YL + +H DL NIL+ S C K+ D G S F +N ++ S
Sbjct: 130 GMRYLAEMSYVHRDLAARNILVNSNLVC--KVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 586 -YRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ APE I + D WS G ++ E+
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEV 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 12/146 (8%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
D +I+RL IV E + F + G+ FT+ +L + R
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENG--SLDTFLRTHDGQ--FTIMQLVGMLRGVGAG 163
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS-----YR 587
+ YL LG +H DL N+L+ S C K+ D G S + D Y + +
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVC--KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT 221
Query: 588 APEVIIGLPYDQKIDLWSLGCILAEL 613
APE I + D+WS G ++ E+
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEV 247
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 23/211 (10%)
Query: 422 LGSAAFSKVFQAQ--DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG AF KVF A+ +L D L +K KD D + + + N HI+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN--LQHEHIV 78
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF----------TLGRLQVITRQ 529
+ Y + L +V E ++ + KF + G +A T ++ I +Q
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHG--DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSR--- 584
+ YL S +H DL N L+ + +KI D G S + TD + +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVG--ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ PE I+ + + D+WSLG +L E++T
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGCLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 418 VTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476
+ E LG+ +V+ + HT V V K +K D L E L+K +
Sbjct: 17 LVERLGAGQAGEVWMGYYNGHTKVAV--KSLKQGSMSPDAFLAEANLMKQLQ------HQ 68
Query: 477 HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
++RLY E ++I+ E + +L +F K SG + T+ +L + Q E +
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK--TPSGIK--LTINKLLDMAAQIAEGMA 123
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEV 591
++ IH DL+ NIL+ C KI D G + D + + APE
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC--KIADFGLARLIEDAEXTAREGAKFPIKWTAPEA 181
Query: 592 IIGLPYDQKIDLWSLGCILAELWT 615
I + K D+WS G +L E+ T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V+ + V +K +K + L E +++K + +++L
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQL 78
Query: 482 YDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
Y E ++IV E + + L +F K E G Y L +L + Q + Y+ +
Sbjct: 79 YAVVSE-EPIYIVMEYMSKGCLLDFLK--GEMG--KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR----SYRAPEVIIGLP 596
+H DL+ NIL+ C K+ D G + DN Q + APE +
Sbjct: 134 NYVHRDLRAANILVGENLVC--KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+WS G +L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 523 LQVITRQCLEALEYLHSLG-----IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577
L+V+T+ L AL+ H ++H DLKP N+ + Q ++ L ++
Sbjct: 114 LRVMTQLTL-ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 578 CL-YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+V + Y +PE + + Y++K D+WSLGC+L EL
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 498 LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 557
LR+ EF + E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 125 LRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK 184
Query: 558 QRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELW 614
+I L + + +R + APE I Y + D+WS G +L E++
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 615 T 615
+
Sbjct: 245 S 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 84
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-LCLYVQSR---SYRAPEVIIGLPY 597
+H DL N L+ + +K+ D G S + D+ V S+ + PEV++ +
Sbjct: 141 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 598 DQKIDLWSLGCILAELWT 615
K D+W+ G ++ E+++
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDN 576
FT+ +L + R + YL +G +H DL NIL+ S C K+ D G S + D
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVC--KVSDFGLSRVIEDDP 199
Query: 577 LCLYVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+Y + + APE I + D+WS G ++ E+
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 23 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 75
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 76 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-LCLYVQSR---SYRAPEVIIGLPY 597
+H DL N L+ + +K+ D G S + D+ V S+ + PEV++ +
Sbjct: 132 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 598 DQKIDLWSLGCILAELWT 615
K D+W+ G ++ E+++
Sbjct: 190 SSKSDIWAFGVLMWEIYS 207
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 475 EH-HILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
EH +I+RL + + I+ E + L F + N + FT+ +L + R
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN-----DGQFTVIQLVGMLRGIAS 127
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC--LYVQSRS----- 585
+ YL + +H DL NIL+ S C K+ D G S F +N Y S
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVC--KVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 586 -YRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ APE I + D WS G ++ E+
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 420 EYLGSAAFSKVF----QAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
E +G F +VF +A + V C + + D + L E ++LK + +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPN---- 173
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I+RL + ++IV EL++ +F F + G A + L + +E
Sbjct: 174 --IVRLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEG--ARLRVKTLLQMVGDAAAGME 227
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYR-------A 588
YL S IH DL N L+ ++ +KI D G S + D + Y S R A
Sbjct: 228 YLESKCCIHRDLAARNCLVT--EKNVLKISDFGMSREEADGV--YAASGGLRQVPVKWTA 283
Query: 589 PEVIIGLPYDQKIDLWSLGCILAE 612
PE + Y + D+WS G +L E
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWE 307
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 84
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-LCLYVQSR---SYRAPEVIIGLPY 597
+H DL N L+ + +K+ D G S + D+ V S+ + PEV++ +
Sbjct: 141 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 598 DQKIDLWSLGCILAELWT 615
K D+W+ G ++ E+++
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 16 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 68
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 69 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-LCLYVQSR---SYRAPEVIIGLPY 597
+H DL N L+ + +K+ D G S + D+ V S+ + PEV++ +
Sbjct: 125 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 598 DQKIDLWSLGCILAELWT 615
K D+W+ G ++ E+++
Sbjct: 183 SSKSDIWAFGVLMWEIYS 200
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 420 EYLGSAAFSKVF----QAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
E +G F +VF +A + V C + + D + L E ++LK + +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPN---- 173
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
I+RL + ++IV EL++ +F F + G A + L + +E
Sbjct: 174 --IVRLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEG--ARLRVKTLLQMVGDAAAGME 227
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-----LYVQSRSYRAPE 590
YL S IH DL N L+ ++ +KI D G S + D + L + APE
Sbjct: 228 YLESKCCIHRDLAARNCLVT--EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 591 VIIGLPYDQKIDLWSLGCILAE 612
+ Y + D+WS G +L E
Sbjct: 286 ALNYGRYSSESDVWSFGILLWE 307
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 12 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 64
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 65 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-LCLYVQSR---SYRAPEVIIGLPY 597
+H DL N L+ + +K+ D G S + D+ V S+ + PEV++ +
Sbjct: 121 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 598 DQKIDLWSLGCILAELWT 615
K D+W+ G ++ E+++
Sbjct: 179 SSKSDIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG+ F V + DV +K+IK D+ ++E K++ ++ +++L
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQL 69
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
Y +FI+ E + N F +L + + EA+EYL S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCL----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-LCLYVQSR---SYRAPEVIIGLPY 597
+H DL N L+ + +K+ D G S + D+ V S+ + PEV++ +
Sbjct: 126 FLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 598 DQKIDLWSLGCILAELWT 615
K D+W+ G ++ E+++
Sbjct: 184 SSKSDIWAFGVLMWEIYS 201
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 12/146 (8%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
D +I+RL IV E + F + G+ FT+ +L + R
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENG--SLDTFLRTHDGQ--FTIMQLVGMLRGVGAG 163
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------YR 587
+ YL LG +H DL N+L+ S C K+ D G S D+ + +
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVC--KVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 588 APEVIIGLPYDQKIDLWSLGCILAEL 613
APE I + D+WS G ++ E+
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEV 247
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 35/165 (21%)
Query: 456 QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGG 514
+ LD ++KLV D +E +HL++V EL+ + + E S
Sbjct: 91 KKLDHPNVVKLVEVLDDPNE-------------DHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQ 573
+A F L ++ +EYLH IIH D+KP N+L+ + IKI D G S+ F+
Sbjct: 138 QARFYFQDL-------IKGIEYLHYQKIIHRDIKPSNLLVG--EDGHIKIADFGVSNEFK 188
Query: 574 TDNLCL--YVQSRSYRAPEVIIGLPYDQKI------DLWSLGCIL 610
+ L V + ++ APE L +KI D+W++G L
Sbjct: 189 GSDALLSNTVGTPAFMAPE---SLSETRKIFSGKALDVWAMGVTL 230
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+ L + + I+ E + +L F + N + FT+ +L + R
Sbjct: 88 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGIGS 142
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL + +H DL NIL+ S C K+ D G S D+ +R +
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVC--KVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 200
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
APE I + D+WS G ++ E+
Sbjct: 201 TAPEAIAYRKFTSASDVWSYGIVMWEV 227
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
A RL + + Q + +EYL S +H DL NIL++S +KI D G +
Sbjct: 108 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLAKLLP 165
Query: 575 DNLCLYVQSRS------YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ YV + APE + + ++ D+WS G +L EL+T
Sbjct: 166 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V+ + V +K +K D ++ L E ++K + + + L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 482 YDYFYHLEHLFIVCELL-RANLYEF-QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS 539
FY IV E + NL ++ ++ N+E T L + Q A+EYL
Sbjct: 100 EPPFY------IVTEYMPYGNLLDYLRECNREE-----VTAVVLLYMATQISSAMEYLEK 148
Query: 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGL 595
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 149 KNFIHRDLAARNCLVG--ENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 596 PYDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 207 TFSIKSDVWAFGVLLWEIAT 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG F +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 72
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 128
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 129 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ TL L + Q + +E+L S IH DL NIL+ +I L ++ +
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+R + APE I Y + D+WS G +L E+++
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
A RL + + Q + +EYL S +H DL NIL++S +KI D G +
Sbjct: 121 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLAKLLP 178
Query: 575 DNLCLYVQSRS------YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ YV + APE + + ++ D+WS G +L EL+T
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574
A RL + + Q + +EYL S +H DL NIL++S +KI D G +
Sbjct: 109 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLAKLLP 166
Query: 575 DNLCLYVQSRS------YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ YV + APE + + ++ D+WS G +L EL+T
Sbjct: 167 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG--SSCFQTDNLCLYVQS 583
+ Q +EYL S ++H DL N+L+ Y + +KI DLG + D L S
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLV--YDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 584 R---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I+ + D+WS G +L E+++
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG--SSCFQTDNLCLYVQS 583
+ Q +EYL S ++H DL N+L+ Y + +KI DLG + D L S
Sbjct: 150 LVAQIAAGMEYLSSHHVVHKDLATRNVLV--YDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 584 R---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I+ + D+WS G +L E+++
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 72
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 128
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 129 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+ L + + I+ E + +L F + N + FT+ +L + R
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGIGS 127
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL + +H DL NIL+ S C K+ D G S D+ +R +
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVC--KVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
APE I + D+WS G ++ E+
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEV 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
D +++ L + I+ E + F +++ G+ FT+ +L + R
Sbjct: 92 DHPNVIHLEGVVTKSTPVMIITEFMENG--SLDSFLRQNDGQ--FTVIQLVGMLRGIAAG 147
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC--LYVQSRS------ 585
++YL + +H DL NIL+ S C K+ D G S F D+ Y +
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVC--KVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ APE I + D+WS G ++ E+
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEV 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLE 532
D +I+ L + + I+ E + +L F + N + FT+ +L + R
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGIGS 121
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------Y 586
++YL + +H DL NIL+ S C K+ D G S D+ +R +
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVC--KVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAEL 613
APE I + D+WS G ++ E+
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEV 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 79
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 135
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 136 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 409 NTVIAGRYYVTE-----YLGSAAFSKVFQAQDLHTG----VDVCLKII--KNDKDFFDQS 457
N V+A + TE LGS F V + + G + VC+K+I K+ + F
Sbjct: 21 NKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 80
Query: 458 LDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY 517
D + + + D HI+RL + L +L + + ++ + G
Sbjct: 81 TDHMLAIGSL------DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL 134
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577
+Q+ + + YL G++H +L N+L+KS + ++ + D
Sbjct: 135 LLNWGVQIA-----KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 578 CLYVQSRS---YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
LY ++++ + A E I Y + D+WS G + EL T
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474
LG+ AF KV +A G + V +K++K+ D + + E+K++ + +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 475 EHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK----------FNQESGGEAYFTLGRL 523
+I+ L H + ++ E +L F + +N E + L
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 524 QVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS 583
+ Q + + +L S IH D+ N+L+ + +I L N + +
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 584 R---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
R + APE I Y + D+WS G +L E+++
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 79
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 135
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 136 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 320
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 376
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH +L N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 377 NFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 435 FSIKSDVWAFGVLLWEIAT 453
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 27/198 (13%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
N V+ Y V +G +F +F+ +L V +K D Q DE + KL+
Sbjct: 4 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-PQLRDEYRTYKLL- 61
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
A I +Y + H +V +LL +L + F++ + + +
Sbjct: 62 ----AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK-----FSVKTVAMAAK 112
Query: 529 QCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS 585
Q L ++ +H +++ D+KP+N LI S I ++D G F
Sbjct: 113 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF------------- 159
Query: 586 YRAPEVIIGLPYDQKIDL 603
YR P +PY +K +L
Sbjct: 160 YRDPVTKQHIPYREKKNL 177
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 27/198 (13%)
Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
N V+ Y V +G +F +F+ +L V +K D Q DE + KL+
Sbjct: 5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-PQLRDEYRTYKLL- 62
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
A I +Y + H +V +LL +L + F++ + + +
Sbjct: 63 ----AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK-----FSVKTVAMAAK 113
Query: 529 QCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS 585
Q L ++ +H +++ D+KP+N LI S I ++D G F
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF------------- 160
Query: 586 YRAPEVIIGLPYDQKIDL 603
YR P +PY +K +L
Sbjct: 161 YRDPVTKQHIPYREKKNL 178
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 281
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 337
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH +L N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 338 NFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 396 FSIKSDVWAFGVLLWEIAT 414
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 79
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 135
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 136 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 74
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 131 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ-----TDNLCLYVQSRSYR 587
A++ +H L +H D+KP+NIL+ I++ D G SC + T + V + Y
Sbjct: 187 AIDSVHQLHYVHRDIKPDNILMD--MNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYI 243
Query: 588 APEVIIGLP-----YDQKIDLWSLGCILAELWTGEV 618
+PE++ + Y + D WSLG + E+ GE
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 78
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 134
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 135 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 193 FSIKSDVWAFGVLLWEIAT 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRA 588
A++ +H L +H D+KP+N+L+ I++ D GS D+ + V + Y +
Sbjct: 203 AIDSIHQLHYVHRDIKPDNVLLDV--NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 589 PEVIIGL-----PYDQKIDLWSLGCILAELWTGEV 618
PE++ + Y + D WSLG + E+ GE
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 295
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 498 LRANLYEFQKFNQ--ESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF + + E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 125 LRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 184
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L ++ + +R + APE I Y + D+WS G +L E
Sbjct: 185 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 244
Query: 613 LWT 615
+++
Sbjct: 245 IFS 247
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 75
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 131
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 132 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 190 FSIKSDVWAFGVLLWEIAT 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 76
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 132
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 133 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 76
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 132
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 133 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 74
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 131 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 278
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 334
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH +L N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 335 NFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 393 FSIKSDVWAFGVLLWEIAT 411
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 533 ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRA 588
A++ +H L +H D+KP+N+L+ I++ D GS D+ + V + Y +
Sbjct: 187 AIDSIHQLHYVHRDIKPDNVLLDV--NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 589 PEVIIGL-----PYDQKIDLWSLGCILAELWTGEV 618
PE++ + Y + D WSLG + E+ GE
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 279
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 72
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 128
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 129 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQ 573
A RL + + Q + +EYL S +H DL NIL++S +KI D G +
Sbjct: 105 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLAKLLP 162
Query: 574 TDNLCLYVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
D V+ + APE + + ++ D+WS G +L EL+T
Sbjct: 163 LDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 79
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 135
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 136 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 74
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 131 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ TL L + Q + +E+L S IH DL NIL+ +I L ++ +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 253
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+R + APE I Y + D+WS G +L E+++
Sbjct: 254 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ TL L + Q + +E+L S IH DL NIL+ +I L ++ +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 255
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+R + APE I Y + D+WS G +L E+++
Sbjct: 256 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 87
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 88 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 143
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 144 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 202 FSIKSDVWAFGVLLWEIAT 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ TL L + Q + +E+L S IH DL NIL+ +I L ++ +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 246
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+R + APE I Y + D+WS G +L E+++
Sbjct: 247 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474
LG+ AF KV +A G + V +K++K+ D + + E+K++ + +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 475 EHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK------FNQESGGEAYFTLGRLQVIT 527
+I+ L H + ++ E +L F + ++E G L L +
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP--LELRDLLHFS 166
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR--- 584
Q + + +L S IH D+ N+L+ + +I L N + +R
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G +L E+++
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 74
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL----YMATQISSAMEYLEKK 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 131 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L ++ + +R + APE I Y + D+WS G +L E
Sbjct: 183 EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 613 LWT 615
+++
Sbjct: 243 IFS 245
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ TL L + Q + +E+L S IH DL NIL+ +I L ++ +
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+R + APE I Y + D+WS G +L E+++
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
+ TL L + Q + +E+L S IH DL NIL+ +I L ++ +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+R + APE I Y + D+WS G +L E+++
Sbjct: 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 79
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 135
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 136 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 34/215 (15%)
Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL-VNKNDPADEH 476
+ E +G F +V+ + H V + L I+ D + D++K K V
Sbjct: 37 IGELIGKGRFGQVYHGR-WHGEVAIRLIDIERDNE------DQLKAFKREVMAYRQTRHE 89
Query: 477 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
+++ HL I+ L + LY + + + + + I ++ ++ +
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVR-----DAKIVLDVNKTRQIAQEIVKGMG 144
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG----SSCFQT----DNLCLYVQSRSYR 587
YLH+ GI+H DLK +N+ Y ++ I D G S Q D L + +
Sbjct: 145 YLHAKGILHKDLKSKNVF---YDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 588 APEVII---------GLPYDQKIDLWSLGCILAEL 613
APE+I LP+ + D+++LG I EL
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L ++ + +R + APE I Y + D+WS G +L E
Sbjct: 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 613 LWT 615
+++
Sbjct: 243 IFS 245
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474
LG+ AF KV +A G + V +K++K+ D + + E+K++ + +++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 475 EHHILRLYDYFYHLEHLFIVCELL-RANLYEFQK------FNQESGGEAYFTLGRLQVIT 527
+I+ L H + ++ E +L F + ++E G L L +
Sbjct: 103 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP--LELRDLLHFS 158
Query: 528 RQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR--- 584
Q + + +L S IH D+ N+L+ + +I L N + +R
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 585 SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G +L E+++
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 173
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L ++ + +R + APE I Y + D+WS G +L E
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 613 LWT 615
+++
Sbjct: 234 IFS 236
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 31/118 (26%)
Query: 531 LEALEYLHSLGIIHCDLKPENIL----IKSY-----------QRCEIKIIDLGSSCFQ-- 573
+AL+ +H GI+H D+KP N L +K Y +I+++ S Q
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQE 186
Query: 574 --TDNLCLYVQSR-----------SYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGE 617
+ N C SR +RAPEV+ P ID+WS G I L +G
Sbjct: 187 RCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 74
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 131 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 160 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 219
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L ++ + +R + APE I Y + D+WS G +L E
Sbjct: 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 613 LWT 615
+++
Sbjct: 280 IFS 282
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474
LG+ AF KV +A G + V +K++K+ D + + E+K++ + +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 475 EHHILRLYDYFYHLEHLFIVCELL-RANLYEF-QKFNQESGGEAYFTLGRLQVITR---- 528
+I+ L H + ++ E +L F ++ ++ + F + + TR
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 529 ---QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR- 584
Q + + +L S IH D+ N+L+ + +I L N + +R
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 585 --SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G +L E+++
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 74
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 130
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D + ++ + APE +
Sbjct: 131 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 173
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L ++ + +R + APE I Y + D+WS G +L E
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 613 LWT 615
+++
Sbjct: 234 IFS 236
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 176 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS 585
T Q + +EYL + IH DL NIL+++ R +KI D G + D V+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE + + D+WS G +L EL+T
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474
LG+ AF KV +A G + V +K++K+ D + + E+K++ + +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 475 EHHILRLYDYFYHLEHLFIVCELL-RANLYEF-QKFNQESGGEAYFTLGRLQVITR---- 528
+I+ L H + ++ E +L F ++ ++ + F + TR
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 529 ---QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR- 584
Q + + +L S IH D+ N+L+ + +I L N + +R
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 585 --SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G +L E+++
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 20/205 (9%)
Query: 420 EYLGSAAFSKVFQAQDLHTG----VDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPA 473
+ LGS F V + + G + VC+K+I K+ + F D + + +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL------ 72
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
D HI+RL + L +L + + ++ + G +Q+ +
Sbjct: 73 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA-----KG 127
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS---YRAPE 590
+ YL G++H +L N+L+KS + ++ + D LY ++++ + A E
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 591 VIIGLPYDQKIDLWSLGCILAELWT 615
I Y + D+WS G + EL T
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 78
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 79 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTD------NLCLYV 581
+ + YL++ +H DL N ++ +KI D G + ++TD L V
Sbjct: 138 IADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 196 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR---S 585
Q +E+L S IH DL NIL+ +I L ++ + +R
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK 266
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y K D+WS G +L E+++
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + YL +IH DL N L+ Q IK+ D G + F D+ Y S
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVK 169
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +PEV Y K D+WS G ++ E+++
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 26/214 (12%)
Query: 422 LGSAAFSKVFQAQ--DLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG AF KVF A+ +L D L +K KD + + + + N HI+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN--LQHEHIV 80
Query: 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY-------------FTLGRLQVI 526
+ Y + L +V E ++ + KF + G +A L ++ I
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHG--DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 527 TRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNLCLYVQSR 584
Q + YL S +H DL N L+ + +KI D G S + TD + +
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 585 ---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ PE I+ + + D+WS G IL E++T
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 80 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTD------NLCLYV 581
+ + YL++ +H DL N ++ +KI D G + ++TD L V
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 197 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 76
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 132
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D ++ + APE +
Sbjct: 133 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 498 LRANLYEFQKFNQ-ESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556
LR+ EF + E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 124 LRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Query: 557 YQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+I L + + +R + APE I Y + D+WS G +L E+
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 614 WT 615
++
Sbjct: 244 FS 245
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 17/199 (8%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
LG + +V++ + V +K +K D ++ L E ++K + + +++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------LVQL 75
Query: 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL 540
+I+ E + NL ++ + A L + Q A+EYL
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL----YMATQISSAMEYLEKK 131
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT-DNLCLYVQSR---SYRAPEVIIGLP 596
IH DL N L+ + +K+ D G S T D ++ + APE +
Sbjct: 132 NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 597 YDQKIDLWSLGCILAELWT 615
+ K D+W+ G +L E+ T
Sbjct: 190 FSIKSDVWAFGVLLWEIAT 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 80 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNL------CLYV 581
+ + YL++ +H DL N ++ +KI D G + +TD L V
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 197 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L + + +R + APE I Y + D+WS G +L E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 613 LWT 615
+++
Sbjct: 243 IFS 245
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLG 568
FTL + +I Q L +EY+HS +I+ D+KPEN LI + + I IID G
Sbjct: 94 FTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFG 147
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 76
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 77 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNL------CLYV 581
+ + YL++ +H DL N ++ +KI D G + +TD L V
Sbjct: 136 IADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 194 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 173
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L + + +R + APE I Y + D+WS G +L E
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 613 LWT 615
+++
Sbjct: 234 IFS 236
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
+ RY + +GS +F ++ D+ G +V +K+ + K Q E K+ K++
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQGGV 63
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I + ++ +V ELL +L + F F+L + ++ Q +
Sbjct: 64 G-----IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-----FSLKTVLLLADQMI 113
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCE-IKIIDLGSSC----FQTDNLCLYVQSRS- 585
+EY+HS IH D+KP+N L+ ++ + IID G + +T Y ++++
Sbjct: 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
Y + +G+ ++ DL SLG +L G +
Sbjct: 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL 211
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
+ RY + +GS +F ++ D+ G +V +K+ + K Q E K+ K++
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQGGV 65
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531
I + ++ +V ELL +L + F F+L + ++ Q +
Sbjct: 66 G-----IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK-----FSLKTVLLLADQMI 115
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCE-IKIIDLGSSC----FQTDNLCLYVQSRS- 585
+EY+HS IH D+KP+N L+ ++ + IID G + +T Y ++++
Sbjct: 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 175
Query: 586 -----YRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618
Y + +G+ ++ DL SLG +L G +
Sbjct: 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL 213
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 80 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTDNL------CLYV 581
+ + YL++ +H DL N ++ +KI D G + +TD L V
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 197 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIK-------SYQRCEIKIIDLGSSCFQTDNLC 578
I + L+AL+Y+H +G +H +K +ILI S R + +I G +
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 192
Query: 579 LY-VQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEV 618
Y V+ + +PEV+ YD K D++S+G EL G V
Sbjct: 193 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIK-------SYQRCEIKIIDLGSSCFQTDNLC 578
I + L+AL+Y+H +G +H +K +ILI S R + +I G +
Sbjct: 117 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 176
Query: 579 LY-VQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEV 618
Y V+ + +PEV+ YD K D++S+G EL G V
Sbjct: 177 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 498 LRANLYEF--QKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555
LR+ EF K E + + TL L + Q + +E+L S IH DL NIL+
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 173
Query: 556 SYQRCEIKIIDLGSSCFQTDNLCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAE 612
+I L + + +R + APE I Y + D+WS G +L E
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 613 LWT 615
+++
Sbjct: 234 IFS 236
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + YL +IH DL N L+ Q IK+ D G + F D+ Y S
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVK 169
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +PEV Y K D+WS G ++ E+++
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 522 RLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLY 580
+L T Q + +EYL + IH +L NIL+++ R +KI D G + D
Sbjct: 116 KLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENR--VKIGDFGLTKVLPQDKEYYK 173
Query: 581 VQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
V+ + APE + + D+WS G +L EL+T
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEA 533
D +++ L + I+ E + F +++ G+ FT+ +L + R
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENG--SLDSFLRQNDGQ--FTVIQLVGMLRGIAAG 121
Query: 534 LEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC--LYVQSRS------ 585
++YL + +H L NIL+ S C K+ D G S F D+ Y +
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVC--KVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ APE I + D+WS G ++ E+
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEV 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + YL +IH DL N L+ Q IK+ D G + F D+ Y S
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVK 172
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +PEV Y K D+WS G ++ E+++
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + YL +IH DL N L+ Q IK+ D G + F D+ Y S
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVK 189
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +PEV Y K D+WS G ++ E+++
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + YL +IH DL N L+ Q IK+ D G + F D+ Y S
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVK 167
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +PEV Y K D+WS G ++ E+++
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + YL +IH DL N L+ Q IK+ D G + F D+ Y S
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQ--YTSSTGTKFPVK 170
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +PEV Y K D+WS G ++ E+++
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLG 568
FTL + +I Q + +EY+H+ +I+ D+KPEN L+ + ++ I IID G
Sbjct: 97 FTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFG 150
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 80
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 81 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTD------NLCLYV 581
+ + YL++ +H +L N ++ +KI D G + ++TD L V
Sbjct: 140 IADGMAYLNAKKFVHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 198 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 80 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS--CFQTD------NLCLYV 581
+ + YL++ +H +L N ++ +KI D G + ++TD L V
Sbjct: 139 IADGMAYLNAKKFVHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ + APE + + D+WS G +L E+
Sbjct: 197 R---WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 422 LGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474
LG+ AF KV +A G + V +K++K+ D + + E+K++ + +++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 95
Query: 475 EHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGR----------- 522
+I+ L H + ++ E +L F + E+ G+
Sbjct: 96 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 523 ------LQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
L + Q + + +L S IH D+ N+L+ + +I L N
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +R + APE I Y + D+WS G +L E+++
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 422 LGSAAFSKVFQAQDL---HTGVD--VCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LGS AF KV A TGV V +K++K D ++ + E+K++ + ++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE--- 109
Query: 475 EHHILRLYDYFYHLEHLFIVCEL---------LRANL---------YEFQKFNQESGGEA 516
+I+ L ++++ E LR+ YE QK +E
Sbjct: 110 --NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 517 YFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576
T L Q + +E+L +H DL N+L+ + +I L N
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 577 LCLYVQSR---SYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ +R + APE + Y K D+WS G +L E+++
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS-- 585
Q + ++YL S +H DL N+L++S ++KI D G + +TD V+
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 586 ---YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE ++ + D+WS G L EL T
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 460 EIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF 518
E++LL+ +DEH +++R + + +I EL A L E+ E A+
Sbjct: 67 EVQLLR------ESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYV----EQKDFAHL 116
Query: 519 TLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK---SYQRCEIKIIDLG 568
L + ++ +Q L +LHSL I+H DLKP NILI ++ + + I D G
Sbjct: 117 GLEPITLL-QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFG 168
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDNLCLYVQ 582
I + + +LH IH D+K NIL+ +I L + QT V
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ +Y APE + G K D++S G +L E+ TG
Sbjct: 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS-- 585
Q + ++YL S +H DL N+L++S ++KI D G + +TD V+
Sbjct: 122 QICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 586 ---YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE ++ + D+WS G L EL T
Sbjct: 180 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 409 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 468
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 469 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 526
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
Q+ + APE I + K D+WS G ++ E ++
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 410 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 469
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 470 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 527
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
Q+ + APE I + K D+WS G ++ E ++
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL---GSSCFQTDNLCLYVQSRSYRA 588
EA+EYL +H DL N+L+ ++ L SS T L + + A
Sbjct: 119 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTA 173
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + K D+WS G +L E+++
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 417 YVTEYLGSAAFSKVFQA-----QDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
YV LG AF++V++A D LK+ K N +F+ + +L+ +
Sbjct: 68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGT-------QLMER 120
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ-----ESGGEAYFTLGRLQ 524
P+ +H ++ Y HLF +L LY + ++ E G +
Sbjct: 121 LKPSMQHMFMKFYS-----AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVI 175
Query: 525 VITRQCLEALEYLHSLGIIHCDLKPENILI 554
+ L +E +H IIH D+KP+N ++
Sbjct: 176 SFAMRMLYMIEQVHDCEIIHGDIKPDNFIL 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 422 LGSAAFSKVFQ--AQDLHTG---VDVCLKIIKNDKDFFDQS--LDEIKLLKLVNKNDPAD 474
LG +F V++ A+D+ G V +K + ++ L+E ++K
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC----- 79
Query: 475 EHHILRLYDYFYHLEHLFIVCEL-----LRANLYEFQKFNQESGGEAYFTLGRLQVITRQ 529
HH++RL + +V EL L++ L + + + G TL + + +
Sbjct: 80 -HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 530 CLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-------SSCFQTDNLCLYVQ 582
+ + YL++ +H DL N ++ +KI D G ++ ++ L
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETAYYRKGGKGLL-- 194
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAEL 613
+ APE + + D+WS G +L E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDNLCLYVQ 582
I + + +LH IH D+K NIL+ +I L + QT V
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ +Y APE + G K D++S G +L E+ TG
Sbjct: 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL---GSSCFQTDNLCLYVQSRSYRA 588
EA+EYL +H DL N+L+ ++ L SS T L + + A
Sbjct: 128 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTA 182
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + K D+WS G +L E+++
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577
F+L + +I Q + +EY+HS +I+ D+KPEN LI G+ Q ++
Sbjct: 123 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGR----------PGNKTQQVIHI 172
Query: 578 CLYVQSRSYRAPEVIIGLPYDQKIDL 603
+ ++ Y PE +PY + L
Sbjct: 173 IDFALAKEYIDPETKKHIPYREHKSL 198
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577
F+L + +I Q + +EY+HS +I+ D+KPEN LI G+ Q ++
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGR----------PGNKTQQVIHI 151
Query: 578 CLYVQSRSYRAPEVIIGLPYDQKIDL 603
+ ++ Y PE +PY + L
Sbjct: 152 IDFALAKEYIDPETKKHIPYREHKSL 177
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL---GSSCFQTDNLCLYVQSRSYRA 588
EA+EYL +H DL N+L+ ++ L SS T L + + A
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTA 354
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + K D+WS G +L E+++
Sbjct: 355 PEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 126
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 184
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 126
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 184
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 110
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENXY 168
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 65 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 124
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 125 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 182
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 518 FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI---KSYQRCEIKIIDLG 568
F+L + +I Q + +EY+HS +I+ D+KPEN LI + + I IID G
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFG 155
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL---GSSCFQTDNLCLYVQSRSYRA 588
EA+EYL +H DL N+L+ ++ L SS T L + + A
Sbjct: 113 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTA 167
Query: 589 PEVIIGLPYDQKIDLWSLGCILAELWT 615
PE + + K D+WS G +L E+++
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 110
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 168
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 57 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 116
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 174
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 102/237 (43%), Gaps = 45/237 (18%)
Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQS-LDE 460
LP ++ +A + + E +G + +V++ G +V +KI +++K +F ++ L
Sbjct: 27 LPFLVQRTVARQITLLECVGKGRYGEVWRGS--WQGENVAVKIFSSRDEKSWFRETELYN 84
Query: 461 IKLLKLVN-----KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
+L+ N +D H +L+ ++ E +LY++ +
Sbjct: 85 TVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM---------GSLYDYLQLTTLD--- 132
Query: 516 AYFTLGRLQVITRQCLEALEYLH--------SLGIIHCDLKPENILIKSYQRCEIKIIDL 567
T+ L+++ L +LH I H DLK +NIL+K +C I + L
Sbjct: 133 ---TVSCLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 568 GSSCFQTDNLC-----LYVQSRSYRAPEVI-IGLPYD-----QKIDLWSLGCILAEL 613
Q+ N V ++ Y APEV+ + D +++D+W+ G +L E+
Sbjct: 189 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 45 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 104
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 105 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 162
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 552
+V ELL +L + F F+L + ++ Q + +EY+HS IH D+KP+N
Sbjct: 82 MVMELLGPSLEDLFNFCSRK-----FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNF 136
Query: 553 LIKSYQRCE-IKIIDLGSSC----FQTDNLCLYVQSRS------YRAPEVIIGLPYDQKI 601
L+ ++ + IID G + +T Y ++++ Y + +G+ ++
Sbjct: 137 LMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRD 196
Query: 602 DLWSLGCILAELWTGEV 618
DL SLG +L G +
Sbjct: 197 DLESLGYVLMYFNLGSL 213
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 470 NDPADEHHILRLYDYFYHLEHLFIV-----CE----LLRANLYEFQKFNQESGGEAYFTL 520
NDPA + +L + L++ +IV CE +L + E N+ +
Sbjct: 47 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD 106
Query: 521 GRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCL 579
+ + Q ++YL +H DL N+L+ + KI D G S + D
Sbjct: 107 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYY 164
Query: 580 YVQSRS-----YRAPEVIIGLPYDQKIDLWSLGCILAE 612
Q+ + APE I + K D+WS G ++ E
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC---FQTDNLCLYVQ 582
I + + +LH IH D+K NIL+ +I L + Q V
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ +Y APE + G K D++S G +L E+ TG
Sbjct: 189 TTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 79
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 80 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 134
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS-----YRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 135 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 191
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 192 FTSASDVWMFGVCMWEI 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI------KIIDLGSSCFQTDNLCLYVQ 582
Q + + YL + ++H DL N+L+KS +I +++D+ + + D + ++
Sbjct: 127 QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK 186
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ A E I+ + + D+WS G + EL T
Sbjct: 187 ---WMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 104
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 105 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 159
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 160 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 216
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 217 FTSASDVWMFGVCMWEI 233
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 81
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 82 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 136
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS-----YRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 137 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 193
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 194 FTSASDVWMFGVCMWEI 210
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 523 LQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYV 581
++ I + L + Y+H+ I H D+KP NIL+ R +K+ D G S + D
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR--VKLSDFGESEYMVDKKIKGS 210
Query: 582 Q-SRSYRAPEVIIG-LPYD-QKIDLWSLGCILAELWTGEV 618
+ + + PE Y+ K+D+WSLG L ++ V
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 395 RTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDF 453
R+G N+ L IL + + LGS AF V++ + G V + + IK ++
Sbjct: 6 RSGEAPNQALLRILKET---EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 62
Query: 454 FD-----QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKF 508
+ LDE ++ V D H+ RL I + L ++ +
Sbjct: 63 TSPKANKEILDEAYVMASV------DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE 116
Query: 509 NQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568
++++ G Y +Q+ + + YL ++H DL N+L+K+ Q +KI D G
Sbjct: 117 HKDNIGSQYLLNWCVQIA-----KGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFG 169
Query: 569 SSCFQTDNLCLYVQSRSYRAP-----------EVIIGLPYDQKIDLWSLGCILAELWT 615
+ L + + Y A E I+ Y + D+WS G + EL T
Sbjct: 170 RAKL------LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 78
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 79 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 133
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 134 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 190
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 191 FTSASDVWMFGVCMWEI 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 456
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 457 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 511
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 512 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 568
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 569 FTSASDVWMFGVCMWEI 585
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRS------ 585
E + +L S IH DL N L+ C +K+ D G + + D+ YV S
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDR-DLC-VKVSDFGMTRYVLDDQ--YVSSVGTKFPVK 170
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APEV Y K D+W+ G ++ E+++
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 73
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 74 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 128
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 129 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 185
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 186 FTSASDVWMFGVCMWEI 202
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 76
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 77 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 131
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 132 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 188
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 189 FTSASDVWMFGVCMWEI 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 76
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 77 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR 131
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 132 FVHRDIAARNVLVSS-NDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 188
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 189 FTSASDVWMFGVCMWEI 205
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL---YVQ 582
I + + +LH IH D+K NIL+ +I L + + + V
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
+ +Y APE + G K D++S G +L E+ TG
Sbjct: 192 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-----CFQTDNLCLYVQSRSY 586
L YLH+ IIH D+K NIL+ + KI D G S QT + + Y
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD--ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCLI 621
PE I +K D++S G +L E+ ++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 522 RLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD----NL 577
R I RQ AL+ H+ G H D+KPENIL+ + ++D G + TD L
Sbjct: 135 RAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFA--YLVDFGIASATTDEKLTQL 192
Query: 578 CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616
V + Y APE + D+++L C+L E TG
Sbjct: 193 GNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 78
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I+ + L ++ + ++++ G Y +Q+ + +
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 133
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKL------LGAEEKEYHAEGGKVPI 185
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 456
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 457 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 511
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 512 FVHRDIAARNVLV-SATDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 568
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 569 FTSASDVWMFGVCMWEI 585
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 78
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I+ + L ++ + ++++ G Y +Q+ + +
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 133
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKL------LGAEEKEYHAEGGKVPI 185
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 78
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I + L ++ + ++++ G Y +Q+ + +
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 133
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKL------LGAEEKEYHAEGGKVPI 185
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 73
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I + L ++ + ++++ G Y +Q+ E +
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----EGMN 128
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 129 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKL------LGAEEKEYHAEGGKVPI 180
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPA 473
+ +++ LG A + VF+ + TG +K+ N D + E ++LK +N +
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN-- 68
Query: 474 DEHHILRLY--DYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAY-FTLGRLQVITRQ 529
I++L+ + H ++ E +LY E AY ++ R
Sbjct: 69 ----IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL----EEPSNAYGLPESEFLIVLRD 120
Query: 530 CLEALEYLHSLGIIHCDLKPENIL--IKSYQRCEIKIIDLGSSCFQTDN---LCLYVQSR 584
+ + +L GI+H ++KP NI+ I + K+ D G++ D+ + LY +
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY-GTE 179
Query: 585 SYRAPEVIIGL--------PYDQKIDLWSLGCILAELWTGEV 618
Y P++ Y +DLWS+G TG +
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 395 RTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDF 453
R+G N+ L IL + + LGS AF V++ + G V + + IK ++
Sbjct: 6 RSGEAPNQALLRILKET---EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 62
Query: 454 FD-----QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKF 508
+ LDE ++ V D H+ RL I + L ++ +
Sbjct: 63 TSPKANKEILDEAYVMASV------DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVRE 116
Query: 509 NQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568
++++ G Y +Q+ + + YL ++H DL N+L+K+ Q +KI D G
Sbjct: 117 HKDNIGSQYLLNWCVQIA-----KGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFG 169
Query: 569 SSCFQTDNLCLYVQSRSYRAP-----------EVIIGLPYDQKIDLWSLGCILAELWT 615
+ L + + Y A E I+ Y + D+WS G + EL T
Sbjct: 170 LAKL------LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
L +L + +Q E + YLH+ IH DL N+L+ + + +KI D G + +
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEX 190
Query: 580 YVQSRS------YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
Y + APE + + D+WS G L EL T
Sbjct: 191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS-----CFQTDNLCLYVQSRSY 586
L YLH+ IIH D+K NIL+ + KI D G S QT + + Y
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD--ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 587 RAPEVIIGLPYDQKIDLWSLGCILAELWTGEVCLI 621
PE I +K D++S G +L E+ ++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 520 LGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579
L +L + +Q E + YLHS IH +L N+L+ + + +I L + +
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE--- 172
Query: 580 YVQSRS-------YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
Y + R + APE + + D+WS G L EL T
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481
+G F V Q + IK K+ S+ E K L+ D HI++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 76
Query: 482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG 541
++I+ EL L E + F Q + L L + Q AL YL S
Sbjct: 77 IGVITE-NPVWIIMEL--CTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR 131
Query: 542 IIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR-----SYRAPEVIIGLP 596
+H D+ N+L+ S C +K+ D G S + D+ Y S+ + APE I
Sbjct: 132 FVHRDIAARNVLV-SATDC-VKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRR 188
Query: 597 YDQKIDLWSLGCILAEL 613
+ D+W G + E+
Sbjct: 189 FTSASDVWMFGVCMWEI 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR---S 585
Q + + +L S IH DL NIL+ + +I L N + +R
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G L EL++
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 77
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I+ + L ++ + ++++ G Y +Q+ + +
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 132
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 133 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKL------LGAEEKEYHAEGGKVPI 184
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I + L ++ + ++++ G Y +Q+ + +
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 131
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKL------LGAEEKEYHAEGGKVPI 183
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 44/218 (20%)
Query: 419 TEYLGSAAFSKVFQAQDLHTG----VDVCLKII------KNDKDFFDQSLDEIKLLKLVN 468
+ LGS AF V++ + G + V +KI+ K + +F D++L +
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM----- 97
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D H++RL + + L E+ ++++ G Q++
Sbjct: 98 -----DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS--------QLLLN 144
Query: 529 QCLE---ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC--------FQTDNL 577
C++ + YL ++H DL N+L+KS +KI D G + + D
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADGG 202
Query: 578 CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ ++ + A E I + + D+WS G + EL T
Sbjct: 203 KMPIK---WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 80
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I+ + L ++ + ++++ G Y +Q+ + +
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 135
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 136 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKL------LGAEEKEYHAEGGKVPI 187
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 25/202 (12%)
Query: 422 LGSAAFSKVFQA--QDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
LG F V Q + +DV +K++K + D ++++ D +I+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIV 73
Query: 480 RLYDYFYHLEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH 538
RL E L +V E+ L++F +E + + + Q ++YL
Sbjct: 74 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREE-----IPVSNVAELLHQVSMGMKYLE 127
Query: 539 SLGIIHCDLKPENILIKSYQRCEIKIIDLG-SSCFQTDNLCLYVQSRS-------YRAPE 590
+H DL N+L+ R KI D G S D+ Y +RS + APE
Sbjct: 128 EKNFVHRDLAARNVLL--VNRHYAKISDFGLSKALGADD--SYYTARSAGKWPLKWYAPE 183
Query: 591 VIIGLPYDQKIDLWSLGCILAE 612
I + + D+WS G + E
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWE 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 44/218 (20%)
Query: 419 TEYLGSAAFSKVFQAQDLHTG----VDVCLKII------KNDKDFFDQSLDEIKLLKLVN 468
+ LGS AF V++ + G + V +KI+ K + +F D++L +
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM----- 74
Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITR 528
D H++RL + + L E+ ++++ G Q++
Sbjct: 75 -----DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS--------QLLLN 121
Query: 529 QCLE---ALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC--------FQTDNL 577
C++ + YL ++H DL N+L+KS +KI D G + + D
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADGG 179
Query: 578 CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ ++ + A E I + + D+WS G + EL T
Sbjct: 180 KMPIK---WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVI-IG 594
I H DLK +NIL+K +C I + L Q+ N V ++ Y APEV+
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 595 LPYD-----QKIDLWSLGCILAEL 613
+ D +++D+W+ G +L E+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR---S 585
Q + + +L S IH DL NIL+ + +I L N + +R
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G L EL++
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR---S 585
Q + + +L S IH DL NIL+ + +I L N + +R
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G L EL++
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 541 GIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVI-IG 594
I H DLK +NIL+K +C I + L Q+ N V ++ Y APEV+
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 595 LPYD-----QKIDLWSLGCILAEL 613
+ D +++D+W+ G +L E+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR---S 585
Q + + +L S IH DL NIL+ + +I L N + +R
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G L EL++
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 76
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I + L ++ + ++++ G Y +Q+ + +
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 131
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKL------LGAEEKEYHAEGGKVPI 183
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 80
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I+ + L ++ + ++++ G Y +Q+ + +
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 135
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 136 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKL------LGAEEKEYHAEGGKVPI 187
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 529 QCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSR---S 585
Q + + +L S IH DL NIL+ + +I L N + +R
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 586 YRAPEVIIGLPYDQKIDLWSLGCILAELWT 615
+ APE I Y + D+WS G L EL++
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKI-IKNDKDFFD-----QSLDEIKLLKLVNKNDPADE 475
LGS AF V++ + G V + + IK ++ + LDE ++ V D
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV------DN 78
Query: 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALE 535
H+ RL I+ + L ++ + ++++ G Y +Q+ + +
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA-----KGMN 133
Query: 536 YLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAP------ 589
YL ++H DL N+L+K+ Q +KI D G + L + + Y A
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKL------LGAEEKEYHAEGGKVPI 185
Query: 590 -----EVIIGLPYDQKIDLWSLGCILAELWT 615
E I+ Y + D+WS G + EL T
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPA 473
+ +++ LG A + VF+ + TG +K+ N D + E ++LK +N +
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN-- 68
Query: 474 DEHHILRLY--DYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAY-FTLGRLQVITRQ 529
I++L+ + H ++ E +LY E AY ++ R
Sbjct: 69 ----IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL----EEPSNAYGLPESEFLIVLRD 120
Query: 530 CLEALEYLHSLGIIHCDLKPENIL--IKSYQRCEIKIIDLGSSCFQTDN---LCLYVQSR 584
+ + +L GI+H ++KP NI+ I + K+ D G++ D+ + LY +
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTE 179
Query: 585 SYRAPEVIIGL--------PYDQKIDLWSLGCILAELWTGEV 618
Y P++ Y +DLWS+G TG +
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,792,853
Number of Sequences: 62578
Number of extensions: 821762
Number of successful extensions: 4123
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 275
Number of HSP's that attempted gapping in prelim test: 1827
Number of HSP's gapped (non-prelim): 1149
length of query: 621
length of database: 14,973,337
effective HSP length: 105
effective length of query: 516
effective length of database: 8,402,647
effective search space: 4335765852
effective search space used: 4335765852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)