Your job contains 1 sequence.
>007039
MHDVIHVVAVSIATEERMFNVPNVADLEKKMEETIQKDPIAISLPHRDIQELPERLQCPN
LQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCEL
ADIAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQL
EELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIR
IGDGPEDEFDPLLVKSEASRLMMLKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSV
VHELDDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQ
LREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPT
TQGFIEINAEDDPVHQVTFPRLEELELVSLTNIKKLWSDQFQGIYCCQNLTKVTVWSCHR
LKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPKLS
SFASPEDVIHTEMQPQSLFDEKVRLPSLEVLHISEADKLRKIWHHQLASKSFSKLKKLKI
SGCNNLLNIFPPLVRLLYSF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007039
(620 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA... 146 3.1e-13 2
TAIR|locus:2136447 - symbol:AT4G27190 species:3702 "Arabi... 143 4.9e-13 2
TAIR|locus:2131689 - symbol:AT4G27220 species:3702 "Arabi... 192 2.1e-11 1
TAIR|locus:2205824 - symbol:AT1G27170 species:3702 "Arabi... 120 5.6e-05 2
TAIR|locus:2175075 - symbol:AT5G41750 species:3702 "Arabi... 99 0.00019 2
TAIR|locus:2008510 - symbol:AT1G61190 "AT1G61190" species... 91 0.00021 2
MGI|MGI:1333744 - symbol:Gp1ba "glycoprotein 1b, alpha po... 123 0.00047 1
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 99 0.00085 2
>TAIR|locus:2005517 [details] [associations]
symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
hypersensitive response" evidence=IMP] [GO:0016045 "detection of
bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
"regulation of immune response" evidence=RCA] [GO:0050832 "defense
response to fungus" evidence=RCA] [GO:0051707 "response to other
organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
Length = 909
Score = 146 (56.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 52/196 (26%), Positives = 91/196 (46%)
Query: 354 ETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGP 413
E + ++ L ++ + L I V S LK LF F +Q + VE+C++L P
Sbjct: 654 EELGFADLEYLENLTTLGI-TVLSLETLKTLFEFGALHK--HIQHLHVEECNELLYFNLP 710
Query: 414 DMEKPPTTQGFIEINAEDDPVHQVT--------FPRLEELELVSLTNIKKLWSDQFQGIY 465
+ + I + D + VT P LE L L SL N+ ++W +
Sbjct: 711 SLTNHGRNLRRLSIKSCHDLEYLVTPADFENDWLPSLEVLTLHSLHNLTRVWGNSVSQD- 769
Query: 466 CCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVF 525
C +N+ + + C++LK + S V L +L+ +E+ +CR IE +++ ++ +F
Sbjct: 770 CLRNIRCINISHCNKLK---NVSWVQKLPKLEVIELFDCREIEELISEHESPSVEDPTLF 826
Query: 526 PKLHYLSLHWLPKLSS 541
P L L LP+L+S
Sbjct: 827 PSLKTLRTRDLPELNS 842
Score = 114 (45.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 110 LQTLCLDWCELADIA-AIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEV 168
L+ L L + + +I +I L +L LS++ + I+ LP E+G L +L+ LDL +L+
Sbjct: 560 LRVLDLSFTSITEIPLSIKYLVELYHLSMSGTKISVLPQELGNLRKLKHLDLQRTQFLQT 619
Query: 169 IAPNVISKLSQLEELYMGNGFSGWE 193
I + I LS+LE L + ++GWE
Sbjct: 620 IPRDAICWLSKLEVLNLYYSYAGWE 644
Score = 114 (45.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 49/198 (24%), Positives = 88/198 (44%)
Query: 1 MHDVIHVVAVSIATEERMFNV-----PNVADLEKKMEETIQKDPIAISLPHRDIQELPER 55
MH+V+ A+ +A+E+ + P++ E E + + ISL IQ LPE+
Sbjct: 471 MHNVVRSFALWMASEQGTYKELILVEPSMGHTEAPKAEN-WRQALVISLLDNRIQTLPEK 529
Query: 56 LQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFXXXXXXXXXXXXXXXXNLQTLCL 115
L CP L +L + + ++ FF M L+VL L L +
Sbjct: 530 LICPKLTTLMLQ-QNSSLKKIPTGFFMHMPVLRVLDLSFTSITEIPLSIKYLVELYHLSM 588
Query: 116 DWCELADIAA-IGQLKKLEILSLAYSNINQ-LPVE-IGQLTRLQLLDL--SNCWW-LEVI 169
+++ + +G L+KL+ L L + Q +P + I L++L++L+L S W L+
Sbjct: 589 SGTKISVLPQELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQSF 648
Query: 170 APNVISKLSQLEELYMGN 187
+ +L + Y+ N
Sbjct: 649 GEDEAEELGFADLEYLEN 666
Score = 69 (29.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 38/170 (22%), Positives = 73/170 (42%)
Query: 431 DDPVHQVTFPRLEELE--------LVSLTNIKKLWSDQFQGIYCCQNLTKVTVWSCHRLK 482
+D ++ F LE LE ++SL +K L+ +F ++ +++ + V C+ L
Sbjct: 650 EDEAEELGFADLEYLENLTTLGITVLSLETLKTLF--EFGALH--KHIQHLHVEECNELL 705
Query: 483 YLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPKLSSF 542
Y S+ N L+ L I++C +E +V E P L L+LH L L+
Sbjct: 706 YFNLPSLTNHGRNLRRLSIKSCHDLEYLVTPADF----ENDWLPSLEVLTLHSLHNLTRV 761
Query: 543 ---ASPEDVIHTEMQPQSLFDEKVR-------LPSLEVLHISEADKLRKI 582
+ +D + K++ LP LEV+ + + ++ ++
Sbjct: 762 WGNSVSQDCLRNIRCINISHCNKLKNVSWVQKLPKLEVIELFDCREIEEL 811
Score = 65 (27.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 565 LPSLEVLHISEADKLRKIWHHQXXXXXXXXXXXXXISGCNNLLNI 609
LPSLEVL + L ++W + IS CN L N+
Sbjct: 744 LPSLEVLTLHSLHNLTRVWGNSVSQDCLRNIRCINISHCNKLKNV 788
Score = 65 (27.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 311 PRLKRLLVTDCSEILHIVGSVRRVRCE---VFPLLEALSLMFLTNLETICYSQLREDQSF 367
P+L+ + + DC EI ++ E +FP L+ L L L +I S+ SF
Sbjct: 795 PKLEVIELFDCREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSRF----SF 850
Query: 368 SNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVED 403
+ + + +C ++K L F + + L V E+
Sbjct: 851 QKVETLVITNCPRVKKL-PFQERRTQMNLPTVYCEE 885
Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 160 LSNCWWLEVIAPNVIS-KLSQLEELYMGNGF 189
L +C+ + P S ++ QL E ++G GF
Sbjct: 404 LRSCFLYCALFPEEHSIEIEQLVEYWVGEGF 434
>TAIR|locus:2136447 [details] [associations]
symbol:AT4G27190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 PROSITE:PS51450
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 EMBL:AL035680 EMBL:AL161566 GO:GO:0043531
GO:GO:0017111 eggNOG:KOG4658 EMBL:DQ446871 IPI:IPI00536711
PIR:T06049 RefSeq:NP_194449.1 UniGene:At.65425
ProteinModelPortal:Q9T048 SMR:Q9T048 PRIDE:Q9T048
EnsemblPlants:AT4G27190.1 GeneID:828827 KEGG:ath:AT4G27190
TAIR:At4g27190 HOGENOM:HOG000091014 InParanoid:Q9T048 OMA:WIMSSSQ
PhylomeDB:Q9T048 ProtClustDB:CLSN2686073 Genevestigator:Q9T048
Uniprot:Q9T048
Length = 985
Score = 143 (55.4 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 54/205 (26%), Positives = 95/205 (46%)
Query: 1 MHDVIHVVAV---SIATEERMFNVPNVADLEKKMEETIQKDPIAISLPHRDIQELPERLQ 57
MHDV+ A+ S + ++ V + L+ ++ + +SL + ++ LP+ ++
Sbjct: 462 MHDVVRDFAIWIMSSSQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVE 521
Query: 58 --CPNLQLFLLYTEGNGPM-QVSDHFFEGMEGLKVLQFXXXXXXXXXX-XXXXXXNLQTL 113
C + LL +GN + +V F + L++L +L +L
Sbjct: 522 EFCVKTSVLLL--QGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSL 579
Query: 114 CLDWC-ELADIAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPN 172
L C +L + ++ L KLE+L L ++I + P + +L R + LDLS LE I
Sbjct: 580 FLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPAR 639
Query: 173 VISKLSQLEELYMGNGFSGWEKVEG 197
V+S+LS LE L M + W V+G
Sbjct: 640 VVSRLSSLETLDMTSSHYRWS-VQG 663
Score = 116 (45.9 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 56/228 (24%), Positives = 105/228 (46%)
Query: 267 IKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHEL-DDGEGFPRLKRL----LVTDC 321
I +++ Q + G LL T L L +G+++++ +L D +GF LK L ++ +
Sbjct: 729 ISHLNVSQVSIG--WLLAYTTSLALNHCQGIEAMMKKLVSDNKGFKNLKSLTIENVIINT 786
Query: 322 SEILHIVGS-VRRVRCEVFPLLEALSLMFL--TNLETICYSQLREDQSFSNLRIINVDSC 378
+ + +V + + ++ LL L + L +LET Q L+II + C
Sbjct: 787 NSWVEMVSTNTSKQSSDILDLLPNLEELHLRRVDLETFSELQTHLGLKLETLKIIEITMC 846
Query: 379 RKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQVT 438
RKL+ L + L+++++ CD L+ + + P F+ P +V
Sbjct: 847 RKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQP----FV-------PNLRVL 895
Query: 439 FPRLEEL-ELVSLTNIKKLWS--DQFQGIYCCQ-NLTKVTVWSCHRLK 482
+L L LVS+ N ++W +Q + I+C Q N ++ +C R+K
Sbjct: 896 --KLRNLPNLVSICNWGEVWECLEQVEVIHCNQLNCLPISS-TCGRIK 940
Score = 64 (27.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/107 (26%), Positives = 44/107 (41%)
Query: 440 PRLEELEL--VSLTNIKKLWSDQFQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQ 497
P LEEL L V L +L + G+ + L + + C +L+ L ++ L+
Sbjct: 809 PNLEELHLRRVDLETFSELQTHL--GLKL-ETLKIIEITMCRKLRTLLDKRNFLTIPNLE 865
Query: 498 HLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPKLSSFAS 544
+EI C S++ + F P L L L LP L S +
Sbjct: 866 EIEISYCDSLQNLHEALLY--HQPF--VPNLRVLKLRNLPNLVSICN 908
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 499 LEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPKLSSFASPEDVIHTEMQPQSL 558
L + +C+ IE ++ + K F L L++ + + + S +++ T QS
Sbjct: 749 LALNHCQGIEAMMKKLV----SDNKGFKNLKSLTIENV--IINTNSWVEMVSTNTSKQSS 802
Query: 559 FDEKVRLPSLEVLHISEAD 577
D LP+LE LH+ D
Sbjct: 803 -DILDLLPNLEELHLRRVD 820
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 556 QSLFDEK--VRLPSLEVLHISEADKLRKI 582
++L D++ + +P+LE + IS D L+ +
Sbjct: 850 RTLLDKRNFLTIPNLEEIEISYCDSLQNL 878
>TAIR|locus:2131689 [details] [associations]
symbol:AT4G27220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
EMBL:AL161566 eggNOG:COG4886 GO:GO:0043531 HOGENOM:HOG000091014
ProtClustDB:CLSN2686073 EMBL:AL030978 EMBL:DQ446872 IPI:IPI00548786
PIR:T05746 RefSeq:NP_194452.1 UniGene:At.65426
ProteinModelPortal:O81825 SMR:O81825 PRIDE:O81825
EnsemblPlants:AT4G27220.1 GeneID:828830 KEGG:ath:AT4G27220
TAIR:At4g27220 InParanoid:O81825 OMA:LAINIMA PhylomeDB:O81825
ArrayExpress:O81825 Genevestigator:O81825 Uniprot:O81825
Length = 919
Score = 192 (72.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 100/414 (24%), Positives = 174/414 (42%)
Query: 1 MHDVIHVVAV-SIATEERMFNVPNVAD--LEKKMEETIQKDPIAISLPHRDIQELPERLQ 57
MHDV+ A+ ++++ F+ +A L + ++ +SL ++ LP +
Sbjct: 431 MHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNV- 489
Query: 58 CPNLQLFLLYTEGNGPM-QVSDHFFEGMEGLKVLQFXXXXXXXXXXXXXXXXNLQTLCLD 116
++ +L +GN + +V + F + L++L +L++L L
Sbjct: 490 IEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLR 549
Query: 117 WCE-LADIAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVIS 175
C+ L ++ ++ L KL+ L L S I +LP + L+ L+ + +SN + L+ I I
Sbjct: 550 NCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTIL 609
Query: 176 KLSQLEELYM-GNGFS-GWEKVEGGSNASXXXXXXXXXXXXXXXXVPDAEILPPDFVSVE 233
+LS LE L M G+ +S G + E A+ + D +F S+
Sbjct: 610 QLSSLEVLDMAGSAYSWGIKGEEREGQATLDEVTCLPHLQFLAIKLLDVLSFSYEFDSLT 669
Query: 234 LQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIKKVSILQENDGTKMLLQRTEDLWLET 293
+ K + F P+ S I V++ + G LLQ L L
Sbjct: 670 KRLTKFQF------LFSPIRSVSPPGTGEGCLAISDVNVSNASIG--WLLQHVTSLDLNY 721
Query: 294 LEGVQSVVHEL--DDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLT 351
EG+ + L F +K L + + G ++ ++FP LE LSL +
Sbjct: 722 CEGLNGMFENLVTKSKSSFVAMKALSIHYFPSLSLASGCESQL--DLFPNLEELSLDNV- 778
Query: 352 NLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFS-MAKNLLRLQKVKVEDC 404
NLE+I L+++ V CR+LK LFS +A L LQ++KV C
Sbjct: 779 NLESIGELNGFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSC 832
>TAIR|locus:2205824 [details] [associations]
symbol:AT1G27170 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006952 "defense response" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000157
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 Pfam:PF01582
PRINTS:PR00364 PROSITE:PS50104 SMART:SM00255 GO:GO:0016021
EMBL:CP002684 GO:GO:0009506 GO:GO:0009507 GO:GO:0007165
GO:GO:0006952 GO:GO:0043531 SUPFAM:SSF52200 IPI:IPI00547789
RefSeq:NP_174037.3 UniGene:At.47565 ProteinModelPortal:F4HR53
SMR:F4HR53 PRIDE:F4HR53 EnsemblPlants:AT1G27170.1 GeneID:839606
KEGG:ath:AT1G27170 Uniprot:F4HR53
Length = 1384
Score = 120 (47.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 47/150 (31%), Positives = 65/150 (43%)
Query: 42 ISLPHRDIQELPERL-QCPNLQLF-LLYTEGNGPMQVSDHFFEGMEGLKVLQFXXXXXXX 99
I L R +L E L L+L L+ G + V M LK L
Sbjct: 720 IHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKN 779
Query: 100 XXXXXXXXXNLQTLCLDWCELADIA-AIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLL 158
NL+ L L C++ ++ IG LK LE L L + + LP IG L LQ L
Sbjct: 780 LPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDL 839
Query: 159 DLSNCWWLEVIAPNVISKLSQLEELYMGNG 188
L C L I P+ I++L L++L++ NG
Sbjct: 840 HLVRCTSLSKI-PDSINELKSLKKLFI-NG 867
Score = 65 (27.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 48/205 (23%), Positives = 86/205 (41%)
Query: 325 LHIVGSVRRVRCEVFPLLEA----LSLMFLTNLETICYSQLRED-QSFSNLRIINVDSCR 379
LH + + C+ L + ++ NLE +L E+ L + + +C+
Sbjct: 927 LHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCK 986
Query: 380 KLKYL-FSFSMAKNLLRLQKVKV------EDCDDLKMIIGPDMEKPPT---TQGFIEINA 429
LK L SF K+L RL + E +L ++ +M K P ++ + +
Sbjct: 987 MLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTS 1046
Query: 430 EDDPVHQV--TFPRL---EELELVSLTNIKKLWSDQFQGIYCCQNLTKVTVWSCHRLKYL 484
E+ +V +F +L EEL+ S K+ D + + C L K+ + + Y
Sbjct: 1047 EEPRFVEVPNSFSKLLKLEELDACSWRISGKI-PDDLEKLSC---LMKLNLGN----NYF 1098
Query: 485 FSY-SMVNSLGQLQHLEIRNCRSIE 508
S S + L LQ L +R+CR ++
Sbjct: 1099 HSLPSSLVKLSNLQELSLRDCRELK 1123
>TAIR|locus:2175075 [details] [associations]
symbol:AT5G41750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0007165
"signal transduction" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] InterPro:IPR000157 InterPro:IPR000767
InterPro:IPR002182 InterPro:IPR003593 Pfam:PF00931 Pfam:PF01582
PRINTS:PR00364 PROSITE:PS50104 SMART:SM00255 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0007165 GO:GO:0006952
GO:GO:0043531 GO:GO:0005622 GO:GO:0017111 InterPro:IPR011713
Pfam:PF07725 SUPFAM:SSF52200 HOGENOM:HOG000064702
ProtClustDB:CLSN2686200 EMBL:AB025635 IPI:IPI00547590
RefSeq:NP_198990.3 RefSeq:NP_851117.2 UniGene:At.7150
ProteinModelPortal:Q9LSX5 SMR:Q9LSX5 STRING:Q9LSX5 PRIDE:Q9LSX5
EnsemblPlants:AT5G41750.1 EnsemblPlants:AT5G41750.2 GeneID:834178
KEGG:ath:AT5G41750 TAIR:At5g41750 InParanoid:Q9LSX5 OMA:IDRGQTI
PhylomeDB:Q9LSX5 Genevestigator:Q9LSX5 Uniprot:Q9LSX5
Length = 1068
Score = 99 (39.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 109 NLQTLCLDWC-ELADIAAIGQLKKLEILSLAY-SNINQLPVEIGQLTRLQLLDLSNCWWL 166
NL+++ + + L +I + + LEILSL + ++ +LP I L +L++L++ NC L
Sbjct: 627 NLKSIDMSFSYSLKEIPNLSKATNLEILSLEFCKSLVELPFSILNLHKLEILNVENCSML 686
Query: 167 EVIAPNVISKLSQLEELYM 185
+VI N+ L+ LE L M
Sbjct: 687 KVIPTNI--NLASLERLDM 703
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 291 LETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHI-VGSVRRVRCEVFPLLEALSLMF 349
L T + S + +L+ G+ V S + H+ +GS R V P + +L +++
Sbjct: 709 LRTFPDISSNIKKLNLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSL-VLW 767
Query: 350 LTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKM 409
+N+E+I S + + L +NV+SCRKLK + + LQ + DC LK
Sbjct: 768 KSNIESIPESII----GLTRLDWLNVNSCRKLKSILGLPSS-----LQDLDANDCVSLKR 818
Query: 410 I 410
+
Sbjct: 819 V 819
>TAIR|locus:2008510 [details] [associations]
symbol:AT1G61190 "AT1G61190" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006952
"defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931
PRINTS:PR00364 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 HOGENOM:HOG000238348
EMBL:AC002294 IPI:IPI00531576 PIR:G96637 RefSeq:NP_176314.1
UniGene:At.36514 UniGene:At.71478 ProteinModelPortal:O22727
SMR:O22727 PaxDb:O22727 PRIDE:O22727 EnsemblPlants:AT1G61190.1
GeneID:842412 KEGG:ath:AT1G61190 TAIR:At1g61190 eggNOG:NOG249426
InParanoid:O22727 OMA:FQQKAFN PhylomeDB:O22727
ProtClustDB:CLSN2681834 Genevestigator:O22727 GermOnline:AT1G61190
Uniprot:O22727
Length = 967
Score = 91 (37.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 51/189 (26%), Positives = 81/189 (42%)
Query: 1 MHDVIHVVAVSIATEERMFNVPNVADLEKKMEETIQ-KDPIAI---SLPHRDIQELPERL 56
MHDV+ +A+ IA++ V + E + KD A+ SL +I+E+
Sbjct: 475 MHDVVREMALWIASDFGKQKENYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIEEITCES 534
Query: 57 QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFXXXXXXXXX-XXXXXXXNLQTLCL 115
+C +L L+ + N +S F M+ L VL +LQ L L
Sbjct: 535 KCS--ELTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDL 592
Query: 116 DWCELADI-AAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVI 174
W + + + +LKKL L+L ++ +L I ++RL L L WL + NV
Sbjct: 593 SWTRIEQLPVGLKELKKLIFLNLCFTE--RL-CSISGISRL--LSLR---WLSLRESNVH 644
Query: 175 SKLSQLEEL 183
S L+EL
Sbjct: 645 GDASVLKEL 653
Score = 86 (35.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 464 IYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTT-TLGGRDEF 522
I C NLT + + CH +K L + + L +L+IR+ R + ++N +
Sbjct: 738 IPCFTNLTGLIIMKCHSMKDL---TWILFAPNLVNLDIRDSREVGEIINKEKAINLTSII 794
Query: 523 KVFPKLHYLSLHWLPKLSS-FASP 545
F KL L L+ LPKL S + SP
Sbjct: 795 TPFQKLERLFLYGLPKLESIYWSP 818
>MGI|MGI:1333744 [details] [associations]
symbol:Gp1ba "glycoprotein 1b, alpha polypeptide"
species:10090 "Mus musculus" [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0007596 "blood coagulation"
evidence=ISO;IMP] [GO:0007599 "hemostasis" evidence=IMP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031362 "anchored to external side of
plasma membrane" evidence=IDA] [GO:0042730 "fibrinolysis"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1333744
GO:GO:0005887 GO:GO:0007596 GO:GO:0042730 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0000902 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 EMBL:AL596117 CTD:2811 HOVERGEN:HBG051790 KO:K06261
OrthoDB:EOG402WSZ EMBL:U91967 IPI:IPI00136164 RefSeq:NP_034456.2
UniGene:Mm.377085 PDB:1K15 PDBsum:1K15 ProteinModelPortal:O35930
SMR:O35930 STRING:O35930 PhosphoSite:O35930 PaxDb:O35930
PRIDE:O35930 Ensembl:ENSMUST00000055184 Ensembl:ENSMUST00000108551
GeneID:14723 KEGG:mmu:14723 eggNOG:NOG303231
GeneTree:ENSGT00690000102197 HOGENOM:HOG000234361 InParanoid:O35930
OMA:VPRAWLL NextBio:286739 PMAP-CutDB:O35930 Bgee:O35930
CleanEx:MM_GP1BA Genevestigator:O35930 Uniprot:O35930
Length = 734
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 109 NLQTLCLDWCELADIAAIGQLKKLEILSLAYSNINQLPVEIG-QLTRLQLLDLS-NCWWL 166
+L L LD CEL + G+L KLE L L+++N+ LP +G L L LD+S N L
Sbjct: 72 HLTYLYLDRCELTSLQTNGKLIKLENLDLSHNNLKSLP-SLGWALPALTTLDVSFNK--L 128
Query: 167 EVIAPNVISKLSQLEELYMGN 187
++P V+ LSQL+ELY+ N
Sbjct: 129 GSLSPGVLDGLSQLQELYLQN 149
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 99 (39.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 45/156 (28%), Positives = 70/156 (44%)
Query: 19 FNVPNVADLEKK---MEETIQKDP---IAISLPHRDIQELPERLQCPNLQLFL-LYTEGN 71
F++ +V + KK + E I P ++L H +IQ LP NL + L E N
Sbjct: 79 FDIHHVLCIRKKITNLTEAISDIPRYTTHLNLTHNEIQVLPP-WSFTNLSALVDLRLEWN 137
Query: 72 GPMQVSDHFFEGMEGLKVLQFXXXXXXXXXXXXXXXXNLQTLCLDWCELADIA--AIGQL 129
++ + F G+E L +L +L+TL L ++ I A L
Sbjct: 138 SIWKIDEGAFRGLENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPL 197
Query: 130 KKLEILSLAYSNINQLP--VEIGQ-LTRLQLLDLSN 162
KL+ LSL+ +NI+ +E Q L L+ LDL+N
Sbjct: 198 IKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTN 233
Score = 72 (30.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 56/252 (22%), Positives = 105/252 (41%)
Query: 304 LDDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQLRE 363
L+ + P L+RL +T+ S I+++ S R + E L L N + L
Sbjct: 217 LEAVQHLPCLERLDLTNNS-IMYLDHSPRSLVSLTHLSFEGNKLREL-NFSALSLPNLTN 274
Query: 364 -DQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQ 422
S + ++I + L L S +++ +++L+ + + +L+ + D+
Sbjct: 275 LSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSAKHLQNLRAM---DLSNWELRH 331
Query: 423 GFIEINAEDDPVHQV-TFPRLEELELVSLTNIKKLWSDQFQGIYCCQNLTKVTVWSCHRL 481
G +++ H + P+LE L V N+ ++ + + C L + + L
Sbjct: 332 GHLDMKTV---CHLLGNLPKLETL--VFQKNVTN--AEGIKQLAKCTRLLFLDLGQNSDL 384
Query: 482 KYLFSYSMVNSLGQLQHLEIRNC-------RSIEGVVNTTTLG-GRDEFKVFPKLHYLSL 533
YL + S N+L LQ L + C R+ + N T+L ++FK FP + L
Sbjct: 385 IYL-NDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPL 443
Query: 534 HWLPKLSSFASP 545
L LS +P
Sbjct: 444 KHLEFLSLSRNP 455
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 620 575 0.00080 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 622 (66 KB)
Total size of DFA: 328 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.23u 0.13s 46.36t Elapsed: 00:00:02
Total cpu time: 46.23u 0.13s 46.36t Elapsed: 00:00:02
Start: Sat May 11 13:36:20 2013 End: Sat May 11 13:36:22 2013