Query 007036
Match_columns 620
No_of_seqs 292 out of 1621
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:29:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 1.2E-39 4.2E-44 346.7 10.1 123 2-144 175-305 (359)
2 2frx_A Hypothetical protein YE 100.0 2.3E-37 7.7E-42 340.4 25.7 300 2-533 145-446 (479)
3 3m4x_A NOL1/NOP2/SUN family pr 100.0 4.4E-35 1.5E-39 320.4 21.4 287 2-508 133-419 (456)
4 2b9e_A NOL1/NOP2/SUN domain fa 100.0 3.4E-35 1.2E-39 306.5 17.1 132 2-152 130-263 (309)
5 1ixk_A Methyltransferase; open 100.0 3.6E-33 1.2E-37 290.6 17.6 170 2-269 146-315 (315)
6 3m6w_A RRNA methylase; rRNA me 100.0 1.4E-32 4.8E-37 301.2 17.1 175 2-272 129-303 (464)
7 2yxl_A PH0851 protein, 450AA l 100.0 2.1E-29 7E-34 274.4 16.9 130 2-151 287-416 (450)
8 3ajd_A Putative methyltransfer 100.0 1.3E-29 4.5E-34 257.9 13.1 139 2-167 111-249 (274)
9 1sqg_A SUN protein, FMU protei 99.9 9.8E-28 3.4E-32 259.3 15.3 127 2-149 273-399 (429)
10 4dmg_A Putative uncharacterize 98.8 1.1E-08 3.9E-13 109.7 11.1 116 2-151 239-356 (393)
11 1wxx_A TT1595, hypothetical pr 98.7 4.3E-08 1.5E-12 104.1 12.6 120 2-151 234-355 (382)
12 3id6_C Fibrillarin-like rRNA/T 98.7 3.8E-08 1.3E-12 98.7 9.5 108 2-156 104-218 (232)
13 2as0_A Hypothetical protein PH 98.5 3.4E-07 1.2E-11 97.4 11.6 119 2-150 243-364 (396)
14 3c0k_A UPF0064 protein YCCW; P 98.5 3E-07 1E-11 98.0 9.5 120 2-151 246-369 (396)
15 2dul_A N(2),N(2)-dimethylguano 98.4 2.4E-07 8.2E-12 99.0 5.2 95 2-143 74-183 (378)
16 3v97_A Ribosomal RNA large sub 98.3 1.2E-06 4E-11 100.7 10.3 113 2-151 565-679 (703)
17 3axs_A Probable N(2),N(2)-dime 98.3 6.6E-07 2.3E-11 96.2 5.8 96 2-143 80-177 (392)
18 2frn_A Hypothetical protein PH 98.3 4.3E-06 1.5E-10 84.8 11.5 100 2-149 151-254 (278)
19 3tma_A Methyltransferase; thum 98.2 4.2E-06 1.4E-10 87.5 10.2 98 2-140 231-328 (354)
20 2igt_A SAM dependent methyltra 98.2 4.5E-06 1.5E-10 87.4 10.0 117 2-147 178-299 (332)
21 2qm3_A Predicted methyltransfe 98.2 1.6E-05 5.5E-10 84.0 14.0 98 2-143 198-300 (373)
22 2b3t_A Protein methyltransfera 98.1 1.4E-05 4.8E-10 80.3 12.2 115 2-143 136-254 (276)
23 3k6r_A Putative transferase PH 98.1 1.6E-05 5.6E-10 81.6 11.6 101 2-150 151-255 (278)
24 3evz_A Methyltransferase; NYSG 98.1 2.4E-05 8.1E-10 75.6 12.1 122 2-149 82-203 (230)
25 2b78_A Hypothetical protein SM 98.1 7.1E-06 2.4E-10 87.4 9.0 113 2-144 238-354 (385)
26 3lpm_A Putative methyltransfer 98.0 3.2E-05 1.1E-09 77.0 10.7 116 2-143 75-192 (259)
27 2yx1_A Hypothetical protein MJ 97.9 3.1E-05 1.1E-09 80.8 10.7 76 2-127 219-295 (336)
28 1i1n_A Protein-L-isoaspartate 97.9 1.1E-05 3.6E-10 78.1 6.0 85 2-135 105-194 (226)
29 3njr_A Precorrin-6Y methylase; 97.9 6.7E-05 2.3E-09 72.4 11.2 92 2-144 80-172 (204)
30 1inl_A Spermidine synthase; be 97.9 1.5E-05 5.3E-10 81.8 6.5 110 2-149 117-232 (296)
31 1nv8_A HEMK protein; class I a 97.8 2.5E-05 8.6E-10 79.8 6.9 107 2-137 149-260 (284)
32 3e05_A Precorrin-6Y C5,15-meth 97.8 0.00017 5.8E-09 68.6 12.2 101 2-151 67-167 (204)
33 3mti_A RRNA methylase; SAM-dep 97.8 0.00018 6.3E-09 67.0 11.8 115 2-150 47-165 (185)
34 3eey_A Putative rRNA methylase 97.7 0.00014 5E-09 68.4 10.3 104 2-141 50-159 (197)
35 2f8l_A Hypothetical protein LM 97.7 8E-05 2.7E-09 77.6 9.2 113 2-141 162-275 (344)
36 3bt7_A TRNA (uracil-5-)-methyl 97.7 3.3E-05 1.1E-09 81.6 5.4 91 2-125 238-328 (369)
37 3tfw_A Putative O-methyltransf 97.6 0.00018 6.1E-09 71.4 9.0 82 2-127 91-174 (248)
38 1wy7_A Hypothetical protein PH 97.5 0.00025 8.6E-09 67.2 9.3 92 2-143 75-166 (207)
39 3gdh_A Trimethylguanosine synt 97.5 0.00019 6.4E-09 69.9 8.5 59 2-82 103-162 (241)
40 2gpy_A O-methyltransferase; st 97.5 0.00018 6E-09 70.0 8.0 81 2-126 81-163 (233)
41 3hm2_A Precorrin-6Y C5,15-meth 97.5 0.00037 1.3E-08 63.9 9.4 99 2-151 52-152 (178)
42 1yb2_A Hypothetical protein TA 97.5 0.00014 4.8E-09 73.0 6.9 96 2-151 138-234 (275)
43 3u81_A Catechol O-methyltransf 97.5 0.00026 8.9E-09 68.5 8.2 107 2-151 86-194 (221)
44 1l3i_A Precorrin-6Y methyltran 97.4 0.00068 2.3E-08 62.4 10.1 99 2-150 58-158 (192)
45 3a27_A TYW2, uncharacterized p 97.4 0.00032 1.1E-08 70.9 8.5 77 2-127 146-222 (272)
46 2ift_A Putative methylase HI07 97.4 0.00027 9.3E-09 67.7 7.1 84 2-127 79-167 (201)
47 1xdz_A Methyltransferase GIDB; 97.4 0.00049 1.7E-08 67.5 8.9 97 2-143 97-193 (240)
48 3grz_A L11 mtase, ribosomal pr 97.3 0.00061 2.1E-08 64.6 9.2 97 2-151 86-182 (205)
49 3p9n_A Possible methyltransfer 97.3 0.00047 1.6E-08 64.8 8.3 86 2-127 70-157 (189)
50 3c3y_A Pfomt, O-methyltransfer 97.3 0.00043 1.5E-08 68.2 8.3 86 2-127 98-185 (237)
51 3duw_A OMT, O-methyltransferas 97.3 0.00043 1.5E-08 66.5 7.9 85 2-127 86-171 (223)
52 1o54_A SAM-dependent O-methylt 97.3 0.00087 3E-08 67.1 10.2 96 2-151 140-236 (277)
53 3ntv_A MW1564 protein; rossman 97.3 0.001 3.5E-08 65.1 10.0 80 2-125 98-178 (232)
54 1dus_A MJ0882; hypothetical pr 97.3 0.0023 8E-08 58.8 11.8 84 2-128 77-162 (194)
55 2fpo_A Methylase YHHF; structu 97.2 0.00059 2E-08 65.4 8.0 84 2-128 80-165 (202)
56 4dzr_A Protein-(glutamine-N5) 97.2 9.1E-05 3.1E-09 69.7 2.0 118 2-140 57-178 (215)
57 3mb5_A SAM-dependent methyltra 97.2 0.0011 3.8E-08 64.9 9.9 90 2-143 121-211 (255)
58 1yzh_A TRNA (guanine-N(7)-)-me 97.2 0.0015 5.2E-08 62.6 10.3 90 2-124 68-157 (214)
59 3g89_A Ribosomal RNA small sub 97.2 0.00064 2.2E-08 67.9 7.7 97 2-143 107-203 (249)
60 2pwy_A TRNA (adenine-N(1)-)-me 97.1 0.0016 5.6E-08 63.5 9.6 77 2-126 124-201 (258)
61 2vdv_E TRNA (guanine-N(7)-)-me 97.1 0.0024 8.3E-08 62.8 10.8 110 2-148 76-194 (246)
62 3dh0_A SAM dependent methyltra 97.1 0.0047 1.6E-07 58.7 12.3 105 2-151 65-178 (219)
63 3c3p_A Methyltransferase; NP_9 97.1 0.00065 2.2E-08 64.9 6.3 79 2-127 84-164 (210)
64 2fca_A TRNA (guanine-N(7)-)-me 97.1 0.002 7E-08 62.2 9.8 90 2-124 65-154 (213)
65 3dr5_A Putative O-methyltransf 97.1 0.00095 3.2E-08 65.4 7.5 81 2-126 84-166 (221)
66 3dou_A Ribosomal RNA large sub 97.0 0.00092 3.2E-08 64.0 6.4 104 2-141 50-154 (191)
67 3vc1_A Geranyl diphosphate 2-C 96.9 0.0072 2.5E-07 61.4 12.6 83 2-128 143-226 (312)
68 1nt2_A Fibrillarin-like PRE-rR 96.8 0.0035 1.2E-07 60.7 9.4 103 2-152 84-193 (210)
69 3dxy_A TRNA (guanine-N(7)-)-me 96.8 0.0017 5.9E-08 63.4 7.2 91 2-125 61-152 (218)
70 1i9g_A Hypothetical protein RV 96.8 0.0029 9.8E-08 62.9 8.6 77 2-126 127-206 (280)
71 2yxd_A Probable cobalt-precorr 96.8 0.0041 1.4E-07 56.8 8.9 97 2-151 60-156 (183)
72 2ozv_A Hypothetical protein AT 96.8 0.0021 7.3E-08 64.2 7.4 104 2-123 63-170 (260)
73 3tr6_A O-methyltransferase; ce 96.7 0.0015 5E-08 62.7 5.5 84 2-126 92-177 (225)
74 3lbf_A Protein-L-isoaspartate 96.7 0.0041 1.4E-07 58.9 8.5 75 2-125 102-176 (210)
75 3tm4_A TRNA (guanine N2-)-meth 96.7 0.0057 2E-07 64.6 10.1 99 2-143 244-343 (373)
76 3f4k_A Putative methyltransfer 96.7 0.0077 2.6E-07 58.6 10.2 83 2-128 72-155 (257)
77 1o9g_A RRNA methyltransferase; 96.6 0.0021 7.3E-08 63.2 6.2 50 63-125 167-216 (250)
78 3dmg_A Probable ribosomal RNA 96.6 0.0056 1.9E-07 65.2 9.7 89 2-129 258-346 (381)
79 2h1r_A Dimethyladenosine trans 96.6 0.0019 6.6E-08 66.2 5.9 96 2-128 67-164 (299)
80 2esr_A Methyltransferase; stru 96.6 0.0019 6.4E-08 59.6 5.2 84 2-128 57-143 (177)
81 2okc_A Type I restriction enzy 96.5 0.0071 2.4E-07 65.3 10.0 111 2-142 211-329 (445)
82 2bm8_A Cephalosporin hydroxyla 96.5 0.0024 8.2E-08 63.1 5.8 103 2-151 112-216 (236)
83 1sui_A Caffeoyl-COA O-methyltr 96.5 0.0037 1.3E-07 62.1 7.1 83 2-124 107-191 (247)
84 2yvl_A TRMI protein, hypotheti 96.5 0.0047 1.6E-07 59.8 7.5 77 2-126 116-193 (248)
85 2b25_A Hypothetical protein; s 96.5 0.026 8.9E-07 58.1 13.5 75 2-122 133-218 (336)
86 1jsx_A Glucose-inhibited divis 96.5 0.0098 3.3E-07 56.0 9.3 78 2-127 92-169 (207)
87 2pbf_A Protein-L-isoaspartate 96.5 0.003 1E-07 60.7 5.8 78 2-124 112-194 (227)
88 1dl5_A Protein-L-isoaspartate 96.4 0.0062 2.1E-07 62.5 8.3 74 2-124 103-176 (317)
89 3jwh_A HEN1; methyltransferase 96.4 0.024 8.3E-07 53.9 11.9 112 2-154 56-194 (217)
90 1ws6_A Methyltransferase; stru 96.4 0.0037 1.3E-07 56.6 5.6 89 2-130 66-154 (171)
91 1xxl_A YCGJ protein; structura 96.3 0.033 1.1E-06 54.0 12.6 82 2-126 46-127 (239)
92 2ih2_A Modification methylase 96.3 0.0027 9.3E-08 66.9 5.1 87 63-151 97-192 (421)
93 3kkz_A Uncharacterized protein 96.3 0.01 3.6E-07 58.5 9.0 84 2-129 72-156 (267)
94 3jwg_A HEN1, methyltransferase 96.3 0.028 9.5E-07 53.5 11.7 114 2-156 56-196 (219)
95 3fpf_A Mtnas, putative unchara 96.3 0.011 3.8E-07 61.3 9.4 73 2-122 149-221 (298)
96 1g8a_A Fibrillarin-like PRE-rR 96.3 0.0053 1.8E-07 59.1 6.6 79 2-124 101-179 (227)
97 2avd_A Catechol-O-methyltransf 96.3 0.0038 1.3E-07 60.0 5.6 84 2-126 97-182 (229)
98 2kw5_A SLR1183 protein; struct 96.3 0.036 1.2E-06 51.9 12.0 83 2-128 54-136 (202)
99 1mjf_A Spermidine synthase; sp 96.3 0.0059 2E-07 61.9 6.8 85 2-126 101-196 (281)
100 3r3h_A O-methyltransferase, SA 96.2 0.0017 5.7E-08 64.5 2.5 84 2-125 88-172 (242)
101 3dlc_A Putative S-adenosyl-L-m 96.2 0.025 8.4E-07 53.0 10.4 94 2-138 69-163 (219)
102 2fhp_A Methylase, putative; al 96.2 0.0075 2.6E-07 55.5 6.7 89 2-128 70-159 (187)
103 3lcc_A Putative methyl chlorid 96.2 0.029 9.8E-07 54.1 10.9 106 2-151 91-204 (235)
104 1nkv_A Hypothetical protein YJ 96.1 0.028 9.7E-07 54.5 10.9 81 2-126 62-143 (256)
105 3ckk_A TRNA (guanine-N(7)-)-me 96.1 0.017 5.9E-07 57.0 9.3 91 2-125 73-170 (235)
106 2nxc_A L11 mtase, ribosomal pr 96.1 0.017 5.8E-07 57.4 9.1 97 2-151 145-241 (254)
107 4df3_A Fibrillarin-like rRNA/T 96.0 0.015 5.1E-07 58.2 8.4 78 2-123 105-182 (233)
108 3sm3_A SAM-dependent methyltra 96.0 0.035 1.2E-06 52.7 10.7 86 2-127 55-145 (235)
109 3cbg_A O-methyltransferase; cy 96.0 0.0075 2.6E-07 58.9 6.0 85 2-127 100-186 (232)
110 1zx0_A Guanidinoacetate N-meth 96.0 0.005 1.7E-07 59.9 4.5 87 2-125 86-172 (236)
111 1ve3_A Hypothetical protein PH 95.9 0.027 9.4E-07 53.4 9.4 83 2-126 63-145 (227)
112 2ipx_A RRNA 2'-O-methyltransfe 95.9 0.018 6E-07 55.8 8.2 78 2-123 105-182 (233)
113 2plw_A Ribosomal RNA methyltra 95.9 0.024 8.4E-07 53.0 8.8 65 63-141 105-169 (201)
114 2h00_A Methyltransferase 10 do 95.9 0.065 2.2E-06 52.4 12.0 127 2-150 92-237 (254)
115 2jjq_A Uncharacterized RNA met 95.8 0.031 1.1E-06 60.3 10.5 51 2-76 315-365 (425)
116 2xvm_A Tellurite resistance pr 95.8 0.038 1.3E-06 51.1 9.8 80 2-123 57-136 (199)
117 4dcm_A Ribosomal RNA large sub 95.8 0.027 9.1E-07 59.8 9.6 89 2-129 249-340 (375)
118 3hem_A Cyclopropane-fatty-acyl 95.8 0.045 1.5E-06 55.1 10.9 91 2-129 98-189 (302)
119 1zq9_A Probable dimethyladenos 95.8 0.0028 9.4E-08 64.5 1.7 91 2-126 53-149 (285)
120 1ej0_A FTSJ; methyltransferase 95.8 0.0083 2.8E-07 53.8 4.7 65 63-141 87-151 (180)
121 3ofk_A Nodulation protein S; N 95.7 0.047 1.6E-06 51.6 10.2 107 2-151 76-188 (216)
122 2yxe_A Protein-L-isoaspartate 95.7 0.027 9.3E-07 53.4 8.4 75 2-125 105-179 (215)
123 1kpg_A CFA synthase;, cyclopro 95.7 0.072 2.5E-06 52.8 11.8 82 2-127 90-172 (287)
124 1r18_A Protein-L-isoaspartate( 95.7 0.0068 2.3E-07 58.5 4.1 75 2-125 117-196 (227)
125 2ex4_A Adrenal gland protein A 95.7 0.061 2.1E-06 52.0 10.9 107 2-151 105-222 (241)
126 3g2m_A PCZA361.24; SAM-depende 95.7 0.034 1.2E-06 55.9 9.4 87 2-129 107-196 (299)
127 2p8j_A S-adenosylmethionine-de 95.6 0.034 1.2E-06 52.1 8.6 84 2-127 49-132 (209)
128 3adn_A Spermidine synthase; am 95.6 0.023 7.7E-07 58.4 7.8 104 2-143 110-220 (294)
129 3kr9_A SAM-dependent methyltra 95.6 0.12 4E-06 51.4 12.6 96 2-150 42-139 (225)
130 2pxx_A Uncharacterized protein 95.6 0.021 7.2E-07 53.5 6.9 95 2-126 68-162 (215)
131 1uwv_A 23S rRNA (uracil-5-)-me 95.5 0.064 2.2E-06 57.7 11.4 58 2-77 311-369 (433)
132 1ri5_A MRNA capping enzyme; me 95.5 0.047 1.6E-06 54.0 9.6 87 2-126 90-177 (298)
133 1vbf_A 231AA long hypothetical 95.5 0.015 5E-07 55.9 5.7 74 2-126 95-168 (231)
134 3orh_A Guanidinoacetate N-meth 95.5 0.014 4.8E-07 57.3 5.6 85 2-123 86-170 (236)
135 3g5l_A Putative S-adenosylmeth 95.4 0.098 3.3E-06 50.8 11.5 78 2-125 70-147 (253)
136 1xtp_A LMAJ004091AAA; SGPP, st 95.4 0.053 1.8E-06 52.4 9.4 99 2-143 119-229 (254)
137 4htf_A S-adenosylmethionine-de 95.4 0.031 1E-06 55.6 7.9 84 2-127 93-177 (285)
138 1vl5_A Unknown conserved prote 95.4 0.057 1.9E-06 52.8 9.7 81 2-125 62-142 (260)
139 2i7c_A Spermidine synthase; tr 95.4 0.014 4.9E-07 59.2 5.5 87 2-126 105-195 (283)
140 3ujc_A Phosphoethanolamine N-m 95.4 0.042 1.4E-06 53.3 8.6 83 2-127 81-163 (266)
141 1iy9_A Spermidine synthase; ro 95.4 0.033 1.1E-06 56.3 8.0 86 2-125 102-191 (275)
142 3h2b_A SAM-dependent methyltra 95.3 0.086 3E-06 49.3 10.3 102 2-151 66-179 (203)
143 1jg1_A PIMT;, protein-L-isoasp 95.3 0.037 1.3E-06 53.7 7.8 74 2-124 117-190 (235)
144 3ocj_A Putative exported prote 95.2 0.044 1.5E-06 55.4 8.4 84 2-126 146-230 (305)
145 1fbn_A MJ fibrillarin homologu 95.2 0.04 1.4E-06 53.3 7.8 77 2-122 101-177 (230)
146 2p41_A Type II methyltransfera 95.2 0.0095 3.3E-07 61.5 3.4 63 63-143 147-211 (305)
147 3dtn_A Putative methyltransfer 95.2 0.043 1.5E-06 52.6 7.8 83 2-128 71-153 (234)
148 2pt6_A Spermidine synthase; tr 95.1 0.024 8.4E-07 58.7 6.4 99 2-138 143-247 (321)
149 2ar0_A M.ecoki, type I restric 95.1 0.02 6.9E-07 63.7 6.1 112 2-141 214-333 (541)
150 2nyu_A Putative ribosomal RNA 95.1 0.04 1.4E-06 51.2 7.2 65 63-141 96-160 (196)
151 3m70_A Tellurite resistance pr 95.1 0.063 2.1E-06 53.4 8.9 78 2-122 145-222 (286)
152 3mgg_A Methyltransferase; NYSG 95.1 0.074 2.5E-06 52.3 9.4 79 2-123 64-142 (276)
153 2pjd_A Ribosomal RNA small sub 95.0 0.062 2.1E-06 55.7 9.1 87 2-129 223-309 (343)
154 3hnr_A Probable methyltransfer 95.0 0.087 3E-06 49.8 9.3 84 2-131 70-153 (220)
155 2o07_A Spermidine synthase; st 95.0 0.036 1.2E-06 57.0 7.0 87 2-126 122-212 (304)
156 3bus_A REBM, methyltransferase 94.9 0.099 3.4E-06 51.2 9.8 82 2-126 87-169 (273)
157 1ne2_A Hypothetical protein TA 94.9 0.048 1.7E-06 51.2 7.0 92 2-150 77-168 (200)
158 2hnk_A SAM-dependent O-methylt 94.9 0.028 9.5E-07 54.7 5.5 94 2-127 88-185 (239)
159 3l8d_A Methyltransferase; stru 94.8 0.15 5E-06 48.9 10.4 81 2-128 78-158 (242)
160 3d2l_A SAM-dependent methyltra 94.8 0.098 3.3E-06 50.0 9.2 83 2-125 57-139 (243)
161 2fk8_A Methoxy mycolic acid sy 94.8 0.12 4.1E-06 52.2 10.2 83 2-128 116-199 (318)
162 2qfm_A Spermine synthase; sper 94.7 0.042 1.4E-06 58.5 6.8 118 2-148 214-339 (364)
163 2o57_A Putative sarcosine dime 94.6 0.11 3.8E-06 51.8 9.4 82 2-126 108-190 (297)
164 2y1w_A Histone-arginine methyl 94.5 0.1 3.4E-06 54.3 8.9 95 2-139 76-173 (348)
165 1xj5_A Spermidine synthase 1; 94.4 0.043 1.5E-06 57.4 5.8 88 2-126 147-238 (334)
166 3ou2_A SAM-dependent methyltra 94.3 0.12 4.3E-06 48.3 8.5 79 2-126 71-149 (218)
167 3lkd_A Type I restriction-modi 94.2 0.17 5.8E-06 56.4 10.6 129 2-152 251-389 (542)
168 1uir_A Polyamine aminopropyltr 94.2 0.046 1.6E-06 56.3 5.7 90 2-126 104-198 (314)
169 2xyq_A Putative 2'-O-methyl tr 94.2 0.04 1.4E-06 56.7 5.2 66 63-142 122-187 (290)
170 2p35_A Trans-aconitate 2-methy 94.0 0.24 8E-06 47.9 9.9 89 2-139 60-148 (259)
171 3cvo_A Methyltransferase-like 93.9 0.17 5.8E-06 49.5 8.8 106 2-140 54-169 (202)
172 3g5t_A Trans-aconitate 3-methy 93.9 0.14 4.9E-06 51.2 8.5 86 2-125 64-151 (299)
173 2fyt_A Protein arginine N-meth 93.9 0.1 3.5E-06 54.2 7.6 92 2-134 90-184 (340)
174 3e23_A Uncharacterized protein 93.8 0.15 5E-06 48.1 7.9 94 2-143 68-172 (211)
175 3gu3_A Methyltransferase; alph 93.7 0.19 6.4E-06 50.2 8.9 79 2-125 50-128 (284)
176 2gs9_A Hypothetical protein TT 93.7 0.15 5E-06 48.0 7.7 78 2-127 59-136 (211)
177 2b2c_A Spermidine synthase; be 93.7 0.075 2.6E-06 55.0 6.1 87 2-126 135-225 (314)
178 3cgg_A SAM-dependent methyltra 93.7 0.24 8.2E-06 45.2 8.9 102 2-151 71-172 (195)
179 1wzn_A SAM-dependent methyltra 93.7 0.24 8.3E-06 47.8 9.4 80 2-123 66-145 (252)
180 3q7e_A Protein arginine N-meth 93.7 0.15 5E-06 53.2 8.3 85 2-127 92-177 (349)
181 3bwc_A Spermidine synthase; SA 93.6 0.088 3E-06 53.9 6.3 104 2-142 122-230 (304)
182 2yqz_A Hypothetical protein TT 93.5 0.19 6.4E-06 48.7 8.3 77 2-122 64-140 (263)
183 3bxo_A N,N-dimethyltransferase 93.5 0.19 6.5E-06 47.9 8.2 81 2-127 65-145 (239)
184 3lec_A NADB-rossmann superfami 93.5 0.57 2E-05 46.6 11.8 97 2-150 48-145 (230)
185 2cmg_A Spermidine synthase; tr 93.4 0.11 3.7E-06 52.3 6.6 74 2-126 97-174 (262)
186 1g6q_1 HnRNP arginine N-methyl 93.4 0.17 5.9E-06 52.1 8.2 98 2-140 64-164 (328)
187 3r0q_C Probable protein argini 93.3 0.15 5E-06 53.8 7.6 91 2-134 89-182 (376)
188 3gjy_A Spermidine synthase; AP 93.1 0.15 5E-06 53.3 7.2 110 2-149 116-226 (317)
189 1y8c_A S-adenosylmethionine-de 93.1 0.32 1.1E-05 46.3 9.0 83 2-125 62-144 (246)
190 3mq2_A 16S rRNA methyltransfer 93.0 0.53 1.8E-05 44.5 10.4 83 2-123 54-140 (218)
191 4fsd_A Arsenic methyltransfera 93.0 0.26 8.9E-06 51.8 8.9 88 2-126 111-206 (383)
192 3q87_B N6 adenine specific DNA 92.9 0.16 5.5E-06 46.9 6.4 100 2-151 47-146 (170)
193 2i62_A Nicotinamide N-methyltr 92.9 0.41 1.4E-05 46.3 9.6 88 2-124 82-199 (265)
194 2qy6_A UPF0209 protein YFCK; s 92.9 0.17 5.6E-06 51.1 6.9 58 64-149 173-230 (257)
195 3e8s_A Putative SAM dependent 92.8 0.37 1.3E-05 45.2 8.9 103 2-152 77-207 (227)
196 3i9f_A Putative type 11 methyl 92.8 0.31 1E-05 44.1 8.0 74 2-126 42-115 (170)
197 4gek_A TRNA (CMO5U34)-methyltr 92.6 0.21 7.4E-06 49.9 7.4 81 2-126 99-181 (261)
198 3b3j_A Histone-arginine methyl 92.6 0.15 5E-06 56.0 6.6 91 2-135 184-277 (480)
199 2r3s_A Uncharacterized protein 92.6 0.57 1.9E-05 47.4 10.6 84 2-128 192-276 (335)
200 1qzz_A RDMB, aclacinomycin-10- 92.4 0.88 3E-05 46.9 12.0 79 2-124 209-288 (374)
201 3g07_A 7SK snRNA methylphospha 92.3 0.25 8.6E-06 49.7 7.5 24 101-124 198-221 (292)
202 3bkw_A MLL3908 protein, S-aden 92.2 0.2 6.7E-06 47.9 6.3 77 2-124 69-145 (243)
203 3gnl_A Uncharacterized protein 91.8 1.3 4.4E-05 44.5 11.9 97 2-150 48-145 (244)
204 3m33_A Uncharacterized protein 91.8 0.095 3.2E-06 50.4 3.5 84 2-143 73-158 (226)
205 3bgv_A MRNA CAP guanine-N7 met 91.4 0.79 2.7E-05 46.2 10.0 92 2-126 60-158 (313)
206 3khk_A Type I restriction-modi 91.3 0.54 1.9E-05 52.3 9.4 119 2-142 286-417 (544)
207 3dp7_A SAM-dependent methyltra 91.1 1.5 5.3E-05 45.4 12.2 85 2-128 206-292 (363)
208 3i53_A O-methyltransferase; CO 90.9 2.7 9.1E-05 42.7 13.5 83 2-128 196-279 (332)
209 3thr_A Glycine N-methyltransfe 90.8 0.6 2E-05 46.2 8.3 92 2-125 82-177 (293)
210 1tw3_A COMT, carminomycin 4-O- 90.8 1.8 6.1E-05 44.4 12.1 80 2-125 210-290 (360)
211 1x19_A CRTF-related protein; m 90.8 1.1 3.8E-05 46.1 10.6 82 2-127 217-299 (359)
212 3p2e_A 16S rRNA methylase; met 90.4 0.16 5.6E-06 49.5 3.7 85 2-123 51-139 (225)
213 1vlm_A SAM-dependent methyltra 90.4 1.4 4.7E-05 41.8 10.1 75 3-127 69-143 (219)
214 1pjz_A Thiopurine S-methyltran 90.1 0.37 1.3E-05 45.7 5.9 86 2-127 47-144 (203)
215 2zfu_A Nucleomethylin, cerebra 89.8 0.77 2.6E-05 43.2 7.7 46 103-151 131-176 (215)
216 2p7i_A Hypothetical protein; p 89.6 0.57 2E-05 44.4 6.7 77 2-126 67-144 (250)
217 2a14_A Indolethylamine N-methy 89.3 2.1 7.2E-05 42.1 10.8 22 103-124 177-198 (263)
218 3bzb_A Uncharacterized protein 89.2 1.5 5.2E-05 43.8 9.7 88 2-127 105-209 (281)
219 3ll7_A Putative methyltransfer 89.2 0.28 9.6E-06 52.9 4.6 57 2-77 118-176 (410)
220 3ccf_A Cyclopropane-fatty-acyl 89.1 1.2 4E-05 43.9 8.8 76 2-126 82-157 (279)
221 1m6y_A S-adenosyl-methyltransf 88.9 0.27 9.3E-06 50.7 4.1 58 2-76 53-110 (301)
222 1p91_A Ribosomal RNA large sub 88.2 0.42 1.4E-05 46.7 4.8 70 2-126 112-181 (269)
223 3dli_A Methyltransferase; PSI- 87.8 2.3 8E-05 40.7 9.8 47 103-151 120-181 (240)
224 3pfg_A N-methyltransferase; N, 87.7 1 3.4E-05 43.8 7.2 78 2-124 75-152 (263)
225 3mcz_A O-methyltransferase; ad 87.7 1.5 5.1E-05 44.8 8.7 86 2-128 206-292 (352)
226 2oxt_A Nucleoside-2'-O-methylt 87.4 0.26 8.8E-06 49.7 2.7 68 63-149 139-210 (265)
227 3gwz_A MMCR; methyltransferase 87.2 6.9 0.00023 40.5 13.6 83 2-128 229-312 (369)
228 2gb4_A Thiopurine S-methyltran 87.1 0.98 3.3E-05 44.9 6.7 85 2-126 93-194 (252)
229 2vdw_A Vaccinia virus capping 86.8 2.7 9.2E-05 42.8 10.0 91 2-125 74-171 (302)
230 3o4f_A Spermidine synthase; am 86.5 1.6 5.5E-05 45.0 8.2 98 2-137 110-214 (294)
231 2wa2_A Non-structural protein 86.5 0.3 1E-05 49.5 2.7 47 63-125 147-195 (276)
232 3fzg_A 16S rRNA methylase; met 86.4 0.56 1.9E-05 46.0 4.3 73 2-120 76-149 (200)
233 3s1s_A Restriction endonucleas 86.1 0.47 1.6E-05 55.5 4.2 132 2-153 351-498 (878)
234 3htx_A HEN1; HEN1, small RNA m 85.9 3.2 0.00011 48.9 10.9 82 2-125 749-836 (950)
235 4hg2_A Methyltransferase type 85.7 0.97 3.3E-05 45.1 5.9 78 2-129 64-141 (257)
236 3bkx_A SAM-dependent methyltra 85.4 3.5 0.00012 40.1 9.6 86 2-127 71-163 (275)
237 3ldg_A Putative uncharacterize 85.3 4.3 0.00015 43.1 10.9 51 2-74 259-310 (384)
238 2g72_A Phenylethanolamine N-me 84.7 4.1 0.00014 40.3 9.9 48 102-151 194-253 (289)
239 3ggd_A SAM-dependent methyltra 84.6 1.7 5.9E-05 41.6 6.9 87 2-127 81-167 (245)
240 2avn_A Ubiquinone/menaquinone 84.4 1.4 4.7E-05 43.1 6.2 77 2-126 79-155 (260)
241 3iv6_A Putative Zn-dependent a 84.0 3.1 0.00011 41.9 8.7 93 2-137 70-162 (261)
242 2ip2_A Probable phenazine-spec 83.9 2 6.9E-05 43.5 7.4 82 2-127 194-276 (334)
243 1u2z_A Histone-lysine N-methyl 83.5 3.1 0.00011 45.1 9.0 81 2-122 269-358 (433)
244 3ege_A Putative methyltransfer 82.7 1.6 5.4E-05 42.7 5.8 74 2-125 59-132 (261)
245 3cc8_A Putative methyltransfer 81.6 2 6.8E-05 40.1 5.9 23 104-126 111-133 (230)
246 3sso_A Methyltransferase; macr 81.1 1.1 3.8E-05 48.4 4.3 76 2-124 250-325 (419)
247 2aot_A HMT, histamine N-methyl 80.4 4.4 0.00015 40.3 8.2 87 2-125 85-174 (292)
248 1af7_A Chemotaxis receptor met 80.1 2.2 7.7E-05 43.1 6.0 23 100-122 229-251 (274)
249 3ldu_A Putative methylase; str 79.5 2.8 9.6E-05 44.3 6.8 50 2-73 260-310 (385)
250 3k0b_A Predicted N6-adenine-sp 79.4 2.5 8.5E-05 45.0 6.3 51 2-74 266-317 (393)
251 2wk1_A NOVP; transferase, O-me 79.3 6.1 0.00021 40.3 9.0 96 11-151 173-271 (282)
252 2p38_A Protein involved in rib 79.0 6.9 0.00024 37.0 8.6 135 391-563 17-157 (166)
253 4hc4_A Protein arginine N-meth 78.3 3.7 0.00013 43.6 7.2 91 2-134 109-202 (376)
254 1sqw_A Saccharomyces cerevisia 77.2 1.6 5.6E-05 42.3 3.7 121 391-534 11-136 (188)
255 3uwp_A Histone-lysine N-methyl 75.6 4.2 0.00014 44.2 6.8 79 2-122 200-287 (438)
256 3ufb_A Type I restriction-modi 73.6 12 0.0004 41.4 9.9 126 2-151 257-392 (530)
257 3vyw_A MNMC2; tRNA wobble urid 72.6 5.2 0.00018 41.5 6.4 59 63-147 185-243 (308)
258 3v97_A Ribosomal RNA large sub 72.6 14 0.00049 42.1 10.6 89 2-124 259-348 (703)
259 3c6k_A Spermine synthase; sper 71.1 5.8 0.0002 42.4 6.4 111 2-142 231-350 (381)
260 2oyr_A UPF0341 protein YHIQ; a 70.9 2.8 9.6E-05 42.2 3.8 53 2-74 113-174 (258)
261 2qe6_A Uncharacterized protein 68.5 26 0.0009 34.7 10.4 94 2-127 107-200 (274)
262 3gru_A Dimethyladenosine trans 66.7 8.2 0.00028 39.5 6.3 49 2-73 75-123 (295)
263 3lcv_B Sisomicin-gentamicin re 66.4 14 0.00047 37.9 7.8 75 2-120 159-233 (281)
264 2oo3_A Protein involved in cat 60.2 1.6 5.6E-05 44.8 -0.4 53 2-73 116-168 (283)
265 2r6z_A UPF0341 protein in RSP 57.2 2.6 8.8E-05 42.1 0.5 54 2-74 108-171 (258)
266 1g60_A Adenine-specific methyl 56.8 13 0.00045 36.6 5.6 55 63-125 22-76 (260)
267 2ld4_A Anamorsin; methyltransf 56.1 16 0.00055 32.9 5.7 20 103-122 81-100 (176)
268 3frh_A 16S rRNA methylase; met 55.3 28 0.00094 35.2 7.6 75 2-120 129-203 (253)
269 3hp7_A Hemolysin, putative; st 54.1 14 0.0005 37.7 5.5 35 64-123 151-185 (291)
270 3ps9_A TRNA 5-methylaminomethy 51.8 15 0.00051 41.2 5.6 59 63-147 178-236 (676)
271 2zig_A TTHA0409, putative modi 51.3 11 0.00039 37.8 4.2 60 63-124 39-98 (297)
272 4a6d_A Hydroxyindole O-methylt 50.3 45 0.0015 34.2 8.6 35 87-128 254-288 (353)
273 1boo_A Protein (N-4 cytosine-s 48.0 19 0.00065 36.8 5.3 55 63-125 32-86 (323)
274 3opn_A Putative hemolysin; str 46.9 23 0.0008 34.3 5.5 35 64-123 103-137 (232)
275 3pvc_A TRNA 5-methylaminomethy 46.3 24 0.00083 39.7 6.2 59 63-147 170-228 (689)
276 1wg8_A Predicted S-adenosylmet 44.0 19 0.00064 37.0 4.4 55 2-76 47-101 (285)
277 4e2x_A TCAB9; kijanose, tetron 43.8 8 0.00027 40.4 1.7 23 103-125 188-210 (416)
278 1yub_A Ermam, rRNA methyltrans 43.7 3.5 0.00012 40.2 -1.1 54 2-78 54-107 (245)
279 2hwk_A Helicase NSP2; rossman 43.0 22 0.00077 36.7 4.7 75 63-150 205-280 (320)
280 3trk_A Nonstructural polyprote 42.8 26 0.0009 35.9 5.1 71 62-143 209-279 (324)
281 2hlg_A Fruit-specific protein; 42.8 8.5 0.00029 27.6 1.1 8 121-128 32-39 (39)
282 3g7u_A Cytosine-specific methy 41.6 20 0.0007 37.7 4.4 65 1-83 26-90 (376)
283 2c7p_A Modification methylase 36.4 39 0.0013 34.8 5.4 57 1-84 35-91 (327)
284 1g55_A DNA cytosine methyltran 35.3 16 0.00055 37.8 2.4 59 2-83 29-87 (343)
285 3tqs_A Ribosomal RNA small sub 31.8 64 0.0022 31.9 6.0 35 2-38 54-88 (255)
286 4gua_A Non-structural polyprot 31.3 66 0.0022 36.2 6.3 69 63-143 220-289 (670)
287 1eg2_A Modification methylase 31.2 47 0.0016 34.1 5.0 53 63-127 57-109 (319)
288 1m6y_A S-adenosyl-methyltransf 31.0 42 0.0014 34.2 4.6 35 104-141 226-260 (301)
289 1wg8_A Predicted S-adenosylmet 26.2 20 0.0007 36.7 1.2 35 104-141 214-248 (285)
290 3lst_A CALO1 methyltransferase 24.4 1E+02 0.0036 31.1 6.2 25 103-127 266-290 (348)
291 3eld_A Methyltransferase; flav 22.6 1.1E+02 0.0039 31.5 5.9 65 63-143 146-211 (300)
292 3ua3_A Protein arginine N-meth 21.6 57 0.002 37.7 3.8 101 2-139 449-552 (745)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1.2e-39 Score=346.65 Aligned_cols=123 Identities=30% Similarity=0.427 Sum_probs=113.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC------CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT------ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS 75 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~------~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCS 75 (620)
|+|||++.+|+..|.++++|++. .++.++++|+..++.. ....||+||||||||
T Consensus 175 l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~--------------------~~~~fD~VLlDaPCS 234 (359)
T 4fzv_A 175 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL--------------------EGDTYDRVLVDVPCT 234 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH--------------------STTCEEEEEEECCCC
T ss_pred EEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh--------------------ccccCCEEEECCccC
Confidence 79999999999999999999986 4799999999876531 126799999999999
Q ss_pred cc--cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCC
Q 007036 76 GD--GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 144 (620)
Q Consensus 76 Gd--GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~ 144 (620)
|+ |++|++|++|++|++.++..|+.+|++||.+|+++|||||+||||||||+|+|||+||++||+++++
T Consensus 235 g~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 235 TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp CHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred CCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 98 8889999999999999999999999999999999999999999999999999999999999998753
No 2
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.3e-37 Score=340.42 Aligned_cols=300 Identities=22% Similarity=0.371 Sum_probs=230.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..+.++++|+|+.|+.+++.|+..++.. ....||+|||||||||+|++|
T Consensus 145 V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~--------------------~~~~fD~Il~D~PcSg~G~~~ 204 (479)
T 2frx_A 145 ILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA--------------------VPEMFDAILLDAPCSGEGVVR 204 (479)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH--------------------STTCEEEEEEECCCCCGGGGG
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh--------------------ccccCCEEEECCCcCCccccc
Confidence 899999999999999999999999999999999775420 125699999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeCCCcCCCcccC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHR 161 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~~~~lp~l~~~ 161 (620)
++|+++..|++.++..|+.+|++||.+|+++|||||+|||||||++|+|||+||+++|+++++.++++++...+|
T Consensus 205 ~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~~----- 279 (479)
T 2frx_A 205 KDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFP----- 279 (479)
T ss_dssp TCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSST-----
T ss_pred CCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCceeccccccccc-----
Confidence 999998899999999999999999999999999999999999999999999999999999987667766543221
Q ss_pred CCccccccccCCccccchhhHHhhhccccCCCCCCCCCCCCCcCCCCCCCCCccccCCccccchhhcccccCCchhhhhc
Q 007036 162 PGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVS 241 (620)
Q Consensus 162 pGl~~W~v~~~~~~~~~~~~v~~~~~~~i~~smFp~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 241 (620)
|...|
T Consensus 280 -~~~~~-------------------------------------------------------------------------- 284 (479)
T 2frx_A 280 -GANKA-------------------------------------------------------------------------- 284 (479)
T ss_dssp -TGGGG--------------------------------------------------------------------------
T ss_pred -ccccc--------------------------------------------------------------------------
Confidence 11100
Q ss_pred cccccceEEEccccCCCCceEEEEEEEcCCCCccccccCCcccccCCCCCCCCccccCCcccccccccccccCCCCCCCC
Q 007036 242 DLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDP 321 (620)
Q Consensus 242 ~~~l~rCmRi~Ph~q~TGGFFVAvL~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (620)
+..+.|+|++||.++|+|||||+|+|.++.+.... +
T Consensus 285 -~~~~g~~r~~P~~~~~dGfF~A~l~k~~~~~~~~~-------------------------------------------~ 320 (479)
T 2frx_A 285 -LTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPA-------------------------------------------P 320 (479)
T ss_dssp -BCTTSCEEECTTTTTSCCEEEEEEEECSCCCCCCC-------------------------------------------C
T ss_pred -cccCCeEEECCCCCCcCccEEEEEEEcCCCCCccc-------------------------------------------c
Confidence 01246899999999999999999999764322000 0
Q ss_pred CcccccccCCCCCCCCCCCCCCcccccCCcccccCCCcccccccCCCcccccccCCcccCCCcccCC--ChhhHHHHHhH
Q 007036 322 EGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFN--DETIINSIKTF 399 (620)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~krk~~~~~~~k~~dP~vf~~--d~~~~~~I~~f 399 (620)
+.+.+ ..||..+. ..+.|+.+.++
T Consensus 321 ---------------------------------------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 346 (479)
T 2frx_A 321 ---------------------------------------------KYKVG---------NFPFSPVKDREAGQIRQAATG 346 (479)
T ss_dssp ---------------------------------------------CCCCC---------CCSCEECCHHHHHHHHHHHHT
T ss_pred ---------------------------------------------ccccc---------cCCccccchhhHHHHHHHHHH
Confidence 00000 01222222 22446777888
Q ss_pred hcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhcccCCCccEEEEceEeeEEEecCCCCCCCccceeeccCchh
Q 007036 400 YGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLP 479 (620)
Q Consensus 400 Ygi~~~Fp~~~~Lv~Rn~~g~~~k~IYyvS~~vk~il~~N~~~g~~lkii~~GvK~F~rq~~~~~~~~~C~~RI~qEGl~ 479 (620)
|+++.. .+..|+.|+ +.||++......++ .+|||++.|+++.+... =+||.++...-
T Consensus 347 ~~~~~~--~~~~~~~~~------~~~~~~p~~~~~~~-------~~lr~~r~G~~lg~~kk--------~rf~Ps~~la~ 403 (479)
T 2frx_A 347 VGLNWD--ENLRLWQRD------KELWLFPVGIEALI-------GKVRFSRLGIKLAETHN--------KGYRWQHEAVI 403 (479)
T ss_dssp TTBCCC--TTEEEEESS------SEEEEEEHHHHTTB-------TTBCCSEESEEEEEEET--------TEEEECHHHHH
T ss_pred cCCCCC--CCceEEEEC------CEEEEeccccchhc-------cCcEEEecceEEEEEec--------CCceEcHHHHH
Confidence 988633 234677663 58999988765432 46999999999998762 28999999998
Q ss_pred hhhhcccCcEEecCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEe
Q 007036 480 VILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLS 533 (620)
Q Consensus 480 ~l~p~i~kRiv~~~~~dl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~vl~~~ 533 (620)
.+.+.-.++++.++.++....|..+.+....- ..-|-++|.++
T Consensus 404 ~l~~~~~~~~~~l~~~~~~~yL~Ge~i~~~~~-----------~~~G~vlv~~~ 446 (479)
T 2frx_A 404 ALASPDNMNAFELTPQEAEEWYRGRDVYPQAA-----------PVADDVLVTFQ 446 (479)
T ss_dssp HHBCSSSSSEEECCHHHHHHHHTTCCCCCSSC-----------CSCSEEEEEET
T ss_pred hcchhhcCcEEECCHHHHHHHhcCCCCcCCCC-----------CCCCEEEEEEC
Confidence 88777778899999999999998766654311 13477777665
No 3
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=4.4e-35 Score=320.38 Aligned_cols=287 Identities=22% Similarity=0.362 Sum_probs=212.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..+.++++|+|..|+.+++.|+..++.. ....||+||+||||||+|++|
T Consensus 133 V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~--------------------~~~~FD~Il~DaPCSg~G~~r 192 (456)
T 3m4x_A 133 LVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH--------------------FSGFFDRIVVDAPCSGEGMFR 192 (456)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH--------------------HTTCEEEEEEECCCCCGGGTT
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh--------------------ccccCCEEEECCCCCCccccc
Confidence 899999999999999999999999999999999775320 125799999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeCCCcCCCcccC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHR 161 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~~~~lp~l~~~ 161 (620)
++|+++..|++.++..++.+|++||.+|+++|||||+|||||||++|+|||+||+++|++++ ++++++.. .++ ..
T Consensus 193 r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~--~~l~~~~~-~~~--~~ 267 (456)
T 3m4x_A 193 KDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP--VTIEEIPL-TQS--VS 267 (456)
T ss_dssp TCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--EEEECCCC-SSC--CE
T ss_pred cCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC--CEEEeccc-ccc--cc
Confidence 99999889999999999999999999999999999999999999999999999999999996 99998853 222 23
Q ss_pred CCccccccccCCccccchhhHHhhhccccCCCCCCCCCCCCCcCCCCCCCCCccccCCccccchhhcccccCCchhhhhc
Q 007036 162 PGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVS 241 (620)
Q Consensus 162 pGl~~W~v~~~~~~~~~~~~v~~~~~~~i~~smFp~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 241 (620)
+|+..|... +
T Consensus 268 ~~~~~~~~~-------------------------~--------------------------------------------- 277 (456)
T 3m4x_A 268 SGRSEWGSV-------------------------A--------------------------------------------- 277 (456)
T ss_dssp ECCGGGSSS-------------------------T---------------------------------------------
T ss_pred ccccccccc-------------------------c---------------------------------------------
Confidence 444444200 0
Q ss_pred cccccceEEEccccCCCCceEEEEEEEcCCCCccccccCCcccccCCCCCCCCccccCCcccccccccccccCCCCCCCC
Q 007036 242 DLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDP 321 (620)
Q Consensus 242 ~~~l~rCmRi~Ph~q~TGGFFVAvL~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (620)
.++.|+|++||.++|.|||||+|+|.+..+.. +..
T Consensus 278 --~~~~~~r~~P~~~~~dGFF~A~l~k~~~~~~~------~~~------------------------------------- 312 (456)
T 3m4x_A 278 --GLEKTIRIWPHKDQGEGHFVAKLTFHGQNQMH------KEK------------------------------------- 312 (456)
T ss_dssp --TGGGSEEECTTTSSSSCEEEEEEEECSCCCCC------C---------------------------------------
T ss_pred --ccCCeEEECCCCCCCcCeEEEEEEECCCCccc------ccc-------------------------------------
Confidence 14579999999999999999999997652100 000
Q ss_pred CcccccccCCCCCCCCCCCCCCcccccCCcccccCCCcccccccCCCcccccccCCcccCCCcccCCChhhHHHHHhHhc
Q 007036 322 EGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFNDETIINSIKTFYG 401 (620)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~krk~~~~~~~k~~dP~vf~~d~~~~~~I~~fYg 401 (620)
......+.+ ..+ ...+.|+....-|+
T Consensus 313 -----------------------------------------~~~~~~~~~---------~~~----~~~~~~~~~~~~~~ 338 (456)
T 3m4x_A 313 -----------------------------------------KTRKKSKVQ---------MTK----EQEKLWTEFSNDFH 338 (456)
T ss_dssp ------------------------------------------------CS---------CCH----HHHHHHHHHHHHTT
T ss_pred -----------------------------------------ccccccccc---------CcH----HHHHHHHHHHHHhc
Confidence 000000000 000 01123444444444
Q ss_pred CCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhcccCCCccEEEEceEeeEEEecCCCCCCCccceeeccCchhhh
Q 007036 402 IDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVI 481 (620)
Q Consensus 402 i~~~Fp~~~~Lv~Rn~~g~~~k~IYyvS~~vk~il~~N~~~g~~lkii~~GvK~F~rq~~~~~~~~~C~~RI~qEGl~~l 481 (620)
+. + ...++.++ ..||++-....+ -.+|||+..|+++=+-.. =+|+.++...-.+
T Consensus 339 ~~---~-~~~~~~~~------~~~~~~p~~~~~--------~~~l~~~r~G~~lg~~kk--------~~f~p~~~la~~l 392 (456)
T 3m4x_A 339 YE---A-TGRLLVFN------DHLWEVPELAPS--------LDGLKVVRTGLHLGDFKK--------NRFEPSYALALAT 392 (456)
T ss_dssp CC---C-CSEEEEET------TEEEEECTTCCC--------CTTCCEEEESEEEEEEET--------TEEEECHHHHHTC
T ss_pred cC---C-CCceEEEC------CEEEEeccCccc--------ccCCeEEEcCceeeEEeC--------CceeECHHHHHhc
Confidence 42 2 23565553 589988765321 157999999999977541 2788888877766
Q ss_pred hhcccCcEEecCHHHHHHHhhcCCCCc
Q 007036 482 LPYITKQILYASLVDFKHLLQYKTIKF 508 (620)
Q Consensus 482 ~p~i~kRiv~~~~~dl~~LL~~~~~~~ 508 (620)
.+--.++.+.++.++....|..+.+..
T Consensus 393 ~~~~~~~~~~l~~~~~~~yl~ge~i~~ 419 (456)
T 3m4x_A 393 KKIENIPCLPITQKEWQSYTAGETFQR 419 (456)
T ss_dssp CCGGGSCEEEECHHHHHHHHHTCCEEC
T ss_pred CccccCcEEEcCHHHHHHHhCCCCccc
Confidence 665556789999999999998766543
No 4
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=3.4e-35 Score=306.45 Aligned_cols=132 Identities=22% Similarity=0.243 Sum_probs=104.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..++++++|+|..|+.+++.|+..++.. ......||+||+||||||+|++|
T Consensus 130 V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~------------------~~~~~~fD~Vl~D~PcSg~G~~~ 191 (309)
T 2b9e_A 130 IFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS------------------DPRYHEVHYILLDPSCSGSGMPS 191 (309)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT------------------CGGGTTEEEEEECCCCCC-----
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc------------------ccccCCCCEEEEcCCcCCCCCCc
Confidence 899999999999999999999999999999999876421 00124699999999999999999
Q ss_pred cCccc-cc-ccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeCC
Q 007036 82 KAPDI-WR-KWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 152 (620)
Q Consensus 82 K~pdi-w~-~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~~ 152 (620)
|+|++ |. .|++.++..|+.+|++||.+|+++|+ ||+|||||||++|+|||+||.++|+++++.++++++.
T Consensus 192 r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~~ 263 (309)
T 2b9e_A 192 RQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPAL 263 (309)
T ss_dssp -------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCCC
T ss_pred cCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEeccc
Confidence 99998 43 57889999999999999999999998 9999999999999999999999999998668988763
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=3.6e-33 Score=290.57 Aligned_cols=170 Identities=31% Similarity=0.486 Sum_probs=141.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..++++++++|..|+.+++.|+..++.. ...||+||+|+||||.|+++
T Consensus 146 v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~---------------------~~~fD~Il~d~Pcsg~g~~~ 204 (315)
T 1ixk_A 146 IYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL---------------------NVEFDKILLDAPCTGSGTIH 204 (315)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG---------------------CCCEEEEEEECCTTSTTTCC
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc---------------------cccCCEEEEeCCCCCccccc
Confidence 899999999999999999999999999999999876421 14699999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeCCCcCCCcccC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHR 161 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~~~~lp~l~~~ 161 (620)
++|+++..|++.++..++.+|.++|.+++++|||||+|||||||++|+|||+||+++|++++ ++++++.. ..
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~--~~~~~~~~------~~ 276 (315)
T 1ixk_A 205 KNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD--VELLPLKY------GE 276 (315)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--EEEECCCS------SE
T ss_pred CChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC--CEEecCCc------cc
Confidence 99999889999999999999999999999999999999999999999999999999999874 88887741 23
Q ss_pred CCccccccccCCccccchhhHHhhhccccCCCCCCCCCCCCCcCCCCCCCCCccccCCccccchhhcccccCCchhhhhc
Q 007036 162 PGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVS 241 (620)
Q Consensus 162 pGl~~W~v~~~~~~~~~~~~v~~~~~~~i~~smFp~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 241 (620)
+|+..|.... |. .
T Consensus 277 ~~~~~~~~~~-----------------------~~-----------------------------------------~--- 289 (315)
T 1ixk_A 277 PALTNPFGIE-----------------------LS-----------------------------------------E--- 289 (315)
T ss_dssp ECCSSGGGCC-----------------------CC-----------------------------------------G---
T ss_pred cCcccccccc-----------------------cc-----------------------------------------c---
Confidence 6776664210 11 0
Q ss_pred cccccceEEEccccCCCCceEEEEEEEc
Q 007036 242 DLPLERCMRLVPHDQNSGAFFIAVLQKV 269 (620)
Q Consensus 242 ~~~l~rCmRi~Ph~q~TGGFFVAvL~K~ 269 (620)
.+++|+|++||.++|+|||||+|+|+
T Consensus 290 --~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 290 --EIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp --GGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred --ccCCEEEECCCCCCcccEEEEEEEEC
Confidence 14689999999999999999999984
No 6
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.98 E-value=1.4e-32 Score=301.19 Aligned_cols=175 Identities=31% Similarity=0.502 Sum_probs=149.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..+.++++|+|.. +.+++.|+..++.. ....||+||+||||||.|++|
T Consensus 129 V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~--------------------~~~~FD~Il~D~PcSg~G~~r 187 (464)
T 3m6w_A 129 LLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA--------------------FGTYFHRVLLDAPCSGEGMFR 187 (464)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH--------------------HCSCEEEEEEECCCCCGGGTT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh--------------------ccccCCEEEECCCcCCccccc
Confidence 899999999999999999999998 99999998775420 125799999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeCCCcCCCcccC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHR 161 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~~~~lp~l~~~ 161 (620)
++|++...|++.++..++.+|.+||.+|+++|||||+|||||||++|+|||+||+++|++++ .++++++.... + ..
T Consensus 188 r~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~-~~~l~~~~~~~-~--~~ 263 (464)
T 3m6w_A 188 KDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP-EFRLEDARLHP-L--FA 263 (464)
T ss_dssp TCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT-TEEEECCCCST-T--SE
T ss_pred cChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCC-CcEEEeccccc-c--cc
Confidence 99999889999999999999999999999999999999999999999999999999999996 48998875321 1 23
Q ss_pred CCccccccccCCccccchhhHHhhhccccCCCCCCCCCCCCCcCCCCCCCCCccccCCccccchhhcccccCCchhhhhc
Q 007036 162 PGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVS 241 (620)
Q Consensus 162 pGl~~W~v~~~~~~~~~~~~v~~~~~~~i~~smFp~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 241 (620)
+|...|... .
T Consensus 264 ~~~~~~~~~------------------------------------------------------------------~---- 273 (464)
T 3m6w_A 264 PGVPEWGEG------------------------------------------------------------------N---- 273 (464)
T ss_dssp ECCGGGTTT------------------------------------------------------------------C----
T ss_pred cCccccccc------------------------------------------------------------------c----
Confidence 454444200 0
Q ss_pred cccccceEEEccccCCCCceEEEEEEEcCCC
Q 007036 242 DLPLERCMRLVPHDQNSGAFFIAVLQKVSPL 272 (620)
Q Consensus 242 ~~~l~rCmRi~Ph~q~TGGFFVAvL~K~~~~ 272 (620)
..++.|+|++||.++|.|||||+|+|.+..
T Consensus 274 -~~~~~~~r~~P~~~~~dGfF~A~l~k~~~~ 303 (464)
T 3m6w_A 274 -PELLKTARLWPHRLEGEGHFLARFRKEGGA 303 (464)
T ss_dssp -GGGGGSEEECTTTSSSSCEEEEEEEECSCC
T ss_pred -cccCCeEEECCCCCCceeEEEEEEEECCCC
Confidence 114679999999999999999999998663
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.96 E-value=2.1e-29 Score=274.35 Aligned_cols=130 Identities=30% Similarity=0.436 Sum_probs=118.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..+.++++|+|..|+.+++.|+..++.. .....||+||+||||||.|+++
T Consensus 287 v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-------------------~~~~~fD~Vl~D~Pcsg~g~~~ 347 (450)
T 2yxl_A 287 IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI-------------------IGEEVADKVLLDAPCTSSGTIG 347 (450)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS-------------------SCSSCEEEEEEECCCCCGGGTT
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh-------------------hccCCCCEEEEcCCCCCCeeec
Confidence 799999999999999999999999999999999876521 0115699999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
++|++++.|++.++..++.+|.+||.+++++|||||+|||||||++|+|||++|.++|+++++ ++++++
T Consensus 348 ~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~-~~~~~~ 416 (450)
T 2yxl_A 348 KNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE-FKLVPL 416 (450)
T ss_dssp TSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSS-CEECCC
T ss_pred cChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCC-CEEeec
Confidence 999997789999999999999999999999999999999999999999999999999999874 676654
No 8
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.96 E-value=1.3e-29 Score=257.94 Aligned_cols=139 Identities=30% Similarity=0.414 Sum_probs=109.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..++++++++|..|+.+++.|+..++... ......||+||+|+||||.|+++
T Consensus 111 v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~-----------------~~~~~~fD~Vl~d~Pcs~~g~~~ 173 (274)
T 3ajd_A 111 IVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL-----------------LKNEIFFDKILLDAPCSGNIIKD 173 (274)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-----------------HHTTCCEEEEEEEECCC------
T ss_pred EEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh-----------------hhccccCCEEEEcCCCCCCcccc
Confidence 7999999999999999999999999999999987653100 00125799999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeCCCcCCCcccC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHR 161 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~~~~lp~l~~~ 161 (620)
++| .|++.++..++..|.++|.+++++|||||+|||||||++|+|||+||+++|++++ .++++++. ++ ..
T Consensus 174 ~~p----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~-~~~~~~~~--~~---~~ 243 (274)
T 3ajd_A 174 KNR----NVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRN-DVELIIIK--AN---EF 243 (274)
T ss_dssp ----------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCS-SEEEECCC--ST---TC
T ss_pred cCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCC-CcEEecCc--cc---cc
Confidence 998 7889999999999999999999999999999999999999999999999999986 58998875 22 23
Q ss_pred CCcccc
Q 007036 162 PGLRKW 167 (620)
Q Consensus 162 pGl~~W 167 (620)
+|+..|
T Consensus 244 ~~~~~~ 249 (274)
T 3ajd_A 244 KGINIK 249 (274)
T ss_dssp TTSCEE
T ss_pred cCcccc
Confidence 566655
No 9
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.95 E-value=9.8e-28 Score=259.32 Aligned_cols=127 Identities=33% Similarity=0.455 Sum_probs=113.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|++..|+..+.++++++|.. +.+.+.|+..++.. .....||+||+|+||||.|+++
T Consensus 273 v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~-------------------~~~~~fD~Vl~D~Pcsg~g~~~ 332 (429)
T 1sqg_A 273 VVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQW-------------------CGEQQFDRILLDAPCSATGVIR 332 (429)
T ss_dssp EEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHHH-------------------HTTCCEEEEEEECCCCCGGGTT
T ss_pred EEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchhh-------------------cccCCCCEEEEeCCCCcccccC
Confidence 799999999999999999999984 67888888765410 1125799999999999999999
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELV 149 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLv 149 (620)
++|++++.|++.++..++.+|.+||.+++++|||||+|||||||++|+|||++|.++|+++++ ++++
T Consensus 333 ~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~-~~~~ 399 (429)
T 1sqg_A 333 RHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELC 399 (429)
T ss_dssp TCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTT-CEEC
T ss_pred CCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCC-CEEe
Confidence 999997788999999999999999999999999999999999999999999999999999864 5544
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.82 E-value=1.1e-08 Score=109.74 Aligned_cols=116 Identities=18% Similarity=0.150 Sum_probs=91.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|+++..+..+++|+++.|..+ .+.+.|+..+... . ...||.|++|+||-..
T Consensus 239 V~avDis~~al~~a~~n~~~ng~~~-~~~~~D~~~~l~~-------------------~-~~~fD~Ii~dpP~f~~---- 293 (393)
T 4dmg_A 239 ALAVDKDLEALGVLDQAALRLGLRV-DIRHGEALPTLRG-------------------L-EGPFHHVLLDPPTLVK---- 293 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCC-EEEESCHHHHHHT-------------------C-CCCEEEEEECCCCCCS----
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCC-cEEEccHHHHHHH-------------------h-cCCCCEEEECCCcCCC----
Confidence 7999999999999999999999874 3457777553210 0 1239999999999321
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccH--HHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE--AVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENE--aVV~~~L~~~~~~~eLvd~ 151 (620)
+..........+.+++..|+++|||||+|+|+|||.++.+++ .+|..++.+.+..++++..
T Consensus 294 ---------~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~ 356 (393)
T 4dmg_A 294 ---------RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHRV 356 (393)
T ss_dssp ---------SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEEE
Confidence 233566778889999999999999999999999999999988 7888888776656666653
No 11
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.75 E-value=4.3e-08 Score=104.10 Aligned_cols=120 Identities=23% Similarity=0.213 Sum_probs=95.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+...++++++.|..|+.+...|+..+... .......||.|++|+|+.+.+
T Consensus 234 v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~-----------------~~~~~~~fD~Ii~dpP~~~~~--- 293 (382)
T 1wxx_A 234 VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRR-----------------LEKEGERFDLVVLDPPAFAKG--- 293 (382)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCCCSCCS---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHH-----------------HHhcCCCeeEEEECCCCCCCC---
Confidence 789999999999999999999998898999888654210 000125799999999986532
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhcc--HHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN--EAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~EN--EaVV~~~L~~~~~~~eLvd~ 151 (620)
..........+.++|..++++|+|||+|+|||||.+..++ +.+|..++.+.+..++++..
T Consensus 294 ----------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 294 ----------KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp ----------TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 2234566788899999999999999999999999888775 67888777777667777764
No 12
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.69 E-value=3.8e-08 Score=98.68 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=79.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.++..|....++. +|+.+...|+....... .....||.|++|++
T Consensus 104 V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~------------------~~~~~~D~I~~d~a-------- 155 (232)
T 3id6_C 104 AYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYK------------------SVVENVDVLYVDIA-------- 155 (232)
T ss_dssp EEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTT------------------TTCCCEEEEEECCC--------
T ss_pred EEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhh------------------ccccceEEEEecCC--------
Confidence 899999999987777666553 68999999987632110 01257999999977
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHh-hcccCCEEEEe---ec---CCChhccHHHHHHHHHhCCCceEEeeCCCc
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGIS-LLKVGGRIVYS---TC---SMNPVENEAVVAEILRKCEGSVELVDVSNE 154 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~-lLk~GG~LVYS---TC---SlnP~ENEaVV~~~L~~~~~~~eLvd~~~~ 154 (620)
+..|.++|...+. +|||||++|+| || +++|+||.+.+.++|++++ |++++....
T Consensus 156 -----------------~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~g--f~~~~~~~l 216 (232)
T 3id6_C 156 -----------------QPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSN--FETIQIINL 216 (232)
T ss_dssp -----------------CTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTT--EEEEEEEEC
T ss_pred -----------------ChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 1346777766655 99999999976 99 9999999999999999874 887776443
Q ss_pred CC
Q 007036 155 VP 156 (620)
Q Consensus 155 lp 156 (620)
.|
T Consensus 217 ~p 218 (232)
T 3id6_C 217 DP 218 (232)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.52 E-value=3.4e-07 Score=97.42 Aligned_cols=119 Identities=16% Similarity=0.074 Sum_probs=91.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+++..+..+++++++.|.. ++.+...|+..+.... ......||.|++|+|+.+.+
T Consensus 243 v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~-----------------~~~~~~fD~Vi~dpP~~~~~-- 303 (396)
T 2as0_A 243 VIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKL-----------------QKKGEKFDIVVLDPPAFVQH-- 303 (396)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH-----------------HHTTCCEEEEEECCCCSCSS--
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHH-----------------HhhCCCCCEEEECCCCCCCC--
Confidence 799999999999999999999987 8999998886542100 00125799999999975531
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhc--cHHHHHHHHHhCCCceEEee
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE--NEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~E--NEaVV~~~L~~~~~~~eLvd 150 (620)
..........+.++|..++++|+|||+|+|+|||.+..+ .+.+|..++...+..++++.
T Consensus 304 -----------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 304 -----------EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp -----------GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 223445567788999999999999999999999976544 57788877777665666665
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.47 E-value=3e-07 Score=98.01 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=91.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-C-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-A-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|+|+++..+..+++|+++.|. . ++.+...|+..+... .......||.|++|+|+.+-+.
T Consensus 246 V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~-----------------~~~~~~~fD~Ii~dpP~~~~~~ 308 (396)
T 3c0k_A 246 VVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRT-----------------YRDRGEKFDVIVMDPPKFVENK 308 (396)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCSSTTTCS
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHH-----------------HHhcCCCCCEEEECCCCCCCCh
Confidence 79999999999999999999998 6 899999988654210 0001257999999999865421
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh--ccHHHHHHHHHhCCCceEEeeC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV--ENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~--ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
.........+.+++..++++|+|||+|++|+|+.... +++.+|..++.+.+..++++..
T Consensus 309 -------------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 309 -------------SQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp -------------SSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred -------------hHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 1223344567899999999999999999999997765 7789998877776656776653
No 15
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.35 E-value=2.4e-07 Score=98.99 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=76.4
Q ss_pred EEEEcCChhHHHHHHHHHHHh---------------CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM---------------CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFD 66 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl---------------g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FD 66 (620)
|+|+|+++.++.++++|+++. |..++.+++.|+..+.. .....||
T Consensus 74 V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~--------------------~~~~~fD 133 (378)
T 2dul_A 74 VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA--------------------ERHRYFH 133 (378)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH--------------------HSTTCEE
T ss_pred EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH--------------------hccCCCC
Confidence 799999999999999999999 88789999999866421 0024699
Q ss_pred EEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 67 RVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 67 rILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
.|++|+||+. ..+|..|+++||+|| ++|.||+-....+.......+++++
T Consensus 134 ~I~lDP~~~~--------------------------~~~l~~a~~~lk~gG-~l~vt~td~~~l~~~~~~~~~~~yg 183 (378)
T 2dul_A 134 FIDLDPFGSP--------------------------MEFLDTALRSAKRRG-ILGVTATDGAPLCGAHPRACLRKYL 183 (378)
T ss_dssp EEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHHS
T ss_pred EEEeCCCCCH--------------------------HHHHHHHHHhcCCCC-EEEEEeecchhhccccHHHHHHHcc
Confidence 9999999873 378999999999999 7999998776555445566666665
No 16
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.32 E-value=1.2e-06 Score=100.68 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=82.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC--cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|+|+++..+...++|+++.|.. ++.+.+.|+..+.. .....||.|++|+||.+.+.
T Consensus 565 V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~--------------------~~~~~fD~Ii~DPP~f~~~~ 624 (703)
T 3v97_A 565 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR--------------------EANEQFDLIFIDPPTFSNSK 624 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHH--------------------HCCCCEEEEEECCCSBC---
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHH--------------------hcCCCccEEEECCccccCCc
Confidence 799999999999999999999986 79999998865311 01257999999999976542
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
+.. ........+.+|+..++++|+|||+|+||||+-.-..+++ .|.+.+ +++.++
T Consensus 625 --~~~---------~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~----~l~~~g--~~~~~i 679 (703)
T 3v97_A 625 --RME---------DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD----GLAKLG--LKAQEI 679 (703)
T ss_dssp ---------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHH----HHHHTT--EEEEEC
T ss_pred --cch---------hHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHH----HHHHcC--Cceeee
Confidence 111 1224556789999999999999999999999955555543 445554 454444
No 17
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.25 E-value=6.6e-07 Score=96.19 Aligned_cols=96 Identities=19% Similarity=0.103 Sum_probs=75.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc--EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n--v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|+|+++..++++++|+++.|+.+ +.+++.|+..+... .....||+|++|++|+.
T Consensus 80 V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~-------------------~~~~~fD~V~lDP~g~~--- 137 (392)
T 3axs_A 80 AYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRK-------------------EWGFGFDYVDLDPFGTP--- 137 (392)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHS-------------------CCSSCEEEEEECCSSCC---
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH-------------------hhCCCCcEEEECCCcCH---
Confidence 7999999999999999999999987 99999998654210 00146999999997541
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
..+|..|+++|++|| ++|+||+-...-....+...+++++
T Consensus 138 -----------------------~~~l~~a~~~Lk~gG-ll~~t~t~~~~l~g~~~~~~~rkYg 177 (392)
T 3axs_A 138 -----------------------VPFIESVALSMKRGG-ILSLTATDTAPLSGTYPKTCMRRYM 177 (392)
T ss_dssp -----------------------HHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHHS
T ss_pred -----------------------HHHHHHHHHHhCCCC-EEEEEecchhhhccccHHHHHHHhC
Confidence 248889999999988 8999998766544445566777776
No 18
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.25 E-value=4.3e-06 Score=84.84 Aligned_cols=100 Identities=22% Similarity=0.272 Sum_probs=80.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|+|+++.-+..+++++++.+..+ +.+.+.|+..++. ...||.|++|+|++.
T Consensus 151 V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----------------------~~~fD~Vi~~~p~~~---- 204 (278)
T 2frn_A 151 VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----------------------ENIADRILMGYVVRT---- 204 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----------------------CSCEEEEEECCCSSG----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc----------------------cCCccEEEECCchhH----
Confidence 8999999999999999999999876 8899999987652 257999999999543
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC---ChhccHHHHHHHHHhCCCceEEe
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM---NPVENEAVVAEILRKCEGSVELV 149 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl---nP~ENEaVV~~~L~~~~~~~eLv 149 (620)
..+|..++++|||||++++++|+- .+.+..+.+..++++.+-.++.+
T Consensus 205 ----------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 205 ----------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp ----------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred ----------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 456778899999999999999984 23455566778888876555553
No 19
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.19 E-value=4.2e-06 Score=87.50 Aligned_cols=98 Identities=27% Similarity=0.331 Sum_probs=79.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+|+..+...+.|+++.|..++.+.+.|+..++.. ...||.|++|+||.-
T Consensus 231 v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~---------------------~~~~D~Ii~npPyg~----- 284 (354)
T 3tma_A 231 VYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF---------------------FPEVDRILANPPHGL----- 284 (354)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT---------------------CCCCSEEEECCCSCC-----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc---------------------cCCCCEEEECCCCcC-----
Confidence 789999999999999999999988999999999886521 134899999999831
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHH
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILR 140 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~ 140 (620)
.......+..++.+++..+.++|||||++++.|| |+..+..+++
T Consensus 285 ---------r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------~~~~~~~~~~ 328 (354)
T 3tma_A 285 ---------RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------RPALLKRALP 328 (354)
T ss_dssp -------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------CHHHHHHHCC
T ss_pred ---------ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------CHHHHHHHhh
Confidence 1122356788899999999999999999999999 4666777765
No 20
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.17 E-value=4.5e-06 Score=87.43 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=81.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc--EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n--v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|.|+++..+..+++|++..+..+ +.+.+.|+..+... .......||.|++|+||.+.+.
T Consensus 178 V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~-----------------~~~~~~~fD~Ii~dPP~~~~~~ 240 (332)
T 2igt_A 178 VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQR-----------------EERRGSTYDIILTDPPKFGRGT 240 (332)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHH-----------------HHHHTCCBSEEEECCCSEEECT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHH-----------------HHhcCCCceEEEECCccccCCc
Confidence 7999999999999999999999875 88998888654210 0001257999999999988752
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCE-EEEeecCCCh--hccHHHHHHHHHhCCCceE
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR-IVYSTCSMNP--VENEAVVAEILRKCEGSVE 147 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~-LVYSTCSlnP--~ENEaVV~~~L~~~~~~~e 147 (620)
- .++| .......++|..++++|+|||. ++.++|+... .+=+.++..++.+.+..++
T Consensus 241 ~---~~~~---------~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 241 H---GEVW---------QLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp T---CCEE---------EHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred h---HHHH---------HHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 1 1121 2345567899999999999999 6667777653 2233445544445554444
No 21
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.16 E-value=1.6e-05 Score=84.04 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=76.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...+.++++.|..++.+...|+.. +|.. ....||.|++|+||+..
T Consensus 198 v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~--------------------~~~~fD~Vi~~~p~~~~--- 254 (373)
T 2qm3_A 198 IAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY--------------------ALHKFDTFITDPPETLE--- 254 (373)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT--------------------TSSCBSEEEECCCSSHH---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh--------------------ccCCccEEEECCCCchH---
Confidence 78999999999999999999998889999999977 4420 01469999999998742
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCE-EEEeecC--CChhccHHHHHHHHH-hCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR-IVYSTCS--MNPVENEAVVAEILR-KCE 143 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~-LVYSTCS--lnP~ENEaVV~~~L~-~~~ 143 (620)
. -..+|.+++++|||||+ ++|++|+ -++.+. ..|..++. +.+
T Consensus 255 ----------------~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g 300 (373)
T 2qm3_A 255 ----------------A----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKW-REIQKLLLNEFN 300 (373)
T ss_dssp ----------------H----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHH-HHHHHHHHHTSC
T ss_pred ----------------H----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHH-HHHHHHHHHhcC
Confidence 1 17889999999999995 5999997 333222 45667776 654
No 22
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.13 E-value=1.4e-05 Score=80.32 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=82.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+...++++++++.+++.+...|+.... ....||.|++++||.+.+...
T Consensus 136 v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~----------------------~~~~fD~Iv~npPy~~~~~~~ 193 (276)
T 2b3t_A 136 IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL----------------------AGQQFAMIVSNPPYIDEQDPH 193 (276)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG----------------------TTCCEEEEEECCCCBCTTCHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc----------------------ccCCccEEEECCCCCCccccc
Confidence 7899999999999999999999889999888875421 025699999999999875422
Q ss_pred cCcccccccCcch----hhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 82 KAPDIWRKWNVGL----GNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 82 K~pdiw~~w~~~~----~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
-.++++. +.|.. ...-.....++|..+.++|||||++++.++... ..-+..+|++++
T Consensus 194 l~~~v~~-~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~~~~~~l~~~G 254 (276)
T 2b3t_A 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQ----GEAVRQAFILAG 254 (276)
T ss_dssp HHSSGGG-SSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSC----HHHHHHHHHHTT
T ss_pred cChhhhh-cCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchH----HHHHHHHHHHCC
Confidence 2233321 12211 112224557899999999999999999876544 345677777764
No 23
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.08 E-value=1.6e-05 Score=81.61 Aligned_cols=101 Identities=23% Similarity=0.318 Sum_probs=77.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|+|+|+.-+..|++|+++.|+.+ +.+.+.|+..|+. ...||+|+++.|+++.
T Consensus 151 V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~----------------------~~~~D~Vi~~~p~~~~--- 205 (278)
T 3k6r_A 151 VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----------------------ENIADRILMGYVVRTH--- 205 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----------------------CSCEEEEEECCCSSGG---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc----------------------ccCCCEEEECCCCcHH---
Confidence 7999999999999999999999865 8999999988753 1569999999998752
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEE-eecC--CChhccHHHHHHHHHhCCCceEEee
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY-STCS--MNPVENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVY-STCS--lnP~ENEaVV~~~L~~~~~~~eLvd 150 (620)
..|..|+++||+||.|.| .++. ..+.+-.+.+..+.+..+-.++.+.
T Consensus 206 -----------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 206 -----------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp -----------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred -----------------------HHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEE
Confidence 235568899999999854 4432 3344445677788877765555544
No 24
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.07 E-value=2.4e-05 Score=75.63 Aligned_cols=122 Identities=17% Similarity=0.145 Sum_probs=78.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+...+.++++.+. ++.+...|+..+..+ ....||.|++++|+...+.-.
T Consensus 82 v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~--------------------~~~~fD~I~~npp~~~~~~~~ 140 (230)
T 3evz_A 82 VTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGV--------------------VEGTFDVIFSAPPYYDKPLGR 140 (230)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTT--------------------CCSCEEEEEECCCCC------
T ss_pred EEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhc--------------------ccCceeEEEECCCCcCCcccc
Confidence 78999999999999999999998 888998887654321 126799999999998776533
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELV 149 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLv 149 (620)
..... ..|... ...+ ..-.++|..+.++|||||++++.+++- + +...-+..+|++.+-.++.+
T Consensus 141 ~~~~~-~~~~~~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~-~-~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 141 VLTER-EAIGGG-KYGE-EFSVKLLEEAFDHLNPGGKVALYLPDK-E-KLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp ----------CC-SSSC-HHHHHHHHHHGGGEEEEEEEEEEEESC-H-HHHHHHHHHHHHTTCEEEEE
T ss_pred ccChh-hhhccC-ccch-HHHHHHHHHHHHHhCCCeEEEEEeccc-H-hHHHHHHHHHHHcCCceEEE
Confidence 22111 112111 1122 222689999999999999999976543 2 34445566677765434433
No 25
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.07 E-value=7.1e-06 Score=87.44 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=84.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC--cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|.|+++.-+...++|+++.|.. ++.+...|+..+... .......||.|++|+|+.+.+.
T Consensus 238 V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~-----------------~~~~~~~fD~Ii~DPP~~~~~~ 300 (385)
T 2b78_A 238 TTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKY-----------------ARRHHLTYDIIIIDPPSFARNK 300 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCCCC----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHH-----------------HHHhCCCccEEEECCCCCCCCh
Confidence 799999999999999999999987 899999988653110 0001247999999999975420
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC--hhccHHHHHHHHHhCCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN--PVENEAVVAEILRKCEG 144 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln--P~ENEaVV~~~L~~~~~ 144 (620)
...........+|+..++.+|+|||+|++|+|+-. +.+...+|..++.+.+.
T Consensus 301 -------------~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 354 (385)
T 2b78_A 301 -------------KEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKH 354 (385)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCC
T ss_pred -------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 11223455667899999999999999999999876 45667788888777653
No 26
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.95 E-value=3.2e-05 Score=76.96 Aligned_cols=116 Identities=14% Similarity=0.157 Sum_probs=73.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc-cc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD-GT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd-Gt 79 (620)
|+|.|+++..+...+.++++.+.. ++.+.+.|+..++.. .....||.|++|+|+... +.
T Consensus 75 v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~-------------------~~~~~fD~Ii~npPy~~~~~~ 135 (259)
T 3lpm_A 75 IVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL-------------------IPKERADIVTCNPPYFATPDT 135 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-------------------SCTTCEEEEEECCCC------
T ss_pred EEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-------------------hccCCccEEEECCCCCCCccc
Confidence 789999999999999999999986 699999999775421 112679999999999776 33
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
-.++++..+... . ......-..+|..+.++||+||++++.. +.+...-+..++++++
T Consensus 136 ~~~~~~~~~~~a--~-~~~~~~~~~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 136 SLKNTNEHFRIA--R-HEVMCTLEDTIRVAASLLKQGGKANFVH----RPERLLDIIDIMRKYR 192 (259)
T ss_dssp --------------------HHHHHHHHHHHHHEEEEEEEEEEE----CTTTHHHHHHHHHHTT
T ss_pred cCCCCchHHHhh--h-ccccCCHHHHHHHHHHHccCCcEEEEEE----cHHHHHHHHHHHHHCC
Confidence 344444322111 1 1111223578999999999999999943 3344444566677664
No 27
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.93 E-value=3.1e-05 Score=80.84 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=67.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|+|+++.-+..+++|++..+. .++.+.+.|+..+. ..||.|++|+|..+.
T Consensus 219 V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------------------------~~fD~Vi~dpP~~~~--- 271 (336)
T 2yx1_A 219 IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------------------------VKGNRVIMNLPKFAH--- 271 (336)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------------------------CCEEEEEECCTTTGG---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------------------------CCCcEEEECCcHhHH---
Confidence 79999999999999999999998 58999999886642 459999999997642
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.+|..++++|++||+|+|++|+-.
T Consensus 272 -----------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 272 -----------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -----------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -----------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 678889999999999999999998
No 28
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.90 E-value=1.1e-05 Score=78.06 Aligned_cols=85 Identities=12% Similarity=0.097 Sum_probs=67.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhC-----CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg-----~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+++..+...++++.+.+ ..++.+...|+...+. ....||.|+++.+|.
T Consensus 105 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~i~~~~~~~- 162 (226)
T 1i1n_A 105 VIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA---------------------EEAPYDAIHVGAAAP- 162 (226)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG---------------------GGCCEEEEEECSBBS-
T ss_pred EEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc---------------------cCCCcCEEEECCchH-
Confidence 7899999999999999999876 4688888888864321 125699999999981
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHH
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVV 135 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV 135 (620)
.++.++.++|||||+||+++|+..+.++..++
T Consensus 163 ---------------------------~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 194 (226)
T 1i1n_A 163 ---------------------------VVPQALIDQLKPGGRLILPVGPAGGNQMLEQY 194 (226)
T ss_dssp ---------------------------SCCHHHHHTEEEEEEEEEEESCTTSCEEEEEE
T ss_pred ---------------------------HHHHHHHHhcCCCcEEEEEEecCCCceEEEEE
Confidence 12346789999999999999998887775443
No 29
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.88 E-value=6.7e-05 Score=72.43 Aligned_cols=92 Identities=17% Similarity=0.158 Sum_probs=73.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+++..+...+.+++++|.+ ++.+...|+..... ....||.|+++...
T Consensus 80 v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~---------------------~~~~~D~v~~~~~~------ 132 (204)
T 3njr_A 80 AITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA---------------------DLPLPEAVFIGGGG------ 132 (204)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT---------------------TSCCCSEEEECSCC------
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc---------------------cCCCCCEEEECCcc------
Confidence 789999999999999999999998 99999998866211 01469999976511
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 144 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~ 144 (620)
. +. +|..+.++|||||++|+++|+. ++...+..+|++.+.
T Consensus 133 -------------------~-~~-~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 133 -------------------S-QA-LYDRLWEWLAPGTRIVANAVTL---ESETLLTQLHARHGG 172 (204)
T ss_dssp -------------------C-HH-HHHHHHHHSCTTCEEEEEECSH---HHHHHHHHHHHHHCS
T ss_pred -------------------c-HH-HHHHHHHhcCCCcEEEEEecCc---ccHHHHHHHHHhCCC
Confidence 0 23 8899999999999999999975 677777888888763
No 30
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.85 E-value=1.5e-05 Score=81.80 Aligned_cols=110 Identities=12% Similarity=-0.016 Sum_probs=79.0
Q ss_pred EEEEcCChhHHHHHHHHHHHh----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+..+...++++.++ +.+++.+...|+..+.. .....||.|++|+|+.+.
T Consensus 117 v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------------------~~~~~fD~Ii~d~~~~~~ 176 (296)
T 1inl_A 117 AILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR--------------------KFKNEFDVIIIDSTDPTA 176 (296)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG--------------------GCSSCEEEEEEEC-----
T ss_pred EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh--------------------hCCCCceEEEEcCCCccc
Confidence 789999999999999888653 35789999999865421 012569999999987533
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC--CChhccHHHHHHHHHhCCCceEEe
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELV 149 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS--lnP~ENEaVV~~~L~~~~~~~eLv 149 (620)
|.. .+-.+.+++..+.++|||||++|+.+|| +++.+...+++.+.+.++ .+.+.
T Consensus 177 ~~~-----------------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~ 232 (296)
T 1inl_A 177 GQG-----------------GHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFP-ITRVY 232 (296)
T ss_dssp ----------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCS-EEEEE
T ss_pred Cch-----------------hhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCC-ceEEE
Confidence 210 0113468899999999999999999999 678888999888877765 34443
No 31
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.80 E-value=2.5e-05 Score=79.77 Aligned_cols=107 Identities=11% Similarity=0.073 Sum_probs=78.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCc---cEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLF---DRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~F---DrILlDvPCSGd 77 (620)
|+|.|++..-+...+++++++|..+ +.+...|+.... ...| |.|++++||.+.
T Consensus 149 v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-----------------------~~~f~~~D~IvsnPPyi~~ 205 (284)
T 1nv8_A 149 VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-----------------------KEKFASIEMILSNPPYVKS 205 (284)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-----------------------GGGTTTCCEEEECCCCBCG
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-----------------------ccccCCCCEEEEcCCCCCc
Confidence 7899999999999999999999875 888888875410 0347 999999999999
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHH-hhcccCCEEEEeecCCChhccHHHHHH
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI-SLLKVGGRIVYSTCSMNPVENEAVVAE 137 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl-~lLk~GG~LVYSTCSlnP~ENEaVV~~ 137 (620)
+. ...+++. |.|..+..-..-...++.+.+ +.|++||.++. .+...+.++|.+.
T Consensus 206 ~~-~l~~~v~--~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~---e~~~~q~~~v~~~ 260 (284)
T 1nv8_A 206 SA-HLPKDVL--FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM---EIGEDQVEELKKI 260 (284)
T ss_dssp GG-SCTTSCC--CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE---ECCTTCHHHHTTT
T ss_pred cc-ccChhhc--cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE---EECchHHHHHHHH
Confidence 87 5556653 555432211111236888899 99999999996 4556666666543
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.79 E-value=0.00017 Score=68.57 Aligned_cols=101 Identities=19% Similarity=0.117 Sum_probs=78.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+...+.++++.+..++.+...|+..... ....||.|+++.+..
T Consensus 67 v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~~D~i~~~~~~~------ 119 (204)
T 3e05_A 67 IFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD---------------------DLPDPDRVFIGGSGG------ 119 (204)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT---------------------TSCCCSEEEESCCTT------
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh---------------------cCCCCCEEEECCCCc------
Confidence 78999999999999999999999999999988854321 014599999987542
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
....+|..+.++|||||++++++++. ++...+..+|++.+-.++++.+
T Consensus 120 -------------------~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~~ 167 (204)
T 3e05_A 120 -------------------MLEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDHGYMVEVACV 167 (204)
T ss_dssp -------------------CHHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHTTCEEEEEEE
T ss_pred -------------------CHHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHCCCceeEEEE
Confidence 12378999999999999999988875 4566677788887644444443
No 33
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.77 E-value=0.00018 Score=66.97 Aligned_cols=115 Identities=12% Similarity=0.043 Sum_probs=74.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+...+.++++.+..++.+...++..++.. ....||.|+++.+. +.
T Consensus 47 v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~--------------------~~~~fD~v~~~~~~-----~~ 101 (185)
T 3mti_A 47 VYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY--------------------VREPIRAAIFNLGY-----LP 101 (185)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT--------------------CCSCEEEEEEEEC--------
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh--------------------ccCCcCEEEEeCCC-----CC
Confidence 799999999999999999999998998888666554321 12569999887532 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC---hhccHHHHHHHHHhCC-CceEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN---PVENEAVVAEILRKCE-GSVELVD 150 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln---P~ENEaVV~~~L~~~~-~~~eLvd 150 (620)
. ...........+..+|..+.++|||||+++.+.++-+ ..|.+.+..+ +...+ ..++++.
T Consensus 102 ~--------~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~ 165 (185)
T 3mti_A 102 S--------ADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEY-VIGLDQRVFTAML 165 (185)
T ss_dssp ----------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHH-HHHSCTTTEEEEE
T ss_pred C--------cchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHH-HHhCCCceEEEEE
Confidence 0 1112233445667889999999999999988877654 3455665444 44432 2344443
No 34
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.71 E-value=0.00014 Score=68.38 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=73.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCC--cccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC--SGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC--SGdG 78 (620)
|+|.|+++..+...+.++++.|. .++.+.+.|+..++.. ....||.|++|.|- .+++
T Consensus 50 v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--------------------~~~~fD~v~~~~~~~~~~~~ 109 (197)
T 3eey_A 50 VFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY--------------------IDCPVKAVMFNLGYLPSGDH 109 (197)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT--------------------CCSCEEEEEEEESBCTTSCT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh--------------------ccCCceEEEEcCCcccCccc
Confidence 78999999999999999999997 7899999998776421 12579999999765 1111
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh---hccHHHHHHHHHh
Q 007036 79 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP---VENEAVVAEILRK 141 (620)
Q Consensus 79 tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP---~ENEaVV~~~L~~ 141 (620)
.+ ........++|..+.++||+||+++.++++-.+ .|.+ .+..++..
T Consensus 110 ~~---------------~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (197)
T 3eey_A 110 SI---------------STRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKE-KVLEFLKG 159 (197)
T ss_dssp TC---------------BCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHH-HHHHHHTT
T ss_pred cc---------------ccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHH-HHHHHHHh
Confidence 11 111224466999999999999999988755433 3333 34444544
No 35
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.71 E-value=8e-05 Score=77.56 Aligned_cols=113 Identities=14% Similarity=0.139 Sum_probs=80.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+.+.+.++...|. ++.+.+.|+.... ....||.|++++|.+ .+.
T Consensus 162 v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~----------------------~~~~fD~Ii~NPPfg---~~~ 215 (344)
T 2f8l_A 162 ASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL----------------------LVDPVDVVISDLPVG---YYP 215 (344)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC----------------------CCCCEEEEEEECCCS---EES
T ss_pred EEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc----------------------ccCCccEEEECCCCC---CcC
Confidence 78999999999999999988887 6778888774421 015699999999984 332
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec-CCChhccHHHHHHHHHh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC-SMNPVENEAVVAEILRK 141 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC-SlnP~ENEaVV~~~L~~ 141 (620)
..+.+.+|.+....++...+..+|.+++++||+||++++.++ ++..-..+.-+...|.+
T Consensus 216 -~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~ 275 (344)
T 2f8l_A 216 -DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKK 275 (344)
T ss_dssp -CHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHH
T ss_pred -chhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHh
Confidence 344455665544445667888999999999999999999873 33222333444444444
No 36
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.65 E-value=3.3e-05 Score=81.61 Aligned_cols=91 Identities=15% Similarity=0.222 Sum_probs=62.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.-+...++|+++.|..|+.+...|+..+... +...... .. ..........||.|++|+|.+|
T Consensus 238 V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~-~~~~~~~---~~-l~~~~~~~~~fD~Vv~dPPr~g----- 307 (369)
T 3bt7_A 238 VLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQA-MNGVREF---NR-LQGIDLKSYQCETIFVDPPRSG----- 307 (369)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHH-HSSCCCC---TT-GGGSCGGGCCEEEEEECCCTTC-----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHH-Hhhcccc---cc-ccccccccCCCCEEEECcCccc-----
Confidence 799999999999999999999999999999988654210 0000000 00 0000000136999999999885
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
+...++++|++||+|||.+|+
T Consensus 308 -----------------------~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 308 -----------------------LDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp -----------------------CCHHHHHHHTTSSEEEEEESC
T ss_pred -----------------------cHHHHHHHHhCCCEEEEEECC
Confidence 123456677799999999996
No 37
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.57 E-value=0.00018 Score=71.38 Aligned_cols=82 Identities=9% Similarity=0.068 Sum_probs=64.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...+.++++.|.. ++.+...|+..+ +.+ .....||.|++|+++..-
T Consensus 91 v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~-------------------~~~~~fD~V~~d~~~~~~-- 149 (248)
T 3tfw_A 91 LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL-------------------GECPAFDLIFIDADKPNN-- 149 (248)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC-------------------CSCCCCSEEEECSCGGGH--
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc-------------------CCCCCeEEEEECCchHHH--
Confidence 789999999999999999999986 799999988653 211 011479999999853221
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
...|..+.++|||||+||+..+...
T Consensus 150 -----------------------~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 150 -----------------------PHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp -----------------------HHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred -----------------------HHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 2468889999999999999888765
No 38
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.54 E-value=0.00025 Score=67.25 Aligned_cols=92 Identities=17% Similarity=0.246 Sum_probs=70.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+..+.+++++.+. ++.+...|+..+| ..||.|++|+|+.-. +
T Consensus 75 v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------------------------~~~D~v~~~~p~~~~---~ 126 (207)
T 1wy7_A 75 VICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN------------------------SRVDIVIMNPPFGSQ---R 126 (207)
T ss_dssp EEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC------------------------CCCSEEEECCCCSSS---S
T ss_pred EEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC------------------------CCCCEEEEcCCCccc---c
Confidence 79999999999999999998887 8888888886653 359999999996421 1
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
+ .....+|.++++++ | .+|+.|. .+.++.+.+..+|.+.+
T Consensus 127 ~-----------------~~~~~~l~~~~~~l--~--~~~~~~~-~~~~~~~~~~~~l~~~g 166 (207)
T 1wy7_A 127 K-----------------HADRPFLLKAFEIS--D--VVYSIHL-AKPEVRRFIEKFSWEHG 166 (207)
T ss_dssp T-----------------TTTHHHHHHHHHHC--S--EEEEEEE-CCHHHHHHHHHHHHHTT
T ss_pred C-----------------CchHHHHHHHHHhc--C--cEEEEEe-CCcCCHHHHHHHHHHCC
Confidence 1 11245678888887 4 3889994 44567778888888875
No 39
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.53 E-value=0.00019 Score=69.90 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=50.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+++..+....+++++.+. .++.+.+.|+..++. ...||.|++|+||++.+..
T Consensus 103 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------------------~~~~D~v~~~~~~~~~~~~ 160 (241)
T 3gdh_A 103 VIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS----------------------FLKADVVFLSPPWGGPDYA 160 (241)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----------------------GCCCSEEEECCCCSSGGGG
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----------------------cCCCCEEEECCCcCCcchh
Confidence 78999999999999999999998 689999999876531 2579999999999998765
Q ss_pred cc
Q 007036 81 RK 82 (620)
Q Consensus 81 rK 82 (620)
..
T Consensus 161 ~~ 162 (241)
T 3gdh_A 161 TA 162 (241)
T ss_dssp GS
T ss_pred hh
Confidence 53
No 40
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.52 E-value=0.00018 Score=70.00 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=65.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++.++...+.++++.|.. ++.+...|+..+ +.. .....||.|++|++|+
T Consensus 81 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-------------------~~~~~fD~I~~~~~~~---- 137 (233)
T 2gpy_A 81 IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKL-------------------ELYPLFDVLFIDAAKG---- 137 (233)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHH-------------------TTSCCEEEEEEEGGGS----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhc-------------------ccCCCccEEEECCCHH----
Confidence 789999999999999999999985 688888888653 110 0025699999998874
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.+..+|..+.++|+|||+||++++..
T Consensus 138 ---------------------~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 138 ---------------------QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp ---------------------CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred ---------------------HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 24678899999999999999997654
No 41
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.48 E-value=0.00037 Score=63.95 Aligned_cols=99 Identities=13% Similarity=0.209 Sum_probs=72.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...+.++++.+.+ ++ +...|+.. ++. ....||.|++..+..
T Consensus 52 v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~---------------------~~~~~D~i~~~~~~~---- 105 (178)
T 3hm2_A 52 AVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD---------------------VPDNPDVIFIGGGLT---- 105 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG---------------------CCSCCSEEEECC-TT----
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc---------------------cCCCCCEEEECCccc----
Confidence 789999999999999999999987 88 77677632 110 115699999754321
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
+ ..+|..+.++|||||++++++++. ++...+..++++++..+.-+.+
T Consensus 106 ----------~------------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 106 ----------A------------PGVFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp ----------C------------TTHHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHHCCEEEEEEE
T ss_pred ----------H------------HHHHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHcCCeeEEEEe
Confidence 0 568888999999999999998876 4556677778777654444333
No 42
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.47 E-value=0.00014 Score=73.03 Aligned_cols=96 Identities=13% Similarity=0.200 Sum_probs=71.1
Q ss_pred EEEEcCChhHHHHHHHHHHHh-CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...++++++. |..++.+...|+.... ....||.|++|+|
T Consensus 138 v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~----------------------~~~~fD~Vi~~~~------- 188 (275)
T 1yb2_A 138 LTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI----------------------SDQMYDAVIADIP------- 188 (275)
T ss_dssp EEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC----------------------CSCCEEEEEECCS-------
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC----------------------cCCCccEEEEcCc-------
Confidence 789999999999999999998 8889999988886521 0156999999866
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
+. .++|.++.++|||||++++++|+.... .-+...|++.+ +..+.+
T Consensus 189 ----~~----------------~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~l~~~G--f~~~~~ 234 (275)
T 1yb2_A 189 ----DP----------------WNHVQKIASMMKPGSVATFYLPNFDQS---EKTVLSLSASG--MHHLET 234 (275)
T ss_dssp ----CG----------------GGSHHHHHHTEEEEEEEEEEESSHHHH---HHHHHHSGGGT--EEEEEE
T ss_pred ----CH----------------HHHHHHHHHHcCCCCEEEEEeCCHHHH---HHHHHHHHHCC--CeEEEE
Confidence 11 167888999999999999999976432 22334444432 444443
No 43
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.45 E-value=0.00026 Score=68.47 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=73.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|.|+++..+...++++++.|.. ++.+...|+..+ +.+. . ......||.|++|+.+..
T Consensus 86 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~--~--------------~~~~~~fD~V~~d~~~~~--- 146 (221)
T 3u81_A 86 LLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLK--K--------------KYDVDTLDMVFLDHWKDR--- 146 (221)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTT--T--------------TSCCCCCSEEEECSCGGG---
T ss_pred EEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHH--H--------------hcCCCceEEEEEcCCccc---
Confidence 789999999999999999999986 599999998553 2110 0 001257999999965322
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..-..+++... ++|||||+||+.+|.... .....+.++.++ .++...+
T Consensus 147 -------------------~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~---~~~~~~~l~~~~-~~~~~~~ 194 (221)
T 3u81_A 147 -------------------YLPDTLLLEKC-GLLRKGTVLLADNVIVPG---TPDFLAYVRGSS-SFECTHY 194 (221)
T ss_dssp -------------------HHHHHHHHHHT-TCCCTTCEEEESCCCCCC---CHHHHHHHHHCT-TEEEEEE
T ss_pred -------------------chHHHHHHHhc-cccCCCeEEEEeCCCCcc---hHHHHHHHhhCC-CceEEEc
Confidence 11123556665 999999999999998643 233455566665 3554443
No 44
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.41 E-value=0.00068 Score=62.37 Aligned_cols=99 Identities=19% Similarity=0.135 Sum_probs=72.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+....+++++.+. .++.+.+.|+.. ++. ...||.|+++.+..
T Consensus 58 v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----------------------~~~~D~v~~~~~~~---- 111 (192)
T 1l3i_A 58 VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK----------------------IPDIDIAVVGGSGG---- 111 (192)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT----------------------SCCEEEEEESCCTT----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc----------------------CCCCCEEEECCchH----
Confidence 78999999999999999999988 788888887754 111 13699999875530
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEee
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd 150 (620)
+ ...+|..+.++|++||++++++|+. ++..-+..+|++.+-.++.+.
T Consensus 112 -----~----------------~~~~l~~~~~~l~~gG~l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~ 158 (192)
T 1l3i_A 112 -----E----------------LQEILRIIKDKLKPGGRIIVTAILL---ETKFEAMECLRDLGFDVNITE 158 (192)
T ss_dssp -----C----------------HHHHHHHHHHTEEEEEEEEEEECBH---HHHHHHHHHHHHTTCCCEEEE
T ss_pred -----H----------------HHHHHHHHHHhcCCCcEEEEEecCc---chHHHHHHHHHHCCCceEEEE
Confidence 0 1578999999999999999999863 333445566676653444444
No 45
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.40 E-value=0.00032 Score=70.86 Aligned_cols=77 Identities=18% Similarity=0.134 Sum_probs=61.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|+++.-+..+++++++.+..|+.+.+.|+..++. ...||.|++|+|.
T Consensus 146 V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~----------------------~~~~D~Vi~d~p~------- 196 (272)
T 3a27_A 146 VYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL----------------------KDVADRVIMGYVH------- 196 (272)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC----------------------TTCEEEEEECCCS-------
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc----------------------cCCceEEEECCcc-------
Confidence 79999999999999999999999999999999977621 1569999999985
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
+ ..++|..++++|+|||+++. +|...
T Consensus 197 ---~----------------~~~~l~~~~~~LkpgG~l~~-s~~~~ 222 (272)
T 3a27_A 197 ---K----------------THKFLDKTFEFLKDRGVIHY-HETVA 222 (272)
T ss_dssp ---S----------------GGGGHHHHHHHEEEEEEEEE-EEEEE
T ss_pred ---c----------------HHHHHHHHHHHcCCCCEEEE-EEcCc
Confidence 0 02467788999999887764 55544
No 46
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.37 E-value=0.00027 Score=67.74 Aligned_cols=84 Identities=21% Similarity=0.069 Sum_probs=63.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC--CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCC-ccEEEEcCCCcccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT--ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLL-FDRVLCDVPCSGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~--~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-FDrILlDvPCSGdG 78 (620)
|+|.|+++.-+...+.++++.+. .++.+.+.|+..+... ..... ||.|++|+|.. .+
T Consensus 79 v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~-------------------~~~~~~fD~I~~~~~~~-~~ 138 (201)
T 2ift_A 79 VTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ-------------------PQNQPHFDVVFLDPPFH-FN 138 (201)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS-------------------CCSSCCEEEEEECCCSS-SC
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh-------------------hccCCCCCEEEECCCCC-Cc
Confidence 79999999999999999999998 7999999988664310 01256 99999999942 11
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHH--HhhcccCCEEEEeecCCC
Q 007036 79 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 79 tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rA--l~lLk~GG~LVYSTCSln 127 (620)
+ ...+|... .++|||||++++++|+..
T Consensus 139 ------~----------------~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 139 ------L----------------AEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ------H----------------HHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ------c----------------HHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 0 02334444 568999999999999876
No 47
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.35 E-value=0.00049 Score=67.49 Aligned_cols=97 Identities=16% Similarity=0.074 Sum_probs=72.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++...+..+.++++++|.+|+.+.+.|+..++.. . .....||.|++++.
T Consensus 97 v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~---------------~~~~~fD~V~~~~~-------- 150 (240)
T 1xdz_A 97 VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR---K---------------DVRESYDIVTARAV-------- 150 (240)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC---T---------------TTTTCEEEEEEECC--------
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc---c---------------cccCCccEEEEecc--------
Confidence 789999999999999999999998999999988765420 0 00257999998541
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
.+ ...+|..+.++|||||++++..+....+|-+.+. ..++.++
T Consensus 151 -----------~~-------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~-~~l~~~g 193 (240)
T 1xdz_A 151 -----------AR-------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGK-KAITTLG 193 (240)
T ss_dssp -----------SC-------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHH-HHHHHTT
T ss_pred -----------CC-------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHH-HHHHHcC
Confidence 00 3578899999999999999998887666554443 4566664
No 48
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.34 E-value=0.00061 Score=64.60 Aligned_cols=97 Identities=10% Similarity=0.100 Sum_probs=74.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++...+...+.++.+.+..++.+...|+..++ ...||.|+++.+.
T Consensus 86 v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----------------------~~~fD~i~~~~~~------- 135 (205)
T 3grz_A 86 VLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-----------------------DGKFDLIVANILA------- 135 (205)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-----------------------CSCEEEEEEESCH-------
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-----------------------CCCceEEEECCcH-------
Confidence 7899999999999999999999888888888875542 1569999998642
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
....++|..+.++||+||+++.++.... ....+..++++.+ ++++.+
T Consensus 136 ------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~G--f~~~~~ 182 (205)
T 3grz_A 136 ------------------EILLDLIPQLDSHLNEDGQVIFSGIDYL---QLPKIEQALAENS--FQIDLK 182 (205)
T ss_dssp ------------------HHHHHHGGGSGGGEEEEEEEEEEEEEGG---GHHHHHHHHHHTT--EEEEEE
T ss_pred ------------------HHHHHHHHHHHHhcCCCCEEEEEecCcc---cHHHHHHHHHHcC--CceEEe
Confidence 1126788999999999999999766543 3455667777764 565554
No 49
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.34 E-value=0.00047 Score=64.77 Aligned_cols=86 Identities=13% Similarity=0.056 Sum_probs=66.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.-+...++++++.+..++.+.+.|+..++.. .....||.|++|+|....
T Consensus 70 v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-------------------~~~~~fD~i~~~~p~~~~---- 126 (189)
T 3p9n_A 70 VLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA-------------------GTTSPVDLVLADPPYNVD---- 126 (189)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH-------------------CCSSCCSEEEECCCTTSC----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh-------------------ccCCCccEEEECCCCCcc----
Confidence 799999999999999999999998999999998765310 012679999999884321
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHh--hcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGIS--LLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~--lLk~GG~LVYSTCSln 127 (620)
.....++|....+ +|||||+++..+.+-.
T Consensus 127 -----------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 127 -----------------SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp -----------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred -----------------hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 0233566777777 9999999999887644
No 50
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.33 E-value=0.00043 Score=68.22 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=64.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...++++++.|.. ++.+...|+..+ +.+. . .......||.|++|++|+
T Consensus 98 v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~--~-------------~~~~~~~fD~I~~d~~~~---- 158 (237)
T 3c3y_A 98 ITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLL--Q-------------GQESEGSYDFGFVDADKP---- 158 (237)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH--H-------------STTCTTCEEEEEECSCGG----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH--h-------------ccCCCCCcCEEEECCchH----
Confidence 789999999999999999999986 588888888653 1100 0 000025799999997643
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
....+|..++++|+|||+||+.+|-..
T Consensus 159 ---------------------~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 159 ---------------------NYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp ---------------------GHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred ---------------------HHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 125678899999999999999988543
No 51
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.31 E-value=0.00043 Score=66.52 Aligned_cols=85 Identities=13% Similarity=0.049 Sum_probs=63.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...++++++.|..+ +.+...|+..+... + .......||.|++|++|+
T Consensus 86 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~---------------~~~~~~~fD~v~~d~~~~----- 144 (223)
T 3duw_A 86 VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQ-I---------------ENEKYEPFDFIFIDADKQ----- 144 (223)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH-H---------------HHTTCCCCSEEEECSCGG-----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH-H---------------HhcCCCCcCEEEEcCCcH-----
Confidence 7899999999999999999999875 99998888543110 0 000014699999998754
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
....+|..+.++|||||+||...+...
T Consensus 145 --------------------~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 145 --------------------NNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp --------------------GHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred --------------------HHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 113678899999999999998766554
No 52
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.29 E-value=0.00087 Score=67.09 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=71.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+.....++++.+. .++.+...|+..+ + ....||.|++|+|+.
T Consensus 140 v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~--------------------~~~~~D~V~~~~~~~----- 192 (277)
T 1o54_A 140 VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--F--------------------DEKDVDALFLDVPDP----- 192 (277)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--C--------------------SCCSEEEEEECCSCG-----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--c--------------------cCCccCEEEECCcCH-----
Confidence 78999999999999999999997 6888888887653 1 014699999998742
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..+|..+.++|++||++++.+++.... +.+ ...|++.+ +..+.+
T Consensus 193 ----------------------~~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~-~~~l~~~g--f~~~~~ 236 (277)
T 1o54_A 193 ----------------------WNYIDKCWEALKGGGRFATVCPTTNQV--QET-LKKLQELP--FIRIEV 236 (277)
T ss_dssp ----------------------GGTHHHHHHHEEEEEEEEEEESSHHHH--HHH-HHHHHHSS--EEEEEE
T ss_pred ----------------------HHHHHHHHHHcCCCCEEEEEeCCHHHH--HHH-HHHHHHCC--CceeEE
Confidence 256788899999999999999875332 233 34455543 444444
No 53
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.26 E-value=0.001 Score=65.07 Aligned_cols=80 Identities=10% Similarity=0.046 Sum_probs=63.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...+.++++.+.. ++.+...|+..+..- .....||.|++|+++..
T Consensus 98 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-------------------~~~~~fD~V~~~~~~~~---- 154 (232)
T 3ntv_A 98 VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFEN-------------------VNDKVYDMIFIDAAKAQ---- 154 (232)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHH-------------------HTTSCEEEEEEETTSSS----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh-------------------hccCCccEEEEcCcHHH----
Confidence 789999999999999999999985 899999988653210 00257999999965433
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
...+|..+.++|||||+||+..+-
T Consensus 155 ---------------------~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 155 ---------------------SKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ---------------------HHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ---------------------HHHHHHHHHHhcCCCeEEEEeeCC
Confidence 355889999999999999994443
No 54
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.25 E-value=0.0023 Score=58.83 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=66.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc--EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n--v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+....+++...+..+ +.+...|+..... ...||.|+++.|-..
T Consensus 77 v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----------------------~~~~D~v~~~~~~~~--- 131 (194)
T 1dus_A 77 TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----------------------DRKYNKIITNPPIRA--- 131 (194)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT----------------------TSCEEEEEECCCSTT---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc----------------------cCCceEEEECCCccc---
Confidence 7899999999999999999999887 9999888765321 256999999866321
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
-......+|..+.++|++||+++.++++-..
T Consensus 132 ------------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 132 ------------------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp ------------------CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred ------------------chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 0123467899999999999999999987643
No 55
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.25 E-value=0.00059 Score=65.42 Aligned_cols=84 Identities=18% Similarity=0.090 Sum_probs=61.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.-+...++++++.+..++.+.+.|+..+... ....||.|++|+|.. .+
T Consensus 80 V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~--------------------~~~~fD~V~~~~p~~-~~--- 135 (202)
T 2fpo_A 80 ATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ--------------------KGTPHNIVFVDPPFR-RG--- 135 (202)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS--------------------CCCCEEEEEECCSSS-TT---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh--------------------cCCCCCEEEECCCCC-CC---
Confidence 799999999999999999999988999999988653110 125699999999932 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHH--HhhcccCCEEEEeecCCCh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rA--l~lLk~GG~LVYSTCSlnP 128 (620)
. ...+|... .++|+|||++++++|+...
T Consensus 136 ----~---------------~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 136 ----L---------------LEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp ----T---------------HHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred ----c---------------HHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 0 01223333 4569999999999997543
No 56
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.23 E-value=9.1e-05 Score=69.74 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=52.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++.+.+. ++.+...|+.. +. .. .......||.|++|+|+...+.+.
T Consensus 57 v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~-~~---~~-------------~~~~~~~fD~i~~npp~~~~~~~~ 118 (215)
T 4dzr_A 57 VTAVDLSMDALAVARRNAERFGA-VVDWAAADGIE-WL---IE-------------RAERGRPWHAIVSNPPYIPTGEID 118 (215)
T ss_dssp EEEEECC--------------------CCHHHHHH-HH---HH-------------HHHTTCCBSEEEECCCCCC-----
T ss_pred EEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHh-hh---hh-------------hhhccCcccEEEECCCCCCCcccc
Confidence 78999999999999999988887 77777777755 10 00 000126799999999998777665
Q ss_pred cCcccccccCcch----hhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHH
Q 007036 82 KAPDIWRKWNVGL----GNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILR 140 (620)
Q Consensus 82 K~pdiw~~w~~~~----~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~ 140 (620)
.-+.-.+.+.+.. ...-.....++|.++.++|||||++++.++.. ....-+..++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~ 178 (215)
T 4dzr_A 119 QLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH---NQADEVARLFA 178 (215)
T ss_dssp -------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---SCHHHHHHHTG
T ss_pred ccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---ccHHHHHHHHH
Confidence 4332212222211 11112233678999999999999966656553 33444566666
No 57
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.23 E-value=0.0011 Score=64.95 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=67.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...+.++++.|.++ +.+...|+...- ....||.|++|+|+.
T Consensus 121 v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------------~~~~~D~v~~~~~~~----- 173 (255)
T 3mb5_A 121 VVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI----------------------EEENVDHVILDLPQP----- 173 (255)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC----------------------CCCSEEEEEECSSCG-----
T ss_pred EEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc----------------------CCCCcCEEEECCCCH-----
Confidence 7899999999999999999999887 999998886421 115699999988732
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
..+|.++.++|+|||+++..+-+. +...-+...|++++
T Consensus 174 ----------------------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 174 ----------------------ERVVEHAAKALKPGGFFVAYTPCS---NQVMRLHEKLREFK 211 (255)
T ss_dssp ----------------------GGGHHHHHHHEEEEEEEEEEESSH---HHHHHHHHHHHHTG
T ss_pred ----------------------HHHHHHHHHHcCCCCEEEEEECCH---HHHHHHHHHHHHcC
Confidence 246888999999999988543222 23334455666654
No 58
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.20 E-value=0.0015 Score=62.61 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=66.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++...+.....++++.+.+|+.+...|+..++.. .....||.|++..|
T Consensus 68 v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-------------------~~~~~~D~i~~~~~-------- 120 (214)
T 1yzh_A 68 YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY-------------------FEDGEIDRLYLNFS-------- 120 (214)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT-------------------SCTTCCSEEEEESC--------
T ss_pred EEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh-------------------cCCCCCCEEEEECC--------
Confidence 789999999999999999999999999999999775421 01256999999865
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
+-|.+ ....... ..+..+|..+.++|||||+++.+|-
T Consensus 121 ---~~~~~-~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 121 ---DPWPK-KRHEKRR--LTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ---CCCCS-GGGGGGS--TTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ---CCccc-cchhhhc--cCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 11211 0000011 1367899999999999999998763
No 59
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.18 E-value=0.00064 Score=67.94 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=72.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++.+++..+.++++++|..|+.+.+.|+..++... .....||.|++.+-
T Consensus 107 v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~------------------~~~~~fD~I~s~a~-------- 160 (249)
T 3g89_A 107 LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA------------------GHREAYARAVARAV-------- 160 (249)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST------------------TTTTCEEEEEEESS--------
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc------------------ccCCCceEEEECCc--------
Confidence 7899999999999999999999999999999987765210 01257999998431
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
. .+ ..++..+..+|||||++++..+....+|-+++ ..++++.+
T Consensus 161 ------~--------~~----~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~-~~~l~~~G 203 (249)
T 3g89_A 161 ------A--------PL----CVLSELLLPFLEVGGAAVAMKGPRVEEELAPL-PPALERLG 203 (249)
T ss_dssp ------C--------CH----HHHHHHHGGGEEEEEEEEEEECSCCHHHHTTH-HHHHHHHT
T ss_pred ------C--------CH----HHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHH-HHHHHHcC
Confidence 0 11 36888899999999999998887655554444 44556655
No 60
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.10 E-value=0.0016 Score=63.50 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=62.5
Q ss_pred EEEEcCChhHHHHHHHHHHHh-CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|.++..+..++.++++. |..++.+...|+..++- ....||.|++|.|+.
T Consensus 124 v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~---------------------~~~~~D~v~~~~~~~----- 177 (258)
T 2pwy_A 124 VESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL---------------------EEAAYDGVALDLMEP----- 177 (258)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC---------------------CTTCEEEEEEESSCG-----
T ss_pred EEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC---------------------CCCCcCEEEECCcCH-----
Confidence 789999999999999999998 88889999988876531 114699999986621
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
..+|.++.++|++||+++.++.+.
T Consensus 178 ----------------------~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 178 ----------------------WKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp ----------------------GGGHHHHHHHEEEEEEEEEEESCH
T ss_pred ----------------------HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 267888999999999999887654
No 61
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.09 E-value=0.0024 Score=62.79 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=71.9
Q ss_pred EEEEcCChhHHHHHHHHHHHh--------CCCcEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcC
Q 007036 2 VIANDLDVQRCNLLIHQTKRM--------CTANLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDV 72 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl--------g~~nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDv 72 (620)
|+|.|++...+..+..+++.+ +..|+.+...|+..+ +.. .....||.|++..
T Consensus 76 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~-------------------~~~~~~d~v~~~~ 136 (246)
T 2vdv_E 76 ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF-------------------FEKGQLSKMFFCF 136 (246)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT-------------------SCTTCEEEEEEES
T ss_pred EEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh-------------------ccccccCEEEEEC
Confidence 799999999999999999887 888999999998762 211 1125689998765
Q ss_pred CCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEE
Q 007036 73 PCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVEL 148 (620)
Q Consensus 73 PCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eL 148 (620)
|.. |.+-. .....+ +|..+|..+.++|++||+|+.+|-. .+-...+...+..++. ++.
T Consensus 137 p~p-----------~~k~~-~~~~r~--~~~~~l~~~~~~LkpgG~l~~~td~---~~~~~~~~~~~~~~~~-~~~ 194 (246)
T 2vdv_E 137 PDP-----------HFKQR-KHKARI--ITNTLLSEYAYVLKEGGVVYTITDV---KDLHEWMVKHLEEHPL-FER 194 (246)
T ss_dssp CCC-----------C-------CSSC--CCHHHHHHHHHHEEEEEEEEEEESC---HHHHHHHHHHHHHSTT-EEE
T ss_pred CCc-----------ccccc-hhHHhh--ccHHHHHHHHHHcCCCCEEEEEecc---HHHHHHHHHHHHhCcC-eEe
Confidence 532 21100 001111 2578999999999999999996632 2333344445555543 443
No 62
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.07 E-value=0.0047 Score=58.67 Aligned_cols=105 Identities=14% Similarity=0.083 Sum_probs=78.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++...+.....++...+.+++.+...|+..++. ....||.|++... +.
T Consensus 65 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~ 117 (219)
T 3dh0_A 65 VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL---------------------PDNTVDFIFMAFT------FH 117 (219)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS---------------------CSSCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC---------------------CCCCeeEEEeehh------hh
Confidence 78999999999999999999998899999999877641 1257999997521 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh---------ccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV---------ENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~---------ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
.+ + + ...+|..+.++|||||+++.+++..... -+..-+..+|++.+ ++++.+
T Consensus 118 -------~~-~-~-------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 178 (219)
T 3dh0_A 118 -------EL-S-E-------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAG--IRVGRV 178 (219)
T ss_dssp -------GC-S-S-------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTT--CEEEEE
T ss_pred -------hc-C-C-------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCC--CEEEEE
Confidence 11 0 1 2678999999999999999998765432 23566778888875 555554
No 63
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.07 E-value=0.00065 Score=64.88 Aligned_cols=79 Identities=10% Similarity=0.006 Sum_probs=61.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...++++++.+.. ++.+...|+..+ +. ... ||.|++|+++.
T Consensus 84 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---------------------~~~-fD~v~~~~~~~---- 137 (210)
T 3c3p_A 84 VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG---------------------QRD-IDILFMDCDVF---- 137 (210)
T ss_dssp EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT---------------------CCS-EEEEEEETTTS----
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc---------------------CCC-CCEEEEcCChh----
Confidence 789999999999999999998875 588888888543 21 015 99999995431
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.+..+|..+.++|||||+||+.++-..
T Consensus 138 ---------------------~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 138 ---------------------NGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp ---------------------CHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred ---------------------hhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 125678899999999999999877553
No 64
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.06 E-value=0.002 Score=62.23 Aligned_cols=90 Identities=17% Similarity=0.104 Sum_probs=66.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++...+.....++++.+.+|+.+...|+..++.. + ....||.|++..|+
T Consensus 65 v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~-~------------------~~~~~d~v~~~~~~------- 118 (213)
T 2fca_A 65 YIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDV-F------------------EPGEVKRVYLNFSD------- 118 (213)
T ss_dssp EEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHH-C------------------CTTSCCEEEEESCC-------
T ss_pred EEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh-c------------------CcCCcCEEEEECCC-------
Confidence 789999999999999999999999999999999775321 0 12469999986543
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
-|.+. ......+ .|..+|..+.++|||||+++.+|-
T Consensus 119 ----p~~~~-~~~~~rl--~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 119 ----PWPKK-RHEKRRL--TYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ----CCCSG-GGGGGST--TSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ----CCcCc-ccccccc--CcHHHHHHHHHHcCCCCEEEEEeC
Confidence 12210 0011111 267899999999999999999873
No 65
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.06 E-value=0.00095 Score=65.42 Aligned_cols=81 Identities=10% Similarity=0.071 Sum_probs=63.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC--cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...+.++++.|.. ++.+...|+..+.. ......||.|++|++...
T Consensus 84 v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~-------------------~~~~~~fD~V~~d~~~~~--- 141 (221)
T 3dr5_A 84 LTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS-------------------RLANDSYQLVFGQVSPMD--- 141 (221)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG-------------------GSCTTCEEEEEECCCTTT---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH-------------------HhcCCCcCeEEEcCcHHH---
Confidence 789999999999999999999986 79999998865421 001257999999964210
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
....+..++++|||||+||...+..
T Consensus 142 ----------------------~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 142 ----------------------LKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp ----------------------HHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred ----------------------HHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 1346888999999999999988765
No 66
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.98 E-value=0.00092 Score=64.04 Aligned_cols=104 Identities=14% Similarity=0.094 Sum_probs=65.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccc-cccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESN-MGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~-~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|+|+++.. ..+++.+...|+...+... .. ..... .....||.|++|+++...|..
T Consensus 50 V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~---~~--------~~~~~~~~~~~~D~Vlsd~~~~~~g~~ 107 (191)
T 3dou_A 50 IISIDLQEME-----------EIAGVRFIRCDIFKETIFD---DI--------DRALREEGIEKVDDVVSDAMAKVSGIP 107 (191)
T ss_dssp EEEEESSCCC-----------CCTTCEEEECCTTSSSHHH---HH--------HHHHHHHTCSSEEEEEECCCCCCCSCH
T ss_pred EEEEeccccc-----------cCCCeEEEEccccCHHHHH---HH--------HHHhhcccCCcceEEecCCCcCCCCCc
Confidence 7889988742 3467888888876643110 00 00000 000379999999988777642
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
.. +......++..+|..|.++|||||++|..+ ..-++...+.++|++
T Consensus 108 ----------~~-d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~---~~~~~~~~~~~~l~~ 154 (191)
T 3dou_A 108 ----------SR-DHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ---FQGDMTNDFIAIWRK 154 (191)
T ss_dssp ----------HH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEE---ECSTHHHHHHHHHGG
T ss_pred ----------cc-CHHHHHHHHHHHHHHHHHHccCCCEEEEEE---cCCCCHHHHHHHHHH
Confidence 11 222345678899999999999999998444 445555556666655
No 67
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.89 E-value=0.0072 Score=61.41 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=65.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|++...+.....++++.|.. ++.+...|+..+|. ....||.|++- +++
T Consensus 143 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~V~~~------~~l 195 (312)
T 3vc1_A 143 VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF---------------------DKGAVTASWNN------EST 195 (312)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---------------------CTTCEEEEEEE------SCG
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC---------------------CCCCEeEEEEC------Cch
Confidence 789999999999999999999976 79999999877651 12579999962 111
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
. .+. +..+|..+.++|||||+++++|.....
T Consensus 196 ~-------~~~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 196 M-------YVD----------LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp G-------GSC----------HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred h-------hCC----------HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 1 110 678999999999999999999865544
No 68
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.85 E-value=0.0035 Score=60.75 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=65.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+..+.+..++. .|+.....|+...... ......||.|++|++
T Consensus 84 V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~------------------~~~~~~fD~V~~~~~-------- 135 (210)
T 1nt2_A 84 IYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKY------------------SGIVEKVDLIYQDIA-------- 135 (210)
T ss_dssp EEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGT------------------TTTCCCEEEEEECCC--------
T ss_pred EEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhh------------------cccccceeEEEEecc--------
Confidence 799999999988777777654 5787777777653110 001157999999831
Q ss_pred cCcccccccCcchhhhhHHHHHH-HHHHHHhhcccCCEEEEee---cCCChhccHHHHHHH---HHhCCCceEEeeCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQ-IAMRGISLLKVGGRIVYST---CSMNPVENEAVVAEI---LRKCEGSVELVDVS 152 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~-IL~rAl~lLk~GG~LVYST---CSlnP~ENEaVV~~~---L~~~~~~~eLvd~~ 152 (620)
++ .|.+ +|.++.++|||||+++++. |.-.....+++.... |++. ++++...
T Consensus 136 -~~----------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~---f~~~~~~ 193 (210)
T 1nt2_A 136 -QK----------------NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD---FKIVKHG 193 (210)
T ss_dssp -ST----------------THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT---SEEEEEE
T ss_pred -Ch----------------hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh---cEEeeee
Confidence 11 1333 4888999999999999984 322333345554222 5553 5655543
No 69
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.84 E-value=0.0017 Score=63.40 Aligned_cols=91 Identities=19% Similarity=0.125 Sum_probs=65.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|++...+.....++++.|..|+.+...|+..+ +.. .....||.|++..|..
T Consensus 61 v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~-------------------~~~~~~d~v~~~~~~p----- 116 (218)
T 3dxy_A 61 FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKM-------------------IPDNSLRMVQLFFPDP----- 116 (218)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHH-------------------SCTTCEEEEEEESCCC-----
T ss_pred EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH-------------------cCCCChheEEEeCCCC-----
Confidence 799999999999999999999999999999998763 210 1125799999875431
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
|.+... .... -.|..+|..+.++|||||+++.+|-.
T Consensus 117 ------~~~~~~-~~rr--~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 117 ------WHKARH-NKRR--IVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp ------CCSGGG-GGGS--SCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ------ccchhh-hhhh--hhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 211000 0001 12456899999999999999998853
No 70
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.81 E-value=0.0029 Score=62.87 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=62.6
Q ss_pred EEEEcCChhHHHHHHHHHHHh-C--CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-C--TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-g--~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG 78 (620)
|++.|+++..+.....++++. | ..++.+...|+...+. ....||.|++|.|
T Consensus 127 v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~---------------------~~~~~D~v~~~~~----- 180 (280)
T 1i9g_A 127 VISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL---------------------PDGSVDRAVLDML----- 180 (280)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC---------------------CTTCEEEEEEESS-----
T ss_pred EEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC---------------------CCCceeEEEECCc-----
Confidence 789999999999999999988 7 6789999998876531 1156999999876
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 79 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 79 tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+.| .+|.++.++|++||+++.++++.
T Consensus 181 ------~~~----------------~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 181 ------APW----------------EVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp ------CGG----------------GGHHHHHHHEEEEEEEEEEESSH
T ss_pred ------CHH----------------HHHHHHHHhCCCCCEEEEEeCCH
Confidence 111 46889999999999999988765
No 71
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.79 E-value=0.0041 Score=56.75 Aligned_cols=97 Identities=15% Similarity=0.066 Sum_probs=70.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+....+++++.+.+++.+...|+.. + + ....||.|+++.+
T Consensus 60 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~-~--------------------~~~~~D~i~~~~~-------- 109 (183)
T 2yxd_A 60 VYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V-L--------------------DKLEFNKAFIGGT-------- 109 (183)
T ss_dssp EEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H-G--------------------GGCCCSEEEECSC--------
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c-c--------------------cCCCCcEEEECCc--------
Confidence 78999999999999999999998889988888754 1 0 1156999999877
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
.+ ...+|..+.++ +||++++++|+... -.-+...|++++-.++.+.+
T Consensus 110 --~~----------------~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 110 --KN----------------IEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp --SC----------------HHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEE
T ss_pred --cc----------------HHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEe
Confidence 00 13456666666 99999999986543 23356667777655555543
No 72
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.78 E-value=0.0021 Score=64.20 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=62.9
Q ss_pred EEEEcCChhHHHHHHHHHHH---hCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKR---MCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kR---lg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|+|.|+++.-+.+.+.+++. .+.. ++.+.+.|+..+..-.... ......||.|++++|....
T Consensus 63 v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~--------------~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 63 VTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA--------------GLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp EEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT--------------TCCTTCEEEEEECCCC---
T ss_pred EEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh--------------ccCCCCcCEEEECCCCcCC
Confidence 78999999999999999988 7765 5999999987752100000 0112579999999999877
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
+ -.++++..+.... .........+|..+.++||+||+++...
T Consensus 129 ~-~~~~~~~~~~~a~---~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 129 G-DRRTPDALKAEAH---AMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp ----------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-CCCCcCHHHHHHh---hcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 5 3445554221100 0001124678999999999999998753
No 73
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.72 E-value=0.0015 Score=62.73 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=62.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCC-CCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFP-GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p-~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...++++++.|..+ +.+...|+..+. ... .......||.|++|++
T Consensus 92 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----------------~~~~~~~fD~v~~~~~------ 149 (225)
T 3tr6_A 92 LITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELI----------------HAGQAWQYDLIYIDAD------ 149 (225)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH----------------TTTCTTCEEEEEECSC------
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhh----------------hccCCCCccEEEECCC------
Confidence 7899999999999999999999875 888888885421 100 0001157999999986
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
...+..+|..++++|||||+||...+..
T Consensus 150 -------------------~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 150 -------------------KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp -------------------GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred -------------------HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 1112457889999999999998866553
No 74
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.71 E-value=0.0041 Score=58.95 Aligned_cols=75 Identities=13% Similarity=0.052 Sum_probs=59.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+...+.++++++.+++.+...|+...+. ....||.|+++..+..
T Consensus 102 v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~~D~i~~~~~~~~----- 155 (210)
T 3lbf_A 102 VCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ---------------------ARAPFDAIIVTAAPPE----- 155 (210)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG---------------------GGCCEEEEEESSBCSS-----
T ss_pred EEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc---------------------cCCCccEEEEccchhh-----
Confidence 78999999999999999999999999999998866431 1257999999865411
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
-+ . .+.++|||||+||.+...
T Consensus 156 -~~--------~--------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 156 -IP--------T--------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -CC--------T--------------HHHHTEEEEEEEEEEECS
T ss_pred -hh--------H--------------HHHHhcccCcEEEEEEcC
Confidence 11 0 357899999999998876
No 75
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.67 E-value=0.0057 Score=64.55 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=74.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+|+.-+...+.++++.|. .++.+...|+..++. ....||.|++|+|..-
T Consensus 244 v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~---------------------~~~~fD~Ii~npPyg~---- 298 (373)
T 3tm4_A 244 IIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ---------------------YVDSVDFAISNLPYGL---- 298 (373)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG---------------------TCSCEEEEEEECCCC-----
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc---------------------ccCCcCEEEECCCCCc----
Confidence 78999999999999999999998 689999999977642 1156999999999521
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
+ ......+..+..+++..+.+.| ||.++|.||+ ...+...+.+.+
T Consensus 299 --------r--~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~------~~~~~~~~~~~G 343 (373)
T 3tm4_A 299 --------K--IGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE------KKAIEEAIAENG 343 (373)
T ss_dssp ---------------CCHHHHHHHHHHHHHHHE--EEEEEEEESC------HHHHHHHHHHTT
T ss_pred --------c--cCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC------HHHHHHHHHHcC
Confidence 1 1122346777889999999988 8999999994 344556666654
No 76
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.65 E-value=0.0077 Score=58.63 Aligned_cols=83 Identities=14% Similarity=0.051 Sum_probs=64.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+.....++...|..+ +.+...|+..+|. ....||.|++.-. +
T Consensus 72 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l 124 (257)
T 3f4k_A 72 ITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF---------------------QNEELDLIWSEGA------I 124 (257)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS---------------------CTTCEEEEEEESC------S
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC---------------------CCCCEEEEEecCh------H
Confidence 7899999999999999999999876 9999999977652 1257999998622 1
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.. +. ...+|..+.++|||||+++.++++..+
T Consensus 125 ~~-------~~----------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 125 YN-------IG----------FERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp CC-------CC----------HHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred hh-------cC----------HHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 11 00 146889999999999999999976433
No 77
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.64 E-value=0.0021 Score=63.16 Aligned_cols=50 Identities=18% Similarity=0.018 Sum_probs=37.5
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
..||.|++++|......+.. ......+..+|.++.++|||||+|+++.++
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~-------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEG-------------QVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSS-------------CCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccc-------------cccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 37999999999764432211 133466788999999999999999996665
No 78
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.62 E-value=0.0056 Score=65.23 Aligned_cols=89 Identities=11% Similarity=0.119 Sum_probs=69.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+...+.++++.+.. +.+...|+..++. ....||.|++++|....+..
T Consensus 258 V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~---------------------~~~~fD~Ii~npp~~~~~~~- 314 (381)
T 3dmg_A 258 VVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALT---------------------EEARFDIIVTNPPFHVGGAV- 314 (381)
T ss_dssp EEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSC---------------------TTCCEEEEEECCCCCTTCSS-
T ss_pred EEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhccc---------------------cCCCeEEEEECCchhhcccc-
Confidence 789999999999999999998865 6777788766431 12579999999998642211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
......++|..+.++||+||+++.++++..+.
T Consensus 315 ----------------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 315 ----------------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp ----------------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred ----------------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 12345688999999999999999999888764
No 79
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.62 E-value=0.0019 Score=66.21 Aligned_cols=96 Identities=19% Similarity=0.104 Sum_probs=63.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+|+.-+..+..++++.+.+++.+.+.|+..++. ..||.|++|.|+....-
T Consensus 67 v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~-----------------------~~~D~Vv~n~py~~~~~-- 121 (299)
T 2h1r_A 67 VITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF-----------------------PKFDVCTANIPYKISSP-- 121 (299)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-----------------------CCCSEEEEECCGGGHHH--
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-----------------------ccCCEEEEcCCcccccH--
Confidence 79999999999999999988888899999999876541 36899999999876532
Q ss_pred cCccccc--ccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 82 KAPDIWR--KWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 82 K~pdiw~--~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.+++ ...+.-...+-..|+ ..|.++++++|...|+|||...
T Consensus 122 ---~~~~ll~~~~~~~~~~l~~Q~---e~a~rlla~~G~~~y~~ls~~~ 164 (299)
T 2h1r_A 122 ---LIFKLISHRPLFKCAVLMFQK---EFAERMLANVGDSNYSRLTINV 164 (299)
T ss_dssp ---HHHHHHHCSSCCSEEEEEEEH---HHHHHHTCCTTSTTCCHHHHHH
T ss_pred ---HHHHHHhcCCccceeeehHHH---HHHHHHhcCCCCcchhHHHHHH
Confidence 1110 000000011112333 4567789999999999998544
No 80
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.61 E-value=0.0019 Score=59.62 Aligned_cols=84 Identities=14% Similarity=0.051 Sum_probs=61.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+..++.+++..+.. ++.+...|+..+.. .....||.|++|+|....
T Consensus 57 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------------------~~~~~fD~i~~~~~~~~~--- 113 (177)
T 2esr_A 57 AVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID--------------------CLTGRFDLVFLDPPYAKE--- 113 (177)
T ss_dssp EEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH--------------------HBCSCEEEEEECCSSHHH---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH--------------------hhcCCCCEEEECCCCCcc---
Confidence 789999999999999999998875 78899888865310 011459999999886311
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHH--HhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rA--l~lLk~GG~LVYSTCSlnP 128 (620)
. + ..++... .++||+||+++.++++-..
T Consensus 114 -----~-----------~----~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 114 -----T-----------I----VATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp -----H-----------H----HHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred -----h-----------H----HHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 0 0 1222222 5899999999999887653
No 81
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=96.55 E-value=0.0071 Score=65.29 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=76.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC--cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++.-+.+.+.++...|.. ++.+.+.|+...+. ...||.|++++|.++...
T Consensus 211 i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~----------------------~~~fD~Iv~NPPf~~~~~ 268 (445)
T 2okc_A 211 LHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP----------------------STLVDVILANPPFGTRPA 268 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC----------------------SSCEEEEEECCCSSCCCT
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc----------------------cCCcCEEEECCCCCCccc
Confidence 789999999888888888877765 56677777755331 137999999999998765
Q ss_pred cccC---cccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC--CChhcc-HHHHHHHHHhC
Q 007036 80 LRKA---PDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVEN-EAVVAEILRKC 142 (620)
Q Consensus 80 lrK~---pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS--lnP~EN-EaVV~~~L~~~ 142 (620)
..+. .+.+ + + -...|...|.+++.+||+||++++.++. |..... +.+-.++++.+
T Consensus 269 ~~~~~~~~~~~--~-~-----~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~ 329 (445)
T 2okc_A 269 GSVDINRPDFY--V-E-----TKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDF 329 (445)
T ss_dssp TCCCCCCTTSS--S-C-----CSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHE
T ss_pred ccchhhHhhcC--C-C-----CcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcC
Confidence 4321 1111 1 1 1234778999999999999999999865 222222 34545566654
No 82
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.54 E-value=0.0024 Score=63.06 Aligned_cols=103 Identities=14% Similarity=0.198 Sum_probs=69.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+...+ .+ ..++.+...|+..+..+. ......||.|++|+.
T Consensus 112 V~gvD~s~~~l~~a~----~~-~~~v~~~~gD~~~~~~l~-----------------~~~~~~fD~I~~d~~-------- 161 (236)
T 2bm8_A 112 VIGIDRDLSRCQIPA----SD-MENITLHQGDCSDLTTFE-----------------HLREMAHPLIFIDNA-------- 161 (236)
T ss_dssp EEEEESCCTTCCCCG----GG-CTTEEEEECCSSCSGGGG-----------------GGSSSCSSEEEEESS--------
T ss_pred EEEEeCChHHHHHHh----cc-CCceEEEECcchhHHHHH-----------------hhccCCCCEEEECCc--------
Confidence 688888877655433 22 267888888886641100 001136999999864
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHh-hcccCCEEEEee-cCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGIS-LLKVGGRIVYST-CSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~-lLk~GG~LVYST-CSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
+. ....+|..+.+ +|||||+||++. |...+..+.+.+..+|+.++..++++..
T Consensus 162 -~~----------------~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 162 -HA----------------NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp -CS----------------SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETT
T ss_pred -hH----------------hHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcch
Confidence 10 01357888886 999999999974 5666677888999999998756777543
No 83
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.52 E-value=0.0037 Score=62.09 Aligned_cols=83 Identities=20% Similarity=0.226 Sum_probs=61.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...++++++.|. .++.+...|+..+ +.+. . .......||.|++|+++.
T Consensus 107 v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~--~-------------~~~~~~~fD~V~~d~~~~---- 167 (247)
T 1sui_A 107 ILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMI--K-------------DEKNHGSYDFIFVDADKD---- 167 (247)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH--H-------------SGGGTTCBSEEEECSCST----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHH--h-------------ccCCCCCEEEEEEcCchH----
Confidence 78999999999999999999998 4788888888553 2100 0 000025799999997521
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
....+|..++++|||||+||+..+
T Consensus 168 ---------------------~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 168 ---------------------NYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp ---------------------THHHHHHHHHHHBCTTCCEEEECT
T ss_pred ---------------------HHHHHHHHHHHhCCCCeEEEEecC
Confidence 114678889999999999998653
No 84
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.51 E-value=0.0047 Score=59.83 Aligned_cols=77 Identities=13% Similarity=0.053 Sum_probs=60.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.++....++++..+. .++.+...|+..... ....||.|++|+|
T Consensus 116 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~~D~v~~~~~------- 167 (248)
T 2yvl_A 116 VWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV---------------------PEGIFHAAFVDVR------- 167 (248)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC---------------------CTTCBSEEEECSS-------
T ss_pred EEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc---------------------CCCcccEEEECCc-------
Confidence 78999999999999999999987 688888888755320 0146999999766
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+| ..+|..+.++|++||+++..+-+.
T Consensus 168 --~~------------------~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 168 --EP------------------WHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp --CG------------------GGGHHHHHHHBCTTCEEEEEESSH
T ss_pred --CH------------------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 11 234678899999999999988654
No 85
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.50 E-value=0.026 Score=58.08 Aligned_cols=75 Identities=19% Similarity=0.128 Sum_probs=55.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhC-----------CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEE
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC-----------TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLC 70 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg-----------~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILl 70 (620)
|+|.|+++..+...+.++.+++ ..++.+...|+..+.. ......||.|++
T Consensus 133 v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~-------------------~~~~~~fD~V~~ 193 (336)
T 2b25_A 133 VISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE-------------------DIKSLTFDAVAL 193 (336)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--------------------------EEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc-------------------ccCCCCeeEEEE
Confidence 7999999999999999998864 3688898888876531 001146999999
Q ss_pred cCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 71 DVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 71 DvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
|.|.. |. +|..+.++|||||+|+-.
T Consensus 194 ~~~~~--------------~~-------------~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 194 DMLNP--------------HV-------------TLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp CSSST--------------TT-------------THHHHGGGEEEEEEEEEE
T ss_pred CCCCH--------------HH-------------HHHHHHHhcCCCcEEEEE
Confidence 87621 11 678899999999999843
No 86
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.47 E-value=0.0098 Score=56.04 Aligned_cols=78 Identities=18% Similarity=0.132 Sum_probs=62.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+..+.+++++.+..++.+...|+..++. ...||.|++..-
T Consensus 92 v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------------------~~~~D~i~~~~~-------- 141 (207)
T 1jsx_A 92 FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS----------------------EPPFDGVISRAF-------- 141 (207)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC----------------------CSCEEEEECSCS--------
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc----------------------cCCcCEEEEecc--------
Confidence 78999999999999999999999889899888876531 156999997320
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
+. ...+|..+.++|+|||+++.......
T Consensus 142 -----------------~~-~~~~l~~~~~~L~~gG~l~~~~~~~~ 169 (207)
T 1jsx_A 142 -----------------AS-LNDMVSWCHHLPGEQGRFYALKGQMP 169 (207)
T ss_dssp -----------------SS-HHHHHHHHTTSEEEEEEEEEEESSCC
T ss_pred -----------------CC-HHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 00 24789999999999999999866543
No 87
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.46 E-value=0.003 Score=60.73 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=59.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhC-----CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg-----~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|++...+...++++++.+ ..++.+...|+...+.- .......||.|+++.++..
T Consensus 112 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-----------------~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 112 VIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE-----------------EKKELGLFDAIHVGASASE 174 (227)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH-----------------HHHHHCCEEEEEECSBBSS
T ss_pred EEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc-----------------cCccCCCcCEEEECCchHH
Confidence 7899999999999999999988 67899998888653200 0001256999999988742
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
++..+.++||+||+||.++=
T Consensus 175 ----------------------------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 175 ----------------------------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp ----------------------------CCHHHHHHEEEEEEEEEEEE
T ss_pred ----------------------------HHHHHHHhcCCCcEEEEEEc
Confidence 23667889999999988753
No 88
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.44 E-value=0.0062 Score=62.47 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=59.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+...++++++.|..++.+...|+...+. ....||.|+++.++..-+
T Consensus 103 v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~---------------------~~~~fD~Iv~~~~~~~~~--- 158 (317)
T 1dl5_A 103 VVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP---------------------EFSPYDVIFVTVGVDEVP--- 158 (317)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG---------------------GGCCEEEEEECSBBSCCC---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc---------------------cCCCeEEEEEcCCHHHHH---
Confidence 89999999999999999999999999999888866431 125699999998765322
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
..+.++|||||+|+.+..
T Consensus 159 -------------------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 159 -------------------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp -------------------------HHHHHHEEEEEEEEEEBC
T ss_pred -------------------------HHHHHhcCCCcEEEEEEC
Confidence 245679999999999843
No 89
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.43 E-value=0.024 Score=53.91 Aligned_cols=112 Identities=8% Similarity=0.002 Sum_probs=74.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-----cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-----nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+++.-+.....++...+.+ ++.+...|+...+. ....||.|++..
T Consensus 56 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~v~~~~---- 110 (217)
T 3jwh_A 56 ITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK---------------------RFHGYDAATVIE---- 110 (217)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG---------------------GGCSCSEEEEES----
T ss_pred EEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc---------------------cCCCcCEEeeHH----
Confidence 789999999999999888877765 78888888754321 125799999642
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC----------------------CChhccHHH
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS----------------------MNPVENEAV 134 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS----------------------lnP~ENEaV 134 (620)
++. .+.. ....++|..+.++|||||.++.+.+. +.+.|=.+-
T Consensus 111 --~l~-------~~~~-------~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (217)
T 3jwh_A 111 --VIE-------HLDL-------SRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNW 174 (217)
T ss_dssp --CGG-------GCCH-------HHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHH
T ss_pred --HHH-------cCCH-------HHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHH
Confidence 111 1111 12367899999999999988777664 133333344
Q ss_pred HHHHHHhCCCceEEeeCCCc
Q 007036 135 VAEILRKCEGSVELVDVSNE 154 (620)
Q Consensus 135 V~~~L~~~~~~~eLvd~~~~ 154 (620)
+..++++++-.+++..+.+.
T Consensus 175 ~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 175 ANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp HHHHHHHSSEEEEECCCSCC
T ss_pred HHHHHHHcCceEEEEecCCc
Confidence 44777777645555555443
No 90
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.39 E-value=0.0037 Score=56.64 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=62.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+...+.+++..+. ++.+.+.|+..+... .......||.|++|+|.. +..
T Consensus 66 v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-----------------~~~~~~~~D~i~~~~~~~--~~~- 124 (171)
T 1ws6_A 66 AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPE-----------------AKAQGERFTVAFMAPPYA--MDL- 124 (171)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHH-----------------HHHTTCCEEEEEECCCTT--SCT-
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHh-----------------hhccCCceEEEEECCCCc--hhH-
Confidence 78999999999999999999888 888888887653100 000113799999999865 210
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhc
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 130 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~E 130 (620)
......+ .+ .++|||||+++.++++.....
T Consensus 125 -----------------~~~~~~~-~~-~~~L~~gG~~~~~~~~~~~~~ 154 (171)
T 1ws6_A 125 -----------------AALFGEL-LA-SGLVEAGGLYVLQHPKDLYLP 154 (171)
T ss_dssp -----------------THHHHHH-HH-HTCEEEEEEEEEEEETTSCCT
T ss_pred -----------------HHHHHHH-Hh-hcccCCCcEEEEEeCCccCCc
Confidence 0111122 22 599999999999988876554
No 91
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.35 E-value=0.033 Score=54.05 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=63.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++...+.+++.+...|+..+|. ....||.|++... +.
T Consensus 46 v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~ 98 (239)
T 1xxl_A 46 CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF---------------------PDDSFDIITCRYA------AH 98 (239)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS---------------------CTTCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCC---------------------CCCcEEEEEECCc------hh
Confidence 78999999999999999999998899999999877652 1257999997521 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.|. + ...+|.++.++|||||+++.++...
T Consensus 99 -------~~~--~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 99 -------HFS--D-------VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -------GCS--C-------HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -------hcc--C-------HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 111 1 2478999999999999999987654
No 92
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.34 E-value=0.0027 Score=66.94 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=55.3
Q ss_pred CCccEEEEcCCCccccccccC-----cccccccCc--chhhhhHHHHHHHHHHHHhhcccCCEEEEeecC--CChhccHH
Q 007036 63 LLFDRVLCDVPCSGDGTLRKA-----PDIWRKWNV--GLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEA 133 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~-----pdiw~~w~~--~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS--lnP~ENEa 133 (620)
..||.|++++|..+.+...+. .+....+.+ ....+...++..+|.+++++|++||++++.+++ ++....+.
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~ 176 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFAL 176 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHH
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHH
Confidence 579999999999887753211 111110100 111223557789999999999999999999987 33444566
Q ss_pred HHHHHHHhCCCceEEeeC
Q 007036 134 VVAEILRKCEGSVELVDV 151 (620)
Q Consensus 134 VV~~~L~~~~~~~eLvd~ 151 (620)
+.+.+++.. ...++.+
T Consensus 177 lr~~l~~~~--~~~i~~l 192 (421)
T 2ih2_A 177 LREFLAREG--KTSVYYL 192 (421)
T ss_dssp HHHHHHHHS--EEEEEEE
T ss_pred HHHHHHhcC--CeEEEEC
Confidence 666666543 2555554
No 93
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.33 E-value=0.01 Score=58.45 Aligned_cols=84 Identities=13% Similarity=0.038 Sum_probs=65.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+.....+++..|.+ ++.+...|+..+|. ....||.|++......
T Consensus 72 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~i~~~~~~~~---- 126 (267)
T 3kkz_A 72 VTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF---------------------RNEELDLIWSEGAIYN---- 126 (267)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---------------------CTTCEEEEEESSCGGG----
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC---------------------CCCCEEEEEEcCCcee----
Confidence 789999999999999999999985 59999999977652 1257999997643211
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
+. ...+|..+.++|||||+++.++++..+.
T Consensus 127 ---------~~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 156 (267)
T 3kkz_A 127 ---------IG----------FERGLNEWRKYLKKGGYLAVSECSWFTD 156 (267)
T ss_dssp ---------TC----------HHHHHHHHGGGEEEEEEEEEEEEEESSS
T ss_pred ---------cC----------HHHHHHHHHHHcCCCCEEEEEEeeecCC
Confidence 10 1457899999999999999999875443
No 94
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.33 E-value=0.028 Score=53.48 Aligned_cols=114 Identities=8% Similarity=-0.054 Sum_probs=74.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-----cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-----nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+++.-+...+.++...+.+ ++.+...|+...+. ....||.|++--
T Consensus 56 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~V~~~~---- 110 (219)
T 3jwg_A 56 ITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK---------------------RFSGYDAATVIE---- 110 (219)
T ss_dssp EEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG---------------------GGTTCSEEEEES----
T ss_pred EEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc---------------------ccCCCCEEEEHH----
Confidence 789999999999999888776654 78888888754331 125799999631
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC----------------------ChhccHHH
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM----------------------NPVENEAV 134 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl----------------------nP~ENEaV 134 (620)
++. .+.. ....++|..+.++|||||.++.+.++- .+.|=..-
T Consensus 111 --~l~-------~~~~-------~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (219)
T 3jwg_A 111 --VIE-------HLDE-------NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTW 174 (219)
T ss_dssp --CGG-------GCCH-------HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHH
T ss_pred --HHH-------hCCH-------HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHH
Confidence 111 1111 113678999999999999777666542 23233333
Q ss_pred HHHHHHhCCCceEEeeCCCcCC
Q 007036 135 VAEILRKCEGSVELVDVSNEVP 156 (620)
Q Consensus 135 V~~~L~~~~~~~eLvd~~~~lp 156 (620)
+..++++++-.+++..+.+.-|
T Consensus 175 ~~~l~~~~Gf~v~~~~~g~~~~ 196 (219)
T 3jwg_A 175 AVKVAEKYGYSVRFLQIGEIDD 196 (219)
T ss_dssp HHHHHHHHTEEEEEEEESCCCT
T ss_pred HHHHHHHCCcEEEEEecCCccc
Confidence 4477777765666666655444
No 95
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.32 E-value=0.011 Score=61.30 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=60.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.++..-+.++++.|..++.+...|+..+| ...||.|++++-
T Consensus 149 V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-----------------------d~~FDvV~~~a~-------- 197 (298)
T 3fpf_A 149 VNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-----------------------GLEFDVLMVAAL-------- 197 (298)
T ss_dssp EEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-----------------------GCCCSEEEECTT--------
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-----------------------CCCcCEEEECCC--------
Confidence 7999999999999999999999989999999997653 156999998642
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
.++ ..+++....+.|||||+||..
T Consensus 198 -~~d----------------~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 198 -AEP----------------KRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp -CSC----------------HHHHHHHHHHHCCTTCEEEEE
T ss_pred -ccC----------------HHHHHHHHHHHcCCCcEEEEE
Confidence 011 367889999999999999974
No 96
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.31 E-value=0.0053 Score=59.07 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=57.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+..+..++++. +|+.+...|+....... .....||.|++|+|
T Consensus 101 v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~------------------~~~~~~D~v~~~~~-------- 152 (227)
T 1g8a_A 101 IFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYR------------------ALVPKVDVIFEDVA-------- 152 (227)
T ss_dssp EEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGT------------------TTCCCEEEEEECCC--------
T ss_pred EEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhh------------------cccCCceEEEECCC--------
Confidence 789999999999888888765 78888888886532100 01146999999987
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
.++ ....+|.++.++|||||+++.+.+
T Consensus 153 -~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 153 -QPT---------------QAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp -STT---------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CHh---------------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 111 123348889999999999999843
No 97
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.31 E-value=0.0038 Score=59.96 Aligned_cols=84 Identities=15% Similarity=0.043 Sum_probs=62.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCC-CCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFP-GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p-~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...++++++.|. .++.+...|+..+. .+. .......||.|++|++.
T Consensus 97 v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~----------------~~~~~~~~D~v~~d~~~----- 155 (229)
T 2avd_A 97 VVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELL----------------AAGEAGTFDVAVVDADK----- 155 (229)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH----------------HTTCTTCEEEEEECSCS-----
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHH----------------hcCCCCCccEEEECCCH-----
Confidence 78999999999999999999987 57888888875421 100 00001569999999860
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.....++..++++|++||+||...+..
T Consensus 156 --------------------~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 156 --------------------ENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp --------------------TTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred --------------------HHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 112467888999999999999977653
No 98
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=96.27 E-value=0.036 Score=51.86 Aligned_cols=83 Identities=13% Similarity=0.038 Sum_probs=62.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++...+.....++...+. ++.+...|+..++. ....||.|++- . ..
T Consensus 54 v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~---------------------~~~~fD~v~~~-~----~~-- 104 (202)
T 2kw5_A 54 VTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDI---------------------VADAWEGIVSI-F----CH-- 104 (202)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSC---------------------CTTTCSEEEEE-C----CC--
T ss_pred EEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCC---------------------CcCCccEEEEE-h----hc--
Confidence 78999999999999999888876 78888888866541 12579999972 1 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
+.. .....+|.++.++|||||+++.++.+...
T Consensus 105 --------~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 105 --------LPS-------SLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp --------CCH-------HHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred --------CCH-------HHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 111 12467899999999999999999876543
No 99
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.25 E-value=0.0059 Score=61.91 Aligned_cols=85 Identities=16% Similarity=0.090 Sum_probs=61.7
Q ss_pred EEEEcCChhHHHHHHHHHHHh-----------CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEE
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-----------CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLC 70 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-----------g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILl 70 (620)
|++.|+|+.-+...+.++ ++ ..+++.+...|+..+.. . ...||.|++
T Consensus 101 v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--------------------~-~~~fD~Ii~ 158 (281)
T 1mjf_A 101 VIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK--------------------N-NRGFDVIIA 158 (281)
T ss_dssp EEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH--------------------H-CCCEEEEEE
T ss_pred EEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc--------------------c-cCCeeEEEE
Confidence 789999999999998887 55 34678888888855310 0 256999999
Q ss_pred cCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 71 DVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 71 DvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
|+|+. .| + ...| .+.+++..+.++|+|||++|..+++.
T Consensus 159 d~~~~-~~-------------~--~~~l--~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 159 DSTDP-VG-------------P--AKVL--FSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp ECCCC-C--------------------T--TSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCCCC-CC-------------c--chhh--hHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 99852 11 1 0111 24678889999999999999998875
No 100
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.22 E-value=0.0017 Score=64.46 Aligned_cols=84 Identities=13% Similarity=0.057 Sum_probs=61.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...+.++++.|.. ++.+...|+..+..... .......||.|++|+++..
T Consensus 88 v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~---------------~~~~~~~fD~V~~d~~~~~---- 148 (242)
T 3r3h_A 88 VITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLL---------------NEGGEHQFDFIFIDADKTN---- 148 (242)
T ss_dssp EEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHH---------------HHHCSSCEEEEEEESCGGG----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHh---------------hccCCCCEeEEEEcCChHH----
Confidence 789999999999999999999985 79999988855321000 0000257999999975110
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
....|..++++|||||+||+..+.
T Consensus 149 ---------------------~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 149 ---------------------YLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp ---------------------HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ---------------------hHHHHHHHHHhcCCCeEEEEECCc
Confidence 133688899999999999976544
No 101
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.21 E-value=0.025 Score=53.03 Aligned_cols=94 Identities=13% Similarity=0.101 Sum_probs=68.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+.....+++..+.. ++.+...|+..+|. ....||.|++... +
T Consensus 69 v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~~D~v~~~~~------l 121 (219)
T 3dlc_A 69 IRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI---------------------EDNYADLIVSRGS------V 121 (219)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS---------------------CTTCEEEEEEESC------G
T ss_pred EEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC---------------------CcccccEEEECch------H
Confidence 789999999999999999999864 79999999877651 1257999998532 1
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEI 138 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~ 138 (620)
..-++ ...+|.++.++|||||+++.++..-.+.-.+.+...+
T Consensus 122 ~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 163 (219)
T 3dlc_A 122 FFWED----------------VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEM 163 (219)
T ss_dssp GGCSC----------------HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHH
T ss_pred hhccC----------------HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHH
Confidence 11011 2568999999999999999987555554334333333
No 102
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.20 E-value=0.0075 Score=55.53 Aligned_cols=89 Identities=19% Similarity=0.109 Sum_probs=61.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+...+.++++.+. +++.+.+.|+..+... .......||.|++|+|-. .+
T Consensus 70 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~~~~~fD~i~~~~~~~-~~-- 129 (187)
T 2fhp_A 70 SICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ-----------------FYEEKLQFDLVLLDPPYA-KQ-- 129 (187)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH-----------------HHHTTCCEEEEEECCCGG-GC--
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH-----------------HHhcCCCCCEEEECCCCC-ch--
Confidence 78999999999999999999986 5788988888653110 000125799999998722 00
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
. . .. ..+.+ .+.++|+|||+++.++|+-..
T Consensus 130 -----~-----~------~~-~~~~l-~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 130 -----E-----I------VS-QLEKM-LERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp -----C-----H------HH-HHHHH-HHTTCEEEEEEEEEEEETTCC
T ss_pred -----h-----H------HH-HHHHH-HHhcccCCCCEEEEEeCCccc
Confidence 0 0 00 01112 248899999999999998554
No 103
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.16 E-value=0.029 Score=54.09 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=73.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhC-CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC-TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg-~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+.....++...+ ..++.+...|+..++. ...||.|++-. ++
T Consensus 91 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------------------~~~fD~v~~~~------~l 142 (235)
T 3lcc_A 91 VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP----------------------TELFDLIFDYV------FF 142 (235)
T ss_dssp EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC----------------------SSCEEEEEEES------ST
T ss_pred EEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC----------------------CCCeeEEEECh------hh
Confidence 7899999999988888877643 3578999999877541 14799999732 11
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhc-------cHHHHHHHHHhCCCceEEeeC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE-------NEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~E-------NEaVV~~~L~~~~~~~eLvd~ 151 (620)
.. +.+. ....+|.++.++|||||+++..+.+..... ..+-+..+|.+.+ ++++.+
T Consensus 143 ~~-------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 204 (235)
T 3lcc_A 143 CA-------IEPE-------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIG--FKAVSV 204 (235)
T ss_dssp TT-------SCGG-------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGT--EEEEEE
T ss_pred hc-------CCHH-------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcC--CeEEEE
Confidence 11 1111 235788999999999999998776554322 4566788888765 555554
No 104
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.15 E-value=0.028 Score=54.52 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=62.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+.....+++..|.. ++.+...|+..++. ...||.|++ .+++
T Consensus 62 v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------------------~~~fD~V~~------~~~~ 113 (256)
T 1nkv_A 62 GTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA----------------------NEKCDVAAC------VGAT 113 (256)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC----------------------SSCEEEEEE------ESCG
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc----------------------CCCCCEEEE------CCCh
Confidence 689999999999999999998875 89999988877542 156999997 1222
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
..-++ ...+|..+.++|||||+++.++...
T Consensus 114 ~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 114 WIAGG----------------FAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp GGTSS----------------SHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred HhcCC----------------HHHHHHHHHHHcCCCeEEEEecCcc
Confidence 11111 2678899999999999999987544
No 105
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.12 E-value=0.017 Score=56.99 Aligned_cols=91 Identities=13% Similarity=0.152 Sum_probs=60.9
Q ss_pred EEEEcCChhHHHHHHHHHHHh------CCCcEEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRM------CTANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 74 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl------g~~nv~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC 74 (620)
|+|.|++...+.....+++.+ +..|+.+...|+.. +|.. .....||+|++..|
T Consensus 73 v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~-------------------~~~~~~D~v~~~~~- 132 (235)
T 3ckk_A 73 ILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNF-------------------FYKGQLTKMFFLFP- 132 (235)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHH-------------------CCTTCEEEEEEESC-
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhh-------------------CCCcCeeEEEEeCC-
Confidence 799999999999888877653 57899999999875 3210 01256999987543
Q ss_pred ccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 75 SGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 75 SGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
+-|.+-.. .... -.|..+|..+.++|||||+|+.+|+.
T Consensus 133 ----------dp~~k~~h-~krr--~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 133 ----------DPHFKRTK-HKWR--IISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp ----------C--------------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ----------Cchhhhhh-hhhh--hhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 22322000 0000 12457899999999999999999863
No 106
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.08 E-value=0.017 Score=57.38 Aligned_cols=97 Identities=15% Similarity=0.109 Sum_probs=70.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+|+..+...++++.+.+.. +.+...|+... + ....||.|+++.+.
T Consensus 145 v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~--~--------------------~~~~fD~Vv~n~~~------- 194 (254)
T 2nxc_A 145 ALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA--L--------------------PFGPFDLLVANLYA------- 194 (254)
T ss_dssp EEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH--G--------------------GGCCEEEEEEECCH-------
T ss_pred EEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc--C--------------------cCCCCCEEEECCcH-------
Confidence 789999999999999999998876 66666665431 0 12569999987531
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..-..++..+.++|||||+++.|.... +...-+..++++.+ ++++.+
T Consensus 195 ------------------~~~~~~l~~~~~~LkpgG~lils~~~~---~~~~~v~~~l~~~G--f~~~~~ 241 (254)
T 2nxc_A 195 ------------------ELHAALAPRYREALVPGGRALLTGILK---DRAPLVREAMAGAG--FRPLEE 241 (254)
T ss_dssp ------------------HHHHHHHHHHHHHEEEEEEEEEEEEEG---GGHHHHHHHHHHTT--CEEEEE
T ss_pred ------------------HHHHHHHHHHHHHcCCCCEEEEEeecc---CCHHHHHHHHHHCC--CEEEEE
Confidence 112578999999999999999987643 34566677777765 555544
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.04 E-value=0.015 Score=58.17 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=57.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+..|.+++++. +|+..+..|+...... ......||.|++|.+...+
T Consensus 105 V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~------------------~~~~~~vDvVf~d~~~~~~---- 160 (233)
T 4df3_A 105 IYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKY------------------RHLVEGVDGLYADVAQPEQ---- 160 (233)
T ss_dssp EEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGG------------------TTTCCCEEEEEECCCCTTH----
T ss_pred EEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCcccc------------------ccccceEEEEEEeccCChh----
Confidence 799999999999888877654 5888887777653211 1122679999999875421
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
....|.++..+|||||+++-+.
T Consensus 161 --------------------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 161 --------------------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp --------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------HHHHHHHHHHhccCCCEEEEEE
Confidence 2457889999999999999864
No 108
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.04 E-value=0.035 Score=52.74 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=61.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-----cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-----nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+++.-+...+.++...+.. ++.+...|+..++. ....||.|++..
T Consensus 55 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~~D~v~~~~---- 109 (235)
T 3sm3_A 55 VTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF---------------------HDSSFDFAVMQA---- 109 (235)
T ss_dssp EEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS---------------------CTTCEEEEEEES----
T ss_pred EEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC---------------------CCCceeEEEEcc----
Confidence 789999999999888887776653 67888888876542 126799999842
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
++..-++. ....++|..+.++|||||+++.++....
T Consensus 110 --~l~~~~~~-------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 110 --FLTSVPDP-------------KERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp --CGGGCCCH-------------HHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred --hhhcCCCH-------------HHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 22211111 1124789999999999999999987654
No 109
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.02 E-value=0.0075 Score=58.90 Aligned_cols=85 Identities=18% Similarity=0.129 Sum_probs=62.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCC-CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++..+...+.++++.|.. ++.+...|+..+ +.+. .......||.|++|+++.
T Consensus 100 v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~----------------~~~~~~~fD~V~~d~~~~---- 159 (232)
T 3cbg_A 100 IIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLT----------------QGKPLPEFDLIFIDADKR---- 159 (232)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH----------------TSSSCCCEEEEEECSCGG----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH----------------hcCCCCCcCEEEECCCHH----
Confidence 789999999999999999999985 588888877442 1100 000015699999997520
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
....+|..++++|+|||+||+..+...
T Consensus 160 ---------------------~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 160 ---------------------NYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp ---------------------GHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred ---------------------HHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 114578889999999999999988764
No 110
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.96 E-value=0.005 Score=59.86 Aligned_cols=87 Identities=17% Similarity=0.126 Sum_probs=60.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+...+.+.++.+ .++.+...|+..+.. ......||.|++|.-+-
T Consensus 86 v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~-------------------~~~~~~fD~V~~d~~~~------ 139 (236)
T 1zx0_A 86 HWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAP-------------------TLPDGHFDGILYDTYPL------ 139 (236)
T ss_dssp EEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGG-------------------GSCTTCEEEEEECCCCC------
T ss_pred EEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhc-------------------ccCCCceEEEEECCccc------
Confidence 7899999999988888877776 678888888866410 01125799999982110
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
....|. ......+|.++.++|||||++++..++
T Consensus 140 ----~~~~~~-------~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 140 ----SEETWH-------THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ----BGGGTT-------THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ----chhhhh-------hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 001111 112356889999999999999998765
No 111
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.92 E-value=0.027 Score=53.37 Aligned_cols=83 Identities=14% Similarity=0.082 Sum_probs=61.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....+++..+ .++.+...|+..++. ....||.|++..+..
T Consensus 63 v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~---------------------~~~~~D~v~~~~~~~------ 114 (227)
T 1ve3_A 63 VVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF---------------------EDKTFDYVIFIDSIV------ 114 (227)
T ss_dssp EEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS---------------------CTTCEEEEEEESCGG------
T ss_pred EEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC---------------------CCCcEEEEEEcCchH------
Confidence 7899999999999999988877 778888888876541 125799999875410
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.+.. .-..++|.++.++|||||+++.+++..
T Consensus 115 -------~~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 115 -------HFEP-------LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp -------GCCH-------HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred -------hCCH-------HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 0011 112578999999999999999988753
No 112
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=95.92 E-value=0.018 Score=55.82 Aligned_cols=78 Identities=28% Similarity=0.381 Sum_probs=56.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.-+..+..++++. .|+.+...|+.....+. .....||.|++|+|
T Consensus 105 v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~------------------~~~~~~D~V~~~~~-------- 156 (233)
T 2ipx_A 105 VYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYR------------------MLIAMVDVIFADVA-------- 156 (233)
T ss_dssp EEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGG------------------GGCCCEEEEEECCC--------
T ss_pred EEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhc------------------ccCCcEEEEEEcCC--------
Confidence 789999998777777777665 78888888886632110 11257999999887
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
.++ ....++.++.++|||||+++.++
T Consensus 157 -~~~---------------~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 157 -QPD---------------QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp -CTT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -Ccc---------------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 111 12456778999999999999854
No 113
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=95.89 E-value=0.024 Score=53.00 Aligned_cols=65 Identities=14% Similarity=0.079 Sum_probs=43.5
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
..||.|++|..+.-.|. |. .+......++..+|..+.++|||||++|.++.. .++...+...|+.
T Consensus 105 ~~fD~v~~~~~~~~~g~----------~~-~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 105 KKIDIILSDAAVPCIGN----------KI-DDHLNSCELTLSITHFMEQYINIGGTYIVKMYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp CCEEEEEECCCCCCCSC----------HH-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC---STTHHHHHHHHHT
T ss_pred CcccEEEeCCCcCCCCC----------cc-cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC---CCCHHHHHHHHHH
Confidence 57999999976544332 11 122233466788999999999999999986643 2344455566655
No 114
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=95.85 E-value=0.065 Score=52.36 Aligned_cols=127 Identities=14% Similarity=0.153 Sum_probs=74.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc-
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG- 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG- 78 (620)
|+|.|+++.-+...+.++++.+..+ +.+.+.|+.. +... +. ......||.|++++|+-..+
T Consensus 92 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~---------------~~~~~~fD~i~~npp~~~~~~ 155 (254)
T 2h00_A 92 FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA-LK---------------EESEIIYDFCMCNPPFFANQL 155 (254)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT-ST---------------TCCSCCBSEEEECCCCC----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh-hh---------------cccCCcccEEEECCCCccCcc
Confidence 7899999999999999999999875 8999888765 2110 00 00014699999999998766
Q ss_pred ccc--cCccc--c---ccc--------CcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 79 TLR--KAPDI--W---RKW--------NVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 79 tlr--K~pdi--w---~~w--------~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
-+. ..+++ + ..+ .++. .+. +-..++..+..+++++|.++ |.+....+...+..+|++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG--~l~-~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~~~~~~l~~~G 229 (254)
T 2h00_A 156 EAKGVNSRNPRRPPPSSVNTGGITEIMAEGG--ELE-FVKRIIHDSLQLKKRLRWYS---CMLGKKCSLAPLKEELRIQG 229 (254)
T ss_dssp ---------------------CTTTTHHHHT--HHH-HHHHHHHHHHHHGGGBSCEE---EEESSTTSHHHHHHHHHHTT
T ss_pred hhcccccccccccCCHHHHhhhHHHHEecCC--EEE-EEHHHHHHHHhcccceEEEE---ECCCChhHHHHHHHHHHHcC
Confidence 111 00111 0 011 1111 222 22357777888999988654 33444555455667777765
Q ss_pred C-ceEEee
Q 007036 144 G-SVELVD 150 (620)
Q Consensus 144 ~-~~eLvd 150 (620)
- .++..+
T Consensus 230 f~~v~~~~ 237 (254)
T 2h00_A 230 VPKVTYTE 237 (254)
T ss_dssp CSEEEEEE
T ss_pred CCceEEEE
Confidence 2 244443
No 115
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.85 E-value=0.031 Score=60.32 Aligned_cols=51 Identities=16% Similarity=0.084 Sum_probs=43.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|+|.|+++.-+...+.+++..|.. +.+...|+..++. ..||.|++|+|.+|
T Consensus 315 V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~-----------------------~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 315 VKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV-----------------------KGFDTVIVDPPRAG 365 (425)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-----------------------TTCSEEEECCCTTC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-----------------------cCCCEEEEcCCccc
Confidence 799999999999999999998887 8888888866531 26999999999754
No 116
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.83 E-value=0.038 Score=51.12 Aligned_cols=80 Identities=15% Similarity=-0.006 Sum_probs=60.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+...+.+++..+.+++.+...|+..++. ...||.|++... +.
T Consensus 57 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~----------------------~~~~D~v~~~~~------l~ 108 (199)
T 2xvm_A 57 VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF----------------------DRQYDFILSTVV------LM 108 (199)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC----------------------CCCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC----------------------CCCceEEEEcch------hh
Confidence 78999999999999999998888889999888876541 156999996532 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
.+.+.+ ..++|.++.++|||||+++..+
T Consensus 109 -------~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 109 -------FLEAKT-------IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp -------GSCGGG-------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------hCCHHH-------HHHHHHHHHHhcCCCeEEEEEE
Confidence 111111 2668899999999999977644
No 117
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.80 E-value=0.027 Score=59.76 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=64.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC---cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA---NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~---nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG 78 (620)
|++.|+++..+...+.++++.|.. ++.+...|+.... ....||.|++++|.....
T Consensus 249 V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~----------------------~~~~fD~Ii~nppfh~~~ 306 (375)
T 4dcm_A 249 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV----------------------EPFRFNAVLCNPPFHQQH 306 (375)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC----------------------CTTCEEEEEECCCC----
T ss_pred EEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC----------------------CCCCeeEEEECCCcccCc
Confidence 789999999999999999998865 5777777775411 125799999999964311
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 79 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 79 tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
|.... ...++|..+.++|||||+++.++-+..+.
T Consensus 307 -----------~~~~~------~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 307 -----------ALTDN------VAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp --------------CC------HHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred -----------ccCHH------HHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 11111 12368999999999999999988776664
No 118
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.80 E-value=0.045 Score=55.05 Aligned_cols=91 Identities=14% Similarity=0.042 Sum_probs=67.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+...+.++.+.|.. ++.+...|+..++ ..||.|++- +++
T Consensus 98 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------------------~~fD~v~~~------~~~ 147 (302)
T 3hem_A 98 VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFD------------------------EPVDRIVSL------GAF 147 (302)
T ss_dssp EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCC------------------------CCCSEEEEE------SCG
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcC------------------------CCccEEEEc------chH
Confidence 789999999999999999999987 7888888886541 569999965 333
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
..-|+.+..-. ......+|..+.++|||||+++.++.+....
T Consensus 148 ~~~~d~~~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 189 (302)
T 3hem_A 148 EHFADGAGDAG-------FERYDTFFKKFYNLTPDDGRMLLHTITIPDK 189 (302)
T ss_dssp GGTTCCSSCCC-------TTHHHHHHHHHHHSSCTTCEEEEEEEECCCH
T ss_pred HhcCccccccc-------hhHHHHHHHHHHHhcCCCcEEEEEEEeccCc
Confidence 33333210000 0223578999999999999999999876643
No 119
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.76 E-value=0.0028 Score=64.54 Aligned_cols=91 Identities=21% Similarity=0.257 Sum_probs=65.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc--
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG-- 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG-- 78 (620)
|+|.|+|+.-+..+.+++...+. +++.+.+.|+..++. ..||.|+++.|+....
T Consensus 53 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-----------------------~~fD~vv~nlpy~~~~~~ 109 (285)
T 1zq9_A 53 VVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-----------------------PFFDTCVANLPYQISSPF 109 (285)
T ss_dssp EEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-----------------------CCCSEEEEECCGGGHHHH
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-----------------------hhhcEEEEecCcccchHH
Confidence 78999999999999988877765 689999999976531 2589999999988753
Q ss_pred ---ccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 79 ---TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 79 ---tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.+...+.. ...+..+|+++..|. .++|||.+ |++||+
T Consensus 110 ~~~~l~~~~~~--------~~~~~m~qkEva~r~--vlkPGg~~-y~~lsv 149 (285)
T 1zq9_A 110 VFKLLLHRPFF--------RCAILMFQREFALRL--VAKPGDKL-YCRLSI 149 (285)
T ss_dssp HHHHHHCSSCC--------SEEEEEEEHHHHHHH--HCCTTCTT-CSHHHH
T ss_pred HHHHHhcCcch--------hhhhhhhhHHHHHHH--hcCCCCcc-cchhhh
Confidence 22111111 123344566666533 68999996 999986
No 120
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=95.76 E-value=0.0083 Score=53.84 Aligned_cols=65 Identities=17% Similarity=-0.012 Sum_probs=45.3
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
..||.|++|.|+...|.. . .+....+.++..+|..+.++|++||+++.++... ++...+...+..
T Consensus 87 ~~~D~i~~~~~~~~~~~~----------~-~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~ 151 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTP----------A-VDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG---EGFDEYLREIRS 151 (180)
T ss_dssp CCEEEEEECCCCCCCSCH----------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS---TTHHHHHHHHHH
T ss_pred CceeEEEECCCccccCCC----------c-cchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC---CcHHHHHHHHHH
Confidence 579999999998766531 0 1222345667899999999999999999877543 333444555554
No 121
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.74 E-value=0.047 Score=51.63 Aligned_cols=107 Identities=20% Similarity=0.245 Sum_probs=70.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++..-+.....++...+ ++.+...|+..++. ...||.|++. +++.
T Consensus 76 v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~----------------------~~~fD~v~~~------~~l~ 125 (216)
T 3ofk_A 76 LTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST----------------------AELFDLIVVA------EVLY 125 (216)
T ss_dssp EEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC----------------------SCCEEEEEEE------SCGG
T ss_pred EEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC----------------------CCCccEEEEc------cHHH
Confidence 7899999988888877766543 88899998877651 1579999984 2222
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec------CCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC------SMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC------SlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
.-++ + ....++|.++.++|||||+++.+|. +.....+...+..++...-..++.+.+
T Consensus 126 ~~~~------~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 188 (216)
T 3ofk_A 126 YLED------M-------TQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERVQC 188 (216)
T ss_dssp GSSS------H-------HHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEEEEE
T ss_pred hCCC------H-------HHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceEEEec
Confidence 1111 0 1225789999999999999999872 333345555566666543334444443
No 122
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.72 E-value=0.027 Score=53.36 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=57.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+...++++.+.+..++.+...|+..... ....||.|+++.++...
T Consensus 105 v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~v~~~~~~~~~---- 159 (215)
T 2yxe_A 105 VVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE---------------------PLAPYDRIYTTAAGPKI---- 159 (215)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG---------------------GGCCEEEEEESSBBSSC----
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC---------------------CCCCeeEEEECCchHHH----
Confidence 78999999999999999999999898888888743110 12569999998654310
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
+ ..+.++|||||+|+.++.+
T Consensus 160 ----------~--------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 160 ----------P--------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ----------C--------------HHHHHTEEEEEEEEEEESS
T ss_pred ----------H--------------HHHHHHcCCCcEEEEEECC
Confidence 0 2678899999999998654
No 123
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.71 E-value=0.072 Score=52.84 Aligned_cols=82 Identities=13% Similarity=0.030 Sum_probs=60.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+.....++++.+. .++.+...|+..+| ..||.|++-- ++
T Consensus 90 v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------------------~~fD~v~~~~------~l 139 (287)
T 1kpg_A 90 VVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------------------------EPVDRIVSIG------AF 139 (287)
T ss_dssp EEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------------------------CCCSEEEEES------CG
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC------------------------CCeeEEEEeC------ch
Confidence 78999999999999999888876 47888888875543 4599999641 22
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
..- .+ .-...+|.++.++|||||+++.++....
T Consensus 140 ~~~-------~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 140 EHF-------GH-------ERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp GGT-------CT-------TTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred hhc-------Ch-------HHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 111 11 1136788999999999999999887654
No 124
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.69 E-value=0.0068 Score=58.52 Aligned_cols=75 Identities=8% Similarity=0.146 Sum_probs=58.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhC-----CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg-----~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+++..+...++++.+.+ ..++.+...|+.. + + .....||.|+++.++..
T Consensus 117 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~-~-------------------~~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 117 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-G-Y-------------------PPNAPYNAIHVGAAAPD 175 (227)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-C-C-------------------GGGCSEEEEEECSCBSS
T ss_pred EEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-C-C-------------------CcCCCccEEEECCchHH
Confidence 7899999999999999998877 6789988888865 1 0 01156999999988631
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
++..+.++|||||+||.++-.
T Consensus 176 ----------------------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 176 ----------------------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ----------------------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ----------------------------HHHHHHHHhcCCCEEEEEEec
Confidence 115678899999999987643
No 125
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=95.69 E-value=0.061 Score=52.04 Aligned_cols=107 Identities=14% Similarity=0.022 Sum_probs=73.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+...+.++...+..++.+...|+..++. ....||.|+++. ++.
T Consensus 105 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 157 (241)
T 2ex4_A 105 VDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP---------------------EPDSYDVIWIQW------VIG 157 (241)
T ss_dssp EEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC---------------------CSSCEEEEEEES------CGG
T ss_pred EEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC---------------------CCCCEEEEEEcc------hhh
Confidence 78999999999998888777665678888888766542 124699999762 121
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh-----------hccHHHHHHHHHhCCCceEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP-----------VENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP-----------~ENEaVV~~~L~~~~~~~eLvd 150 (620)
.-++ .....+|..+.++|||||+++.++..... .-+.+-+..+|++.+ ++++.
T Consensus 158 ~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--f~~~~ 221 (241)
T 2ex4_A 158 HLTD--------------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAG--LSLLA 221 (241)
T ss_dssp GSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTT--CCEEE
T ss_pred hCCH--------------HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcC--CeEEE
Confidence 1111 12367899999999999999998754321 114666778888875 44444
Q ss_pred C
Q 007036 151 V 151 (620)
Q Consensus 151 ~ 151 (620)
+
T Consensus 222 ~ 222 (241)
T 2ex4_A 222 E 222 (241)
T ss_dssp E
T ss_pred e
Confidence 3
No 126
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.68 E-value=0.034 Score=55.86 Aligned_cols=87 Identities=13% Similarity=0.133 Sum_probs=64.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC---CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~---~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG 78 (620)
|++.|+++.-+.....++...+. .++.+...|+..+|. ...||.|+|-. +
T Consensus 107 v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~----------------------~~~fD~v~~~~-----~ 159 (299)
T 3g2m_A 107 VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL----------------------DKRFGTVVISS-----G 159 (299)
T ss_dssp EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC----------------------SCCEEEEEECH-----H
T ss_pred EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc----------------------CCCcCEEEECC-----c
Confidence 78999999999999988887764 689999999887652 25799998621 1
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 79 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 79 tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
++. -+.+ ..+.++|.++.++|||||+|+.++......
T Consensus 160 ~~~-------~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 160 SIN-------ELDE-------ADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp HHT-------TSCH-------HHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred ccc-------cCCH-------HHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 110 1111 234788999999999999999999887643
No 127
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.61 E-value=0.034 Score=52.09 Aligned_cols=84 Identities=8% Similarity=-0.013 Sum_probs=61.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+...+.++.+.+ .++.+...|+..+|. ....||.|++-.. +.
T Consensus 49 v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~ 100 (209)
T 2p8j_A 49 TYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPF---------------------KDESMSFVYSYGT------IF 100 (209)
T ss_dssp EEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCS---------------------CTTCEEEEEECSC------GG
T ss_pred EEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCC---------------------CCCceeEEEEcCh------HH
Confidence 7899999999999998888776 467777788876541 1256999997411 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.+. ..-..++|.++.++|||||+++.++.+..
T Consensus 101 -------~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 101 -------HMR-------KNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp -------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred -------hCC-------HHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 111 12246788999999999999999998864
No 128
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.60 E-value=0.023 Score=58.37 Aligned_cols=104 Identities=11% Similarity=0.046 Sum_probs=67.9
Q ss_pred EEEEcCChhHHHHHHHHHHHh-----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+|+.=+.+.+.++..+ ..+++.+...|+..+... ....||.|++|++...
T Consensus 110 V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--------------------~~~~fDvIi~D~~~p~ 169 (294)
T 3adn_A 110 ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--------------------TSQTFDVIISDCTDPI 169 (294)
T ss_dssp EEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--------------------CCCCEEEEEECC----
T ss_pred EEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--------------------cCCCccEEEECCCCcc
Confidence 789999999999999888775 356889999998765310 1257999999987311
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC--ChhccHHHHHHHHHhCC
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAVVAEILRKCE 143 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl--nP~ENEaVV~~~L~~~~ 143 (620)
.+. -+-.+.+.+..+.++|+|||++|..++|. .+..-..+++.+-+.++
T Consensus 170 --------------~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~ 220 (294)
T 3adn_A 170 --------------GPG----ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS 220 (294)
T ss_dssp ------------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCS
T ss_pred --------------Ccc----hhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCC
Confidence 111 01123568889999999999999887753 33444445544444443
No 129
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.57 E-value=0.12 Score=51.40 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=71.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|+|.|+++.-+...+.|+++.|..+ +.+...|+.. ++. ...||.|++ .|.|
T Consensus 42 V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~----------------------~~~~D~Ivi----aG~G- 94 (225)
T 3kr9_A 42 AIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE----------------------TDQVSVITI----AGMG- 94 (225)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG----------------------GGCCCEEEE----EEEC-
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc----------------------CcCCCEEEE----cCCC-
Confidence 7999999999999999999999874 8888888732 210 125998885 2322
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEee
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd 150 (620)
..+=.+||..+...|++||++|.+.- .....|...|.+++ |.+++
T Consensus 95 -------------------g~~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~G--f~i~~ 139 (225)
T 3kr9_A 95 -------------------GRLIARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDHG--FQIVA 139 (225)
T ss_dssp -------------------HHHHHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHTT--EEEEE
T ss_pred -------------------hHHHHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHCC--CEEEE
Confidence 12236789999999999999999665 36777788888875 55554
No 130
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.57 E-value=0.021 Score=53.47 Aligned_cols=95 Identities=18% Similarity=0.109 Sum_probs=64.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+...+.++.. .+++.+...|+..++. ....||.|++..+.... ..
T Consensus 68 v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~---------------------~~~~fD~v~~~~~~~~~--~~ 122 (215)
T 2pxx_A 68 VTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDF---------------------PSASFDVVLEKGTLDAL--LA 122 (215)
T ss_dssp EEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCS---------------------CSSCEEEEEEESHHHHH--TT
T ss_pred EEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCC---------------------CCCcccEEEECcchhhh--cc
Confidence 78999999999888877654 3577888888876541 12569999987553221 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.++. .|.... .-.....++|..+.++|||||+++.++.+.
T Consensus 123 ~~~~---~~~~~~--~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 123 GERD---PWTVSS--EGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TCSC---TTSCCH--HHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccc---cccccc--chhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 1222 233221 122345789999999999999999999775
No 131
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=95.53 E-value=0.064 Score=57.69 Aligned_cols=58 Identities=14% Similarity=0.025 Sum_probs=46.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCC-CccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPG-CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~-~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|+|.|+++.-+...++++++.|..|+.+...|+..+.. + ......||.|++|+|.+|.
T Consensus 311 V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~------------------~~~~~~fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 311 VVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ------------------PWAKNGFDKVLLDPARAGA 369 (433)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS------------------GGGTTCCSEEEECCCTTCC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh------------------hhhcCCCCEEEECCCCccH
Confidence 79999999999999999999999999999999876321 1 0112469999999998764
No 132
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.52 E-value=0.047 Score=53.99 Aligned_cols=87 Identities=10% Similarity=-0.009 Sum_probs=63.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+.....++...+. .++.+...|+..+|.. ....||.|++.-. +
T Consensus 90 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--------------------~~~~fD~v~~~~~------l 143 (298)
T 1ri5_A 90 YYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD--------------------LGKEFDVISSQFS------F 143 (298)
T ss_dssp EEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC--------------------CSSCEEEEEEESC------G
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC--------------------CCCCcCEEEECch------h
Confidence 78999999999999998888776 5788888888765420 1257999998721 1
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.. .+ .-......+|.++.++|||||+++.+++..
T Consensus 144 ~~------~~------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 144 HY------AF------STSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp GG------GG------SSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hh------hc------CCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 00 00 011234678999999999999999999764
No 133
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.51 E-value=0.015 Score=55.91 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=56.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++...+ ++.+...|+..... ....||.|+++.++...
T Consensus 95 v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~---------------------~~~~fD~v~~~~~~~~~---- 147 (231)
T 1vbf_A 95 VVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE---------------------EEKPYDRVVVWATAPTL---- 147 (231)
T ss_dssp EEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG---------------------GGCCEEEEEESSBBSSC----
T ss_pred EEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc---------------------cCCCccEEEECCcHHHH----
Confidence 7899999999999998888777 88888888765210 12569999998765321
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+ ..+.++|||||+++.++.+-
T Consensus 148 ----------~--------------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 148 ----------L--------------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp ----------C--------------HHHHHTEEEEEEEEEEECSS
T ss_pred ----------H--------------HHHHHHcCCCcEEEEEEcCC
Confidence 0 24678999999999998754
No 134
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.50 E-value=0.014 Score=57.29 Aligned_cols=85 Identities=18% Similarity=0.109 Sum_probs=60.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+..++++.++.+ .++.+...|+..+.. ......||.|++|+.-+.....+
T Consensus 86 v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~-------------------~~~~~~FD~i~~D~~~~~~~~~~ 145 (236)
T 3orh_A 86 HWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAP-------------------TLPDGHFDGILYDTYPLSEETWH 145 (236)
T ss_dssp EEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGG-------------------GSCTTCEEEEEECCCCCBGGGTT
T ss_pred EEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhcc-------------------cccccCCceEEEeeeecccchhh
Confidence 6789999998888887777665 467788888765421 11126799999997654433211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
......+|..+.++|||||+++|.+
T Consensus 146 -----------------~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 146 -----------------THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -----------------THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -----------------hcchhhhhhhhhheeCCCCEEEEEe
Confidence 1123567888999999999999865
No 135
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.45 E-value=0.098 Score=50.77 Aligned_cols=78 Identities=15% Similarity=0.139 Sum_probs=55.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....++ ...++.+...|+..+|. ....||.|++-- ++.
T Consensus 70 v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 119 (253)
T 3g5l_A 70 VLGIDLSERMLTEAKRKT---TSPVVCYEQKAIEDIAI---------------------EPDAYNVVLSSL------ALH 119 (253)
T ss_dssp EEEEESCHHHHHHHHHHC---CCTTEEEEECCGGGCCC---------------------CTTCEEEEEEES------CGG
T ss_pred EEEEECCHHHHHHHHHhh---ccCCeEEEEcchhhCCC---------------------CCCCeEEEEEch------hhh
Confidence 789999987776665443 36788889888877652 125799999842 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
.-++ ..++|..+.++|||||+++.++.+
T Consensus 120 ~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 120 YIAS----------------FDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp GCSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhh----------------HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 1111 257899999999999999998653
No 136
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=95.42 E-value=0.053 Score=52.42 Aligned_cols=99 Identities=7% Similarity=-0.094 Sum_probs=65.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+....+++... .++.+...|+..++. ....||.|++-- ++.
T Consensus 119 v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 169 (254)
T 1xtp_A 119 TDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL---------------------PPNTYDLIVIQW------TAI 169 (254)
T ss_dssp EEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC---------------------CSSCEEEEEEES------CGG
T ss_pred EEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC---------------------CCCCeEEEEEcc------hhh
Confidence 789999998888877766544 678888888876541 125799999721 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh------------ccHHHHHHHHHhCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV------------ENEAVVAEILRKCE 143 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~------------ENEaVV~~~L~~~~ 143 (620)
.+.. .-..++|.++.++|||||+++.++...... -..+-+..+|++.+
T Consensus 170 -------~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 229 (254)
T 1xtp_A 170 -------YLTD-------ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESG 229 (254)
T ss_dssp -------GSCH-------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHT
T ss_pred -------hCCH-------HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCC
Confidence 1111 124788999999999999999998532211 13455666676654
No 137
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.41 E-value=0.031 Score=55.60 Aligned_cols=84 Identities=19% Similarity=0.156 Sum_probs=63.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+.....+++..|. +++.+...|+..++.. ....||.|++.. ++
T Consensus 93 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--------------------~~~~fD~v~~~~------~l 146 (285)
T 4htf_A 93 VILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH--------------------LETPVDLILFHA------VL 146 (285)
T ss_dssp EEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG--------------------CSSCEEEEEEES------CG
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh--------------------cCCCceEEEECc------hh
Confidence 78999999999999999998888 6899999998776521 126799999852 22
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
..-++ ...+|..+.++|||||+++.++.+..
T Consensus 147 ~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 147 EWVAD----------------PRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp GGCSC----------------HHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred hcccC----------------HHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 11111 14689999999999999999887543
No 138
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.40 E-value=0.057 Score=52.78 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=61.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++++.+.+++.+...|+..+|. ....||.|++-.. +.
T Consensus 62 v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~---------------------~~~~fD~V~~~~~------l~ 114 (260)
T 1vl5_A 62 VVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF---------------------TDERFHIVTCRIA------AH 114 (260)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS---------------------CTTCEEEEEEESC------GG
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC---------------------CCCCEEEEEEhhh------hH
Confidence 78999999999999999999998899999999877652 1257999997521 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
.| + + ...+|.++.++|||||+++.++..
T Consensus 115 -------~~-~-d-------~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 115 -------HF-P-N-------PASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp -------GC-S-C-------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------hc-C-C-------HHHHHHHHHHHcCCCCEEEEEEcC
Confidence 11 1 1 137889999999999999987543
No 139
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.40 E-value=0.014 Score=59.15 Aligned_cols=87 Identities=15% Similarity=0.081 Sum_probs=63.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhC----CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC----TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg----~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...++++..++ .+++.+...|+..+.. .....||.|++|++.. .
T Consensus 105 v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------------------~~~~~fD~Ii~d~~~~-~ 163 (283)
T 2i7c_A 105 IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE--------------------NVTNTYDVIIVDSSDP-I 163 (283)
T ss_dssp EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH--------------------HCCSCEEEEEEECCCT-T
T ss_pred EEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH--------------------hCCCCceEEEEcCCCC-C
Confidence 7899999999999888776653 5789999888865421 0125799999997632 1
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
| +. .. -.+.+++..+.++|+|||++|..++|.
T Consensus 164 ~-------------~~--~~--l~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 164 G-------------PA--ET--LFNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp T-------------GG--GG--GSSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred C-------------cc--hh--hhHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 1 10 01 123678899999999999999988763
No 140
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.40 E-value=0.042 Score=53.26 Aligned_cols=83 Identities=10% Similarity=0.069 Sum_probs=58.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++... +++.+...|+..+|. ....||.|++-. ++.
T Consensus 81 v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 131 (266)
T 3ujc_A 81 THGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF---------------------PENNFDLIYSRD------AIL 131 (266)
T ss_dssp EEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC---------------------CTTCEEEEEEES------CGG
T ss_pred EEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC---------------------CCCcEEEEeHHH------HHH
Confidence 789999998887776655444 788899999877642 125799999741 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.+.+ .-...+|..+.++|||||+++.++.+..
T Consensus 132 -------~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 132 -------ALSL-------ENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp -------GSCH-------HHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred -------hcCh-------HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 1111 2236789999999999999999986543
No 141
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.36 E-value=0.033 Score=56.32 Aligned_cols=86 Identities=15% Similarity=0.073 Sum_probs=61.6
Q ss_pred EEEEcCChhHHHHHHHHHHHh----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.=+...+.++..+ ..+++.+...|+..+-. .....||.|++|+|.. .
T Consensus 102 v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~--------------------~~~~~fD~Ii~d~~~~-~ 160 (275)
T 1iy9_A 102 ATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA--------------------KSENQYDVIMVDSTEP-V 160 (275)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH--------------------TCCSCEEEEEESCSSC-C
T ss_pred EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh--------------------hCCCCeeEEEECCCCC-C
Confidence 789999999999988887654 34789999999865310 0125799999998742 2
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
+ | +. .| ...+++..+.+.|++||++|..+.+
T Consensus 161 ~-----~-------~~---~l--~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 161 G-----P-------AV---NL--FTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp S-----C-------CC---CC--STTHHHHHHHHHEEEEEEEEEECCC
T ss_pred C-----c-------ch---hh--hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2 1 00 11 1246788889999999999998766
No 142
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.33 E-value=0.086 Score=49.28 Aligned_cols=102 Identities=10% Similarity=0.031 Sum_probs=68.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....+ .+++.+...|+..+|. ....||.|++.. ++.
T Consensus 66 v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 113 (203)
T 3h2b_A 66 IEGLEPATRLVELARQT-----HPSVTFHHGTITDLSD---------------------SPKRWAGLLAWY------SLI 113 (203)
T ss_dssp EEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGG---------------------SCCCEEEEEEES------SST
T ss_pred EEEEeCCHHHHHHHHHh-----CCCCeEEeCccccccc---------------------CCCCeEEEEehh------hHh
Confidence 78999998777665544 3577788888866541 126799999842 221
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh------------hccHHHHHHHHHhCCCceEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP------------VENEAVVAEILRKCEGSVELV 149 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP------------~ENEaVV~~~L~~~~~~~eLv 149 (620)
. +...+ ...+|.++.++|||||+++.++..... .-...-+..+|++.+ ++++
T Consensus 114 ~-------~~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~ 177 (203)
T 3h2b_A 114 H-------MGPGE-------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAG--FQVT 177 (203)
T ss_dssp T-------CCTTT-------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTT--EEEE
T ss_pred c-------CCHHH-------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCC--CcEE
Confidence 1 11111 367889999999999999999876543 123556677777765 6666
Q ss_pred eC
Q 007036 150 DV 151 (620)
Q Consensus 150 d~ 151 (620)
.+
T Consensus 178 ~~ 179 (203)
T 3h2b_A 178 SS 179 (203)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 143
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.28 E-value=0.037 Score=53.70 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=55.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+...+.++++.|..++.+...|+.. +. .....||.|+++.++..
T Consensus 117 v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~--------------------~~~~~fD~Ii~~~~~~~----- 170 (235)
T 1jg1_A 117 VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-GF--------------------PPKAPYDVIIVTAGAPK----- 170 (235)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CC--------------------GGGCCEEEEEECSBBSS-----
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-CC--------------------CCCCCccEEEECCcHHH-----
Confidence 78999999999999999999999898888888721 10 01135999999865421
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
+ + ..+.++|||||+||.++-
T Consensus 171 ----~-----~--------------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 171 ----I-----P--------------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp ----C-----C--------------HHHHHTEEEEEEEEEEEC
T ss_pred ----H-----H--------------HHHHHhcCCCcEEEEEEe
Confidence 1 0 146789999999998764
No 144
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.23 E-value=0.044 Score=55.40 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=63.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+.....++.+.|..+ +.+...|+..+|. . ..||.|++..+ +
T Consensus 146 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~-~~fD~v~~~~~------~ 197 (305)
T 3ocj_A 146 LVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT---------------------R-EGYDLLTSNGL------N 197 (305)
T ss_dssp EEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC---------------------C-SCEEEEECCSS------G
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc---------------------c-CCeEEEEECCh------h
Confidence 7899999999999999999888765 8899999877642 1 56999996422 2
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
..-|+. ..+.++|..+.++|||||+++.++.+.
T Consensus 198 ~~~~~~-------------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 198 IYEPDD-------------ARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp GGCCCH-------------HHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred hhcCCH-------------HHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 211111 224568999999999999999977554
No 145
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=95.21 E-value=0.04 Score=53.34 Aligned_cols=77 Identities=21% Similarity=0.145 Sum_probs=54.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++..+..+..++++. +|+.+...|+..... .. ... ..||.|++|++-
T Consensus 101 v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~-~~----------------~~~-~~~D~v~~~~~~------- 153 (230)
T 1fbn_A 101 VYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQE-YA----------------NIV-EKVDVIYEDVAQ------- 153 (230)
T ss_dssp EEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGG-GT----------------TTS-CCEEEEEECCCS-------
T ss_pred EEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCccc-cc----------------ccC-ccEEEEEEecCC-------
Confidence 789999999999988887655 788888888865110 00 011 469999966531
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
|+ .-..+|..+.++|||||+++.+
T Consensus 154 --~~---------------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 154 --PN---------------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp --TT---------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hh---------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 11 1244588899999999999887
No 146
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.19 E-value=0.0095 Score=61.49 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=39.2
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccH--HHHHHHHH
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE--AVVAEILR 140 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENE--aVV~~~L~ 140 (620)
..||.|+||.+|+ .|.. ... +..+..+|..+.++|||||.+|- +.+.+.+.+ ..+..+..
T Consensus 147 ~~fD~V~sd~~~~-~g~~----------~~d-----~~~~l~~L~~~~~~LkpGG~~v~--kv~~~~~~~~~~~l~~l~~ 208 (305)
T 2p41_A 147 ERCDTLLCDIGES-SPNP----------TVE-----AGRTLRVLNLVENWLSNNTQFCV--KVLNPYMSSVIEKMEALQR 208 (305)
T ss_dssp CCCSEEEECCCCC-CSSH----------HHH-----HHHHHHHHHHHHHHCCTTCEEEE--EESCCCSHHHHHHHHHHHH
T ss_pred CCCCEEEECCccc-cCcc----------hhh-----HHHHHHHHHHHHHHhCCCCEEEE--EeCCCCCchHHHHHHHHHH
Confidence 4799999999997 5531 111 11122578888899999998886 345553332 44555444
Q ss_pred hCC
Q 007036 141 KCE 143 (620)
Q Consensus 141 ~~~ 143 (620)
.+.
T Consensus 209 ~f~ 211 (305)
T 2p41_A 209 KHG 211 (305)
T ss_dssp HHC
T ss_pred HcC
Confidence 443
No 147
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.18 E-value=0.043 Score=52.57 Aligned_cols=83 Identities=10% Similarity=0.116 Sum_probs=60.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++...+ ++.+...|+..++. ...||.|++... +.
T Consensus 71 v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~----------------------~~~fD~v~~~~~------l~ 120 (234)
T 3dtn_A 71 FTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDF----------------------EEKYDMVVSALS------IH 120 (234)
T ss_dssp EEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCC----------------------CSCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCC----------------------CCCceEEEEeCc------cc
Confidence 6899999988888777665554 88888888877652 156999998532 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.+.. .....+|.++.++|||||+++.++.....
T Consensus 121 -------~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 121 -------HLED-------EDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp -------GSCH-------HHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred -------cCCH-------HHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 1111 11257899999999999999999877654
No 148
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.15 E-value=0.024 Score=58.72 Aligned_cols=99 Identities=12% Similarity=0.035 Sum_probs=67.3
Q ss_pred EEEEcCChhHHHHHHHHHHHh----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...++++.++ ..+++.+...|+..+.. .....||.|++|++..
T Consensus 143 v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~--------------------~~~~~fDvIi~d~~~p-- 200 (321)
T 2pt6_A 143 IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE--------------------NVTNTYDVIIVDSSDP-- 200 (321)
T ss_dssp EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH--------------------HCCSCEEEEEEECCCS--
T ss_pred EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh--------------------hcCCCceEEEECCcCC--
Confidence 789999999999998887663 24688899888865311 0125799999997521
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC--CChhccHHHHHHH
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVVAEI 138 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS--lnP~ENEaVV~~~ 138 (620)
|.+. . +-.+.+++..+.++|+|||+++..+.| +.+.+-..+++.+
T Consensus 201 ------------~~~~--~--~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 247 (321)
T 2pt6_A 201 ------------IGPA--E--TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYA 247 (321)
T ss_dssp ------------SSGG--G--GGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHH
T ss_pred ------------CCcc--h--hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 1111 0 112378899999999999999997655 3444444444443
No 149
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=95.14 E-value=0.02 Score=63.69 Aligned_cols=112 Identities=12% Similarity=0.008 Sum_probs=72.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-----EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-----LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-----v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+++.-+.+.+.++...|..+ +.+.+.|+...+. .....||.|++++|.++
T Consensus 214 i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~--------------------~~~~~fD~Vv~NPPf~~ 273 (541)
T 2ar0_A 214 FIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDG--------------------ENLPKAHIVATNPPFGS 273 (541)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHH--------------------HTSCCEEEEEECCCCTT
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCccccc--------------------ccccCCeEEEECCCccc
Confidence 7899999999988888887777664 5666666643210 01257999999999998
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC--CChhccHHHH-HHHHHh
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVV-AEILRK 141 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS--lnP~ENEaVV-~~~L~~ 141 (620)
........+ +.. .-...+...|.+++.+||+||++++.+.. |..-..+.-+ .++++.
T Consensus 274 ~~~~~~~~~----~~~----~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~ 333 (541)
T 2ar0_A 274 AAGTNITRT----FVH----PTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDK 333 (541)
T ss_dssp CSSCCCCSC----CSS----CCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHH
T ss_pred ccchhhHhh----cCC----CCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhc
Confidence 754431111 111 11234567899999999999999988652 2222223344 555554
No 150
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.10 E-value=0.04 Score=51.18 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=42.7
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
..||.|++|.++...|. |.. +......++..+|..+.++|||||++|.+++.- .+.+.+ ...++.
T Consensus 96 ~~fD~V~~~~~~~~~~~----------~~~-~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--~~~~~~-~~~l~~ 160 (196)
T 2nyu_A 96 RRADVILSDMAPNATGF----------RDL-DHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG--SQSRRL-QRRLTE 160 (196)
T ss_dssp GCEEEEEECCCCCCCSC----------HHH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS--GGGHHH-HHHHHH
T ss_pred CCCcEEEeCCCCCCCCC----------ccc-CHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC--ccHHHH-HHHHHH
Confidence 47999999986554442 111 112334566789999999999999999987643 333444 444444
No 151
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=95.07 E-value=0.063 Score=53.35 Aligned_cols=78 Identities=15% Similarity=0.021 Sum_probs=60.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....++.+.+. ++.+...|+..++. ...||.|++..+..-
T Consensus 145 v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----------------------~~~fD~i~~~~~~~~----- 196 (286)
T 3m70_A 145 VTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI----------------------QENYDFIVSTVVFMF----- 196 (286)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC----------------------CSCEEEEEECSSGGG-----
T ss_pred EEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc----------------------cCCccEEEEccchhh-----
Confidence 78999999999999999999888 88999888877542 267999998664220
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
+.+ .....+|.++.++|||||+++..
T Consensus 197 --------~~~-------~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 197 --------LNR-------ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp --------SCG-------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred --------CCH-------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 111 12356899999999999997664
No 152
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.07 E-value=0.074 Score=52.34 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=61.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++...+.+++.+...|+..+|. ....||.|++... +.
T Consensus 64 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~ 116 (276)
T 3mgg_A 64 ITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF---------------------EDSSFDHIFVCFV------LE 116 (276)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS---------------------CTTCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC---------------------CCCCeeEEEEech------hh
Confidence 78999999999999999999999999999999877652 1257999997421 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
.-++. ..+|..+.++|||||+++..+
T Consensus 117 ~~~~~----------------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 117 HLQSP----------------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GCSCH----------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCH----------------HHHHHHHHHHcCCCcEEEEEE
Confidence 11110 367889999999999999976
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=95.04 E-value=0.062 Score=55.68 Aligned_cols=87 Identities=11% Similarity=0.065 Sum_probs=64.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+...+.++...+.. +.+...|+..++ ...||.|+++.|..- |.
T Consensus 223 v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~-----------------------~~~fD~Iv~~~~~~~-g~-- 275 (343)
T 2pjd_A 223 LTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV-----------------------KGRFDMIISNPPFHD-GM-- 275 (343)
T ss_dssp CEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC-----------------------CSCEEEEEECCCCCS-SS--
T ss_pred EEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc-----------------------cCCeeEEEECCCccc-Cc--
Confidence 689999999999999999888765 445566654322 156999999988531 10
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
.+ -.....++|..+.++|||||+++..+.+..+.
T Consensus 276 -------~~-------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 276 -------QT-------SLDAAQTLIRGAVRHLNSGGELRIVANAFLPY 309 (343)
T ss_dssp -------HH-------HHHHHHHHHHHHGGGEEEEEEEEEEEETTSSH
T ss_pred -------cC-------CHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCc
Confidence 00 11235688999999999999999999988774
No 154
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=95.01 E-value=0.087 Score=49.79 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=57.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++. .++.+...|+..+|. . ..||.|++.. ++.
T Consensus 70 v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~---------------------~-~~fD~v~~~~------~l~ 117 (220)
T 3hnr_A 70 VYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV---------------------P-TSIDTIVSTY------AFH 117 (220)
T ss_dssp EEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC---------------------C-SCCSEEEEES------CGG
T ss_pred EEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC---------------------C-CCeEEEEECc------chh
Confidence 6899999887766655433 577788888877642 1 5799999852 221
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhcc
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 131 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~EN 131 (620)
.-++ ..+..+|..+.++|||||+++.++..+...+.
T Consensus 118 ~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 153 (220)
T 3hnr_A 118 HLTD--------------DEKNVAIAKYSQLLNKGGKIVFADTIFADQDA 153 (220)
T ss_dssp GSCH--------------HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHH
T ss_pred cCCh--------------HHHHHHHHHHHHhcCCCCEEEEEeccccChHH
Confidence 1111 11256899999999999999999866654443
No 155
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.96 E-value=0.036 Score=57.01 Aligned_cols=87 Identities=14% Similarity=0.076 Sum_probs=60.6
Q ss_pred EEEEcCChhHHHHHHHHHHHh----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...+.++..+ ..+++.+...|+..+.. .....||.|++|++...
T Consensus 122 v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~--------------------~~~~~fD~Ii~d~~~~~- 180 (304)
T 2o07_A 122 VVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK--------------------QNQDAFDVIITDSSDPM- 180 (304)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH--------------------TCSSCEEEEEEECC----
T ss_pred EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh--------------------hCCCCceEEEECCCCCC-
Confidence 789999999999999888763 35789999998865311 01257999999987311
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.+. .+..+.+++..+.++|+|||++|..+.+.
T Consensus 181 -------------~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 181 -------------GPA----ESLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp -------------------------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -------------Ccc----hhhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 110 11234678899999999999999888553
No 156
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=94.92 E-value=0.099 Score=51.23 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=61.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|++..-+.....++...|.. ++.+...|+..+|. ....||.|++- +++
T Consensus 87 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~------~~l 139 (273)
T 3bus_A 87 VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF---------------------EDASFDAVWAL------ESL 139 (273)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---------------------CTTCEEEEEEE------SCT
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC---------------------CCCCccEEEEe------chh
Confidence 789999999999999999988865 68888888877652 12579999972 122
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
..-++ ...+|.++.++|||||+++.++...
T Consensus 140 ~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 140 HHMPD----------------RGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TTSSC----------------HHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred hhCCC----------------HHHHHHHHHHHcCCCeEEEEEEeec
Confidence 11111 1478999999999999999988654
No 157
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=94.86 E-value=0.048 Score=51.21 Aligned_cols=92 Identities=10% Similarity=0.040 Sum_probs=61.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+...+.++. ++.+...|+..+| ..||.|++|+|-.-
T Consensus 77 v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~------------------------~~~D~v~~~~p~~~----- 122 (200)
T 1ne2_A 77 VTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS------------------------GKYDTWIMNPPFGS----- 122 (200)
T ss_dssp EEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC------------------------CCEEEEEECCCC-------
T ss_pred EEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC------------------------CCeeEEEECCCchh-----
Confidence 7899999998888887765 6677777776543 45999999988421
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd 150 (620)
|.. .....+|.++++.+ | ++|+.|+ | ...+.+..++...+ .++.+.
T Consensus 123 --------~~~-------~~~~~~l~~~~~~~--g--~~~~~~~--~-~~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 123 --------VVK-------HSDRAFIDKAFETS--M--WIYSIGN--A-KARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp --------------------CHHHHHHHHHHE--E--EEEEEEE--G-GGHHHHHHHHHHHE-EEEEEE
T ss_pred --------ccC-------chhHHHHHHHHHhc--C--cEEEEEc--C-chHHHHHHHHHHCC-CEEEEE
Confidence 111 11246788888887 3 3888884 3 44566777777766 665543
No 158
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.85 E-value=0.028 Score=54.72 Aligned_cols=94 Identities=15% Similarity=0.049 Sum_probs=61.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCC-CCCccCCCCCcCCCcCccccccccc--CCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQ--LLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~-p~~~~~~~~~~~~~~g~~~~~~~~~--~~FDrILlDvPCSGd 77 (620)
|++.|+++..+...+.++++.|..+ +.+...|+..+ +.+...... ......... ..||.|++|..
T Consensus 88 v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~-------~~~~~~f~~~~~~fD~I~~~~~---- 156 (239)
T 2hnk_A 88 ILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSA-------PSWASDFAFGPSSIDLFFLDAD---- 156 (239)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSC-------CGGGTTTCCSTTCEEEEEECSC----
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccc-------ccccccccCCCCCcCEEEEeCC----
Confidence 7899999999999999999999865 88888887542 110000000 000000111 56999999842
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
... ...+|..+.++|++||+||..++...
T Consensus 157 --------------~~~-------~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 157 --------------KEN-------YPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp --------------GGG-------HHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred --------------HHH-------HHHHHHHHHHHcCCCeEEEEEccccC
Confidence 000 12568899999999999999886553
No 159
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=94.82 E-value=0.15 Score=48.88 Aligned_cols=81 Identities=10% Similarity=0.059 Sum_probs=56.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....+ ....++.+...|+..+|. ....||.|++- +++.
T Consensus 78 v~~vD~s~~~~~~a~~~---~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~------~~l~ 127 (242)
T 3l8d_A 78 AVGVDISEVMIQKGKER---GEGPDLSFIKGDLSSLPF---------------------ENEQFEAIMAI------NSLE 127 (242)
T ss_dssp EEEEESCHHHHHHHHTT---TCBTTEEEEECBTTBCSS---------------------CTTCEEEEEEE------SCTT
T ss_pred EEEEECCHHHHHHHHhh---cccCCceEEEcchhcCCC---------------------CCCCccEEEEc------ChHh
Confidence 68999998776665544 355788888888877642 12679999973 2222
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.-++ ..++|..+.++|||||+++.++.....
T Consensus 128 ~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 128 WTEE----------------PLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp SSSC----------------HHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred hccC----------------HHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 1111 147799999999999999999865443
No 160
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=94.82 E-value=0.098 Score=50.05 Aligned_cols=83 Identities=13% Similarity=0.085 Sum_probs=59.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++...+ .++.+...|+..++. ...||.|++...+ +.
T Consensus 57 v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~----------------------~~~fD~v~~~~~~-----~~ 108 (243)
T 3d2l_A 57 VTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL----------------------PEPVDAITILCDS-----LN 108 (243)
T ss_dssp EEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC----------------------SSCEEEEEECTTG-----GG
T ss_pred EEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC----------------------CCCcCEEEEeCCc-----hh
Confidence 7899999999999999888877 567778888766541 1569999974211 10
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
.-+ + .....++|.++.++|||||+++.++.+
T Consensus 109 ~~~------~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 109 YLQ------T-------EADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp GCC------S-------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcC------C-------HHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 000 1 123367889999999999999987765
No 161
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=94.79 E-value=0.12 Score=52.23 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=62.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++..+.....++...|.. ++.+...|+..+| ..||.|++.- ++
T Consensus 116 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------------------~~fD~v~~~~------~l 165 (318)
T 2fk8_A 116 VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA------------------------EPVDRIVSIE------AF 165 (318)
T ss_dssp EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC------------------------CCCSEEEEES------CG
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC------------------------CCcCEEEEeC------hH
Confidence 789999999999999999888874 5888888775543 4599999752 12
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
..-+ . .-...+|..+.++|||||+++.++.....
T Consensus 166 ~~~~-------~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 166 EHFG-------H-------ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGTC-------G-------GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HhcC-------H-------HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 1111 1 12367889999999999999999988755
No 162
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=94.72 E-value=0.042 Score=58.50 Aligned_cols=118 Identities=15% Similarity=0.076 Sum_probs=75.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-----C---cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-----A---NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 73 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-----~---nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvP 73 (620)
|++.|+|+.-+.+.+.++..++. + ++.+...||..|..- .......||.|++|+|
T Consensus 214 Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~-----------------~~~~~~~fDvII~D~~ 276 (364)
T 2qfm_A 214 VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR-----------------YAKEGREFDYVINDLT 276 (364)
T ss_dssp EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH-----------------HHHHTCCEEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHh-----------------hhccCCCceEEEECCC
Confidence 78999999999999888765432 2 688999999775310 0001257999999986
Q ss_pred CccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEE
Q 007036 74 CSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVEL 148 (620)
Q Consensus 74 CSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eL 148 (620)
=...| . .+..+ .-...-..++..+.++|+|||.+|--+||.+..|--......|++.-..+..
T Consensus 277 d~P~~---~--------~p~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 277 AVPIS---T--------SPEED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp SSCCC---C--------C-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred CcccC---c--------Cchhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 31111 1 11111 1134455677777999999999999999988755555566556554334544
No 163
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=94.63 E-value=0.11 Score=51.76 Aligned_cols=82 Identities=11% Similarity=0.115 Sum_probs=61.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+....++++..|. .++.+...|+..+|. ....||.|++- +++
T Consensus 108 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~------~~l 160 (297)
T 2o57_A 108 IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC---------------------EDNSYDFIWSQ------DAF 160 (297)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS---------------------CTTCEEEEEEE------SCG
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC---------------------CCCCEeEEEec------chh
Confidence 78999999999999999988887 478898888877652 12569999963 111
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
..-++ ...+|..+.++|||||+++.++...
T Consensus 161 ~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 161 LHSPD----------------KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp GGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hhcCC----------------HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 11111 2578999999999999999998643
No 164
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=94.45 E-value=0.1 Score=54.33 Aligned_cols=95 Identities=11% Similarity=0.047 Sum_probs=67.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|.+. -+...++++++.|. .++.+...|+..++. ..+||.|++..+....
T Consensus 76 V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~----------------------~~~~D~Ivs~~~~~~~--- 129 (348)
T 2y1w_A 76 IYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL----------------------PEQVDIIISEPMGYML--- 129 (348)
T ss_dssp EEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC----------------------SSCEEEEEECCCBTTB---
T ss_pred EEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC----------------------CCceeEEEEeCchhcC---
Confidence 78999996 66777888888887 689999988876531 1469999987552211
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC--hhccHHHHHHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN--PVENEAVVAEIL 139 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln--P~ENEaVV~~~L 139 (620)
.... ....|.++.++|||||+++-+++++. |++.+..-.+.+
T Consensus 130 ----------~~~~-------~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~ 173 (348)
T 2y1w_A 130 ----------FNER-------MLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQF 173 (348)
T ss_dssp ----------TTTS-------HHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHH
T ss_pred ----------ChHH-------HHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhc
Confidence 1111 14456678899999999998888865 677666554444
No 165
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=94.36 E-value=0.043 Score=57.40 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=62.9
Q ss_pred EEEEcCChhHHHHHHHHHHHh--C--CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM--C--TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl--g--~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...+.++.++ + .+++.+...|+..+.. ......||.|++|++-
T Consensus 147 V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~-------------------~~~~~~fDlIi~d~~~--- 204 (334)
T 1xj5_A 147 IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK-------------------NAAEGSYDAVIVDSSD--- 204 (334)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH-------------------TSCTTCEEEEEECCCC---
T ss_pred EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH-------------------hccCCCccEEEECCCC---
Confidence 789999999999999988775 3 4689999998865410 0012569999999751
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
| |.+.. . -...+++..+.++|++||+||..+.+.
T Consensus 205 ------p-----~~~~~--~--l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 205 ------P-----IGPAK--E--LFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp ------T-----TSGGG--G--GGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred ------c-----cCcch--h--hhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 1 11111 1 124688999999999999999976554
No 166
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=94.31 E-value=0.12 Score=48.31 Aligned_cols=79 Identities=15% Similarity=0.060 Sum_probs=57.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+..... .+.+++.+...|+..+. ....||.|++.. ++.
T Consensus 71 v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~----------------------~~~~~D~v~~~~------~l~ 118 (218)
T 3ou2_A 71 VTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT----------------------PDRQWDAVFFAH------WLA 118 (218)
T ss_dssp EEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC----------------------CSSCEEEEEEES------CGG
T ss_pred EEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC----------------------CCCceeEEEEec------hhh
Confidence 6899999887776654 67788999999886641 126799999741 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.-++ .....+|..+.++|||||+++.++.+.
T Consensus 119 ~~~~--------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 119 HVPD--------------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp GSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCCH--------------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 1111 224678999999999999999999876
No 167
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=94.23 E-value=0.17 Score=56.39 Aligned_cols=129 Identities=15% Similarity=0.125 Sum_probs=77.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC--CcEEEEccccCCC--CCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT--ANLIVTNHEAQHF--PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~--~nv~vtn~Da~~~--p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+++.-+.+.+.++...|. .++.+.+.|+... |.. ....||.|+..||=++.
T Consensus 251 i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~--------------------~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 251 YFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQ--------------------EPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCS--------------------SCCCBSEEEECCCTTCC
T ss_pred EEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccc--------------------ccccccEEEecCCcCCc
Confidence 68999999999998888888887 5788888887654 211 12679999999999964
Q ss_pred cccccC--cc-cccccCcchhhhhHHHHHHHHHHHHhhcc-cCCEEEEeecC--CChhccHHHHHHHHHhCCCceEEeeC
Q 007036 78 GTLRKA--PD-IWRKWNVGLGNGLHSLQVQIAMRGISLLK-VGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 78 GtlrK~--pd-iw~~w~~~~~~~L~~lQ~~IL~rAl~lLk-~GG~LVYSTCS--lnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
...... .+ .|..+. ....-...+...+.+++.+|| +||++++.+=. |..---+.-+...|-+...-..++.+
T Consensus 311 ~~~~~~~~~d~rf~~~G--~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~~II~L 388 (542)
T 3lkd_A 311 WSASSGFMDDPRFSPFG--KLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAIDTVIGL 388 (542)
T ss_dssp CCCCGGGGGSTTTGGGS--SCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccchhhhhhhhhhhhh--hcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCceeEEEEc
Confidence 321110 01 122111 011122334568999999999 99998765532 22111244444444443222235554
Q ss_pred C
Q 007036 152 S 152 (620)
Q Consensus 152 ~ 152 (620)
+
T Consensus 389 P 389 (542)
T 3lkd_A 389 P 389 (542)
T ss_dssp C
T ss_pred c
Confidence 3
No 168
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.23 E-value=0.046 Score=56.27 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=62.5
Q ss_pred EEEEcCChhHHHHHHHHHHHh-----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|++.|+|+.-+...+.++..+ ..+++.+...|+..+.. .....||.|++|++...
T Consensus 104 v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~--------------------~~~~~fD~Ii~d~~~~~ 163 (314)
T 1uir_A 104 AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE--------------------RTEERYDVVIIDLTDPV 163 (314)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH--------------------HCCCCEEEEEEECCCCB
T ss_pred EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH--------------------hcCCCccEEEECCCCcc
Confidence 789999999999998888763 25789999999866410 01257999999976321
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+ . . .+ ...| ...+++..+.++|||||++|..+.+.
T Consensus 164 -~-~-~--------~~--~~~l--~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 164 -G-E-D--------NP--ARLL--YTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp -S-T-T--------CG--GGGG--SSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred -c-c-c--------Cc--chhc--cHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 0 0 0 11 1111 14678889999999999999876653
No 169
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=94.22 E-value=0.04 Score=56.69 Aligned_cols=66 Identities=12% Similarity=0.070 Sum_probs=39.9
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 142 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~ 142 (620)
..||.|++|.+++..|....+ .... ..+..++|..+.++|||||+++..+-.. ...+ -+.++|+++
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d----------~~~~-~~l~~~~l~~a~r~LkpGG~~v~~~~~~--~~~~-~l~~~l~~~ 187 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKE----------NDSK-EGFFTYLCGFIKQKLALGGSIAVKITEH--SWNA-DLYKLMGHF 187 (290)
T ss_dssp SCEEEEEECCCCCC---CCSC----------CCCC-CTHHHHHHHHHHHHEEEEEEEEEEECSS--SCCH-HHHHHHTTE
T ss_pred CcccEEEEcCCcccccccccc----------ccch-HHHHHHHHHHHHHhcCCCcEEEEEEecc--CCHH-HHHHHHHHc
Confidence 569999999877766543211 1111 2234689999999999999999865322 2223 344555543
No 170
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=93.97 E-value=0.24 Score=47.92 Aligned_cols=89 Identities=10% Similarity=0.075 Sum_probs=58.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+....++ .+++.+...|+..++ . ...||.|++... +
T Consensus 60 v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~---------------------~~~fD~v~~~~~------l- 105 (259)
T 2p35_A 60 ITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-P---------------------AQKADLLYANAV------F- 105 (259)
T ss_dssp EEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-C---------------------SSCEEEEEEESC------G-
T ss_pred EEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-c---------------------cCCcCEEEEeCc------h-
Confidence 78999999877776655 457778888887654 1 156999998421 1
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHH
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEIL 139 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L 139 (620)
.|-+ -...+|.++.++|||||+++.++..-........+..+.
T Consensus 106 -------~~~~--------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~ 148 (259)
T 2p35_A 106 -------QWVP--------DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETA 148 (259)
T ss_dssp -------GGST--------THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHH
T ss_pred -------hhCC--------CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHh
Confidence 1111 124688999999999999999986433222333444443
No 171
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=93.95 E-value=0.17 Score=49.50 Aligned_cols=106 Identities=12% Similarity=-0.030 Sum_probs=65.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC---CcEEEEccccCCCCCCccCCCCCcCCCcCccccc-------ccccCCccEEEEc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQHFPGCRANKNFSSASDKGIESES-------NMGQLLFDRVLCD 71 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~---~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~-------~~~~~~FDrILlD 71 (620)
|++.|.|..++.+.+.++++.|. .++.+...|+........+.+... ....+. ......||.|++|
T Consensus 54 VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~----~~~l~~~~~~i~~~~~~~~fDlIfID 129 (202)
T 3cvo_A 54 VTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAK----WRSYPDYPLAVWRTEGFRHPDVVLVD 129 (202)
T ss_dssp EEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTT----GGGTTHHHHGGGGCTTCCCCSEEEEC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchh----hhhHHHHhhhhhccccCCCCCEEEEe
Confidence 79999999999999999999994 578888888753200000000000 000000 0012579999999
Q ss_pred CCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHH
Q 007036 72 VPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILR 140 (620)
Q Consensus 72 vPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~ 140 (620)
+. |. ...+..++.+|++||+||.=-.+..+ ....|..+|.
T Consensus 130 g~--------k~-------------------~~~~~~~l~~l~~GG~Iv~DNv~~r~--~y~~v~~~~~ 169 (202)
T 3cvo_A 130 GR--------FR-------------------VGCALATAFSITRPVTLLFDDYSQRR--WQHQVEEFLG 169 (202)
T ss_dssp SS--------SH-------------------HHHHHHHHHHCSSCEEEEETTGGGCS--SGGGGHHHHC
T ss_pred CC--------Cc-------------------hhHHHHHHHhcCCCeEEEEeCCcCCc--chHHHHHHHh
Confidence 73 10 13345588999999999875544444 3355567764
No 172
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=93.90 E-value=0.14 Score=51.23 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=61.7
Q ss_pred EEEEcCChhHHHHHHHHHHHh--CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl--g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++.-+.....+++.. +..++.+...|+..++... + .......||.|++--.
T Consensus 64 v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~--------------~~~~~~~fD~V~~~~~------ 122 (299)
T 3g5t_A 64 IIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG-A--------------DSVDKQKIDMITAVEC------ 122 (299)
T ss_dssp EEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC-T--------------TTTTSSCEEEEEEESC------
T ss_pred EEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc-c--------------ccccCCCeeEEeHhhH------
Confidence 789999999999999998886 3578999999998765210 0 0011257999998421
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
+ .|- -..++|..+.++|||||+|+..+++
T Consensus 123 l--------~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 123 A--------HWF---------DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp G--------GGS---------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred H--------HHh---------CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 1 111 1257889999999999999986665
No 173
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=93.89 E-value=0.1 Score=54.23 Aligned_cols=92 Identities=10% Similarity=0.006 Sum_probs=63.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|++. -+...+.++++.|. .++.+...|+..++. ....||.|+++.....
T Consensus 90 v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------------------~~~~~D~Ivs~~~~~~---- 143 (340)
T 2fyt_A 90 VLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL---------------------PVEKVDVIISEWMGYF---- 143 (340)
T ss_dssp EEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC---------------------SCSCEEEEEECCCBTT----
T ss_pred EEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC---------------------CCCcEEEEEEcCchhh----
Confidence 78999996 78888888888887 689999998876541 1257999998742111
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC--ChhccHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAV 134 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl--nP~ENEaV 134 (620)
-.+ . .....+|..+.++|||||+++-+.|++ .+.++...
T Consensus 144 l~~--------~-------~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~ 184 (340)
T 2fyt_A 144 LLF--------E-------SMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNK 184 (340)
T ss_dssp BTT--------T-------CHHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHH
T ss_pred ccC--------H-------HHHHHHHHHHHhhcCCCcEEEcccceEEEEEecchhH
Confidence 000 0 112357888889999999999666654 34555544
No 174
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=93.80 E-value=0.15 Score=48.08 Aligned_cols=94 Identities=15% Similarity=-0.029 Sum_probs=61.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....++ ++.+...|+..++ ....||.|++.. ++.
T Consensus 68 v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~----------------------~~~~fD~v~~~~------~l~ 113 (211)
T 3e23_A 68 VDATDGSPELAAEASRRL------GRPVRTMLFHQLD----------------------AIDAYDAVWAHA------CLL 113 (211)
T ss_dssp EEEEESCHHHHHHHHHHH------TSCCEECCGGGCC----------------------CCSCEEEEEECS------CGG
T ss_pred EEEECCCHHHHHHHHHhc------CCceEEeeeccCC----------------------CCCcEEEEEecC------chh
Confidence 689999988777776655 3344556665544 126799999742 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhc-----------cHHHHHHHHHhCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE-----------NEAVVAEILRKCE 143 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~E-----------NEaVV~~~L~~~~ 143 (620)
. +.. .-...+|..+.++|||||+++.+++...... +.+-+..+|++.+
T Consensus 114 ~-------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 172 (211)
T 3e23_A 114 H-------VPR-------DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAG 172 (211)
T ss_dssp G-------SCH-------HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHC
T ss_pred h-------cCH-------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCC
Confidence 1 111 2336789999999999999999987655321 4556666676654
No 175
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=93.72 E-value=0.19 Score=50.18 Aligned_cols=79 Identities=13% Similarity=0.054 Sum_probs=60.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++...+. ++.+...|+..+|. ...||.|++... +.
T Consensus 50 v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~----------------------~~~fD~v~~~~~------l~ 100 (284)
T 3gu3_A 50 YTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL----------------------NDKYDIAICHAF------LL 100 (284)
T ss_dssp EEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC----------------------SSCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc----------------------CCCeeEEEECCh------hh
Confidence 78999999999999888887765 88899999877542 156999998542 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
.-++ ..++|.++.++|||||+++.....
T Consensus 101 ~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 HMTT----------------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GCSS----------------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCC----------------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 1111 137899999999999999987776
No 176
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.71 E-value=0.15 Score=47.97 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=54.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....++ +++.+...|+..+|. ....||.|++.. ++.
T Consensus 59 v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 106 (211)
T 2gs9_A 59 KVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPF---------------------PGESFDVVLLFT------TLE 106 (211)
T ss_dssp EEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCS---------------------CSSCEEEEEEES------CTT
T ss_pred EEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCC---------------------CCCcEEEEEEcC------hhh
Confidence 689999988777666554 567778888876541 125799999742 121
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.-++ ..++|..+.++|||||+++.++-.-.
T Consensus 107 ~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 107 FVED----------------VERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp TCSC----------------HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred hcCC----------------HHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 1111 24788999999999999999986543
No 177
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=93.71 E-value=0.075 Score=55.03 Aligned_cols=87 Identities=14% Similarity=-0.001 Sum_probs=58.8
Q ss_pred EEEEcCChhHHHHHHHHHHHh--C--CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM--C--TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl--g--~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...++++.++ + .+++.+...|+..+.. .....||.|++|++..
T Consensus 135 v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~--------------------~~~~~fD~Ii~d~~~~-- 192 (314)
T 2b2c_A 135 VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK--------------------NHKNEFDVIITDSSDP-- 192 (314)
T ss_dssp EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH--------------------HCTTCEEEEEECCC----
T ss_pred EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH--------------------hcCCCceEEEEcCCCC--
Confidence 789999999999888887665 2 4688999888865311 0125799999998621
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+.+. -+-.+.+++..+.++|+|||+||..+.+.
T Consensus 193 ------------~~~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 193 ------------VGPA----ESLFGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp ---------------------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred ------------CCcc----hhhhHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 1111 11123788999999999999999987654
No 178
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.69 E-value=0.24 Score=45.17 Aligned_cols=102 Identities=14% Similarity=0.000 Sum_probs=65.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++ +++.+...|+..++. ....||.|++..++-.
T Consensus 71 v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~---------------------~~~~~D~i~~~~~~~~----- 119 (195)
T 3cgg_A 71 VLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI---------------------SETDFDLIVSAGNVMG----- 119 (195)
T ss_dssp EEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC---------------------CCCCEEEEEECCCCGG-----
T ss_pred EEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC---------------------CCCceeEEEECCcHHh-----
Confidence 689999988887776654 356677777765431 1256999998633211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
.... .....+|.++.++|++||+++.++.+.... ...-+..+|.+.+ ++++.+
T Consensus 120 -------~~~~-------~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~-~~~~~~~~l~~~G--f~~~~~ 172 (195)
T 3cgg_A 120 -------FLAE-------DGREPALANIHRALGADGRAVIGFGAGRGW-VFGDFLEVAERVG--LELENA 172 (195)
T ss_dssp -------GSCH-------HHHHHHHHHHHHHEEEEEEEEEEEETTSSC-CHHHHHHHHHHHT--EEEEEE
T ss_pred -------hcCh-------HHHHHHHHHHHHHhCCCCEEEEEeCCCCCc-CHHHHHHHHHHcC--CEEeee
Confidence 1111 123788999999999999999987665432 3344556666654 555443
No 179
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.69 E-value=0.24 Score=47.80 Aligned_cols=80 Identities=15% Similarity=0.068 Sum_probs=58.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++...+. ++.+...|+..++. ...||.|+|.. +...
T Consensus 66 v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~----------------------~~~fD~v~~~~--~~~~--- 117 (252)
T 1wzn_A 66 VVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF----------------------KNEFDAVTMFF--STIM--- 117 (252)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC----------------------CSCEEEEEECS--SGGG---
T ss_pred EEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc----------------------CCCccEEEEcC--Cchh---
Confidence 78999999999999999888775 67788888876541 14699999621 1111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
.+. .....++|.++.++|||||++|..+
T Consensus 118 -------~~~-------~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 118 -------YFD-------EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp -------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------cCC-------HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 011 1234778999999999999999765
No 180
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=93.67 E-value=0.15 Score=53.16 Aligned_cols=85 Identities=9% Similarity=-0.023 Sum_probs=61.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|++ .-+.....++++.+..+ +.+...|+..++. ....||.|+++..-....
T Consensus 92 v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------------------~~~~fD~Iis~~~~~~l~-- 147 (349)
T 3q7e_A 92 VIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL---------------------PVEKVDIIISEWMGYCLF-- 147 (349)
T ss_dssp EEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC---------------------SSSCEEEEEECCCBBTBT--
T ss_pred EEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC---------------------CCCceEEEEEcccccccc--
Confidence 7899999 47888888888888776 8999999877641 126799999976422210
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
+. .....+|..+.++|||||+++.+.+++.
T Consensus 148 --~~---------------~~~~~~l~~~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 148 --YE---------------SMLNTVLHARDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp --BT---------------CCHHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred --Cc---------------hhHHHHHHHHHHhCCCCCEEccccceEE
Confidence 00 0123677778899999999997777653
No 181
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=93.60 E-value=0.088 Score=53.87 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=66.1
Q ss_pred EEEEcCChhHHHHHHHHHHHh----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...+.++..+ ..+++.+...|+..++.. .....||.|++|.+-..
T Consensus 122 v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-------------------~~~~~fDvIi~d~~~~~- 181 (304)
T 3bwc_A 122 CDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ-------------------TPDNTYDVVIIDTTDPA- 181 (304)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS-------------------SCTTCEEEEEEECC----
T ss_pred EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh-------------------ccCCceeEEEECCCCcc-
Confidence 789999999998888877543 457899999988765310 01257999999976311
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC-ChhccHHHHHHHHHhC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM-NPVENEAVVAEILRKC 142 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl-nP~ENEaVV~~~L~~~ 142 (620)
| + . .+-.+.+++..+.++|||||+++..+.+. ...+.-.-+...|++.
T Consensus 182 ------------~-~--~--~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 230 (304)
T 3bwc_A 182 ------------G-P--A--SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRET 230 (304)
T ss_dssp -----------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHH
T ss_pred ------------c-c--c--hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhC
Confidence 0 1 0 01124678899999999999999876542 2222333344445544
No 182
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=93.55 E-value=0.19 Score=48.66 Aligned_cols=77 Identities=17% Similarity=0.136 Sum_probs=55.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....++ ..+.+++.+...|+..+|. ....||.|++-. ++.
T Consensus 64 v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~ 115 (263)
T 2yqz_A 64 YIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPL---------------------PDESVHGVIVVH------LWH 115 (263)
T ss_dssp EEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCS---------------------CTTCEEEEEEES------CGG
T ss_pred EEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCC---------------------CCCCeeEEEECC------chh
Confidence 789999999888887776 4456789999998877651 125699999831 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
|-+ + ...+|.++.++|||||+++.+
T Consensus 116 --------~~~-~-------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 --------LVP-D-------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --------GCT-T-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred --------hcC-C-------HHHHHHHHHHHCCCCcEEEEE
Confidence 111 1 257889999999999999887
No 183
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=93.50 E-value=0.19 Score=47.86 Aligned_cols=81 Identities=10% Similarity=0.011 Sum_probs=54.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++ +++.+...|+..++. ...||.|+| +.+ ++.
T Consensus 65 v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----------------------~~~~D~v~~----~~~-~~~ 112 (239)
T 3bxo_A 65 TAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL----------------------GRKFSAVVS----MFS-SVG 112 (239)
T ss_dssp EEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC----------------------SSCEEEEEE----CTT-GGG
T ss_pred EEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc----------------------CCCCcEEEE----cCc-hHh
Confidence 789999988777666542 567777788766541 156999995 111 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.-+ ++ .-..++|.++.++|||||+++.+++...
T Consensus 113 ~~~------~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 113 YLK------TT-------EELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp GCC------SH-------HHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred hcC------CH-------HHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 110 11 2346789999999999999999987653
No 184
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=93.47 E-value=0.57 Score=46.61 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=72.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+++.-+...++|+++.|..+ +.+...|+..... ....||.|++ .|-|
T Consensus 48 V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~---------------------~~~~~D~Ivi----aGmG-- 100 (230)
T 3lec_A 48 AIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE---------------------EADNIDTITI----CGMG-- 100 (230)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---------------------GGGCCCEEEE----EEEC--
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc---------------------cccccCEEEE----eCCc--
Confidence 7999999999999999999999864 8898888754221 0136998875 2332
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEee
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd 150 (620)
..+=.+||..+...|+++|++|-|.- .++..|...|.+++ |++++
T Consensus 101 ------------------g~lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~~L~~~G--f~i~~ 145 (230)
T 3lec_A 101 ------------------GRLIADILNNDIDKLQHVKTLVLQPN-----NREDDLRKWLAAND--FEIVA 145 (230)
T ss_dssp ------------------HHHHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHTT--EEEEE
T ss_pred ------------------hHHHHHHHHHHHHHhCcCCEEEEECC-----CChHHHHHHHHHCC--CEEEE
Confidence 12336789999999999999998763 35777777888775 55554
No 185
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=93.44 E-value=0.11 Score=52.35 Aligned_cols=74 Identities=11% Similarity=-0.043 Sum_probs=53.7
Q ss_pred EEEEcCChhHHHHHHHHHHH----hCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKR----MCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kR----lg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+|+.-+...++++.+ +..+++.+...|+..+. ..||.|++|++
T Consensus 97 v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------------------------~~fD~Ii~d~~---- 148 (262)
T 2cmg_A 97 IDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------------------------KKYDLIFCLQE---- 148 (262)
T ss_dssp EEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------------------------CCEEEEEESSC----
T ss_pred EEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------------------------hhCCEEEECCC----
Confidence 68899998877766655432 33467888888886642 35999999942
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+|. . .+..+.++|+|||++|..+++.
T Consensus 149 -----dp~--------~----------~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 149 -----PDI--------H----------RIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp -----CCH--------H----------HHHHHHTTEEEEEEEEEEEECT
T ss_pred -----ChH--------H----------HHHHHHHhcCCCcEEEEEcCCc
Confidence 111 0 6778999999999999987664
No 186
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=93.40 E-value=0.17 Score=52.12 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=66.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|.+ .-+....++++..+.. ++.+...|+..++. ....||.|+++.+..+..
T Consensus 64 v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------------------~~~~~D~Ivs~~~~~~l~-- 119 (328)
T 1g6q_1 64 VIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL---------------------PFPKVDIIISEWMGYFLL-- 119 (328)
T ss_dssp EEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC---------------------SSSCEEEEEECCCBTTBS--
T ss_pred EEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC---------------------CCCcccEEEEeCchhhcc--
Confidence 7899999 5788888888888875 58888888876541 115799999986533210
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC--ChhccHHHHHHHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAVVAEILR 140 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl--nP~ENEaVV~~~L~ 140 (620)
+. .. ...+|..+.++|||||+++.++|++ .+.+........+.
T Consensus 120 --~~--------~~-------~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~ 164 (328)
T 1g6q_1 120 --YE--------SM-------MDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQYKDEKLN 164 (328)
T ss_dssp --TT--------CC-------HHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHHHHH
T ss_pred --cH--------HH-------HHHHHHHHHhhcCCCeEEEEeeceEEEEEecCchhhhhhhc
Confidence 00 01 1356777789999999999877775 35566554444443
No 187
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.28 E-value=0.15 Score=53.80 Aligned_cols=91 Identities=12% Similarity=0.002 Sum_probs=64.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|++ .-+.....+++..+..+ +.+...|+..++. ...||.|+++.......
T Consensus 89 V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------------------~~~~D~Iv~~~~~~~l~-- 143 (376)
T 3r0q_C 89 VYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL----------------------PEKVDVIISEWMGYFLL-- 143 (376)
T ss_dssp EEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC----------------------SSCEEEEEECCCBTTBT--
T ss_pred EEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc----------------------CCcceEEEEcChhhccc--
Confidence 7899999 88899999999988765 8899988877541 15799999975322110
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC--ChhccHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAV 134 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl--nP~ENEaV 134 (620)
+.. ....+|....++|||||+|+.+.+++ .|++++..
T Consensus 144 --~e~---------------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 182 (376)
T 3r0q_C 144 --RES---------------MFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIA 182 (376)
T ss_dssp --TTC---------------THHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHH
T ss_pred --chH---------------HHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHH
Confidence 110 12456777789999999999887764 45555543
No 188
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=93.12 E-value=0.15 Score=53.25 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=71.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+|+.-+...+.++.....+++.+...|+..+.. ......||.|++|++... +.
T Consensus 116 v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~-------------------~~~~~~fDvIi~D~~~~~-~~-- 173 (317)
T 3gjy_A 116 NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAE-------------------SFTPASRDVIIRDVFAGA-IT-- 173 (317)
T ss_dssp EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHH-------------------TCCTTCEEEEEECCSTTS-CC--
T ss_pred EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHh-------------------hccCCCCCEEEECCCCcc-cc--
Confidence 68899999877777766544345689999999876521 001257999999975431 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhc-cHHHHHHHHHhCCCceEEe
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE-NEAVVAEILRKCEGSVELV 149 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~E-NEaVV~~~L~~~~~~~eLv 149 (620)
|. . | ...+.+..+.++|++||++|..+.+-.+.+ -..+++.+-+.++ .+.++
T Consensus 174 --~~--------~---L--~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~ 226 (317)
T 3gjy_A 174 --PQ--------N---F--TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVI 226 (317)
T ss_dssp --CG--------G---G--SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEE
T ss_pred --ch--------h---h--hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEE
Confidence 11 0 1 125788899999999999998887644322 2345555555564 34444
No 189
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=93.09 E-value=0.32 Score=46.29 Aligned_cols=83 Identities=14% Similarity=0.097 Sum_probs=59.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++...+. ++.+...|+..++. ...||.|++.. + ++.
T Consensus 62 ~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----------------------~~~fD~v~~~~----~-~l~ 113 (246)
T 1y8c_A 62 TWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI----------------------NRKFDLITCCL----D-STN 113 (246)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC----------------------SCCEEEEEECT----T-GGG
T ss_pred EEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc----------------------cCCceEEEEcC----c-ccc
Confidence 68999999999999998888776 77788888766541 15699999732 0 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
.-+ ++ .-...+|.++.++|||||+++.++-+
T Consensus 114 ~~~------~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 114 YII------DS-------DDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GCC------SH-------HHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ccC------CH-------HHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 100 11 12467899999999999999986653
No 190
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.03 E-value=0.53 Score=44.51 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=54.2
Q ss_pred EEEEcCChhHHHHHHHHHH----HhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTK----RMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~k----Rlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|++...+..+..+++ +.+.+++.+...|+..+|.. ... |.|.+..+-...
T Consensus 54 v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~---------------------~~~-d~v~~~~~~~~~ 111 (218)
T 3mq2_A 54 VVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL---------------------SGV-GELHVLMPWGSL 111 (218)
T ss_dssp EEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC---------------------CCE-EEEEEESCCHHH
T ss_pred EEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC---------------------CCC-CEEEEEccchhh
Confidence 7899999998887655443 45677999999999886631 122 666644441100
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
......-+..+|..+.++|||||+++.+.
T Consensus 112 -----------------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 112 -----------------LRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -----------------HHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -----------------hhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 00000112578899999999999999854
No 191
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.98 E-value=0.26 Score=51.77 Aligned_cols=88 Identities=11% Similarity=0.129 Sum_probs=61.1
Q ss_pred EEEEcCChhHHHHHHHHHHHh-----C---CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-----C---TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 73 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-----g---~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvP 73 (620)
|++.|+++.-+.....++++. | .+++.+...|+..+..... .......||.|++..
T Consensus 111 v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~---------------~~~~~~~fD~V~~~~- 174 (383)
T 4fsd_A 111 VIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP---------------EGVPDSSVDIVISNC- 174 (383)
T ss_dssp EEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS---------------CCCCTTCEEEEEEES-
T ss_pred EEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc---------------CCCCCCCEEEEEEcc-
Confidence 789999999999988888765 3 3689999998876521100 001125799999862
Q ss_pred CccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 74 CSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 74 CSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
++..-++ ...+|.++.++|||||+|+.++-..
T Consensus 175 -----~l~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 175 -----VCNLSTN----------------KLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp -----CGGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -----chhcCCC----------------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2211111 1488999999999999999987543
No 192
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=92.92 E-value=0.16 Score=46.94 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=60.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.-+.. ..++.+...|+.. +. ....||.|++++|---..-
T Consensus 47 v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~---------------------~~~~fD~i~~n~~~~~~~~-- 93 (170)
T 3q87_B 47 VVSTDLNIRALES---------HRGGNLVRADLLC-SI---------------------NQESVDVVVFNPPYVPDTD-- 93 (170)
T ss_dssp EEEEESCHHHHHT---------CSSSCEEECSTTT-TB---------------------CGGGCSEEEECCCCBTTCC--
T ss_pred EEEEECCHHHHhc---------ccCCeEEECChhh-hc---------------------ccCCCCEEEECCCCccCCc--
Confidence 7899999877765 4566777777754 11 1157999999877432211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
+.. |.... . ...++.+.++.+ |||+++.++.+. .+..-+..+|++.+ ++.+.+
T Consensus 94 --~~~---~~~~~-~-----~~~~~~~~~~~l-pgG~l~~~~~~~---~~~~~l~~~l~~~g--f~~~~~ 146 (170)
T 3q87_B 94 --DPI---IGGGY-L-----GREVIDRFVDAV-TVGMLYLLVIEA---NRPKEVLARLEERG--YGTRIL 146 (170)
T ss_dssp --CTT---TBCCG-G-----GCHHHHHHHHHC-CSSEEEEEEEGG---GCHHHHHHHHHHTT--CEEEEE
T ss_pred --ccc---ccCCc-c-----hHHHHHHHHhhC-CCCEEEEEEecC---CCHHHHHHHHHHCC--CcEEEE
Confidence 111 11111 1 134666777777 999999988665 34455677777765 444443
No 193
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=92.90 E-value=0.41 Score=46.28 Aligned_cols=88 Identities=18% Similarity=0.038 Sum_probs=55.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-----------------------------CcE-EEEccccCCCCCCccCCCCCcCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-----------------------------ANL-IVTNHEAQHFPGCRANKNFSSASD 51 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-----------------------------~nv-~vtn~Da~~~p~~~~~~~~~~~~~ 51 (620)
|++.|+++.-+..+..++...+. .++ .+...|+...+...
T Consensus 82 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~---------- 151 (265)
T 2i62_A 82 IIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLG---------- 151 (265)
T ss_dssp EEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTT----------
T ss_pred EEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCC----------
Confidence 78999999888887766654321 026 67777776643210
Q ss_pred cCcccccccccCCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 52 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 52 ~g~~~~~~~~~~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
......||.|++-- ++. .+..-..-...+|.++.++|||||+++.++.
T Consensus 152 -------~~~~~~fD~v~~~~------~l~------------~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 152 -------GVSLPPADCLLSTL------CLD------------AACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp -------TCCCCCEEEEEEES------CHH------------HHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -------ccccCCccEEEEhh------hhh------------hhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 01125799999631 111 0000122446789999999999999999874
No 194
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=92.85 E-value=0.17 Score=51.08 Aligned_cols=58 Identities=21% Similarity=0.277 Sum_probs=40.7
Q ss_pred CccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 64 LFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 64 ~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
.||.|++|+- .-.+||++|.. .+|...+++|+|||+|+--||+ .+|...|...+
T Consensus 173 ~~D~iflD~f-----sp~~~p~lw~~--------------~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~aG 226 (257)
T 2qy6_A 173 KVDAWFLDGF-----APAKNPDMWTQ--------------NLFNAMARLARPGGTLATFTSA-------GFVRRGLQEAG 226 (257)
T ss_dssp CEEEEEECSS-----CTTTCGGGCCH--------------HHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHHHT
T ss_pred eEEEEEECCC-----CcccChhhcCH--------------HHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHHCC
Confidence 6999999971 12458887633 5788889999999999832232 36788887764
Q ss_pred CceEEe
Q 007036 144 GSVELV 149 (620)
Q Consensus 144 ~~~eLv 149 (620)
|++.
T Consensus 227 --F~v~ 230 (257)
T 2qy6_A 227 --FTMQ 230 (257)
T ss_dssp --EEEE
T ss_pred --CEEE
Confidence 4543
No 195
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=92.79 E-value=0.37 Score=45.15 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=62.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....+ .++.+...|+..+.... ......||.|++... +.
T Consensus 77 v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~-----------------~~~~~~fD~v~~~~~------l~ 127 (227)
T 3e8s_A 77 AVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAK-----------------VPVGKDYDLICANFA------LL 127 (227)
T ss_dssp EEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTC-----------------SCCCCCEEEEEEESC------CC
T ss_pred EEEEcCCHHHHHHHHHh------cccccchhhHHhhcccc-----------------cccCCCccEEEECch------hh
Confidence 68999998766665544 33444455554431100 011245999998532 21
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhc----------------------------cHH
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE----------------------------NEA 133 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~E----------------------------NEa 133 (620)
.++. ..+|..+.++|||||+++.++-...... ..+
T Consensus 128 -~~~~----------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (227)
T 3e8s_A 128 -HQDI----------------IELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLA 190 (227)
T ss_dssp -SSCC----------------HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHH
T ss_pred -hhhH----------------HHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHH
Confidence 1111 3688899999999999999875322111 346
Q ss_pred HHHHHHHhCCCceEEeeCC
Q 007036 134 VVAEILRKCEGSVELVDVS 152 (620)
Q Consensus 134 VV~~~L~~~~~~~eLvd~~ 152 (620)
-+..+|++++ ++++++.
T Consensus 191 ~~~~~l~~aG--f~~~~~~ 207 (227)
T 3e8s_A 191 SWLNALDMAG--LRLVSLQ 207 (227)
T ss_dssp HHHHHHHHTT--EEEEEEE
T ss_pred HHHHHHHHcC--CeEEEEe
Confidence 6677777775 6666654
No 196
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=92.76 E-value=0.31 Score=44.12 Aligned_cols=74 Identities=15% Similarity=0.210 Sum_probs=51.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++..+.....+ .+++.+...| ..++ ...||.|++... +.
T Consensus 42 v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~~~-----------------------~~~~D~v~~~~~------l~ 86 (170)
T 3i9f_A 42 LYCIDINVIALKEVKEK-----FDSVITLSDP-KEIP-----------------------DNSVDFILFANS------FH 86 (170)
T ss_dssp EEEECSCHHHHHHHHHH-----CTTSEEESSG-GGSC-----------------------TTCEEEEEEESC------ST
T ss_pred EEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CCCC-----------------------CCceEEEEEccc------hh
Confidence 78999998877777665 5677777777 1111 257999997522 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.-++ ...+|.++.++|||||+++.++...
T Consensus 87 ~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 87 DMDD----------------KQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp TCSC----------------HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccC----------------HHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 1111 2578999999999999999986443
No 197
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=92.64 E-value=0.21 Score=49.95 Aligned_cols=81 Identities=16% Similarity=0.016 Sum_probs=59.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+++.-+...+++++..+.. ++.+.+.|+..+|. ..||.|++- .++
T Consensus 99 v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-----------------------~~~d~v~~~------~~l 149 (261)
T 4gek_A 99 IIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-----------------------ENASMVVLN------FTL 149 (261)
T ss_dssp EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-----------------------CSEEEEEEE------SCG
T ss_pred EEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-----------------------cccccceee------eee
Confidence 789999999888888888887754 78899999877652 458988752 121
Q ss_pred ccCcccccccCcchhhhhHHH-HHHHHHHHHhhcccCCEEEEeecCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSL-QVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~l-Q~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
. .+... ...+|.+..+.|||||++|.+.-..
T Consensus 150 ~---------------~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 150 Q---------------FLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp G---------------GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred e---------------ecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 1 11111 2468999999999999999876443
No 198
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=92.63 E-value=0.15 Score=55.95 Aligned_cols=91 Identities=11% Similarity=0.087 Sum_probs=64.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|++. -+...++++++.|. .++.+...|+..++. ...||.|++..+ +.
T Consensus 184 V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~----------------------~~~fD~Ivs~~~----~~- 235 (480)
T 3b3j_A 184 IYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL----------------------PEQVDIIISEPM----GY- 235 (480)
T ss_dssp EEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC----------------------SSCEEEEECCCC----HH-
T ss_pred EEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc----------------------CCCeEEEEEeCc----hH-
Confidence 78999998 78888888999887 689999998866531 146999998765 10
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC--ChhccHHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAVV 135 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl--nP~ENEaVV 135 (620)
.|.. .....+|.++.++|||||+++-+.+++ .|++.+...
T Consensus 236 --------~~~~-------e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~ 277 (480)
T 3b3j_A 236 --------MLFN-------ERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLY 277 (480)
T ss_dssp --------HHTC-------HHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHH
T ss_pred --------hcCc-------HHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHH
Confidence 1111 122456678889999999999766664 456666554
No 199
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=92.57 E-value=0.57 Score=47.37 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=60.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|++ .-+.....++.+.+.. ++.+...|+...+. ...||.|++-
T Consensus 192 ~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------------------~~~~D~v~~~--------- 239 (335)
T 2r3s_A 192 IFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY----------------------GNDYDLVLLP--------- 239 (335)
T ss_dssp EEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC----------------------CSCEEEEEEE---------
T ss_pred EEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC----------------------CCCCcEEEEc---------
Confidence 6899999 8888888888888875 58888888765321 1349999981
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.+...|... ...++|.++.++|+|||+++........
T Consensus 240 ----~~l~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 240 ----NFLHHFDVA-------TCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp ----SCGGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred ----chhccCCHH-------HHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 111223222 2468999999999999988887766543
No 200
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=92.42 E-value=0.88 Score=46.87 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=57.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|+ +.-+.....++.+.+.. ++.+...|+.. + + ...||.|++.-
T Consensus 209 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~---------------------~~~~D~v~~~~-------- 256 (374)
T 1qzz_A 209 GTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P-L---------------------PVTADVVLLSF-------- 256 (374)
T ss_dssp EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C-C---------------------SCCEEEEEEES--------
T ss_pred EEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c-C---------------------CCCCCEEEEec--------
Confidence 678999 88888888888888875 78888888743 1 0 02399999842
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
+...|... ...++|.++.+.|||||+|+....
T Consensus 257 -----vl~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 -----VLLNWSDE-------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -----CGGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -----cccCCCHH-------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 11223322 236899999999999999998776
No 201
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=92.34 E-value=0.25 Score=49.75 Aligned_cols=24 Identities=21% Similarity=0.134 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhcccCCEEEEeec
Q 007036 101 LQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 101 lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
-..++|.++.++|||||+||..+.
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCcEEEEecC
Confidence 347799999999999999998654
No 202
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=92.22 E-value=0.2 Score=47.88 Aligned_cols=77 Identities=18% Similarity=0.143 Sum_probs=52.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....+. ...++.+...|+..++. ....||.|++... +.
T Consensus 69 v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~ 118 (243)
T 3bkw_A 69 VLGLDLSEKMLARARAAG---PDTGITYERADLDKLHL---------------------PQDSFDLAYSSLA------LH 118 (243)
T ss_dssp EEEEESCHHHHHHHHHTS---CSSSEEEEECCGGGCCC---------------------CTTCEEEEEEESC------GG
T ss_pred EEEEcCCHHHHHHHHHhc---ccCCceEEEcChhhccC---------------------CCCCceEEEEecc------cc
Confidence 789999987776665443 33478888888876541 1257999997321 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
.-++ ...+|.++.++|||||+++.++-
T Consensus 119 ~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 119 YVED----------------VARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp GCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccch----------------HHHHHHHHHHhcCcCcEEEEEeC
Confidence 1111 24789999999999999999874
No 203
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=91.85 E-value=1.3 Score=44.49 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=71.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+++.-+...+.|+++.|..+ +.+...|+..... ....||.|++ .|-|
T Consensus 48 V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~---------------------~~~~~D~Ivi----agmG-- 100 (244)
T 3gnl_A 48 AIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE---------------------KKDAIDTIVI----AGMG-- 100 (244)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---------------------GGGCCCEEEE----EEEC--
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC---------------------ccccccEEEE----eCCc--
Confidence 7999999999999999999999875 8888888754211 0125999886 2332
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEee
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 150 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd 150 (620)
..+=.+||..+...|+++|++|-|.- .+..-|...|.+++ |.+++
T Consensus 101 ------------------g~lI~~IL~~~~~~L~~~~~lIlq~~-----~~~~~lr~~L~~~G--f~i~~ 145 (244)
T 3gnl_A 101 ------------------GTLIRTILEEGAAKLAGVTKLILQPN-----IAAWQLREWSEQNN--WLITS 145 (244)
T ss_dssp ------------------HHHHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHHT--EEEEE
T ss_pred ------------------hHHHHHHHHHHHHHhCCCCEEEEEcC-----CChHHHHHHHHHCC--CEEEE
Confidence 12236789999999999999998763 36677777777764 45443
No 204
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=91.80 E-value=0.095 Score=50.44 Aligned_cols=84 Identities=17% Similarity=0.182 Sum_probs=56.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccC-CCCCCccCCCCCcCCCcCcccccccc-cCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQ-HFPGCRANKNFSSASDKGIESESNMG-QLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~-~~p~~~~~~~~~~~~~~g~~~~~~~~-~~~FDrILlDvPCSGdGt 79 (620)
|++.|+++.-+.....+ .+++.+...|+. .+|. . ...||.|++.
T Consensus 73 v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~---------------------~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 73 WAAYDFSPELLKLARAN-----APHADVYEWNGKGELPA---------------------GLGAPFGLIVSR-------- 118 (226)
T ss_dssp EEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCT---------------------TCCCCEEEEEEE--------
T ss_pred EEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCC---------------------cCCCCEEEEEeC--------
Confidence 78999999877776655 567888888883 3331 1 2579999975
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCC
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 143 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~ 143 (620)
++ +..+|.++.++|||||+++...... +...+...|.+.+
T Consensus 119 ----~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~----~~~~~~~~l~~~G 158 (226)
T 3m33_A 119 ----RG----------------PTSVILRLPELAAPDAHFLYVGPRL----NVPEVPERLAAVG 158 (226)
T ss_dssp ----SC----------------CSGGGGGHHHHEEEEEEEEEEESSS----CCTHHHHHHHHTT
T ss_pred ----CC----------------HHHHHHHHHHHcCCCcEEEEeCCcC----CHHHHHHHHHHCC
Confidence 11 2345667889999999999332222 3345677777765
No 205
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=91.38 E-value=0.79 Score=46.15 Aligned_cols=92 Identities=12% Similarity=0.097 Sum_probs=61.3
Q ss_pred EEEEcCChhHHHHHHHHHHHh-------CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-------CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 74 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-------g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC 74 (620)
|++.|++..-+.....+.... +..++.+...|+..++... .+ ......||.|++--
T Consensus 60 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~------------~~~~~~fD~V~~~~-- 122 (313)
T 3bgv_A 60 LVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID---KF------------RDPQMCFDICSCQF-- 122 (313)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT---TC------------SSTTCCEEEEEEET--
T ss_pred EEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh---hc------------ccCCCCEEEEEEec--
Confidence 789999999888888877765 4557888888987765100 00 00124799999731
Q ss_pred ccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 75 SGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 75 SGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
++ .|...+. .-...+|.++.++|||||+++.+|...
T Consensus 123 ----~l--------~~~~~~~----~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 123 ----VC--------HYSFESY----EQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp ----CG--------GGGGGSH----HHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ----ch--------hhccCCH----HHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 11 2211111 123578999999999999999988753
No 206
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=91.32 E-value=0.54 Score=52.32 Aligned_cols=119 Identities=15% Similarity=0.106 Sum_probs=69.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+++.-+.+.+.++...|.. ++.+.+.|+...+. .....||.||+.+|=++....
T Consensus 286 i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~--------------------~~~~~fD~Iv~NPPf~~~~~~ 345 (544)
T 3khk_A 286 VYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ--------------------HPDLRADFVMTNPPFNMKDWW 345 (544)
T ss_dssp EEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS--------------------CTTCCEEEEEECCCSSCCSCC
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc--------------------cccccccEEEECCCcCCcccc
Confidence 688999999888888888777764 33224555433221 112679999999999864211
Q ss_pred cc--CcccccccCcch-------hhhhHHHHHHHHHHHHhhcccCCEEEEeec--CCChh-ccHHHHHHHHHhC
Q 007036 81 RK--APDIWRKWNVGL-------GNGLHSLQVQIAMRGISLLKVGGRIVYSTC--SMNPV-ENEAVVAEILRKC 142 (620)
Q Consensus 81 rK--~pdiw~~w~~~~-------~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC--SlnP~-ENEaVV~~~L~~~ 142 (620)
.. ..+. +|..+. ...-...+...|.+++.+||+||++++.+= +|... -.+.-+.+.|-+.
T Consensus 346 ~~~~~~d~--r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~ 417 (544)
T 3khk_A 346 HEKLADDP--RWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQ 417 (544)
T ss_dssp CGGGTTCG--GGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHT
T ss_pred chhhhhhh--hhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhC
Confidence 10 0111 221110 111223345689999999999999887753 23322 2345555555443
No 207
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=91.14 E-value=1.5 Score=45.38 Aligned_cols=85 Identities=13% Similarity=0.059 Sum_probs=57.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCC-CCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFP-GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGT 79 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p-~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGt 79 (620)
+++.|+ +.-+.....++.+.+. .++.+..+|+.... .+ +..||.|++--
T Consensus 206 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------------------p~~~D~v~~~~------- 256 (363)
T 3dp7_A 206 VTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF---------------------PTGFDAVWMSQ------- 256 (363)
T ss_dssp EEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC---------------------CCCCSEEEEES-------
T ss_pred EEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC---------------------CCCcCEEEEec-------
Confidence 678888 7777777777766665 47888888875531 00 14689988621
Q ss_pred cccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 80 LRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 80 lrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
+...|...+ ..+||.++.+.|||||+|+.....+..
T Consensus 257 ------vlh~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 257 ------FLDCFSEEE-------VISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp ------CSTTSCHHH-------HHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred ------hhhhCCHHH-------HHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 122344322 268899999999999999887765544
No 208
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=90.92 E-value=2.7 Score=42.68 Aligned_cols=83 Identities=12% Similarity=0.012 Sum_probs=58.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|+ +.-+.....++.+.+. .++.+..+|+.. + + +..||.|++=
T Consensus 196 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~---------------------p~~~D~v~~~--------- 242 (332)
T 3i53_A 196 GTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P-L---------------------PAGAGGYVLS--------- 242 (332)
T ss_dssp EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C-C---------------------CCSCSEEEEE---------
T ss_pred EEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C-C---------------------CCCCcEEEEe---------
Confidence 577898 8888888888888776 578888887742 1 0 1269999862
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.+...|... .+.++|.++.+.|+|||+|+-....+..
T Consensus 243 ----~vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 243 ----AVLHDWDDL-------SAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp ----SCGGGSCHH-------HHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred ----hhhccCCHH-------HHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 122234332 3578999999999999999887665543
No 209
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=90.84 E-value=0.6 Score=46.18 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=59.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhC----CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC----TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg----~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+++.-+.....++...+ ..++.+...|+..++.- ......||.|+|- |.
T Consensus 82 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------------~~~~~~fD~V~~~----g~ 139 (293)
T 3thr_A 82 VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD------------------VPAGDGFDAVICL----GN 139 (293)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH------------------SCCTTCEEEEEEC----TT
T ss_pred EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc------------------cccCCCeEEEEEc----Ch
Confidence 7899999998888887764433 23566777776554310 0112679999972 11
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
++..-++++. -.....++|.++.++|||||+++.+++.
T Consensus 140 -~l~~~~~~~~---------~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 140 -SFAHLPDSKG---------DQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp -CGGGSCCSSS---------SSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -HHhhcCcccc---------CHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 1222222211 1123467899999999999999999886
No 210
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=90.84 E-value=1.8 Score=44.40 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=56.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|+ +.-+....+++++.+.. ++.+...|+.. + + ...||.|++.-.
T Consensus 210 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~---------------------~~~~D~v~~~~v------- 258 (360)
T 1tw3_A 210 ATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P-L---------------------PRKADAIILSFV------- 258 (360)
T ss_dssp EEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C-C---------------------SSCEEEEEEESC-------
T ss_pred EEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C-C---------------------CCCccEEEEccc-------
Confidence 577888 88888888888888875 78888888743 1 0 123999987321
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
...|... ...++|.++.+.|||||+++.+...
T Consensus 259 ------l~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 259 ------LLNWPDH-------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ------GGGSCHH-------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ------ccCCCHH-------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 1123221 2268999999999999999987765
No 211
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=90.83 E-value=1.1 Score=46.14 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=59.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|+ +.-+.....++++.+.++ +.+...|+...|. ..+|.|++-
T Consensus 217 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------------------~~~D~v~~~--------- 263 (359)
T 1x19_A 217 STILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-----------------------PEADAVLFC--------- 263 (359)
T ss_dssp EEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-----------------------CCCSEEEEE---------
T ss_pred EEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-----------------------CCCCEEEEe---------
Confidence 688999 888888888888888765 8888888865431 224888872
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.+...|.. ....++|.++.+.|||||+++.......
T Consensus 264 ----~vlh~~~d-------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 264 ----RILYSANE-------QLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp ----SCGGGSCH-------HHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred ----chhccCCH-------HHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 12223433 2347899999999999999987765543
No 212
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=90.44 E-value=0.16 Score=49.48 Aligned_cols=85 Identities=15% Similarity=0.095 Sum_probs=55.0
Q ss_pred EEEEcCChhHH----HHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRC----NLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~----~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|++.|+++..+ .....++++.+.+|+.+...|+..+|.. ....||.|.+..|
T Consensus 51 v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~--------------------~~d~v~~i~~~~~---- 106 (225)
T 3p2e_A 51 YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE--------------------LKNIADSISILFP---- 106 (225)
T ss_dssp EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG--------------------GTTCEEEEEEESC----
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh--------------------ccCeEEEEEEeCC----
Confidence 78999996555 4446666778888999999999887531 0134666666544
Q ss_pred cccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 78 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 78 GtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
|.. . ..........+|....++|||||+++.++
T Consensus 107 ---------~~~---~-~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 107 ---------WGT---L-LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp ---------CHH---H-HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---------CcH---H-hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 111 0 00011112467889999999999999844
No 213
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=90.41 E-value=1.4 Score=41.78 Aligned_cols=75 Identities=17% Similarity=0.208 Sum_probs=49.9
Q ss_pred EEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccccc
Q 007036 3 IANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK 82 (620)
Q Consensus 3 vAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlrK 82 (620)
++.|++..-+.....+ ++.+...|+..+|. ....||.|++.- ++..
T Consensus 69 ~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~------~l~~ 114 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR-------GVFVLKGTAENLPL---------------------KDESFDFALMVT------TICF 114 (219)
T ss_dssp EEEESCHHHHHHHHHT-------TCEEEECBTTBCCS---------------------CTTCEEEEEEES------CGGG
T ss_pred hccCCCHHHHHHHHhc-------CCEEEEcccccCCC---------------------CCCCeeEEEEcc------hHhh
Confidence 5788888776665544 45667777765541 125699999752 2211
Q ss_pred CcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 83 APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 83 ~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
-++ ...+|..+.++|+|||+++.++....
T Consensus 115 ~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 115 VDD----------------PERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp SSC----------------HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ccC----------------HHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 111 14788999999999999999886543
No 214
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=90.15 E-value=0.37 Score=45.73 Aligned_cols=86 Identities=5% Similarity=-0.034 Sum_probs=55.3
Q ss_pred EEEEcCChhHHHHHHHHHHH------------hCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEE
Q 007036 2 VIANDLDVQRCNLLIHQTKR------------MCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVL 69 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kR------------lg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrIL 69 (620)
|+|.|++..-+...+++... ....++.+...|+..+|.. ....||.|+
T Consensus 47 V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~--------------------~~~~fD~v~ 106 (203)
T 1pjz_A 47 VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR--------------------DIGHCAAFY 106 (203)
T ss_dssp EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH--------------------HHHSEEEEE
T ss_pred EEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc--------------------cCCCEEEEE
Confidence 78999998877776654321 1235777778887765420 014699998
Q ss_pred EcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 70 CDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 70 lDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
+-. ++..- . .....+.|.+..++|||||++++.|+...
T Consensus 107 ~~~------~l~~l-------~-------~~~~~~~l~~~~r~LkpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 107 DRA------AMIAL-------P-------ADMRERYVQHLEALMPQACSGLLITLEYD 144 (203)
T ss_dssp EES------CGGGS-------C-------HHHHHHHHHHHHHHSCSEEEEEEEEESSC
T ss_pred ECc------chhhC-------C-------HHHHHHHHHHHHHHcCCCcEEEEEEEecC
Confidence 521 12110 1 12235688999999999999888887654
No 215
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=89.75 E-value=0.77 Score=43.18 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=34.2
Q ss_pred HHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 103 VQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 103 ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..+|..+.++|+|||+++.+++... ..+..-+..+|++.+ ++++..
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~-~~~~~~~~~~l~~~G--f~~~~~ 176 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSR-FEDVRTFLRAVTKLG--FKIVSK 176 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGG-CSCHHHHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCC-CCCHHHHHHHHHHCC--CEEEEE
Confidence 5788899999999999999876532 235666778888875 565553
No 216
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=89.62 E-value=0.57 Score=44.40 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=51.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++..-+.....++ .. ++.+...|+..++. ...||.|++-- ++.
T Consensus 67 v~gvD~s~~~~~~a~~~~---~~-~v~~~~~d~~~~~~----------------------~~~fD~v~~~~------~l~ 114 (250)
T 2p7i_A 67 ITCVEASEEAISHAQGRL---KD-GITYIHSRFEDAQL----------------------PRRYDNIVLTH------VLE 114 (250)
T ss_dssp EEEEESCHHHHHHHHHHS---CS-CEEEEESCGGGCCC----------------------SSCEEEEEEES------CGG
T ss_pred EEEEeCCHHHHHHHHHhh---hC-CeEEEEccHHHcCc----------------------CCcccEEEEhh------HHH
Confidence 789999987665555433 22 78888888766421 25699999741 222
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHH-hhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGI-SLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl-~lLk~GG~LVYSTCSl 126 (620)
.-++ ...+|..+. ++|||||+++.++...
T Consensus 115 ~~~~----------------~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 115 HIDD----------------PVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp GCSS----------------HHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred hhcC----------------HHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 1111 147889999 9999999999988543
No 217
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=89.27 E-value=2.1 Score=42.08 Aligned_cols=22 Identities=32% Similarity=0.315 Sum_probs=20.0
Q ss_pred HHHHHHHHhhcccCCEEEEeec
Q 007036 103 VQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 103 ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
.++|.+..++|||||++|.|+.
T Consensus 177 ~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 177 RAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEe
Confidence 5689999999999999999974
No 218
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=89.18 E-value=1.5 Score=43.85 Aligned_cols=88 Identities=17% Similarity=0.065 Sum_probs=49.5
Q ss_pred EEEEcC-ChhHHHHHHHHH-----HHhCCC-----cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEE
Q 007036 2 VIANDL-DVQRCNLLIHQT-----KRMCTA-----NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLC 70 (620)
Q Consensus 2 VvAnD~-d~kR~~~L~~~~-----kRlg~~-----nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILl 70 (620)
|+|.|+ ++.-+..++.++ ++.+.. ++.+...|......- + ........||.|++
T Consensus 105 v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~--------------~~~~~~~~fD~Ii~ 169 (281)
T 3bzb_A 105 VVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS-L--------------QRCTGLQRFQVVLL 169 (281)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH-H--------------HHHHSCSSBSEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH-H--------------HhhccCCCCCEEEE
Confidence 799999 899999999998 555543 566654443221100 0 00001257999987
Q ss_pred -cCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcc---c--CCEEEEeecCCC
Q 007036 71 -DVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK---V--GGRIVYSTCSMN 127 (620)
Q Consensus 71 -DvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk---~--GG~LVYSTCSln 127 (620)
|+..- .. ....+|....++|+ + ||+++.+.+...
T Consensus 170 ~dvl~~----------------~~-------~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 170 ADLLSF----------------HQ-------AHDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp ESCCSC----------------GG-------GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred eCcccC----------------hH-------HHHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 54421 11 13567788888999 9 997665444433
No 219
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=89.15 E-value=0.28 Score=52.91 Aligned_cols=57 Identities=7% Similarity=0.009 Sum_probs=45.5
Q ss_pred EEEEcCChhHHHHHHHHHHHh--CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 77 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl--g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGd 77 (620)
|+|.|+|+..+.+.++|++++ |..++.+.+.|+..+-.. .....||.|++|+|=.+.
T Consensus 118 V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-------------------~~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 118 GIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-------------------IKTFHPDYIYVDPARRSG 176 (410)
T ss_dssp EEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-------------------HHHHCCSEEEECCEEC--
T ss_pred EEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-------------------ccCCCceEEEECCCCcCC
Confidence 799999999999999999999 888999999998764110 011469999999996663
No 220
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=89.08 E-value=1.2 Score=43.95 Aligned_cols=76 Identities=20% Similarity=0.182 Sum_probs=52.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++ +++.+...|+..+|. ...||.|++... +.
T Consensus 82 v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----------------------~~~fD~v~~~~~------l~ 128 (279)
T 3ccf_A 82 VLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV----------------------DKPLDAVFSNAM------LH 128 (279)
T ss_dssp EEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC----------------------SSCEEEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc----------------------CCCcCEEEEcch------hh
Confidence 789999988777665443 566677777766541 156999997421 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
|-+ + ...+|..+.++|||||+++.++...
T Consensus 129 --------~~~-d-------~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 129 --------WVK-E-------PEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp --------GCS-C-------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred --------hCc-C-------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 111 1 1468899999999999999987654
No 221
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=88.92 E-value=0.27 Score=50.66 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=45.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|+|.|.|+.-+....+++++.| .++.+.+.|+..++.. +. ......||.||+|+|||.
T Consensus 53 VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~-l~---------------~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 53 IIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFL-LK---------------TLGIEKVDGILMDLGVST 110 (301)
T ss_dssp EEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHH-HH---------------HTTCSCEEEEEEECSCCH
T ss_pred EEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHH-HH---------------hcCCCCCCEEEEcCccch
Confidence 7999999999999999998888 7899999998775421 00 001146999999999985
No 222
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=88.19 E-value=0.42 Score=46.75 Aligned_cols=70 Identities=13% Similarity=0.123 Sum_probs=48.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|++...+.....+. +++.+...|+..+|. ....||.|++--.
T Consensus 112 v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~-------- 157 (269)
T 1p91_A 112 TFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF---------------------SDTSMDAIIRIYA-------- 157 (269)
T ss_dssp EEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB---------------------CTTCEEEEEEESC--------
T ss_pred EEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC---------------------CCCceeEEEEeCC--------
Confidence 789999998887765442 456677777766541 1256999996211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
+ ..|..+.++|||||+++.++-..
T Consensus 158 --~-------------------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 --P-------------------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp --C-------------------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred --h-------------------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 0 12677889999999999988654
No 223
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=87.82 E-value=2.3 Score=40.69 Aligned_cols=47 Identities=15% Similarity=0.083 Sum_probs=32.0
Q ss_pred HHHHHHHHhhcccCCEEEEeecCCChh---------------ccHHHHHHHHHhCCCceEEeeC
Q 007036 103 VQIAMRGISLLKVGGRIVYSTCSMNPV---------------ENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 103 ~~IL~rAl~lLk~GG~LVYSTCSlnP~---------------ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..+|..+.++|||||+++.++...... =...-+..+|++.+ ++++.+
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~ 181 (240)
T 3dli_A 120 FELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLG--FRDVKI 181 (240)
T ss_dssp HHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHT--CEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCC--CeEEEE
Confidence 578899999999999999988653321 12345566777765 444443
No 224
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=87.72 E-value=1 Score=43.85 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=52.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....++ +++.+...|+..++. ...||.|++... ++.
T Consensus 75 v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~----------------------~~~fD~v~~~~~-----~l~ 122 (263)
T 3pfg_A 75 VEGLELSADMLAIARRRN-----PDAVLHHGDMRDFSL----------------------GRRFSAVTCMFS-----SIG 122 (263)
T ss_dssp EEEEESCHHHHHHHHHHC-----TTSEEEECCTTTCCC----------------------SCCEEEEEECTT-----GGG
T ss_pred EEEEECCHHHHHHHHhhC-----CCCEEEECChHHCCc----------------------cCCcCEEEEcCc-----hhh
Confidence 789999988777666543 267778888877542 257999997421 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
.-+ + ..-..++|.++.++|||||+++.++.
T Consensus 123 ~~~------~-------~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 123 HLA------G-------QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp GSC------H-------HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred hcC------C-------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 100 0 12236789999999999999998743
No 225
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=87.68 E-value=1.5 Score=44.80 Aligned_cols=86 Identities=14% Similarity=0.061 Sum_probs=59.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|. +.-+.....++.+.+.. ++.+..+|+...+.. ....||.|++-
T Consensus 206 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--------------------~~~~~D~v~~~--------- 255 (352)
T 3mcz_A 206 GQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF--------------------EGGAADVVMLN--------- 255 (352)
T ss_dssp EEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG--------------------TTCCEEEEEEE---------
T ss_pred EEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc--------------------CCCCccEEEEe---------
Confidence 577888 77777778788887764 588888887553210 11459999981
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
.+...|.... ..++|.++.+.|||||+|+.....+..
T Consensus 256 ----~vlh~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 256 ----DCLHYFDARE-------AREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp ----SCGGGSCHHH-------HHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred ----cccccCCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 1223444332 478999999999999999887765544
No 226
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=87.39 E-value=0.26 Score=49.71 Aligned_cols=68 Identities=18% Similarity=0.165 Sum_probs=38.7
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCC--EEEEeecCCChhccH--HHHHHH
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG--RIVYSTCSMNPVENE--AVVAEI 138 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG--~LVYSTCSlnP~ENE--aVV~~~ 138 (620)
..||.|++|.. ...|. |... +..+..+|..+.++||||| .+|..+-. |..++ +.+..+
T Consensus 139 ~~fD~V~sd~~-~~~~~----------~~~d-----~~~~l~~L~~~~r~LkpGG~~~fv~kv~~--~~~~~~~~~l~~l 200 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESSPK----------WSVE-----SERTIKILELLEKWKVKNPSADFVVKVLC--PYSVEVMERLSVM 200 (265)
T ss_dssp CCCSEEEECCC-CCCSC----------HHHH-----HHHHHHHHHHHHHHHHHCTTCEEEEEESC--TTSHHHHHHHHHH
T ss_pred CCCcEEEEeCc-ccCCc----------cchh-----HHHHHHHHHHHHHHhccCCCeEEEEEeCC--CCChhHHHHHHHH
Confidence 56999999965 22221 1111 1112337888889999999 88876643 44332 444444
Q ss_pred HHhCCCceEEe
Q 007036 139 LRKCEGSVELV 149 (620)
Q Consensus 139 L~~~~~~~eLv 149 (620)
...++ .+.+.
T Consensus 201 ~~~f~-~v~~~ 210 (265)
T 2oxt_A 201 QRKWG-GGLVR 210 (265)
T ss_dssp HHHHC-CEEEC
T ss_pred HHHcC-CEEEE
Confidence 44453 34443
No 227
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=87.24 E-value=6.9 Score=40.54 Aligned_cols=83 Identities=10% Similarity=-0.044 Sum_probs=59.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|+ +.-+.....++...+. .++.+..+|+.. + + +..||.|++--
T Consensus 229 ~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~-~---------------------p~~~D~v~~~~-------- 276 (369)
T 3gwz_A 229 GTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-T-I---------------------PDGADVYLIKH-------- 276 (369)
T ss_dssp EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-C-C---------------------CSSCSEEEEES--------
T ss_pred EEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-C-C---------------------CCCceEEEhhh--------
Confidence 578898 8888888888888775 578888888752 1 0 12699998631
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
+...|... ...++|.+..+.|||||+|+.....+..
T Consensus 277 -----vlh~~~d~-------~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 277 -----VLHDWDDD-------DVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp -----CGGGSCHH-------HHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred -----hhccCCHH-------HHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 22234332 2368999999999999999987776654
No 228
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=87.06 E-value=0.98 Score=44.87 Aligned_cols=85 Identities=14% Similarity=0.090 Sum_probs=53.3
Q ss_pred EEEEcCChhHHHHHHHHHHH-----------------hCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCC
Q 007036 2 VIANDLDVQRCNLLIHQTKR-----------------MCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLL 64 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kR-----------------lg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 64 (620)
|+|.|+++.=+......... -...++.+...|+..++.. ....
T Consensus 93 V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~--------------------~~~~ 152 (252)
T 2gb4_A 93 VVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRA--------------------NIGK 152 (252)
T ss_dssp EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGG--------------------CCCC
T ss_pred EEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcc--------------------cCCC
Confidence 79999998876665433210 0125788888888665420 0157
Q ss_pred ccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 65 FDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 65 FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
||.|++= +++..-| + ..+.+++.+..++|||||+++..|...
T Consensus 153 FD~V~~~------~~l~~l~-------~-------~~~~~~l~~~~~~LkpGG~l~l~~~~~ 194 (252)
T 2gb4_A 153 FDRIWDR------GALVAIN-------P-------GDHDRYADIILSLLRKEFQYLVAVLSY 194 (252)
T ss_dssp EEEEEES------SSTTTSC-------G-------GGHHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred EEEEEEh------hhhhhCC-------H-------HHHHHHHHHHHHHcCCCeEEEEEEEec
Confidence 9999842 1221111 1 123578889999999999998777653
No 229
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=86.81 E-value=2.7 Score=42.80 Aligned_cols=91 Identities=10% Similarity=0.080 Sum_probs=53.2
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC------cEEEEccccCCCCC-CccCCCCCcCCCcCcccccccccCCccEEEEcCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA------NLIVTNHEAQHFPG-CRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 74 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~------nv~vtn~Da~~~p~-~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC 74 (620)
|++.|++..-+..-+......+.. ++.....|...-.. ..+. .......||.|+|--
T Consensus 74 v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~--------------~~~~~~~FD~V~~~~-- 137 (302)
T 2vdw_A 74 LVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVR--------------EVFYFGKFNIIDWQF-- 137 (302)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHH--------------TTCCSSCEEEEEEES--
T ss_pred EEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhh--------------ccccCCCeeEEEECc--
Confidence 789999999888888877766643 13233333311000 0000 001125799998531
Q ss_pred ccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 75 SGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 75 SGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
++. --|... + +..+|.++.++|||||+++.+|..
T Consensus 138 ----~lh------y~~~~~-----~--~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 138 ----AIH------YSFHPR-----H--YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp ----CGG------GTCSTT-----T--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----hHH------HhCCHH-----H--HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 111 112222 1 258999999999999999999874
No 230
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=86.54 E-value=1.6 Score=44.99 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=62.8
Q ss_pred EEEEcCChhHHHHHHHHHHHh-----CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|+..|+|+.=+.+-+.-+..+ .-+++.|...||..|-. ....+||.|++|.+-.
T Consensus 110 v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~--------------------~~~~~yDvIi~D~~dp- 168 (294)
T 3o4f_A 110 ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN--------------------QTSQTFDVIISDCTDP- 168 (294)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTS--------------------CSSCCEEEEEESCCCC-
T ss_pred EEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHh--------------------hccccCCEEEEeCCCc-
Confidence 678899988777776665443 34789999999988732 1126799999998731
Q ss_pred ccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee--cCCChhccHHHHHH
Q 007036 77 DGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST--CSMNPVENEAVVAE 137 (620)
Q Consensus 77 dGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST--CSlnP~ENEaVV~~ 137 (620)
.| +. ..| ...+.+..+.+.|++||.+|.=+ +.+++..-..+.+.
T Consensus 169 ~~-------------~~--~~L--~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~ 214 (294)
T 3o4f_A 169 IG-------------PG--ESL--FTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRK 214 (294)
T ss_dssp CC-------------TT--CCS--SCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHH
T ss_pred CC-------------Cc--hhh--cCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHH
Confidence 11 11 111 23556777888999999998632 33444433333333
No 231
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=86.50 E-value=0.3 Score=49.51 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=29.9
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCC--EEEEeecC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG--RIVYSTCS 125 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG--~LVYSTCS 125 (620)
..||.|++|.. .-.|. |... +..+.++|..+.++||||| .+|..+-+
T Consensus 147 ~~fD~Vvsd~~-~~~~~----------~~~d-----~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 147 FQADTVLCDIG-ESNPT----------AAVE-----ASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSEEEECCC-CCCSC----------HHHH-----HHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCcCEEEECCC-cCCCc----------hhhh-----HHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 56999999975 32221 1111 1112337888889999999 88876544
No 232
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=86.41 E-value=0.56 Score=45.96 Aligned_cols=73 Identities=12% Similarity=0.007 Sum_probs=51.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|+|..=+....+++.++|.. ++.+. |.... .....||.||+=
T Consensus 76 ~~A~Di~~~~leiar~~~~~~g~~~~v~~~--d~~~~----------------------~~~~~~DvVLa~--------- 122 (200)
T 3fzg_A 76 YHAYDIDRAEIAFLSSIIGKLKTTIKYRFL--NKESD----------------------VYKGTYDVVFLL--------- 122 (200)
T ss_dssp EEEECSCHHHHHHHHHHHHHSCCSSEEEEE--CCHHH----------------------HTTSEEEEEEEE---------
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCccEEEe--ccccc----------------------CCCCCcChhhHh---------
Confidence 789999999999999999999998 67663 22110 112569999852
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEE
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 120 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LV 120 (620)
++..|-.-|...+.+.+++|++||.+|
T Consensus 123 -------------k~LHlL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 123 -------------KMLPVLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp -------------TCHHHHHHTTCCHHHHHHTCEEEEEEE
T ss_pred -------------hHHHhhhhhHHHHHHHHHHhCCCCEEE
Confidence 122222444556669999999988766
No 233
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=86.14 E-value=0.47 Score=55.47 Aligned_cols=132 Identities=13% Similarity=-0.026 Sum_probs=70.4
Q ss_pred EEEEcCChhHHHHH--HHHHHH----hCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCc
Q 007036 2 VIANDLDVQRCNLL--IHQTKR----MCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS 75 (620)
Q Consensus 2 VvAnD~d~kR~~~L--~~~~kR----lg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCS 75 (620)
|+|.|+|+.-+.+. +.++.. .+..+..+...|...... .....||.|++.+|=+
T Consensus 351 IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~--------------------~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 351 IWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP--------------------EDFANVSVVVMNPPYV 410 (878)
T ss_dssp EEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG--------------------GGGTTEEEEEECCBCC
T ss_pred EEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc--------------------cccCCCCEEEECCCcc
Confidence 68999999988777 333322 223333444444433110 1125799999999997
Q ss_pred cccccccC-ccccccc------CcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC-CCh--hccHHHHHHHHHhCCCc
Q 007036 76 GDGTLRKA-PDIWRKW------NVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS-MNP--VENEAVVAEILRKCEGS 145 (620)
Q Consensus 76 GdGtlrK~-pdiw~~w------~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS-lnP--~ENEaVV~~~L~~~~~~ 145 (620)
+....... .+....+ .+....+...+...++.+|+.+|++||++++-+=+ +.- -..+.-+.+.|-+...-
T Consensus 411 ~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~~I 490 (878)
T 3s1s_A 411 SGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGL 490 (878)
T ss_dssp SSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTTCE
T ss_pred ccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCCCe
Confidence 64322111 0100000 01111223356778999999999999999886533 221 11234444444433333
Q ss_pred eEEeeCCC
Q 007036 146 VELVDVSN 153 (620)
Q Consensus 146 ~eLvd~~~ 153 (620)
..+++++.
T Consensus 491 ~aIIdLP~ 498 (878)
T 3s1s_A 491 EHIFLYPR 498 (878)
T ss_dssp EEEEECCB
T ss_pred EEEEECCC
Confidence 46666543
No 234
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=85.89 E-value=3.2 Score=48.90 Aligned_cols=82 Identities=11% Similarity=0.077 Sum_probs=59.4
Q ss_pred EEEEcCChhHHHHHHHHHHHh------CCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM------CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS 75 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl------g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCS 75 (620)
|++.|++..-+....++++.. +.+++.+...|+..+|. ....||.|++-
T Consensus 749 VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~---------------------~d~sFDlVV~~---- 803 (950)
T 3htx_A 749 IIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS---------------------RLHDVDIGTCL---- 803 (950)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT---------------------TSCSCCEEEEE----
T ss_pred EEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc---------------------ccCCeeEEEEe----
Confidence 789999999888888766643 66789999999988653 12579999992
Q ss_pred cccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 76 GDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 76 GdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
+++..-++ .....+|..+.++|||| .++.+|..
T Consensus 804 --eVLeHL~d--------------p~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 804 --EVIEHMEE--------------DQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp --SCGGGSCH--------------HHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred --CchhhCCh--------------HHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 22221111 12346888999999998 88888864
No 235
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=85.68 E-value=0.97 Score=45.15 Aligned_cols=78 Identities=12% Similarity=0.003 Sum_probs=51.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|++..-+.. ++ ..+++.+...|+..+|- ....||.|++= .++
T Consensus 64 v~gvD~s~~ml~~----a~--~~~~v~~~~~~~e~~~~---------------------~~~sfD~v~~~------~~~- 109 (257)
T 4hg2_A 64 VHAVDPGEAQIRQ----AL--RHPRVTYAVAPAEDTGL---------------------PPASVDVAIAA------QAM- 109 (257)
T ss_dssp EEEEESCHHHHHT----CC--CCTTEEEEECCTTCCCC---------------------CSSCEEEEEEC------SCC-
T ss_pred EEEEeCcHHhhhh----hh--hcCCceeehhhhhhhcc---------------------cCCcccEEEEe------eeh-
Confidence 7899999753322 22 24688888888877652 12679999971 111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChh
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 129 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ 129 (620)
.|-.. .+.|..+.+.|||||+|+..+.+....
T Consensus 110 -------h~~~~---------~~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 110 -------HWFDL---------DRFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp -------TTCCH---------HHHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred -------hHhhH---------HHHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 22211 146778889999999999888776544
No 236
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=85.41 E-value=3.5 Score=40.09 Aligned_cols=86 Identities=15% Similarity=0.072 Sum_probs=54.0
Q ss_pred EEEEcCChh------HHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCC
Q 007036 2 VIANDLDVQ------RCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 74 (620)
Q Consensus 2 VvAnD~d~k------R~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC 74 (620)
|++.|++.. -+...+.+++..+. +++.+...| .+-...+ ......||.|++.-.
T Consensus 71 v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~----------------~~~~~~fD~v~~~~~- 131 (275)
T 3bkx_A 71 VTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT--NLSDDLG----------------PIADQHFDRVVLAHS- 131 (275)
T ss_dssp EEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC--CTTTCCG----------------GGTTCCCSEEEEESC-
T ss_pred EEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC--hhhhccC----------------CCCCCCEEEEEEccc-
Confidence 789999987 78888888887776 578888887 1110000 011257999997532
Q ss_pred ccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 75 SGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 75 SGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
+..-++ . ..++.....++++||+++.++.+..
T Consensus 132 -----l~~~~~---------~-------~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 132 -----LWYFAS---------A-------NALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp -----GGGSSC---------H-------HHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred -----hhhCCC---------H-------HHHHHHHHHHhCCCCEEEEEEecCC
Confidence 211111 0 1245555667777999999887764
No 237
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=85.29 E-value=4.3 Score=43.08 Aligned_cols=51 Identities=10% Similarity=0.194 Sum_probs=44.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 74 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC 74 (620)
|++.|+|+.=+...+.|+++.|..+ +.+.+.|+..++. ...||.|++|+|-
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~----------------------~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT----------------------NKINGVLISNPPY 310 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC----------------------CCCSCEEEECCCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc----------------------cCCcCEEEECCch
Confidence 8999999999999999999999875 8899999987652 1469999999996
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=84.69 E-value=4.1 Score=40.25 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhcccCCEEEEeecCC------------ChhccHHHHHHHHHhCCCceEEeeC
Q 007036 102 QVQIAMRGISLLKVGGRIVYSTCSM------------NPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 102 Q~~IL~rAl~lLk~GG~LVYSTCSl------------nP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..++|.++.++|||||+++.+...- ..-=+.+-+..+|++.+ |+++.+
T Consensus 194 ~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~ 253 (289)
T 2g72_A 194 FQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSG--YKVRDL 253 (289)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcC--CeEEEe
Confidence 4678999999999999999874211 00113455677777765 555554
No 239
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=84.56 E-value=1.7 Score=41.62 Aligned_cols=87 Identities=10% Similarity=-0.023 Sum_probs=55.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+..... ++...++.+...|+..++... . -.....||.|++.....-
T Consensus 81 v~gvD~s~~~~~~a~~---~~~~~~~~~~~~d~~~~~~~~---------------~-~~~~~~~d~v~~~~~~~~----- 136 (245)
T 3ggd_A 81 VIGLDVSKSALEIAAK---ENTAANISYRLLDGLVPEQAA---------------Q-IHSEIGDANIYMRTGFHH----- 136 (245)
T ss_dssp EEEEESCHHHHHHHHH---HSCCTTEEEEECCTTCHHHHH---------------H-HHHHHCSCEEEEESSSTT-----
T ss_pred EEEEECCHHHHHHHHH---hCcccCceEEECccccccccc---------------c-cccccCccEEEEcchhhc-----
Confidence 7899999866655554 445568888888887643210 0 000124899998743211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
..+.+ ..++|.++.++|||||+|+.+..+..
T Consensus 137 --------~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 137 --------IPVEK-------RELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp --------SCGGG-------HHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred --------CCHHH-------HHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 11111 26789999999999999988887654
No 240
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=84.42 E-value=1.4 Score=43.06 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=51.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....+.. .+ +...|+..+|. ....||.|++....
T Consensus 79 v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~---------------------~~~~fD~v~~~~~~------- 124 (260)
T 2avn_A 79 VVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPF---------------------PSGAFEAVLALGDV------- 124 (260)
T ss_dssp EEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCS---------------------CTTCEEEEEECSSH-------
T ss_pred EEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCC---------------------CCCCEEEEEEcchh-------
Confidence 7899999887776665432 23 45566665541 12569999964211
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
..|.+. ...+|.++.++|||||+++.++.+.
T Consensus 125 ------~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 125 ------LSYVEN--------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp ------HHHCSC--------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ------hhcccc--------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 011111 4678899999999999999988764
No 241
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=83.98 E-value=3.1 Score=41.85 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=52.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|.|+++.-+..++.++... . .+.+...++.. .. ......||.|+++.. +.
T Consensus 70 V~gvD~S~~ml~~Ar~~~~~~---~---v~~~~~~~~~~-~~---------------~~~~~~fD~Vv~~~~------l~ 121 (261)
T 3iv6_A 70 VTVFDFSQRMCDDLAEALADR---C---VTIDLLDITAE-IP---------------KELAGHFDFVLNDRL------IN 121 (261)
T ss_dssp EEEEESCHHHHHHHHHHTSSS---C---CEEEECCTTSC-CC---------------GGGTTCCSEEEEESC------GG
T ss_pred EEEEECCHHHHHHHHHHHHhc---c---ceeeeeecccc-cc---------------cccCCCccEEEEhhh------hH
Confidence 789999998888777665443 1 12222222210 00 001257999998643 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHH
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAE 137 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~ 137 (620)
.|.. .-....|.+..++| |||+|+.|..--...-+..++..
T Consensus 122 -------~~~~-------~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~ 162 (261)
T 3iv6_A 122 -------RFTT-------EEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEY 162 (261)
T ss_dssp -------GSCH-------HHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHH
T ss_pred -------hCCH-------HHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHH
Confidence 1221 22356788888899 99999987653333334444443
No 242
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=83.88 E-value=2 Score=43.49 Aligned_cols=82 Identities=9% Similarity=0.017 Sum_probs=56.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCC-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
+++.|+ +.-+....+++.+.+. .++.+..+|+.. + + ...||.|++-
T Consensus 194 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~---------------------~~~~D~v~~~--------- 240 (334)
T 2ip2_A 194 GVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E-V---------------------PSNGDIYLLS--------- 240 (334)
T ss_dssp EEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C-C---------------------CSSCSEEEEE---------
T ss_pred EEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C-C---------------------CCCCCEEEEc---------
Confidence 678888 8878888777777664 468888887744 2 0 1459999952
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.+...|.... ..++|.++.+.|+|||+|+-....+.
T Consensus 241 ----~vl~~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 241 ----RIIGDLDEAA-------SLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp ----SCGGGCCHHH-------HHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred ----hhccCCCHHH-------HHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 1222444322 27899999999999999988765543
No 243
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=83.51 E-value=3.1 Score=45.05 Aligned_cols=81 Identities=15% Similarity=0.032 Sum_probs=52.5
Q ss_pred EEEEcCChhHHHHH-------HHHHHHhC--CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcC
Q 007036 2 VIANDLDVQRCNLL-------IHQTKRMC--TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDV 72 (620)
Q Consensus 2 VvAnD~d~kR~~~L-------~~~~kRlg--~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDv 72 (620)
|++.|++..-+... ..+++++| ..|+.+...|+..-+. .+ ......||.|++..
T Consensus 269 V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~-~~----------------~~~~~~FDvIvvn~ 331 (433)
T 1u2z_A 269 SFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN-RV----------------AELIPQCDVILVNN 331 (433)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH-HH----------------HHHGGGCSEEEECC
T ss_pred EEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc-cc----------------ccccCCCCEEEEeC
Confidence 78999999877766 77888888 5789888766532110 00 00125699999753
Q ss_pred CCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 73 PCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 73 PCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
.+- .++ + ...|...++.|||||+||-+
T Consensus 332 ~l~-------~~d---------------~-~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 332 FLF-------DED---------------L-NKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TTC-------CHH---------------H-HHHHHHHHTTCCTTCEEEES
T ss_pred ccc-------ccc---------------H-HHHHHHHHHhCCCCeEEEEe
Confidence 220 011 1 23467888999999999875
No 244
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=82.72 E-value=1.6 Score=42.73 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=48.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++.-+.....+ .|+.+...|+..+|. ....||.|++-.. +.
T Consensus 59 v~gvD~s~~~~~~a~~~------~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~ 105 (261)
T 3ege_A 59 VYAVEPSIVMRQQAVVH------PQVEWFTGYAENLAL---------------------PDKSVDGVISILA------IH 105 (261)
T ss_dssp EEEECSCHHHHHSSCCC------TTEEEECCCTTSCCS---------------------CTTCBSEEEEESC------GG
T ss_pred EEEEeCCHHHHHHHHhc------cCCEEEECchhhCCC---------------------CCCCEeEEEEcch------Hh
Confidence 68999997433322111 178888888877552 1257999997422 11
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
.-++ ...+|.++.++|| ||+++..++.
T Consensus 106 ~~~~----------------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 106 HFSH----------------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp GCSS----------------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred hccC----------------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 1011 1478899999999 9999988875
No 245
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=81.62 E-value=2 Score=40.12 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=20.0
Q ss_pred HHHHHHHhhcccCCEEEEeecCC
Q 007036 104 QIAMRGISLLKVGGRIVYSTCSM 126 (620)
Q Consensus 104 ~IL~rAl~lLk~GG~LVYSTCSl 126 (620)
.+|.++.++|++||+++.++-..
T Consensus 111 ~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 111 AVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp HHHHHTGGGEEEEEEEEEEEECT
T ss_pred HHHHHHHHHcCCCCEEEEEeCCc
Confidence 78899999999999999987543
No 246
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=81.08 E-value=1.1 Score=48.43 Aligned_cols=76 Identities=11% Similarity=-0.038 Sum_probs=49.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|+++... ...+++.+...|+..+|... . .......||.|++|. .
T Consensus 250 V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~---~------------l~~~d~sFDlVisdg------s-- 297 (419)
T 3sso_A 250 IYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLD---R------------IARRYGPFDIVIDDG------S-- 297 (419)
T ss_dssp EEEEESSCCGG---------GCBTTEEEEECCTTCHHHHH---H------------HHHHHCCEEEEEECS------C--
T ss_pred EEEEECCHHHh---------hcCCCcEEEEecccccchhh---h------------hhcccCCccEEEECC------c--
Confidence 78899988741 24568888888887654210 0 000026799999863 1
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
.. | .-|.+.|..+.++|||||++|.+..
T Consensus 298 H~---~------------~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 298 HI---N------------AHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CC---H------------HHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred cc---c------------hhHHHHHHHHHHhcCCCeEEEEEec
Confidence 00 1 1245788999999999999998753
No 247
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=80.36 E-value=4.4 Score=40.26 Aligned_cols=87 Identities=8% Similarity=-0.055 Sum_probs=51.5
Q ss_pred EEEEcCChhHHHHHHHHHHHh-CCCcEEEE--ccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-CTANLIVT--NHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-g~~nv~vt--n~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG 78 (620)
+++.|.+..-+...++++.+. +.+++.+. ..++..++.-. ........||.|++=.
T Consensus 85 ~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------------~~~~~~~~fD~V~~~~------ 143 (292)
T 2aot_A 85 NEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRM---------------LEKKELQKWDFIHMIQ------ 143 (292)
T ss_dssp EEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHH---------------HTTTCCCCEEEEEEES------
T ss_pred EEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhh---------------ccccCCCceeEEEEee------
Confidence 389999998888877777653 55666554 33332211000 0000125799998521
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 79 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 79 tlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
++. |-+ + ..+.|.+..++|||||+++.++.+
T Consensus 144 ~l~--------~~~-d-------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 144 MLY--------YVK-D-------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CGG--------GCS-C-------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eee--------ecC-C-------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 111 111 1 145788899999999999998655
No 248
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=80.10 E-value=2.2 Score=43.13 Aligned_cols=23 Identities=30% Similarity=0.306 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhhcccCCEEEEe
Q 007036 100 SLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 100 ~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
..|.++|.+....|+|||.|+..
T Consensus 229 ~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 229 TTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEE
Confidence 35899999999999999999873
No 249
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=79.47 E-value=2.8 Score=44.34 Aligned_cols=50 Identities=12% Similarity=0.216 Sum_probs=43.8
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 73 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvP 73 (620)
|++.|+|+.=+...+.|+++.|.. ++.+.+.|+..++. ...||.|++|+|
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~----------------------~~~~D~Iv~NPP 310 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS----------------------EDEFGFIITNPP 310 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC----------------------SCBSCEEEECCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc----------------------CCCCcEEEECCC
Confidence 799999999999999999999986 79999999877642 146999999999
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=79.36 E-value=2.5 Score=44.98 Aligned_cols=51 Identities=12% Similarity=0.255 Sum_probs=43.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPC 74 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPC 74 (620)
|++.|+|+.=+...+.|+++.|..+ +.+.+.|+..++. ...||.|++|+|-
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~----------------------~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT----------------------EDEYGVVVANPPY 317 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC----------------------CCCSCEEEECCCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC----------------------CCCCCEEEECCCC
Confidence 8999999999999999999999874 8888899877642 1469999999995
No 251
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=79.35 E-value=6.1 Score=40.30 Aligned_cols=96 Identities=14% Similarity=0.049 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHhCC--CcEEEEccccCC-CCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccccCcccc
Q 007036 11 RCNLLIHQTKRMCT--ANLIVTNHEAQH-FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIW 87 (620)
Q Consensus 11 R~~~L~~~~kRlg~--~nv~vtn~Da~~-~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlrK~pdiw 87 (620)
+....+.++++.|. .++.+...|+.. +|.+ ....||.|.+|+- .
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~--------------------~~~~~d~vfIDaD-~------------ 219 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTA--------------------PIDTLAVLRMDGD-L------------ 219 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTC--------------------CCCCEEEEEECCC-S------------
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhC--------------------CCCCEEEEEEcCC-c------------
Confidence 56778899999997 689999998854 2221 1257999999962 0
Q ss_pred cccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhCCCceEEeeC
Q 007036 88 RKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 151 (620)
Q Consensus 88 ~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~~~~~eLvd~ 151 (620)
..--...|...+.+|++||.||.=-....|.+.+| |.+++++++-.+.+.++
T Consensus 220 -----------y~~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~A-v~Ef~~~~~i~~~i~~~ 271 (282)
T 2wk1_A 220 -----------YESTWDTLTNLYPKVSVGGYVIVDDYMMCPPCKDA-VDEYRAKFDIADELITI 271 (282)
T ss_dssp -----------HHHHHHHHHHHGGGEEEEEEEEESSCTTCHHHHHH-HHHHHHHTTCCSCCEEC
T ss_pred -----------cccHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHHH-HHHHHHhcCCceEEEEe
Confidence 01124567788999999999998776445766554 46777877644554444
No 252
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=78.99 E-value=6.9 Score=37.00 Aligned_cols=135 Identities=15% Similarity=0.092 Sum_probs=85.5
Q ss_pred hhHHHHHhHhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhcccCCCccEEEEceEee--EEEecCCCCCCCc
Q 007036 391 TIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKM--FERQTSREGNSAP 468 (620)
Q Consensus 391 ~~~~~I~~fYgi~~~Fp~~~~Lv~Rn~~g~~~k~IYyvS~~vk~il~~N~~~g~~lkii~~GvK~--F~rq~~~~~~~~~ 468 (620)
.+++.+..| + . +..+...+.|.. ..+|||++..+.+.++.. +.++++.|+-+ |...+++.
T Consensus 17 ~i~~~L~~y-~-~--~~~~~~~~~~~~----~~~Vy~v~~~~~~~~~~~-----~~~l~s~G~~~Gk~~~~~t~~----- 78 (166)
T 2p38_A 17 LILKEAEKY-G-E--LLHEFFCVVEGK----YRDVYAVNEEVWKIIEDI-----NMRPYSLGTFVGTIRVDENLV----- 78 (166)
T ss_dssp HHHHHHHTT-E-E--ECCCCEEEEESS----SEEEEEECHHHHHHTTTC-----CCCGGGTEEEEEEEEECTTSC-----
T ss_pred HHHHHHHHh-c-C--CCcccEEEEEcc----CcEEEEECcHHHHHhhcc-----CccceEEEEEEEEEEecccCC-----
Confidence 345556655 3 2 223334445553 489999999988875432 46778888543 32222332
Q ss_pred cceeeccCchhhhhhcccCcEEecCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEeCCCCCCCCCccccCC
Q 007036 469 CSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDAS 548 (620)
Q Consensus 469 C~~RI~qEGl~~l~p~i~kRiv~~~~~dl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~vl~~~~~~~~~~~~~~~~~~ 548 (620)
=.||++-+|+.+| +| .+..|.++..-.+.+|-..++.-+.+.+- . +..|.-|++++. +. .
T Consensus 79 ~kf~pti~~l~~l-~~-~k~kV~V~~~ae~~flyG~dV~k~gI~~~------~-~~~~~~VvV~~~-~~----------~ 138 (166)
T 2p38_A 79 EKFYPNLEFFSLI-KL-EKNYVILGPKASFLFTTGKDAPKEAVREI------K-WQGSKRVVVLND-LG----------D 138 (166)
T ss_dssp EEEEECHHHHTTE-EE-CSSEEEECHHHHHHHHTTCCBCGGGEEEE------E-CSSCSEEEEECT-TS----------C
T ss_pred CeEEEehHHhhhc-cc-cccEEEECCcceEeeecCCCcchhcceEE------e-ecCCCEEEEEEC-CC----------c
Confidence 2799999999999 76 56677788888888887766655444321 1 566778888864 22 2
Q ss_pred eEEEEEe----eccceeeE
Q 007036 549 TIAIGCW----KGRASLSV 563 (620)
Q Consensus 549 ~~~l~~W----rg~~Slnl 563 (620)
.+.+..+ +|+.-.|+
T Consensus 139 pLG~G~a~~s~~gkvv~n~ 157 (166)
T 2p38_A 139 IIGIGLINPKSDRRFIKNL 157 (166)
T ss_dssp EEEEEEECTTCSTTSEEEE
T ss_pred EEEEEEEEECCCCEEEEEc
Confidence 4778888 67654443
No 253
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=78.28 E-value=3.7 Score=43.61 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=59.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|.+. =+......++..|.. .|.+++.|...+.. +.+||.|++..- |.+.+
T Consensus 109 V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l----------------------pe~~DvivsE~~--~~~l~ 163 (376)
T 4hc4_A 109 VYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL----------------------PEQVDAIVSEWM--GYGLL 163 (376)
T ss_dssp EEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----------------------SSCEEEEECCCC--BTTBT
T ss_pred EEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC----------------------CccccEEEeecc--ccccc
Confidence 89999986 356666777777765 58888888766531 257999987532 22211
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC--hhccHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN--PVENEAV 134 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln--P~ENEaV 134 (620)
+. . .-..+|...-++|||||+++-+.|+++ |+|.+..
T Consensus 164 --~e--------~-------~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~l 202 (376)
T 4hc4_A 164 --HE--------S-------MLSSVLHARTKWLKEGGLLLPASAELFIVPISDQML 202 (376)
T ss_dssp --TT--------C-------SHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHH
T ss_pred --cc--------c-------hhhhHHHHHHhhCCCCceECCccceEEEEEeccchh
Confidence 11 0 012344444579999999999988864 7777544
No 254
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=77.16 E-value=1.6 Score=42.27 Aligned_cols=121 Identities=20% Similarity=0.262 Sum_probs=75.9
Q ss_pred hhHHHHHhHhcCCCCCCCCCceEeecCCCC-----cceEEEEeCHHHHHHHHhcccCCCccEEEEceEeeEEEecCCCCC
Q 007036 391 TIINSIKTFYGIDDSFQLSGQLVSRNGDTN-----RVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGN 465 (620)
Q Consensus 391 ~~~~~I~~fYgi~~~Fp~~~~Lv~Rn~~g~-----~~k~IYyvS~~vk~il~~N~~~g~~lkii~~GvK~F~rq~~~~~~ 465 (620)
.+++.+..|-|-+ . .+|+.| +++. +.+++||+|+.+.+.+++- .+.+++++|+.+ .+-. +.
T Consensus 11 ~vf~kL~~yiG~n--~---~~li~~-~~~~~~frl~~~rVyyv~~~i~~~a~~i----~r~~l~s~Gtc~-Gkft-k~-- 76 (188)
T 1sqw_A 11 VMFEKIAKYIGEN--L---QLLVDR-PDGTYCFRLHNDRVYYVSEKIMKLAANI----SGDKLVSLGTCF-GKFT-KT-- 76 (188)
T ss_dssp HHHHHHHHHHGGG--T---HHHHEE-TTEEEEEEEETTEEEEEEHHHHHTTTSS----CHHHHHHHSEEE-EEEC-TT--
T ss_pred HHHHHHHHHhccC--H---HHHhcC-CCCceEEEecCCEEEEECHHHHHHHhcC----CcCCeeEeeeEE-EEEe-cC--
Confidence 3466777786644 2 234433 3331 3589999999998876433 468899999965 4432 12
Q ss_pred CCccceeeccCchhhhhhcccCcEEecCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEeC
Q 007036 466 SAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSK 534 (620)
Q Consensus 466 ~~~C~~RI~qEGl~~l~p~i~kRiv~~~~~dl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~vl~~~~ 534 (620)
=.||++-+|+.+|.||-..|+ .+..+--..+|-..++.-..+.. .=+++..|--|+++..
T Consensus 77 ---gkF~L~It~l~~La~~~~~kV-~Vk~~~E~~flyG~nVfk~~V~~-----i~e~i~~~~~VvV~n~ 136 (188)
T 1sqw_A 77 ---HKFRLHVTALDYLAPYAKYKV-WIKPGAEQSFLYGNHVLKSGLGR-----ITENTSQYQGVVVYSM 136 (188)
T ss_dssp ---SCEEECGGGHHHHGGGCSCEE-EECHHHHHHHTTTCCEEGGGEEE-----ECTTCCTTCEEEEEET
T ss_pred ---CcEEEchhHHHHhhhccCcEE-EECCCceeeEEeccchhHHhhhh-----cCCCCCCCCEEEEEeC
Confidence 289999999999999965554 55554455556555543322211 1124556777777774
No 255
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=75.62 E-value=4.2 Score=44.19 Aligned_cols=79 Identities=13% Similarity=-0.003 Sum_probs=51.2
Q ss_pred EEEEcCChhHHHHHHHH-------HHHhCC--CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcC
Q 007036 2 VIANDLDVQRCNLLIHQ-------TKRMCT--ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDV 72 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~-------~kRlg~--~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDv 72 (620)
|++.|+++.-+.+-..+ ++.+|. .++.+...|+..+|.. .....||.|++-.
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~-------------------d~~~~aDVVf~Nn 260 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWR-------------------ERIANTSVIFVNN 260 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHH-------------------HHHHTCSEEEECC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccc-------------------cccCCccEEEEcc
Confidence 78999998666555544 345565 6899999998775410 0113689999865
Q ss_pred CCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEe
Q 007036 73 PCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 73 PCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYS 122 (620)
+|= .|+. ...|...++.|||||+||-+
T Consensus 261 ~~F-------~pdl----------------~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 261 FAF-------GPEV----------------DHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TTC-------CHHH----------------HHHHHHHHTTSCTTCEEEES
T ss_pred ccc-------CchH----------------HHHHHHHHHcCCCCcEEEEe
Confidence 431 1111 23345567899999999955
No 256
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=73.62 E-value=12 Score=41.40 Aligned_cols=126 Identities=13% Similarity=0.097 Sum_probs=68.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
+++.|++..=..+.+-++--.|.....|...|+...|... .....+||.||..||=++..-
T Consensus 257 i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~-----------------~~~~~~fD~Il~NPPf~~~~~-- 317 (530)
T 3ufb_A 257 IFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE-----------------MGDKDRVDVILTNPPFGGEEE-- 317 (530)
T ss_dssp EEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG-----------------CCGGGCBSEEEECCCSSCBCC--
T ss_pred hhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh-----------------hcccccceEEEecCCCCcccc--
Confidence 5778888765555555555455544445666665544211 011257999999999976521
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcc-------cCCEEEEeec--CCChhccHH-HHHHHHHhCCCceEEeeC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK-------VGGRIVYSTC--SMNPVENEA-VVAEILRKCEGSVELVDV 151 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk-------~GG~LVYSTC--SlnP~ENEa-VV~~~L~~~~~~~eLvd~ 151 (620)
.+.+..+. ........+...+.+.+.+|| +||++.+.+= .|..--.+. +=.++|+++. -..+|.+
T Consensus 318 --~~~~~~~~--~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~~-l~aII~L 392 (530)
T 3ufb_A 318 --KGILGNFP--EDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFN-LHTIVRL 392 (530)
T ss_dssp --HHHHTTSC--GGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHSE-EEEEEEC
T ss_pred --ccccccCc--hhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcCE-EEEEEEC
Confidence 11111111 111223445667777887776 6999887653 243222233 4455666542 1235544
No 257
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=72.64 E-value=5.2 Score=41.52 Aligned_cols=59 Identities=20% Similarity=0.140 Sum_probs=45.7
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 142 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~ 142 (620)
..||.|.+|+= .-+|||++|.. .++...++++++||+++==||+ ..|...|...
T Consensus 185 ~~~Da~flDgF-----sP~kNPeLWs~--------------e~f~~l~~~~~pgg~laTYtaa-------g~VRR~L~~a 238 (308)
T 3vyw_A 185 FKADAVFHDAF-----SPYKNPELWTL--------------DFLSLIKERIDEKGYWVSYSSS-------LSVRKSLLTL 238 (308)
T ss_dssp CCEEEEEECCS-----CTTTSGGGGSH--------------HHHHHHHTTEEEEEEEEESCCC-------HHHHHHHHHT
T ss_pred cceeEEEeCCC-----CcccCcccCCH--------------HHHHHHHHHhCCCcEEEEEeCc-------HHHHHHHHHC
Confidence 46999999962 22799999743 6888899999999998844554 7899999998
Q ss_pred CCceE
Q 007036 143 EGSVE 147 (620)
Q Consensus 143 ~~~~e 147 (620)
|-.|+
T Consensus 239 GF~V~ 243 (308)
T 3vyw_A 239 GFKVG 243 (308)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 74443
No 258
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=72.62 E-value=14 Score=42.13 Aligned_cols=89 Identities=11% Similarity=0.121 Sum_probs=60.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|++.|+|+.=+.+-+.|+++.|..+ +.+...|+..+..- .....||.|++++|= |.
T Consensus 259 i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~-------------------~~~~~~d~Iv~NPPY-G~--- 315 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-------------------LPKGPYGTVLSNPPY-GE--- 315 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS-------------------CTTCCCCEEEECCCC-CC---
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc-------------------cccCCCCEEEeCCCc-cc---
Confidence 7899999999999999999999876 88999999775310 001369999999996 21
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
++. .-..+..+=. -|.+.++-+.+||+++.-|-
T Consensus 316 --------Rlg--~~~~l~~ly~-~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 316 --------RLD--SEPALIALHS-LLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp -------------CCHHHHHHHH-HHHHHHHHHCTTCEEEEEES
T ss_pred --------ccc--chhHHHHHHH-HHHHHHHhhCCCCeEEEEeC
Confidence 111 1112222222 35566676778998776543
No 259
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=71.09 E-value=5.8 Score=42.37 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=60.3
Q ss_pred EEEEcCChhHHHHHHHHHHHh-----C---CCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRM-----C---TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 73 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRl-----g---~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvP 73 (620)
|.+.|+|+.=+.+-+.-+..+ . .+++.+...||..|-. . ......+||.|++|++
T Consensus 231 V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~----~-------------~~~~~~~yDvIIvDl~ 293 (381)
T 3c6k_A 231 VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLK----R-------------YAKEGREFDYVINDLT 293 (381)
T ss_dssp EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHH----H-------------HHHHTCCEEEEEEECC
T ss_pred eEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHH----h-------------hhhccCceeEEEECCC
Confidence 567788876555444332111 1 1347777777765421 0 0011257999999986
Q ss_pred CccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEE-eecCCChhccHHHHHHHHHhC
Q 007036 74 CSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY-STCSMNPVENEAVVAEILRKC 142 (620)
Q Consensus 74 CSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVY-STCSlnP~ENEaVV~~~L~~~ 142 (620)
=...++ .| ....-.-..++.+..+.+.|++||.+|- +.|-..+..- ..+...|++.
T Consensus 294 D~~~s~---~p---------~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~-~~i~~tl~~v 350 (381)
T 3c6k_A 294 AVPIST---SP---------EEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEAL-SLYEEQLGRL 350 (381)
T ss_dssp SSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHH-HHHHHHHTTS
T ss_pred CCcccC---cc---------cCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHH-HHHHHHHHHh
Confidence 321111 11 1112234567889999999999999885 5565544322 3334444443
No 260
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=70.86 E-value=2.8 Score=42.17 Aligned_cols=53 Identities=13% Similarity=-0.133 Sum_probs=40.9
Q ss_pred EEEEcCChhHHHHHHHHHHHhC--------C-CcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMC--------T-ANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDV 72 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg--------~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDv 72 (620)
|++.|+++..+.++.+++++.. . .++.+.+.|+..+-.. ....||.|++|+
T Consensus 113 V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~--------------------~~~~fDvV~lDP 172 (258)
T 2oyr_A 113 VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD--------------------ITPRPQVVYLDP 172 (258)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT--------------------CSSCCSEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh--------------------CcccCCEEEEcC
Confidence 8999999999999999998763 3 4788999988764210 013599999999
Q ss_pred CC
Q 007036 73 PC 74 (620)
Q Consensus 73 PC 74 (620)
|=
T Consensus 173 ~y 174 (258)
T 2oyr_A 173 MF 174 (258)
T ss_dssp CC
T ss_pred CC
Confidence 84
No 261
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=68.54 E-value=26 Score=34.74 Aligned_cols=94 Identities=10% Similarity=-0.041 Sum_probs=53.0
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|++.|.++.=+...+.++. ...++.+...|+...+.+.-.... . .......||.|++= +++.
T Consensus 107 v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~--------~--~~~d~~~~d~v~~~------~vlh 168 (274)
T 2qe6_A 107 VVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDV--------R--RMIDFSRPAAIMLV------GMLH 168 (274)
T ss_dssp EEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHH--------H--HHCCTTSCCEEEET------TTGG
T ss_pred EEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchh--------h--ccCCCCCCEEEEEe------chhh
Confidence 7899999765555554442 235788888887653210000000 0 00011357877753 1111
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
. |... -...+|.+..+.|+|||+|+.++....
T Consensus 169 ~-------~~d~-------~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 169 Y-------LSPD-------VVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp G-------SCTT-------THHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred h-------CCcH-------HHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 1 1111 136789999999999999999987653
No 262
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=66.68 E-value=8.2 Score=39.45 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=40.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 73 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvP 73 (620)
|+|.|+|+.-+..+..++. +.+|+.+.+.|+..++. ....||+|++..|
T Consensus 75 V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~---------------------~~~~fD~Iv~NlP 123 (295)
T 3gru_A 75 VYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDL---------------------NKLDFNKVVANLP 123 (295)
T ss_dssp EEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCG---------------------GGSCCSEEEEECC
T ss_pred EEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCc---------------------ccCCccEEEEeCc
Confidence 7999999999999998887 45789999999987642 1145999998877
No 263
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=66.36 E-value=14 Score=37.90 Aligned_cols=75 Identities=15% Similarity=0.014 Sum_probs=52.7
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
++|.|+|..=+..+.+++.++|+. ..+...|...-+ ....||.||+=
T Consensus 159 y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~----------------------p~~~~DvaL~l---------- 205 (281)
T 3lcv_B 159 YIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR----------------------LDEPADVTLLL---------- 205 (281)
T ss_dssp EEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC----------------------CCSCCSEEEET----------
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC----------------------CCCCcchHHHH----------
Confidence 789999999999999999999987 455555543211 12678999851
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEE
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 120 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LV 120 (620)
.-+.-|-..|+..+.+.++.|++||.+|
T Consensus 206 -----------kti~~Le~q~kg~g~~ll~aL~~~~vvV 233 (281)
T 3lcv_B 206 -----------KTLPCLETQQRGSGWEVIDIVNSPNIVV 233 (281)
T ss_dssp -----------TCHHHHHHHSTTHHHHHHHHSSCSEEEE
T ss_pred -----------HHHHHhhhhhhHHHHHHHHHhCCCCEEE
Confidence 1233344444545568999999988766
No 264
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=60.25 E-value=1.6 Score=44.80 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=39.5
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 73 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvP 73 (620)
++.+|.+++-+..|+.|++. ..++.|.+.|+..+-... .....+||.|++|+|
T Consensus 116 ~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l-----------------~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 116 LYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNAL-----------------LPPPEKRGLIFIDPS 168 (283)
T ss_dssp EEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHH-----------------CSCTTSCEEEEECCC
T ss_pred EEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHh-----------------cCCCCCccEEEECCC
Confidence 68899999999999999976 467999999974421100 011256999999999
No 265
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=57.22 E-value=2.6 Score=42.13 Aligned_cols=54 Identities=15% Similarity=-0.065 Sum_probs=39.1
Q ss_pred EEEEcCCh-------hHHHHHHHHHHHhCCCc-EEEEccccCCCCCCccCCCCCcCCCcCccccccccc--CCccEEEEc
Q 007036 2 VIANDLDV-------QRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQ--LLFDRVLCD 71 (620)
Q Consensus 2 VvAnD~d~-------kR~~~L~~~~kRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~--~~FDrILlD 71 (620)
|+|+|+++ .-+....++++..+..+ +.+.+.|+..+.. .... ..||.|++|
T Consensus 108 V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~-------------------~~~~~~~~fD~V~~d 168 (258)
T 2r6z_A 108 VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP-------------------ALVKTQGKPDIVYLD 168 (258)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH-------------------HHHHHHCCCSEEEEC
T ss_pred EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH-------------------hhhccCCCccEEEEC
Confidence 79999999 77777777777767655 8899988865311 0001 469999999
Q ss_pred CCC
Q 007036 72 VPC 74 (620)
Q Consensus 72 vPC 74 (620)
+|=
T Consensus 169 P~~ 171 (258)
T 2r6z_A 169 PMY 171 (258)
T ss_dssp CCC
T ss_pred CCC
Confidence 863
No 266
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=56.83 E-value=13 Score=36.65 Aligned_cols=55 Identities=11% Similarity=0.148 Sum_probs=35.8
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
..||.|++|+|=-.. . + -|..+. ........-..+|..+.++|++||.|+...|.
T Consensus 22 ~~vdlI~~DPPY~~~-~--~---~~d~~~--~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 22 KSVQLAVIDPPYNLS-K--A---DWDSFD--SHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp TCEEEEEECCCCSSC-S--S---GGGCCS--SHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH
T ss_pred cccCEEEECCCCCCC-c--c---cccccC--CHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc
Confidence 579999999995321 0 0 122221 22334445567888888999999998887654
No 267
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=56.12 E-value=16 Score=32.88 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=17.9
Q ss_pred HHHHHHHHhhcccCCEEEEe
Q 007036 103 VQIAMRGISLLKVGGRIVYS 122 (620)
Q Consensus 103 ~~IL~rAl~lLk~GG~LVYS 122 (620)
.++|.++.+.|||||+++.+
T Consensus 81 ~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEE
Confidence 56899999999999999984
No 268
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=55.32 E-value=28 Score=35.18 Aligned_cols=75 Identities=16% Similarity=-0.009 Sum_probs=53.1
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
++|.|+|..=+..+.+++.+.| .+..+...|...-+. ...||.||+=
T Consensus 129 y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~~----------------------~~~~DvvLll---------- 175 (253)
T 3frh_A 129 VWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAPP----------------------AEAGDLALIF---------- 175 (253)
T ss_dssp EEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSCC----------------------CCBCSEEEEE----------
T ss_pred EEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCCC----------------------CCCcchHHHH----------
Confidence 6899999999999999999998 566666666644221 2568999751
Q ss_pred cCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEE
Q 007036 82 KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 120 (620)
Q Consensus 82 K~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LV 120 (620)
.-+.-|...|..-+.+.++.|+++|.+|
T Consensus 176 -----------k~lh~LE~q~~~~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 176 -----------KLLPLLEREQAGSAMALLQSLNTPRMAV 203 (253)
T ss_dssp -----------SCHHHHHHHSTTHHHHHHHHCBCSEEEE
T ss_pred -----------HHHHHhhhhchhhHHHHHHHhcCCCEEE
Confidence 1233455556666668888899976555
No 269
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=54.09 E-value=14 Score=37.68 Aligned_cols=35 Identities=26% Similarity=0.142 Sum_probs=27.1
Q ss_pred CccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 64 LFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 64 ~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
.||.|.+|+.... | ..+|....++|||||++|...
T Consensus 151 ~fD~v~~d~sf~s---------------------l----~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 151 LPSFASIDVSFIS---------------------L----NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp CCSEEEECCSSSC---------------------G----GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEEeeHhh---------------------H----HHHHHHHHHHcCcCCEEEEEE
Confidence 4999999975321 1 457888999999999999863
No 270
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=51.84 E-value=15 Score=41.24 Aligned_cols=59 Identities=20% Similarity=0.250 Sum_probs=43.2
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 142 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~ 142 (620)
..||.|++|+-. -+|||++|.. .++.+.++++++||++..-||. ..|...|.+.
T Consensus 178 ~~~d~~~~D~f~-----p~~np~~w~~--------------~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~a 231 (676)
T 3ps9_A 178 QKVDAWFLDGFA-----PAKNPDMWTQ--------------NLFNAMARLARPGGTLATFTSA-------GFVRRGLQDA 231 (676)
T ss_dssp TCEEEEEECCSC-----GGGCGGGSCH--------------HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHH
T ss_pred CcccEEEECCCC-----CcCChhhhhH--------------HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 569999999843 2589998743 4677778899999987755555 4678888877
Q ss_pred CCceE
Q 007036 143 EGSVE 147 (620)
Q Consensus 143 ~~~~e 147 (620)
+-.++
T Consensus 232 Gf~v~ 236 (676)
T 3ps9_A 232 GFTMQ 236 (676)
T ss_dssp TCEEE
T ss_pred CeEEE
Confidence 64433
No 271
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=51.30 E-value=11 Score=37.81 Aligned_cols=60 Identities=15% Similarity=0.075 Sum_probs=33.5
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeec
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 124 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTC 124 (620)
..||.|++|+|=-........++.+.. ..........-..++..+.++||+||.|+....
T Consensus 39 ~s~DlIvtdPPY~~~~~y~~~~~~~~~--~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 39 ASVHLVVTSPPYWTLKRYEDTPGQLGH--IEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp TCEEEEEECCCCCCCC-------CCHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceeEEEECCCCCCccccCCChhhhcc--cccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 579999999996433222222221110 001111222335688899999999999877654
No 272
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=50.27 E-value=45 Score=34.24 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=26.2
Q ss_pred ccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCCh
Q 007036 87 WRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 128 (620)
Q Consensus 87 w~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP 128 (620)
...|...+. .+||.++.+.|+|||+|+-.-.-+.+
T Consensus 254 lh~~~d~~~-------~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 254 LHDWADGKC-------SHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp GGGSCHHHH-------HHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred cccCCHHHH-------HHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 345665544 68999999999999999877655544
No 273
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=48.04 E-value=19 Score=36.83 Aligned_cols=55 Identities=13% Similarity=0.013 Sum_probs=37.4
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
..||.|++|+|=-.... ..|...........-..+|..+.++||+||.|+.....
T Consensus 32 ~svDlI~tDPPY~~~~~--------~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 32 ESISLVMTSPPFALQRK--------KEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SCEEEEEECCCCSSSCS--------CSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCeeEEEECCCCCCCcc--------cccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 57999999999643211 02222233445556678888899999999998886654
No 274
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=46.89 E-value=23 Score=34.35 Aligned_cols=35 Identities=14% Similarity=-0.069 Sum_probs=27.4
Q ss_pred CccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEee
Q 007036 64 LFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 123 (620)
Q Consensus 64 ~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYST 123 (620)
.||.+.+|+..+.. ..+|..+.++|||||+++..+
T Consensus 103 ~~d~~~~D~v~~~l-------------------------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 103 RPSFTSIDVSFISL-------------------------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEEEEhhhH-------------------------HHHHHHHHHhccCCCEEEEEE
Confidence 36888888775541 458889999999999999854
No 275
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=46.25 E-value=24 Score=39.67 Aligned_cols=59 Identities=22% Similarity=0.236 Sum_probs=43.0
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHhC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 142 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~~ 142 (620)
..||.|++|.-.- .|||++|. ..++...++++++||++..-||. ..|...|.+.
T Consensus 170 ~~~da~flD~f~p-----~~np~~w~--------------~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~a 223 (689)
T 3pvc_A 170 NQVDAWFLDGFAP-----AKNPDMWN--------------EQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQA 223 (689)
T ss_dssp TCEEEEEECSSCC-------CCTTCS--------------HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHT
T ss_pred CceeEEEECCCCC-----CCChhhhh--------------HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 5699999998532 48999873 34667778899999998877776 4678888887
Q ss_pred CCceE
Q 007036 143 EGSVE 147 (620)
Q Consensus 143 ~~~~e 147 (620)
+..+.
T Consensus 224 Gf~~~ 228 (689)
T 3pvc_A 224 GFNVT 228 (689)
T ss_dssp TCEEE
T ss_pred CeEEE
Confidence 64443
No 276
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=44.01 E-value=19 Score=36.99 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=39.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSG 76 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSG 76 (620)
|+|.|.|+.=+....+ ++. .++.+.+.++..++.. +. ......||.||+|-..|.
T Consensus 47 VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~-L~---------------~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 47 VIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRH-LA---------------ALGVERVDGILADLGVSS 101 (285)
T ss_dssp EEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHH-HH---------------HTTCSCEEEEEEECSCCH
T ss_pred EEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHH-HH---------------HcCCCCcCEEEeCCcccc
Confidence 8999999987776665 433 6899999988876532 10 001146999999999887
No 277
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=43.76 E-value=8 Score=40.43 Aligned_cols=23 Identities=17% Similarity=0.101 Sum_probs=19.8
Q ss_pred HHHHHHHHhhcccCCEEEEeecC
Q 007036 103 VQIAMRGISLLKVGGRIVYSTCS 125 (620)
Q Consensus 103 ~~IL~rAl~lLk~GG~LVYSTCS 125 (620)
..+|..+.++|||||+++.++-.
T Consensus 188 ~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 188 QSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEEeCC
Confidence 67889999999999999987644
No 278
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=43.72 E-value=3.5 Score=40.19 Aligned_cols=54 Identities=15% Similarity=0.237 Sum_probs=37.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 78 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdG 78 (620)
|+|.|+|+.-+..+.++++ +..++.+.+.|+..++.. ....| .|++++|-....
T Consensus 54 v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~--------------------~~~~f-~vv~n~Py~~~~ 107 (245)
T 1yub_A 54 VTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFP--------------------NKQRY-KIVGNIPYHLST 107 (245)
T ss_dssp EEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCC--------------------CSSEE-EEEEECCSSSCH
T ss_pred EEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcc--------------------cCCCc-EEEEeCCccccH
Confidence 6788888877766665554 356888888888776520 01358 899999976543
No 279
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=42.95 E-value=22 Score=36.72 Aligned_cols=75 Identities=13% Similarity=0.153 Sum_probs=48.8
Q ss_pred CCccEEEEcCCCccccccccCcccccccC-cchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWN-VGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~-~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
.++|.||+|.-=.-.|. ++. -.+-..+ +|. ++.-|++.|+|||.+|--.=-..-..-|.++..+.+.
T Consensus 205 ~k~DvV~SDMApn~sGh---------~yqQC~DHari--i~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~ 272 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYH---------HYQQCEDHAIK--LSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQ 272 (320)
T ss_dssp CCEEEEEEECCCCCCSC---------HHHHHHHHHHH--HHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred CcCCEEEEcCCCCCCCc---------cccccchHHHH--HHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHh
Confidence 56999999975444442 111 0122222 233 8999999999999999877777755668888887766
Q ss_pred CCCceEEee
Q 007036 142 CEGSVELVD 150 (620)
Q Consensus 142 ~~~~~eLvd 150 (620)
+. .++.+.
T Consensus 273 F~-~Vr~vK 280 (320)
T 2hwk_A 273 FK-FSRVCK 280 (320)
T ss_dssp EE-EEEEEC
T ss_pred cc-eeeeeC
Confidence 53 344443
No 280
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=42.83 E-value=26 Score=35.93 Aligned_cols=71 Identities=17% Similarity=0.138 Sum_probs=49.5
Q ss_pred cCCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 62 QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 62 ~~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
-.+||.|.|++. |=.|+-.. +.-..-+..-..|-..|+..|+|||.+|-..--+.-.--|.||.++-++
T Consensus 209 ~grYDlVfvNv~-----TpyR~HHY------QQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARk 277 (324)
T 3trk_A 209 LGRYDLVVINIH-----TPFRIHHY------QQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRK 277 (324)
T ss_dssp GCCEEEEEEECC-----CCCCSSHH------HHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred CCceeEEEEecC-----CccccchH------HHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhh
Confidence 378999999974 32332211 1111111122234568899999999999999999999999999998877
Q ss_pred CC
Q 007036 142 CE 143 (620)
Q Consensus 142 ~~ 143 (620)
+.
T Consensus 278 F~ 279 (324)
T 3trk_A 278 FR 279 (324)
T ss_dssp EE
T ss_pred he
Confidence 63
No 281
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=42.76 E-value=8.5 Score=27.64 Aligned_cols=8 Identities=50% Similarity=1.244 Sum_probs=7.3
Q ss_pred EeecCCCh
Q 007036 121 YSTCSMNP 128 (620)
Q Consensus 121 YSTCSlnP 128 (620)
|+|||+.|
T Consensus 32 y~~Cs~lP 39 (39)
T 2hlg_A 32 YRTCNLLP 39 (39)
T ss_dssp EEEEESCC
T ss_pred ceeeccCC
Confidence 99999976
No 282
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=41.64 E-value=20 Score=37.70 Aligned_cols=65 Identities=12% Similarity=0.176 Sum_probs=40.1
Q ss_pred CEEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 1 MVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 1 ~VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
.|+|+|+|+.-+..+.+|. ++..+.+.|...+..-.+. ........+|.|+.++||-|--..
T Consensus 26 ~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~-------------~~~~~~~~~D~i~ggpPCQ~fS~a 87 (376)
T 3g7u_A 26 VKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIK-------------GFFKNDMPIDGIIGGPPCQGFSSI 87 (376)
T ss_dssp EEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHH-------------HHHCSCCCCCEEEECCCCCTTC--
T ss_pred EEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHH-------------hhcccCCCeeEEEecCCCCCcccc
Confidence 3789999999999988774 4555667777665321000 000012569999999999988776
Q ss_pred ccC
Q 007036 81 RKA 83 (620)
Q Consensus 81 rK~ 83 (620)
.+.
T Consensus 88 g~~ 90 (376)
T 3g7u_A 88 GKG 90 (376)
T ss_dssp ---
T ss_pred cCC
Confidence 554
No 283
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=36.37 E-value=39 Score=34.82 Aligned_cols=57 Identities=12% Similarity=0.034 Sum_probs=40.0
Q ss_pred CEEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 1 MVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 1 ~VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
.|+|+|+|+.-+..+.+|..... +.|...+..- ....+|.|+.++||-+--..
T Consensus 35 ~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~--------------------~~~~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 35 CVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEK--------------------TIPDHDILCAGFPCQAFSIS 87 (327)
T ss_dssp EEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGG--------------------GSCCCSEEEEECCCTTTCTT
T ss_pred EEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHh--------------------hCCCCCEEEECCCCCCcchh
Confidence 37899999999999998864321 4555443210 11358999999999998777
Q ss_pred ccCc
Q 007036 81 RKAP 84 (620)
Q Consensus 81 rK~p 84 (620)
.+..
T Consensus 88 g~~~ 91 (327)
T 2c7p_A 88 GKQK 91 (327)
T ss_dssp SCCC
T ss_pred cccC
Confidence 6543
No 284
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=35.27 E-value=16 Score=37.78 Aligned_cols=59 Identities=15% Similarity=0.184 Sum_probs=33.6
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCccccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLR 81 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtlr 81 (620)
|+|+|+|..-+..+.+|.. +..+.+.|...+..- ......+|.|+.++||-+-.+..
T Consensus 29 v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~------------------~~~~~~~D~l~~gpPCq~fS~ag 85 (343)
T 1g55_A 29 VAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLE------------------EFDRLSFDMILMSPPCQPFTRIG 85 (343)
T ss_dssp EEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHH------------------HHHHHCCSEEEECCC--------
T ss_pred EEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHh------------------HcCcCCcCEEEEcCCCcchhhcC
Confidence 7999999999999988863 333556666554210 00012689999999999888775
Q ss_pred cC
Q 007036 82 KA 83 (620)
Q Consensus 82 K~ 83 (620)
+.
T Consensus 86 ~~ 87 (343)
T 1g55_A 86 RQ 87 (343)
T ss_dssp --
T ss_pred Cc
Confidence 44
No 285
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=31.77 E-value=64 Score=31.87 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=30.3
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCCcEEEEccccCCCC
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 38 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~nv~vtn~Da~~~p 38 (620)
|+|.|+|..-+..+.+++.. ..++.+.+.|+..++
T Consensus 54 V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 54 LALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFD 88 (255)
T ss_dssp EEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCC
T ss_pred EEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCC
Confidence 79999999999999887765 578999999998875
No 286
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=31.27 E-value=66 Score=36.23 Aligned_cols=69 Identities=19% Similarity=0.279 Sum_probs=48.3
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHH-HHHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQ-VQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ-~~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
.+||.|++++. |-.|+-.. +.-.. |..- ..|-..|+.+|+|||.+|--.--+.-.--|.||.++-++
T Consensus 220 ~ryDlvfvn~~-----t~yr~HHy------qQCeD-Ha~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRk 287 (670)
T 4gua_A 220 ARYDLVFINIG-----TKYRNHHF------QQCED-HAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARK 287 (670)
T ss_dssp CCEEEEEECCC-----CCCCSCHH------HHHHH-HHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHT
T ss_pred CcccEEEEecC-----CCcccchH------HHHHH-HHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhh
Confidence 58999999874 22222111 11111 2222 234468999999999999999999999999999999888
Q ss_pred CC
Q 007036 142 CE 143 (620)
Q Consensus 142 ~~ 143 (620)
+.
T Consensus 288 F~ 289 (670)
T 4gua_A 288 FV 289 (670)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 287
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=31.19 E-value=47 Score=34.06 Aligned_cols=53 Identities=13% Similarity=0.108 Sum_probs=34.2
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCCC
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
..||.|++|+|=-.. .+-|. ....+...-..+|..+.++|++||.|+.. |+-+
T Consensus 57 ~svDlI~tDPPY~~~------~d~~~-----~~~~~~~~~~~~l~~~~rvLk~~G~i~i~-~~~~ 109 (319)
T 1eg2_A 57 DSVQLIICDPPYNIM------LADWD-----DHMDYIGWAKRWLAEAERVLSPTGSIAIF-GGLQ 109 (319)
T ss_dssp TCEEEEEECCCSBCC------GGGGG-----TCSSHHHHHHHHHHHHHHHEEEEEEEEEE-ECSC
T ss_pred CCcCEEEECCCCCCC------CCCcc-----CHHHHHHHHHHHHHHHHHHcCCCeEEEEE-cCcc
Confidence 579999999996322 12222 12233444567777888999999887665 5543
No 288
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=31.01 E-value=42 Score=34.21 Aligned_cols=35 Identities=34% Similarity=0.583 Sum_probs=27.3
Q ss_pred HHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 104 QIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 104 ~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
+.|..|+.+|+|||+|+- =|++..|+- +|..+++.
T Consensus 226 ~~l~~~~~~l~~ggr~~v--isfhsledr-~vk~~~~~ 260 (301)
T 1m6y_A 226 EFLKKAEDLLNPGGRIVV--ISFHSLEDR-IVKETFRN 260 (301)
T ss_dssp HHHHHGGGGEEEEEEEEE--EESSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEE--EecCcHHHH-HHHHHhhc
Confidence 567789999999999964 467888874 56777775
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=26.24 E-value=20 Score=36.70 Aligned_cols=35 Identities=29% Similarity=0.538 Sum_probs=27.0
Q ss_pred HHHHHHHhhcccCCEEEEeecCCChhccHHHHHHHHHh
Q 007036 104 QIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 104 ~IL~rAl~lLk~GG~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
+.|..|..+|+|||+|+- =|++..|+- +|..+++.
T Consensus 214 ~~L~~a~~~L~~gGrl~v--isfHSLEDR-iVK~~~~~ 248 (285)
T 1wg8_A 214 EFLEQAAEVLAPGGRLVV--IAFHSLEDR-VVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHEEEEEEEEE--EECSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEE--EecCcHHHH-HHHHHHHh
Confidence 567788999999999964 568888875 55777765
No 290
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=24.38 E-value=1e+02 Score=31.10 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=21.3
Q ss_pred HHHHHHHHhhcccCCEEEEeecCCC
Q 007036 103 VQIAMRGISLLKVGGRIVYSTCSMN 127 (620)
Q Consensus 103 ~~IL~rAl~lLk~GG~LVYSTCSln 127 (620)
.++|.++.+.|||||+|+.....+.
T Consensus 266 ~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 266 VRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccC
Confidence 6899999999999999988765443
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=22.59 E-value=1.1e+02 Score=31.46 Aligned_cols=65 Identities=11% Similarity=0.012 Sum_probs=42.4
Q ss_pred CCccEEEEcCCCccccccccCcccccccCcchhhhhHHHHHHHHHHHHhhcccC-CEEEEeecCCChhccHHHHHHHHHh
Q 007036 63 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG-GRIVYSTCSMNPVENEAVVAEILRK 141 (620)
Q Consensus 63 ~~FDrILlDvPCSGdGtlrK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~G-G~LVYSTCSlnP~ENEaVV~~~L~~ 141 (620)
..||.||+|.-.+ +|. |... |..|..||.-|.+.|++| |.+|--.--.+-.+..+.+..+-..
T Consensus 146 ~~~DlVlsD~APn-sG~----------~~~D-----~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~ 209 (300)
T 3eld_A 146 EPSDTLLCDIGES-SSN----------PLVE-----RDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLR 209 (300)
T ss_dssp CCCSEEEECCCCC-CSS----------HHHH-----HHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHH
T ss_pred CCcCEEeecCcCC-CCC----------HHHH-----HHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHh
Confidence 5799999999888 773 1111 123444488899999999 9988764443244555555555555
Q ss_pred CC
Q 007036 142 CE 143 (620)
Q Consensus 142 ~~ 143 (620)
+.
T Consensus 210 F~ 211 (300)
T 3eld_A 210 FG 211 (300)
T ss_dssp HC
T ss_pred CC
Confidence 54
No 292
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=21.59 E-value=57 Score=37.65 Aligned_cols=101 Identities=12% Similarity=0.091 Sum_probs=66.4
Q ss_pred EEEEcCChhHHHHHHHHHHHhCCC-cEEEEccccCCCCCCccCCCCCcCCCcCcccccccccCCccEEEEcCCCcccccc
Q 007036 2 VIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 80 (620)
Q Consensus 2 VvAnD~d~kR~~~L~~~~kRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~FDrILlDvPCSGdGtl 80 (620)
|+|.|.++.=...|+...+ -|.. .|.|+..|...+.. +. + .....++|.|+..-- |
T Consensus 449 VyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~l---p~--------~-----~~~~ekVDIIVSElm----G-- 505 (745)
T 3ua3_A 449 LYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPG---IA--------K-----DRGFEQPDIIVSELL----G-- 505 (745)
T ss_dssp EEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHH---HH--------H-----HTTCCCCSEEEECCC----B--
T ss_pred EEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccc---cc--------c-----cCCCCcccEEEEecc----c--
Confidence 7999999866666665544 4443 48888888876521 00 0 001367888876432 1
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHHhhcccCCEEEEeecCC--ChhccHHHHHHHH
Q 007036 81 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAVVAEIL 139 (620)
Q Consensus 81 rK~pdiw~~w~~~~~~~L~~lQ~~IL~rAl~lLk~GG~LVYSTCSl--nP~ENEaVV~~~L 139 (620)
--.+.+++.+.|..+-++|||||+++=+.|++ .|++.+..-+.+.
T Consensus 506 --------------sfl~nEL~pe~Ld~v~r~Lkp~Gi~iP~~~t~ylaPi~~~~l~~~v~ 552 (745)
T 3ua3_A 506 --------------SFGDNELSPECLDGVTGFLKPTTISIPQKYTSYVKPIMSTHIHQTIK 552 (745)
T ss_dssp --------------TTBGGGSHHHHHHTTGGGSCTTCEEESCEEEEEEEEEECHHHHHHHH
T ss_pred --------------cccchhccHHHHHHHHHhCCCCcEEECCccEEEEEEecCHHHHHHHH
Confidence 11245566778888889999999999776664 5899988766554
Done!